Prupe.4G059200_v2.0.a1

Protein CHUP1, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0012111
Physical Location & Seq
Forward (+)
2825394 .. 2829235
3842 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G059200.1

Sequence Viewer

Length: 1827 bp
ATGGTAGCTGGGAAGGTGAGGGCGGCAATGGGGCTGCAAAAATCGCCATCAAATGCGAAACCGGAGACTCCTTCGAAGTCGCCGTCGCCGTCGGTAAGCTCCGGTAAGCTCTCGCAGAAGGCGGTGTTCTCGCGCTCATTTGGCGTGTACTTCCCACGCTCCTCCGCACAGGTCCAGCCTAAGCCGCCGGACGTGACGGAGCTTCTCCGCCTGGTCGAAGAGCTCCGGGAGCGAGAGTCGAGGTTGAAGACGGAGCTTCTCGAGAACAAGCTCTTGAGAGAGTCCGTCGCCATTGTCCCTGTTTTGGAAAACGAGATCCTCAACAAGAGCGAAGACATTGAGCGAGCTTCGAAGCAAATGGAGGCCTTGGAGGCCGAGAACGAGAGGTTGAGAAATCAGGTGGAGGAAGTGAAGTTGATGTTAGAGGAAGAGAGGAGGGAGAGCGAGAAAAAAGTGAAGGCAATGGAGGCTGAGATTTCGGAGTTGAAGAAAACGGGGTCGGATCGTAGCAAAGCGGAGATAAACTTGGAGAGCGACGAGCTTTCGTCGTCGCAGAGATTCCAGGGGCTCATGGAGGTCACCGGAAGGTCCAATCTCATAAAAAACTTAAAGAAGGGAGCCAAATGCGCTGACGTTCATGCAAATCAGGAGAGTCAGAAGCTAGAGCGCTCAGATTCGAAGAGGGAGGAAGCAGAAACGGAGAGACCGAGACACTCGAGGTGTAACTCGGAGGAACTCGCCGAGTCGACTCTGTCTACTATCAGATCTCGCATTCCTAGGGTTCCTAAACCGCCTCCAAGACCATCCACATCCAACGGCGAGAACAAGGCCACAACAGAACAAGCGGTTACATTTCCACCACCTCCGCCACCTCCAACGAGCCAGGCGAAGTCGGTACCTCCACCGCCACCTCCGCCGTCAAGAGCGGCTCCGCCTCCGCCTCCCCCGCCTCCTAAAGGGAGAAGGCCGGCCCCTGCGAAGGTGAGGCGAGTGCCGGAGGTTGTGGAGTTTTACCACTCTCTGATGAGAAGAGACTCTCGCAGAGACTCCGGCAGTGGAGGCTCCGACGCGCCGGCAACCGCAAATGCCCGTGACATGATCGGCGAGATCGAGAACCGTTCGGCTTACTTGCTCGCGATAAAAACGGATGTAGAAACGCAAGGAGATTTCATAAGGTTTTTGATAAAGGAAGTTGAGAATGCAGCGTTTACAGACATCAAGGATGTGGTGCCTTTTGTCAAATGGCTGGACGATGAGCTCTCATATTTGGTGGATGAAAGAGCTGTGCTGAAGCACTTCGACTGGCCAGAGCAGAAGGCCGATGCTCTGCGCGAGGCTGCATTTGGGTACTGTGATCTCAAGAAGCTTGAAACCGAGGCCTCGTCGTTTCCCGACGATTCTCGCCATCCCTGTGGTCCAACCCTCAAGAAGATGCAGGCTTTGCTGGAAAAATTGGAGCATGGTGTTTACAATCTTTCACGGATCAGAGAATCCGCCACTCAAAGATACAAGGTTTTCCAAATCCCTACCAATTGGATGCTCGATACTGAATTCGTAAGCCAGATCAAGCTGGCATCCGTGAAATTGGCAATGAAGTACATGAAAAGAGTCTCTGCTGAGCTTGAAATAGTAGGAGGTGGCCCCGAAGAAGAAGAGCTGATAGTTCAAGGTGTTCGATTTGCCTTCCGTGTACATCAGTTTGCCGGGGGTTTTGATGCAGAAACGATGAGAGCATTCCAGGTGTTGAGAGATAAAGTCAGGTCATGCCATGTACAATGCCAAAACCAGCAACAGCAAAAAATTGTGTGCAGGTCTACACCATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

609

Amino Acids

68.31

Weight (kDa)

8.67

Isoelectric Point (pI)

61.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18570 AT4G18570
fragaria_vesca FvH4_3g08000
malus_domestica MD05G1303500.v1.1 MD10G1282700.v1.1
