FvH4_3g08000

Protein CHUP1, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0012111
Physical Location & Seq
Reverse (-)
4711895 .. 4715838
3944 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g08000.t1

Sequence Viewer

Length: 1833 bp
ATGGTAGCTGGTAAGGTGAGAGTAGCAATGGGGCTACAGAAATCCCCATCCCCCGCGCGTAGTACTAAACCAGAGCCCCCACCTCCGAAGCCGCCGTCGCCGTCAGTCAGCTCCGGCAAGTCTTCCCAGAAGGCGGTGTTCTCCCGCTCCTTCGGCGTTTACTTCCCGCGCTCCTCCGCGCAGGTCCAGCCGAAGCCGCCGGACGTGGCGGAGCTGCTCCGGCTGGTGGAGGAGCTCCGGGAGCGGGAGTCGAGGCTGAAGACGGAGCTGCTGGAGCACAAGCTGATGAAGGAGTCGGTGGCGATTATTCCGGTGCTGGAGAACGAGATCTTCATGAAAGACGAGGAGATTGGGAGGGCTTGCAAAAAAATCGAGACGTTGGAAACCGAGAACATGAGGCTGAGGAGCGAGGCGGAGTTGGTTAGAGCAGAGCTGGAGGAGAGCGAGAGAAAGGTGGAGGCAATGGAGGCGAAAATGAAGGCCATCGAAGCGGAGATTTCGGAGATGAAGAAAACGGCGTCCGATCAAAGTGACGAGCTGTTGCTTTCGTCGTCGCAGAGATTTCAAGGACTCATGGAGGTTTCGGTCAGGTCGAATCTGATCAAGAATTTGAAGAAGGGAGTGAAGTGTACCGAGAGCCAGCAAAAGCTGGAACGCTCGGATTCGAAGAGAGAGGAGGTTGAAATTGAAGTGCCGAGATCACACTCCAGGTGTAACTCGGAGGATTTCGCCGAGTCGACTCTGTCCGCTACTGCTCTCAGATCTCGGATCCCTAGGGTTCCGAAACCGCCGCCGAGACCGTCGTCGTCGTCGTCCAACGGTGAAAACAAGGGCTTAGCAACAGGAGAGCAAGCCATTCCACCTCCGCCACCGCCGCCGCCGAGTCAGGCGAAGGTAGCACCTCCACCGCCGCCACCGCCGTCGCGATCGGCGCCTCCTCCGCCGCCACCGCTGCCGAAGGGGAGGAAGACGGTGACGGAGAAGGTGAGTCGGGTGCCGGAGGTTGTGGAGTTTTACCACTCTCTGATGAGGAGGGACTCTCGGAGAGACTCCGGTAGTGGAGCTTCCGACGCGCCGGCGACCGCTAATGCCCGTGACATGATCGGAGAGATCGAGAACCGGTCTGCTCACTTGCTTGCTATCAAAACGGATGTAGAAACCCAGGGAGATTTCATAAGGTTTTTGATCAAAGAAGTCGAGAATGCAGCGTTTACAGACATTAACGATGTGGTGCCTTTTGTAAAATGGCTGGACGATGAGCTTTCTTATTTGGTGGATGAAAGAGCTGTGCTTAAGCATTTTGATTGGCCGGAGAAGAAGGCTGACGCCCTGCGTGAGGCCGCATTCGGGTATTGCGATCTTAAGAAGCTCCAAACAGAGGCTTCTTCATTTCCTGACCATTCCCGCCAGCCCTGCGGTCCAACCCTTAAAAAGATGCAGGCTTTGCTTGAAAAATTGGAGCATGGTGTTTACAACCTTTCGAGGATGAGAGAATCCGCGACGAAAAGATACAAAGTTTTCCAGATTCCTACTAATTGGATGCTGGATACCGAGTTTGTAAGCCAGATCAAGCTGGCATCCGTAAAATTGGCAATGAAGTACATGAAGAGAGTCTCTGCGGAGCTGGAAGTGGTAGGTGGTGGTGGCCCTGAAGAAGAAGAGCTGATAGTTCAAGGCGTTAGATTTGCCTTCCGTGTGCATCAGTTTGCTGGTGGTTTTGATGCAGAAACGATGAGAGCTTTCCAGGTATTGAGAGACAAAGTGAGATCATGCCATGTACAATGCCAAAACCAGCAACAACAGAAATTTGTTTGCAAGTCCACACCATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