prunus_persica Prupe.4G059200_v2.0.a1
pyrus_communis pycom05g28050 pycom10g23580
rosa_chinensis RchiOBHm_Chr5g0010311
rosa_laevigata RLG00000031736
rosa_multiflora Rmu_co8025906.1_g000001 Rmu_sc0012578.1_g000002
rosa_roxburghii Rroxscaffold_1G00065940
rosa_rugosa Rorug04G0450100
rosa_samantha Rh5AG081200 Rh5BG076100 Rh5CG089400 Rh5DG076800
rosa_wichuraiana Rw5G007520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1800
Acc65I GGTACC 1 cut(s) 895
AccB1I GGYRCC 2 cut(s) 895, 1228
AccBSI CCGCTC 1 cut(s) 926
AccI GTMKAC 3 cut(s) 746, 755, 1814
AccII CGCG 4 cut(s) 133, 1070, 1136, 1332
AclWI GGATC 3 cut(s) 310, 510, 1490
AcoI YGGCCR 1 cut(s) 1304
AcsI RAATTY 1 cut(s) 1550
AcuI CTGAAG 1 cut(s) 1310
AfaI GTAC 6 cut(s) 149, 897, 1349, 1598, 1692, 1773
AfeI AGCGCT 1 cut(s) 668
AfiI CCNNNNNNNGG 3 cut(s) 304, 956, 979
AgsI TTSAA 5 cut(s) 247, 487, 1370, 1625, 1667
AjiI CACGTC 1 cut(s) 193
AjnI CCWGG 4 cut(s) 210, 561, 882, 1737
Alw21I GWGCWC 2 cut(s) 225, 1260
Alw26I GTCTC 6 cut(s) 59, 697, 703, 1026, 1038, 1615
AlwI GGATC 3 cut(s) 310, 510, 1490
Ama87I CYCGRG 2 cut(s) 260, 715
Aor51HI AGCGCT 1 cut(s) 668
AoxI GGCC 9 cut(s) 363, 372, 828, 965, 969, 1304, 1317, 1377, 1639
ApeKI GCWGC 3 cut(s) 34, 1202, 1337
ApoI RAATTY 1 cut(s) 1550
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
Asp700I GAANNNNTTC 1 cut(s) 1295
Asp718I GGTACC 1 cut(s) 895
AspA2I CCTAGG 1 cut(s) 776
AspLEI GCGC 5 cut(s) 135, 629, 669, 1072, 1332
AspS9I GGNCC 5 cut(s) 172, 588, 970, 1415, 1640
AsuC2I CCSGG 2 cut(s) 227, 1705
AsuHPI GGTGA 3 cut(s) 28, 571, 994
AsuII TTCGAA 3 cut(s) 74, 350, 677
AvaI CYCGRG 2 cut(s) 260, 715
AvaII GGWCC 3 cut(s) 172, 588, 1415
AvrII CCTAGG 1 cut(s) 776
BalI TGGCCA 1 cut(s) 1306
BanI GGYRCC 2 cut(s) 895, 1228
BanII GRGCYC 3 cut(s) 225, 570, 1260
BbsI GAAGAC 2 cut(s) 254, 339
Bbv12I GWGCWC 2 cut(s) 225, 1260
BbvI GCAGC 3 cut(s) 21, 1214, 1324
BccI CCATC 3 cut(s) 55, 811, 1413
BceAI ACGGC 4 cut(s) 67, 73, 832, 901
BciT130I CCWGG 4 cut(s) 212, 563, 884, 1739
BcnI CCSGG 2 cut(s) 227, 1705
BcoDI GTCTC 6 cut(s) 59, 697, 703, 1026, 1038, 1615
BfaI CTAG 2 cut(s) 662, 777
BfoI RGCGCY 1 cut(s) 670
BfuAI ACCTGC 1 cut(s) 1800
BglI GCCNNNNNGGC 1 cut(s) 371
BglII AGATCT 1 cut(s) 764
BisI GCNGC 6 cut(s) 24, 35, 185, 927, 1203, 1338
BlnI CCTAGG 1 cut(s) 776
BlpI GCTNAGC 1 cut(s) 1617
BlsI GCNGC 6 cut(s) 25, 36, 186, 928, 1204, 1339
Bme1390I CCNGG 6 cut(s) 212, 227, 563, 884, 1705, 1739
Bme18I GGWCC 3 cut(s) 172, 588, 1415
BmeT110I CYCGRG 2 cut(s) 260, 715
BmgBI CACGTC 1 cut(s) 193
BmgT120I GGNCC 5 cut(s) 172, 588, 970, 1415, 1640
BmiI GGNNCC 8 cut(s) 619, 783, 897, 930, 972, 1063, 1230, 1642
BmrFI CCNGG 6 cut(s) 212, 227, 563, 884, 1705, 1739
BmsI GCATC 5 cut(s) 1312, 1422, 1527, 1583, 1705
BpiI GAAGAC 2 cut(s) 254, 339
Bpu10I CCTNAGC 1 cut(s) 180
Bpu1102I GCTNAGC 1 cut(s) 1617
Bpu14I TTCGAA 3 cut(s) 74, 350, 677
BpuEI CTTGAG 3 cut(s) 295, 1343, 1409
BpuMI CCSGG 2 cut(s) 227, 1705
BsaI GGTCTC 1 cut(s) 697
BsaJI CCNNGG 5 cut(s) 366, 562, 776, 1374, 1704
BsaWI WCCGGW 3 cut(s) 61, 101, 581
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 3 cut(s) 304, 956, 979
Bse118I RCCGGY 2 cut(s) 967, 1072
Bse1I ACTGG 1 cut(s) 1307
Bse3DI GCAATG 3 cut(s) 33, 468, 1596
BseBI CCWGG 4 cut(s) 212, 563, 884, 1739
BseDI CCNNGG 5 cut(s) 366, 562, 776, 1374, 1704
BseGI GGATG 8 cut(s) 803, 809, 1153, 1228, 1279, 1405, 1542, 1574
BseLI CCNNNNNNNGG 3 cut(s) 304, 956, 979
BseMI GCAATG 3 cut(s) 33, 468, 1596
BseMII CTCAG 3 cut(s) 462, 684, 1608
BseNI ACTGG 1 cut(s) 1307
BseRI GAGGAG 2 cut(s) 151, 448
BseXI GCAGC 3 cut(s) 21, 1214, 1324
BseYI CCCAGC 1 cut(s) 8
Bsh1236I CGCG 4 cut(s) 133, 1070, 1136, 1332
BshFI GGCC 9 cut(s) 365, 374, 830, 967, 971, 1306, 1319, 1379, 1641
BshNI GGYRCC 2 cut(s) 895, 1228
BsiHKAI GWGCWC 2 cut(s) 225, 1260
BsiHKCI CYCGRG 2 cut(s) 260, 715
BslFI GGGAC 1 cut(s) 281
BslI CCNNNNNNNGG 3 cut(s) 304, 956, 979
BsmAI GTCTC 6 cut(s) 59, 697, 703, 1026, 1038, 1615
BsmFI GGGAC 1 cut(s) 281
BsmI GAATGC 3 cut(s) 771, 1204, 1733
BsnI GGCC 9 cut(s) 365, 374, 830, 967, 971, 1306, 1319, 1379, 1641
Bso31I GGTCTC 1 cut(s) 697
BsoBI CYCGRG 2 cut(s) 260, 715
Bsp119I TTCGAA 3 cut(s) 74, 350, 677
Bsp1286I GDGCHC 3 cut(s) 225, 570, 1260
Bsp1407I TGTACA 2 cut(s) 1690, 1771
Bsp143I GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
Bsp1720I GCTNAGC 1 cut(s) 1617
Bsp68I TCGCGA 1 cut(s) 1136
BspANI GGCC 9 cut(s) 365, 374, 830, 967, 971, 1306, 1319, 1379, 1641
BspCNI CTCAG 3 cut(s) 463, 683, 1609
BspFNI CGCG 4 cut(s) 133, 1070, 1136, 1332
BspLI GGNNCC 8 cut(s) 619, 783, 897, 930, 972, 1063, 1230, 1642
BspMI ACCTGC 1 cut(s) 1800
BspPI GGATC 3 cut(s) 310, 510, 1490
BspQI GCTCTTC 2 cut(s) 213, 1647