611

Amino Acids

68.21

Weight (kDa)

8.81

Isoelectric Point (pI)

64.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18570 AT4G18570
fragaria_vesca FvH4_3g08000
malus_domestica MD05G1303500.v1.1 MD10G1282700.v1.1
prunus_persica Prupe.4G059200_v2.0.a1
pyrus_communis pycom05g28050 pycom10g23580
rosa_chinensis RchiOBHm_Chr5g0010311
rosa_laevigata RLG00000031736
rosa_multiflora Rmu_co8025906.1_g000001 Rmu_sc0012578.1_g000002
rosa_roxburghii Rroxscaffold_1G00065940
rosa_rugosa Rorug04G0450100
rosa_samantha Rh5AG081200 Rh5BG076100 Rh5CG089400 Rh5DG076800
rosa_wichuraiana Rw5G007520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 172
AccB1I GGYRCC 3 cut(s) 931, 994, 1231
AccBSI CCGCTC 2 cut(s) 147, 244
AccI GTMKAC 1 cut(s) 737
AccII CGCG 7 cut(s) 56, 58, 169, 179, 925, 1073, 1499
AclWI GGATC 2 cut(s) 763, 776
AcoI YGGCCR 1 cut(s) 1307
AcsI RAATTY 2 cut(s) 607, 1805
AcuI CTGAAG 2 cut(s) 278, 1671
AcyI GRCGYC 3 cut(s) 518, 932, 1326
AfaI GTAC 4 cut(s) 64, 631, 1601, 1779
AfiI CCNNNNNNNGG 6 cut(s) 133, 226, 244, 1336, 1347, 1378
AflII CTTAAG 2 cut(s) 1292, 1361
AgeI ACCGGT 1 cut(s) 1119
AgsI TTSAA 6 cut(s) 566, 613, 683, 689, 1451, 1673
AjiI CACGTC 1 cut(s) 205
AjnI CCWGG 3 cut(s) 707, 1161, 1743
Alw21I GWGCWC 2 cut(s) 237, 279
Alw26I GTCTC 5 cut(s) 368, 790, 1041, 1618, 1749
AlwI GGATC 2 cut(s) 763, 776
AoxI GGCC 4 cut(s) 480, 1307, 1338, 1645
ApeKI GCWGC 4 cut(s) 214, 268, 952, 1205
ApoI RAATTY 2 cut(s) 607, 1805
ArsI GACNNNNNNTTYG 2 cut(s) 80, 112
AsiGI ACCGGT 1 cut(s) 1119
AspA2I CCTAGG 1 cut(s) 773
AspLEI GCGC 5 cut(s) 58, 171, 181, 934, 1075
AspS9I GGNCC 3 cut(s) 184, 1418, 1646
AsuC2I CCSGG 1 cut(s) 239
AsuHPI GGTGA 4 cut(s) 28, 833, 985, 997
AsuII TTCGAA 1 cut(s) 665
AvaII GGWCC 2 cut(s) 184, 1418
AvrII CCTAGG 1 cut(s) 773
BamHI GGATCC 1 cut(s) 768
BanI GGYRCC 3 cut(s) 931, 994, 1231
BanII GRGCYC 2 cut(s) 78, 237
BarI GAAGNNNNNNTAC 2 cut(s) 1048, 1080
BbsI GAAGAC 3 cut(s) 114, 266, 974
Bbv12I GWGCWC 2 cut(s) 237, 279
BbvCI CCTCAGC 1 cut(s) 401
BbvI GCAGC 4 cut(s) 201, 255, 939, 1217