BspT104I TTCGAA 3 cut(s) 74, 350, 677
BspT107I GGYRCC 2 cut(s) 895, 1228
BspTNI GGTCTC 1 cut(s) 697
BsrBI CCGCTC 1 cut(s) 926
BsrDI GCAATG 3 cut(s) 33, 468, 1596
BsrFI RCCGGY 2 cut(s) 967, 1072
BsrGI TGTACA 2 cut(s) 1690, 1771
BsrI ACTGG 1 cut(s) 1307
BssAI RCCGGY 2 cut(s) 967, 1072
BssECI CCNNGG 5 cut(s) 366, 562, 776, 1374, 1704
BssMI GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
BssT1I CCWWGG 2 cut(s) 366, 776
Bst2UI CCWGG 4 cut(s) 212, 563, 884, 1739
Bst4CI ACNGT 2 cut(s) 1118, 1352
Bst6I CTCTTC 5 cut(s) 213, 423, 674, 1024, 1647
BstAPI GCANNNNNTGC 1 cut(s) 1441
BstAUI TGTACA 2 cut(s) 1690, 1771
BstBI TTCGAA 3 cut(s) 74, 350, 677
BstC8I GCNNGC 6 cut(s) 345, 969, 1074, 1134, 1437, 1572
BstDEI CTNAG 4 cut(s) 180, 471, 670, 1617
BstEII GGTNACC 1 cut(s) 577
BstENI CCTNNNNNAGG 1 cut(s) 954
BstF5I GGATG 8 cut(s) 803, 809, 1153, 1228, 1279, 1405, 1542, 1574
BstFNI CGCG 4 cut(s) 133, 1070, 1136, 1332
BstH2I RGCGCY 1 cut(s) 670
BstHHI GCGC 5 cut(s) 135, 629, 669, 1072, 1332
BstKTI GATC 8 cut(s) 318, 505, 767, 1101, 1110, 1357, 1485, 1566
BstMAI GTCTC 6 cut(s) 59, 697, 703, 1026, 1038, 1615
BstMBI GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
BstNI CCWGG 4 cut(s) 212, 563, 884, 1739
BstPI GGTNACC 1 cut(s) 577
BstSCI CCNGG 6 cut(s) 210, 225, 561, 882, 1703, 1737
BstUI CGCG 4 cut(s) 133, 1070, 1136, 1332
BstV1I GCAGC 3 cut(s) 21, 1214, 1324
BstV2I GAAGAC 2 cut(s) 254, 339
BstX2I RGATCY 2 cut(s) 315, 764
BstXI CCANNNNNNTGG 1 cut(s) 1412
BstYI RGATCY 2 cut(s) 315, 764
BsuRI GGCC 9 cut(s) 365, 374, 830, 967, 971, 1306, 1319, 1379, 1641
BtrI CACGTC 1 cut(s) 193
BtsCI GGATG 8 cut(s) 803, 809, 1153, 1228, 1279, 1405, 1542, 1574
BtsI GCAGTG 1 cut(s) 1060
BtsIMutI CAGTG 1 cut(s) 1060
BtuMI TCGCGA 1 cut(s) 1136
BveI ACCTGC 1 cut(s) 1800
Cac8I GCNNGC 6 cut(s) 345, 969, 1074, 1134, 1437, 1572
CfoI GCGC 5 cut(s) 135, 629, 669, 1072, 1332
Cfr10I RCCGGY 2 cut(s) 967, 1072
Cfr13I GGNCC 5 cut(s) 172, 588, 970, 1415, 1640
CseI GACGC 1 cut(s) 1076
Csp6I GTAC 6 cut(s) 148, 896, 1348, 1597, 1691, 1772
CviAII CATG 8 cut(s) 571, 638, 1096, 1460, 1600, 1764, 1769, 1821
CviQI GTAC 6 cut(s) 148, 896, 1348, 1597, 1691, 1772
DdeI CTNAG 4 cut(s) 180, 471, 670, 1617
DpnI GATC 8 cut(s) 317, 504, 766, 1100, 1109, 1356, 1484, 1565
DpnII GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
EaeI YGGCCR 1 cut(s) 1304
Eam1104I CTCTTC 5 cut(s) 213, 423, 674, 1024, 1647
EarI CTCTTC 5 cut(s) 213, 423, 674, 1024, 1647
EciI GGCGGA 6 cut(s) 197, 855, 903, 921, 927, 1483
Ecl136II GAGCTC 2 cut(s) 223, 1258
Eco130I CCWWGG 2 cut(s) 366, 776
Eco147I AGGCCT 2 cut(s) 365, 1379
Eco24I GRGCYC 3 cut(s) 225, 570, 1260
Eco31I GGTCTC 1 cut(s) 697
Eco47I GGWCC 3 cut(s) 172, 588, 1415
Eco47III AGCGCT 1 cut(s) 668
Eco53kI GAGCTC 2 cut(s) 223, 1258
Eco57I CTGAAG 1 cut(s) 1310
Eco88I CYCGRG 2 cut(s) 260, 715
Eco91I GGTNACC 1 cut(s) 577
EcoICRI GAGCTC 2 cut(s) 223, 1258
EcoNI CCTNNNNNAGG 1 cut(s) 954
EcoO65I GGTNACC 1 cut(s) 577
EcoRI GAATTC 1 cut(s) 1550
EcoRII CCWGG 4 cut(s) 210, 561, 882, 1737
EcoT14I CCWWGG 2 cut(s) 366, 776
EcoT38I GRGCYC 3 cut(s) 225, 570, 1260
ErhI CCWWGG 2 cut(s) 366, 776
FaeI CATG 8 cut(s) 574, 641, 1099, 1463, 1603, 1767, 1772, 1824
FaqI GGGAC 1 cut(s) 281
FatI CATG 8 cut(s) 570, 637, 1095, 1459, 1599, 1763, 1768, 1820
FauI CCCGC 1 cut(s) 954
FblI GTMKAC 3 cut(s) 746, 755, 1814
Fnu4HI GCNGC 6 cut(s) 24, 35, 185, 927, 1203, 1338
FokI GGATG 8 cut(s) 790, 796, 1160, 1235, 1286, 1392, 1549, 1561
FriOI GRGCYC 3 cut(s) 225, 570, 1260
FseI GGCCGGCC 1 cut(s) 971
Fsp4HI GCNGC 6 cut(s) 24, 35, 185, 927, 1203, 1338
FspBI CTAG 2 cut(s) 662, 777
GlaI GCGC 5 cut(s) 134, 628, 668, 1071, 1331
GluI GCNGC 6 cut(s) 24, 35, 185, 927, 1203, 1338
GsaI CCCAGC 1 cut(s) 12
HaeII RGCGCY 1 cut(s) 670
HaeIII GGCC 9 cut(s) 365, 374, 830, 967, 971, 1306, 1319, 1379, 1641
HgaI GACGC 1 cut(s) 1076
HhaI GCGC 5 cut(s) 135, 629, 669, 1072, 1332
Hin1II CATG 8 cut(s) 574, 641, 1099, 1463, 1603, 1767, 1772, 1824
Hin6I GCGC 5 cut(s) 133, 627, 667, 1070, 1330
HinP1I GCGC 5 cut(s) 133, 627, 667, 1070, 1330
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HindIII AAGCTT 1 cut(s) 1364
HphI GGTGA 3 cut(s) 28, 571, 994
Hpy166II GTNNAC 7 cut(s) 148, 747, 756, 1209, 1468, 1691, 1815
Hpy188I TCNGA 9 cut(s) 481, 502, 657, 673, 730, 764, 1023, 1066, 1487
Hpy8I GTNNAC 7 cut(s) 148, 747, 756, 1209, 1468, 1691, 1815
Hpy99I CGWCG 9 cut(s) 88, 94, 290, 539, 550, 553, 1070, 1387, 1397
HpyCH4III ACNGT 2 cut(s) 1118, 1352
HpyCH4IV ACGT 2 cut(s) 192, 633
HpyCH4V TGCA 7 cut(s) 37, 641, 1202, 1340, 1435, 1718, 1809
HpyF3I CTNAG 4 cut(s) 180, 471, 670, 1617
HpySE526I ACGT 2 cut(s) 192, 633
Hsp92II CATG 8 cut(s) 574, 641, 1099, 1463, 1603, 1767, 1772, 1824
HspAI GCGC 5 cut(s) 133, 627, 667, 1070, 1330