BccI CCATC 2 cut(s) 55, 491
BceAI ACGGC 4 cut(s) 79, 85, 531, 904
BcgI CGANNNNNNTGC 2 cut(s) 352, 386
BciT130I CCWGG 3 cut(s) 709, 1163, 1745
BciVI GTATCC 1 cut(s) 1540
BclI TGATCA 2 cut(s) 600, 1185
BcnI CCSGG 1 cut(s) 239
BcoDI GTCTC 5 cut(s) 368, 790, 1041, 1618, 1749
BfaI CTAG 1 cut(s) 774
BfmI CTRYAG 1 cut(s) 35
BfoI RGCGCY 1 cut(s) 935
BfrI CTTAAG 2 cut(s) 1292, 1361
BfuAI ACCTGC 1 cut(s) 172
BfuI GTATCC 1 cut(s) 1540
BglII AGATCT 2 cut(s) 327, 761
BlnI CCTAGG 1 cut(s) 773
BlpI GCTNAGC 1 cut(s) 835
BmcAI AGTACT 1 cut(s) 64
Bme1390I CCNGG 4 cut(s) 239, 709, 1163, 1745
Bme18I GGWCC 2 cut(s) 184, 1418
BmgBI CACGTC 1 cut(s) 205
BmgT120I GGNCC 3 cut(s) 184, 1418, 1646
BmiI GGNNCC 5 cut(s) 770, 780, 933, 996, 1233
BmrFI CCNGG 4 cut(s) 239, 709, 1163, 1745
BmsI GCATC 5 cut(s) 1425, 1530, 1586, 1708, 1711
BoxI GACNNNNGTC 1 cut(s) 802
BpiI GAAGAC 3 cut(s) 114, 266, 974
BplI GAGNNNNNCTC 2 cut(s) 1024, 1056
BpmI CTGGAG 4 cut(s) 293, 338, 455, 691
Bpu10I CCTNAGC 1 cut(s) 401
Bpu1102I GCTNAGC 1 cut(s) 835
Bpu14I TTCGAA 1 cut(s) 665
BpuMI CCSGG 1 cut(s) 239
BsaHI GRCGYC 3 cut(s) 518, 932, 1326
BsaI GGTCTC 1 cut(s) 790
BsaJI CCNNGG 3 cut(s) 773, 1161, 1162
BsaWI WCCGGW 3 cut(s) 310, 1052, 1119
BsaXI ACNNNNNCTCC 2 cut(s) 233, 263
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 226, 244, 1336, 1347, 1378
Bse118I RCCGGY 2 cut(s) 1075, 1119
Bse3DI GCAATG 3 cut(s) 33, 468, 1599
BseBI CCWGG 3 cut(s) 709, 1163, 1745
BseDI CCNNGG 3 cut(s) 773, 1161, 1162
BseGI GGATG 6 cut(s) 47, 1156, 1282, 1491, 1545, 1577
BseLI CCNNNNNNNGG 6 cut(s) 133, 226, 244, 1336, 1347, 1378
BseMI GCAATG 3 cut(s) 33, 468, 1599
BseMII CTCAG 2 cut(s) 392, 772
BseRI GAGGAG 8 cut(s) 163, 245, 359, 418, 452, 689, 927, 1045
BseXI GCAGC 4 cut(s) 201, 255, 939, 1217
Bsh1236I CGCG 7 cut(s) 56, 58, 169, 179, 925, 1073, 1499
Bsh1285I CGRYCG 2 cut(s) 929, 1083
BshFI GGCC 4 cut(s) 482, 1309, 1340, 1647
BshNI GGYRCC 3 cut(s) 931, 994, 1231
BshTI ACCGGT 1 cut(s) 1119
BsiEI CGRYCG 2 cut(s) 929, 1083
BsiHKAI GWGCWC 2 cut(s) 237, 279
BslFI GGGAC 1 cut(s) 1049
BslI CCNNNNNNNGG 6 cut(s) 133, 226, 244, 1336, 1347, 1378