KpnI GGTACC 1 cut(s) 899
KroI GCCGGC 2 cut(s) 967, 1072
KroNI GCCGGC 2 cut(s) 969, 1074
Kzo9I GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
LguI GCTCTTC 2 cut(s) 213, 1647
Lsp1109I GCAGC 3 cut(s) 21, 1214, 1324
LweI GCATC 5 cut(s) 1312, 1422, 1527, 1583, 1705
MaeI CTAG 2 cut(s) 662, 777
MaeII ACGT 2 cut(s) 192, 633
MaeIII GTNAC 5 cut(s) 193, 577, 722, 847, 1091
MalI GATC 8 cut(s) 317, 504, 766, 1100, 1109, 1356, 1484, 1565
MbiI CCGCTC 1 cut(s) 926
MboI GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
MfeI CAATTG 1 cut(s) 1531
MflI RGATCY 2 cut(s) 315, 764
MhlI GDGCHC 3 cut(s) 225, 570, 1260
MlsI TGGCCA 1 cut(s) 1306
MluCI AATT 5 cut(s) 1451, 1531, 1550, 1583, 1800
MluNI TGGCCA 1 cut(s) 1306
MlyI GAGTC 9 cut(s) 61, 245, 290, 661, 742, 752, 1028, 1040, 1617
MmeI TCCRAC 5 cut(s) 480, 837, 899, 1089, 1442
Mox20I TGGCCA 1 cut(s) 1306
MroNI GCCGGC 2 cut(s) 967, 1072
MroXI GAANNNNTTC 1 cut(s) 1295
MscI TGGCCA 1 cut(s) 1306
MseI TTAA 1 cut(s) 608
MslI CAYNNNNRTG 1 cut(s) 1410
Msp20I TGGCCA 1 cut(s) 1306
MspR9I CCNGG 6 cut(s) 212, 227, 563, 884, 1705, 1739
MunI CAATTG 1 cut(s) 1531
Mva1269I GAATGC 3 cut(s) 771, 1204, 1733
MvaI CCWGG 4 cut(s) 212, 563, 884, 1739
MvnI CGCG 4 cut(s) 133, 1070, 1136, 1332
NaeI GCCGGC 2 cut(s) 969, 1074
NciI CCSGG 2 cut(s) 227, 1705
NdeII GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
NgoMIV GCCGGC 2 cut(s) 967, 1072
NlaIII CATG 8 cut(s) 574, 641, 1099, 1463, 1603, 1767, 1772, 1824
NlaIV GGNNCC 8 cut(s) 619, 783, 897, 930, 972, 1063, 1230, 1642
NmeAIII GCCGAG 2 cut(s) 400, 766
NmuCI GTSAC 3 cut(s) 193, 577, 1091
NruI TCGCGA 1 cut(s) 1136
NspV TTCGAA 3 cut(s) 74, 350, 677
PaeR7I CTCGAG 2 cut(s) 260, 715
PceI AGGCCT 2 cut(s) 365, 1379
PciSI GCTCTTC 2 cut(s) 213, 1647
PcsI WCGNNNNNNNCGW 5 cut(s) 80, 86, 704, 884, 1107
PctI GAATGC 3 cut(s) 771, 1204, 1733
PdiI GCCGGC 2 cut(s) 969, 1074
PdmI GAANNNNTTC 1 cut(s) 1295
PfeI GAWTC 4 cut(s) 558, 674, 1397, 1490
PflFI GACNNNGTC 1 cut(s) 751
PfoI TCCNGGA 1 cut(s) 225
PkrI GCNGC 6 cut(s) 25, 36, 186, 928, 1204, 1339
PleI GAGTC 9 cut(s) 61, 244, 289, 660, 742, 751, 1028, 1040, 1616
PpsI GAGTC 9 cut(s) 61, 244, 289, 660, 742, 751, 1028, 1040, 1616
Psp124BI GAGCTC 2 cut(s) 225, 1260
Psp6I CCWGG 4 cut(s) 210, 561, 882, 1737
PspEI GGTNACC 1 cut(s) 577
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 4 cut(s) 210, 561, 882, 1737