BsmAI GTCTC 5 cut(s) 368, 790, 1041, 1618, 1749
BsmBI CGTCTC 1 cut(s) 368
BsmFI GGGAC 1 cut(s) 1049
BsmI GAATGC 2 cut(s) 1207, 1343
BsnI GGCC 4 cut(s) 482, 1309, 1340, 1647
Bso31I GGTCTC 1 cut(s) 790
Bsp119I TTCGAA 1 cut(s) 665
Bsp1286I GDGCHC 3 cut(s) 78, 237, 279
Bsp1407I TGTACA 1 cut(s) 1777
Bsp1720I GCTNAGC 1 cut(s) 835
Bsp68I TCGCGA 1 cut(s) 925
BspANI GGCC 4 cut(s) 482, 1309, 1340, 1647
BspCNI CTCAG 2 cut(s) 393, 771
BspFNI CGCG 7 cut(s) 56, 58, 169, 179, 925, 1073, 1499
BspHI TCATGA 1 cut(s) 333
BspLI GGNNCC 5 cut(s) 770, 780, 933, 996, 1233
BspMI ACCTGC 1 cut(s) 172
BspPI GGATC 2 cut(s) 763, 776
BspQI GCTCTTC 1 cut(s) 1653
BspT104I TTCGAA 1 cut(s) 665
BspT107I GGYRCC 3 cut(s) 931, 994, 1231
BspTI CTTAAG 2 cut(s) 1292, 1361
BspTNI GGTCTC 1 cut(s) 790
BsrBI CCGCTC 2 cut(s) 147, 244
BsrDI GCAATG 3 cut(s) 33, 468, 1599
BsrFI RCCGGY 2 cut(s) 1075, 1119
BsrGI TGTACA 1 cut(s) 1777
BssAI RCCGGY 2 cut(s) 1075, 1119
BssECI CCNNGG 3 cut(s) 773, 1161, 1162
BssNI GRCGYC 3 cut(s) 518, 932, 1326
BssT1I CCWWGG 1 cut(s) 773
Bst2UI CCWGG 3 cut(s) 709, 1163, 1745
Bst4CI ACNGT 3 cut(s) 801, 821, 973
Bst6I CTCTTC 3 cut(s) 662, 1601, 1653
BstACI GRCGYC 3 cut(s) 518, 932, 1326
BstAFI CTTAAG 2 cut(s) 1292, 1361
BstAPI GCANNNNNTGC 1 cut(s) 1444
BstAUI TGTACA 1 cut(s) 1777
BstBI TTCGAA 1 cut(s) 665
BstC8I GCNNGC 8 cut(s) 361, 641, 852, 1077, 1137, 1409, 1440, 1575
BstDEI CTNAG 3 cut(s) 401, 758, 835
BstENI CCTNNNNNAGG 1 cut(s) 1334
BstF5I GGATG 6 cut(s) 47, 1156, 1282, 1491, 1545, 1577
BstFNI CGCG 7 cut(s) 56, 58, 169, 179, 925, 1073, 1499
BstH2I RGCGCY 1 cut(s) 935
BstHHI GCGC 5 cut(s) 58, 171, 181, 934, 1075
BstMAI GTCTC 5 cut(s) 368, 790, 1041, 1618, 1749
BstMCI CGRYCG 2 cut(s) 929, 1083
BstNI CCWGG 3 cut(s) 709, 1163, 1745
BstPAI GACNNNNGTC 1 cut(s) 802
BstSCI CCNGG 4 cut(s) 237, 707, 1161, 1743
BstSFI CTRYAG 1 cut(s) 35
BstUI CGCG 7 cut(s) 56, 58, 169, 179, 925, 1073, 1499
BstV1I GCAGC 4 cut(s) 201, 255, 939, 1217
BstV2I GAAGAC 3 cut(s) 114, 266, 974
BstX2I RGATCY 3 cut(s) 327, 761, 768
BstYI RGATCY 3 cut(s) 327, 761, 768
BsuI GTATCC 1 cut(s) 1540