PspN4I GGNNCC 8 cut(s) 619, 783, 897, 930, 972, 1063, 1230, 1642
PspPI GGNCC 5 cut(s) 172, 588, 970, 1415, 1640
PspXI VCTCGAGB 1 cut(s) 715
PsuI RGATCY 2 cut(s) 315, 764
PsyI GACNNNGTC 1 cut(s) 751
RigI GGCCGGCC 1 cut(s) 971
RruI TCGCGA 1 cut(s) 1136
RsaI GTAC 6 cut(s) 149, 897, 1349, 1598, 1692, 1773
RsaNI GTAC 6 cut(s) 148, 896, 1348, 1597, 1691, 1772
RseI CAYNNNNRTG 1 cut(s) 1410
SacI GAGCTC 2 cut(s) 225, 1260
SalI GTCGAC 1 cut(s) 745
SapI GCTCTTC 2 cut(s) 213, 1647
SaqAI TTAA 1 cut(s) 608
SatI GCNGC 6 cut(s) 24, 35, 185, 927, 1203, 1338
Sau3AI GATC 8 cut(s) 315, 502, 764, 1098, 1107, 1354, 1482, 1563
Sau96I GGNCC 5 cut(s) 172, 588, 970, 1415, 1640
SchI GAGTC 9 cut(s) 61, 245, 290, 661, 742, 752, 1028, 1040, 1617
ScrFI CCNGG 6 cut(s) 212, 227, 563, 884, 1705, 1739
SduI GDGCHC 3 cut(s) 225, 570, 1260
SfaNI GCATC 5 cut(s) 1312, 1422, 1527, 1583, 1705
SfiI GGCCNNNNNGGCC 1 cut(s) 371
Sfr274I CTCGAG 2 cut(s) 260, 715
SfuI TTCGAA 3 cut(s) 74, 350, 677
SinI GGWCC 3 cut(s) 172, 588, 1415
SlaI CTCGAG 2 cut(s) 260, 715
SmiMI CAYNNNNRTG 1 cut(s) 1410
SmlI CTYRAG 5 cut(s) 260, 274, 715, 1358, 1424
SmoI CTYRAG 5 cut(s) 260, 274, 715, 1358, 1424
Sse9I AATT 5 cut(s) 1451, 1531, 1550, 1583, 1800
SseBI AGGCCT 2 cut(s) 365, 1379
SspMI CTAG 2 cut(s) 662, 777
SstI GAGCTC 2 cut(s) 225, 1260
StuI AGGCCT 2 cut(s) 365, 1379
StyD4I CCNGG 6 cut(s) 210, 225, 561, 882, 1703, 1737
StyI CCWWGG 2 cut(s) 366, 776
TaaI ACNGT 2 cut(s) 1118, 1352
TaiI ACGT 2 cut(s) 195, 636
TaqII GACCGA 1 cut(s) 721
TasI AATT 5 cut(s) 1451, 1531, 1550, 1583, 1800
TatI WGTACW 4 cut(s) 147, 1596, 1690, 1771
TauI GCSGC 3 cut(s) 26, 187, 929
TfiI GAWTC 4 cut(s) 558, 674, 1397, 1490
Tru1I TTAA 1 cut(s) 608
Tru9I TTAA 1 cut(s) 608
TscAI CASTG 1 cut(s) 1060
TseFI GTSAC 3 cut(s) 193, 577, 1091
TseI GCWGC 3 cut(s) 34, 1202, 1337
Tsp45I GTSAC 3 cut(s) 193, 577, 1091
TspDTI ATGAA 5 cut(s) 626, 1159, 1290, 1607, 1616
TspGWI ACGGA 8 cut(s) 212, 266, 274, 713, 1160, 1495, 1567, 1676
TspRI CASTG 1 cut(s) 1060
Tth111I GACNNNGTC 1 cut(s) 751
VpaK11BI GGWCC 3 cut(s) 172, 588, 1415
XagI CCTNNNNNAGG 1 cut(s) 954
XapI RAATTY 1 cut(s) 1550
XhoI CTCGAG 2 cut(s) 260, 715
XmaJI CCTAGG 1 cut(s) 776
XmiI GTMKAC 3 cut(s) 746, 755, 1814
XmnI GAANNNNTTC 1 cut(s) 1295
XspI CTAG 2 cut(s) 662, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.