BsuRI GGCC 4 cut(s) 482, 1309, 1340, 1647
BtrI CACGTC 1 cut(s) 205
BtsCI GGATG 6 cut(s) 47, 1156, 1282, 1491, 1545, 1577
BtuMI TCGCGA 1 cut(s) 925
BveI ACCTGC 1 cut(s) 172
Cac8I GCNNGC 8 cut(s) 361, 641, 852, 1077, 1137, 1409, 1440, 1575
CciI TCATGA 1 cut(s) 333
CfoI GCGC 5 cut(s) 58, 171, 181, 934, 1075
Cfr10I RCCGGY 2 cut(s) 1075, 1119
Cfr13I GGNCC 3 cut(s) 184, 1418, 1646
CseI GACGC 3 cut(s) 507, 1079, 1334
Csp6I GTAC 4 cut(s) 63, 630, 1600, 1778
CspAI ACCGGT 1 cut(s) 1119
CviAII CATG 9 cut(s) 334, 394, 574, 1099, 1463, 1603, 1770, 1775, 1827
CviQI GTAC 4 cut(s) 63, 630, 1600, 1778
DdeI CTNAG 3 cut(s) 401, 758, 835
DinI GGCGCC 1 cut(s) 933
EaeI YGGCCR 1 cut(s) 1307
Eam1104I CTCTTC 3 cut(s) 662, 1601, 1653
EarI CTCTTC 3 cut(s) 662, 1601, 1653
EciI GGCGGA 4 cut(s) 224, 428, 855, 930
Ecl136II GAGCTC 1 cut(s) 235
Eco130I CCWWGG 1 cut(s) 773
Eco24I GRGCYC 2 cut(s) 78, 237
Eco31I GGTCTC 1 cut(s) 790
Eco47I GGWCC 2 cut(s) 184, 1418
Eco53kI GAGCTC 1 cut(s) 235
Eco57I CTGAAG 2 cut(s) 278, 1671
EcoICRI GAGCTC 1 cut(s) 235
EcoNI CCTNNNNNAGG 1 cut(s) 1334
EcoRII CCWGG 3 cut(s) 707, 1161, 1743
EcoT14I CCWWGG 1 cut(s) 773
EcoT38I GRGCYC 2 cut(s) 78, 237
EgeI GGCGCC 1 cut(s) 933
EheI GGCGCC 1 cut(s) 933
ErhI CCWWGG 1 cut(s) 773
Esp3I CGTCTC 1 cut(s) 368
FaeI CATG 9 cut(s) 337, 397, 577, 1102, 1466, 1606, 1773, 1778, 1830
FaqI GGGAC 1 cut(s) 1049
FatI CATG 9 cut(s) 333, 393, 573, 1098, 1462, 1602, 1769, 1774, 1826
FauI CCCGC 5 cut(s) 61, 152, 174, 237, 1412
FbaI TGATCA 2 cut(s) 600, 1185
FblI GTMKAC 1 cut(s) 737
FokI GGATG 6 cut(s) 34, 1163, 1289, 1498, 1552, 1564
FriOI GRGCYC 2 cut(s) 78, 237
FspBI CTAG 1 cut(s) 774
GlaI GCGC 5 cut(s) 57, 170, 180, 933, 1074
GsuI CTGGAG 4 cut(s) 293, 338, 455, 691
HaeII RGCGCY 1 cut(s) 935
HaeIII GGCC 4 cut(s) 482, 1309, 1340, 1647
HgaI GACGC 3 cut(s) 507, 1079, 1334
HhaI GCGC 5 cut(s) 58, 171, 181, 934, 1075
Hin1I GRCGYC 3 cut(s) 518, 932, 1326
Hin1II CATG 9 cut(s) 337, 397, 577, 1102, 1466, 1606, 1773, 1778, 1830
Hin6I GCGC 5 cut(s) 56, 169, 179, 932, 1073
HinP1I GCGC 5 cut(s) 56, 169, 179, 932, 1073
HincII GTYRAC 1 cut(s) 738
HindII GTYRAC 1 cut(s) 738
HphI GGTGA 4 cut(s) 28, 833, 985, 997
Hpy166II GTNNAC 6 cut(s) 160, 630, 738, 1212, 1471, 1821
Hpy188III TCNNGA 8 cut(s) 334, 373, 604, 924, 1114, 1198, 1394, 1522
Hpy8I GTNNAC 6 cut(s) 160, 630, 738, 1212, 1471, 1821
HpyCH4III ACNGT 3 cut(s) 801, 821, 973
HpyCH4IV ACGT 2 cut(s) 204, 377
HpyCH4V TGCA 6 cut(s) 363, 1205, 1438, 1699, 1724, 1815
HpyF3I CTNAG 3 cut(s) 401, 758, 835
HpySE526I ACGT 2 cut(s) 204, 377
Hsp92I GRCGYC 3 cut(s) 518, 932, 1326
Hsp92II CATG 9 cut(s) 337, 397, 577, 1102, 1466, 1606, 1773, 1778, 1830
HspAI GCGC 5 cut(s) 56, 169, 179, 932, 1073
KasI GGCGCC 1 cut(s) 931
KroI GCCGGC 1 cut(s) 1075
KroNI GCCGGC 1 cut(s) 1077
Ksp22I TGATCA 2 cut(s) 600, 1185
LguI GCTCTTC 1 cut(s) 1653
Lsp1109I GCAGC 4 cut(s) 201, 255, 939, 1217
LweI GCATC 5 cut(s) 1425, 1530, 1586, 1708, 1711
MaeI CTAG 1 cut(s) 774
MaeII ACGT 2 cut(s) 204, 377
MaeIII GTNAC 4 cut(s) 530, 713, 973, 1094
MbiI CCGCTC 2 cut(s) 147, 244
MflI RGATCY 3 cut(s) 327, 761, 768
MhlI GDGCHC 3 cut(s) 78, 237, 279
MluCI AATT 6 cut(s) 607, 684, 1454, 1534, 1586, 1805
Mly113I GGCGCC 1 cut(s) 932
MmeI TCCRAC 4 cut(s) 360, 840, 1092, 1445
MreI CGCCGGCG 1 cut(s) 1075
MroNI GCCGGC 1 cut(s) 1075
MseI TTAA 4 cut(s) 1221, 1293, 1362, 1428
MspA1I CMGCKG 1 cut(s) 952
MspCI CTTAAG 2 cut(s) 1292, 1361
MspR9I CCNGG 4 cut(s) 239, 709, 1163, 1745
Mva1269I GAATGC 2 cut(s) 1207, 1343
MvaI CCWGG 3 cut(s) 709, 1163, 1745
MvnI CGCG 7 cut(s) 56, 58, 169, 179, 925, 1073, 1499
NaeI GCCGGC 1 cut(s) 1077
NarI GGCGCC 1 cut(s) 932
NciI CCSGG 1 cut(s) 239
NgoMIV GCCGGC 1 cut(s) 1075
NlaIII CATG 9 cut(s) 337, 397, 577, 1102, 1466, 1606, 1773, 1778, 1830
NlaIV GGNNCC 5 cut(s) 770, 780, 933, 996, 1233
NmeAIII GCCGAG 4 cut(s) 720, 757, 819, 906
NmuCI GTSAC 3 cut(s) 530, 973, 1094
NruI TCGCGA 1 cut(s) 925
NspV TTCGAA 1 cut(s) 665
PagI TCATGA 1 cut(s) 333
PasI CCCWGGG 1 cut(s) 1162
PciSI GCTCTTC 1 cut(s) 1653
PcsI WCGNNNNNNNCGW 4 cut(s) 590, 809, 1110, 1353
PctI GAATGC 2 cut(s) 1207, 1343
PdiI GCCGGC 1 cut(s) 1077
PfeI GAWTC 4 cut(s) 595, 662, 1493, 1525
PflFI GACNNNGTC 1 cut(s) 742
PfoI TCCNGGA 1 cut(s) 237
PinAI ACCGGT 1 cut(s) 1119
Ple19I CGATCG 1 cut(s) 929
PluTI GGCGCC 1 cut(s) 935
PshAI GACNNNNGTC 1 cut(s) 802
Psp124BI GAGCTC 1 cut(s) 237
Psp6I CCWGG 3 cut(s) 707, 1161, 1743
PspGI CCWGG 3 cut(s) 707, 1161, 1743
PspN4I GGNNCC 5 cut(s) 770, 780, 933, 996, 1233
PspPI GGNCC 3 cut(s) 184, 1418, 1646
PsuI RGATCY 3 cut(s) 327, 761, 768
PsyI GACNNNGTC 1 cut(s) 742
PvuI CGATCG 1 cut(s) 929
RruI TCGCGA 1 cut(s) 925
RsaI GTAC 4 cut(s) 64, 631, 1601, 1779
RsaNI GTAC 4 cut(s) 63, 630, 1600, 1778
SacI GAGCTC 1 cut(s) 237
SalI GTCGAC 1 cut(s) 736
SapI GCTCTTC 1 cut(s) 1653
SaqAI TTAA 4 cut(s) 1221, 1293, 1362, 1428
Sau96I GGNCC 3 cut(s) 184, 1418, 1646
ScaI AGTACT 1 cut(s) 64
ScrFI CCNGG 4 cut(s) 239, 709, 1163, 1745
SduI GDGCHC 3 cut(s) 78, 237, 279
SfaNI GCATC 5 cut(s) 1425, 1530, 1586, 1708, 1711
SfcI CTRYAG 1 cut(s) 35
SfoI GGCGCC 1 cut(s) 933
SfuI TTCGAA 1 cut(s) 665
SgrAI CRCCGGYG 1 cut(s) 1075
SinI GGWCC 2 cut(s) 184, 1418
SmlI CTYRAG 2 cut(s) 1292, 1361
SmoI CTYRAG 2 cut(s) 1292, 1361
Sse9I AATT 6 cut(s) 607, 684, 1454, 1534, 1586, 1805
SspDI GGCGCC 1 cut(s) 931
SspMI CTAG 1 cut(s) 774
SstI GAGCTC 1 cut(s) 237
StyD4I CCNGG 4 cut(s) 237, 707, 1161, 1743
StyI CCWWGG 1 cut(s) 773
TaaI ACNGT 3 cut(s) 801, 821, 973
TaiI ACGT 2 cut(s) 207, 380
TaqI TCGA 9 cut(s) 251, 372, 486, 593, 665, 737, 1113, 1197, 1481
TaqII GACCGA 1 cut(s) 574
TasI AATT 6 cut(s) 607, 684, 1454, 1534, 1586, 1805
TatI WGTACW 3 cut(s) 62, 1599, 1777
TauI GCSGC 8 cut(s) 94, 199, 793, 877, 880, 913, 946, 1343
TfiI GAWTC 4 cut(s) 595, 662, 1493, 1525
Tru1I TTAA 4 cut(s) 1221, 1293, 1362, 1428
Tru9I TTAA 4 cut(s) 1221, 1293, 1362, 1428
TseFI GTSAC 3 cut(s) 530, 973, 1094
TseI GCWGC 4 cut(s) 214, 268, 952, 1205
Tsp45I GTSAC 3 cut(s) 530, 973, 1094
TspGWI ACGGA 5 cut(s) 278, 992, 1163, 1570, 1682
Tth111I GACNNNGTC 1 cut(s) 742
Vha464I CTTAAG 2 cut(s) 1292, 1361
VpaK11BI GGWCC 2 cut(s) 184, 1418
XagI CCTNNNNNAGG 1 cut(s) 1334
XapI RAATTY 2 cut(s) 607, 1805
XmaJI CCTAGG 1 cut(s) 773
XmiI GTMKAC 1 cut(s) 737
XspI CTAG 1 cut(s) 774
ZrmI AGTACT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.