MD10G1282700.v1.1

Protein CHUP1, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0012111
Physical Location & Seq
Reverse (-)
37324347 .. 37328843
4497 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1282700.v1.1.491

Sequence Viewer

Length: 1821 bp
ATGGTGGCTGGGAAGGTGAGGGTGGCAATGGGGCTACAAAAATCACCTGCGAATCCAAAACCGGAAACTCCATCGAAGTCGCCGTCGCCGTCGCTGAGCTCCGGGAAGACATCGCAGAAGGGGGCGGTATTCTCGCGCTCCTTCGGCGCGTACTTCCCGCGCTCGTCTGCGCAGGTGCAGCCTAAGCCGCCGGACGTGACGGAGCTTCTCCGCCTGGTGGAGGAGCTCCGGGAGCGAGAGTCGAGGCTGAAAACGGAGCTCCTCGAGCACAAGCTCCTGAGAGAGTCGGTCGCCATCCTCCCCGTATTGGAGAACGAGATCATCAGCAAGGACGAAGAGATTGACAGAGCGTCGAAGCGGGTGGAGGAGCTGGCGGCGGAGAACCAGCGGCTGAGAAATCAGGTGGCCGAAGTGACGTCAGCGTTGGAAGAAGAGAGGAGGGAGAAAGAAGAGAAATTGAAGCTGTTGGAGGCTGAAATTTCGGAGCTGAAGAAAACGGCGTCGGATCGTGTGATTAGTTTTGAAAACGACGAGCTTTCGTCGTCGCAGAGATTTCAGGGACTGATGGAGGTCACCGGAAGGTCGAATCTGATCAGAAATCTGAAGAGGGGAGTGAAATGCGCCGACATTCCGACAAATCCGGAGAATCAGAAGCTCGACGGCTCCGAGTCGAAGAGGGAAGAGCCGGAATCAGAGAGGCCGAGGCTGTCGAGGTGTAACTCGGAGGAGTTAGCCGAGTCGGCTCTGGCTACCATCAGATCTCGCATCCCGAGGGTTCCCAAACCGCCGCCGAGACCGTCCACATCCAACAGTCAAAACAAGGCCTCAACAGAACAGGGGAATGCATTTCCACCACCGCCTCCGCCGCCGCCAAGTCAGACAAAATCCACACTCCCACCGCCACCACCTCCGTCTAAGGCGGCTCCACCTCCGCCTCCTCCGCCACCGAGAGGTTCAAGGCCAGCGACGGCGAAGGTGAAGCGAGTGCCGGAGGTTGTGGAGTTCTACCACTCCCTGATGCGAAGAGACTCCCGGAGGGAGTCCGGCAGCGGAGTCTCGGACGCAACGGGAACCGCCAATGCCCGCGACATGATCGGCGAGATCGAGAACCGGTCAGCTCACCTGCTTGCTATAAAAACGGACGTAGAAACGCAGGGAGATTTCATTAGGTTTTTGATAAAAGAAATCGAAAACGCAGCGTTTACAGACATCAACGATGTGGTGCCTTTTGTGAAGTGGCTGGATGATGAGCTCTCGTACTTGGTGGATGAAAGAGCTGTGCTGAAGCACTTTGACTGGCCGGAGCAGAAGGCGGATGCTCTGCGCGAAGCGGCATTCGGGTATAGCGATCTCAAGAAGCTTGAATCCGAGGCCTCGTCGTTCCCTGATCATTCTCGCCAGCCCTGCGGTCCAACCCTCAAGAAGATGCAGGCTTTGCTGGAAAAATTGGAGCATGGGGTTTACAATCTCTCGCGGGTGAGAGATTCCGCCACTAAAAGATACAAAGTTTTCCAAATTCCTACAAATTGGATGCTCGATTCTGAATTTGTAAGCCAGATCAAGTTGGCATCGGTAAAATTGGCAATGAAGTACATGAAGAGAGTCTCTGCCGAGCTTGAAATAGTCGGCGGTGGTCCTGAAGAAGAAGAGCTGATAGTTCAAGGCGTTCGATTTGCCTTCCGCGTACATCAGTTTGCTGGAGGATTCGATGCAGAAACGATGAGAGCGTTTCAGGTGTTGAGAGATAAGGTGAGATCGTGCCATGTACAATGCCAGAACCAGCAGCAGCAGAAAATCGTATGCCGGTCTACACCGTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

607

Amino Acids

67.87

Weight (kDa)

8.73

Isoelectric Point (pI)

59.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18570 AT4G18570
fragaria_vesca FvH4_3g08000
malus_domestica MD05G1303500.v1.1 MD10G1282700.v1.1
prunus_persica Prupe.4G059200_v2.0.a1
pyrus_communis pycom05g28050 pycom10g23580
rosa_chinensis RchiOBHm_Chr5g0010311
rosa_laevigata RLG00000031736
rosa_multiflora Rmu_co8025906.1_g000001 Rmu_sc0012578.1_g000002
rosa_roxburghii Rroxscaffold_1G00065940
rosa_rugosa Rorug04G0450100
rosa_samantha Rh5AG081200 Rh5BG076100 Rh5CG089400 Rh5DG076800
rosa_wichuraiana Rw5G007520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 55, 163, 1131
AatII GACGTC 1 cut(s) 419
Acc16I TGCGCA 1 cut(s) 171
Acc36I ACCTGC 3 cut(s) 55, 163, 1131
AccB1I GGYRCC 1 cut(s) 1222
AccI GTMKAC 1 cut(s) 1808
AccII CGCG 7 cut(s) 136, 149, 160, 1086, 1326, 1474, 1683
AccIII TCCGGA 1 cut(s) 640
AclWI GGATC 1 cut(s) 513
AcoI YGGCCR 2 cut(s) 405, 1298
AcsI RAATTY 3 cut(s) 477, 1515, 1544
AcuI CTGAAG 4 cut(s) 509, 623, 1304, 1659
AcyI GRCGYC 2 cut(s) 416, 500
AfaI GTAC 5 cut(s) 152, 1259, 1592, 1686, 1767
AfiI CCNNNNNNNGG 4 cut(s) 217, 220, 307, 950
AgeI ACCGGT 1 cut(s) 1110
AgsI TTSAA 6 cut(s) 460, 524, 957, 1364, 1619, 1661
AhdI GACNNNNNGTC 1 cut(s) 349
AjiI CACGTC 1 cut(s) 196
AjnI CCWGG 1 cut(s) 213
Alw21I GWGCWC 5 cut(s) 101, 228, 261, 270, 1254
Alw26I GTCTC 4 cut(s) 787, 1020, 1060, 1609
AlwI GGATC 1 cut(s) 513
AlwNI CAGNNNCTG 2 cut(s) 391, 562
Ama87I CYCGRG 2 cut(s) 263, 769
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 6 cut(s) 405, 698, 822, 959, 1298, 1371
ApeKI GCWGC 5 cut(s) 178, 1047, 1196, 1783, 1786
ApoI RAATTY 3 cut(s) 477, 1515, 1544
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
AsiGI ACCGGT 1 cut(s) 1110
AspLEI GCGC 6 cut(s) 138, 149, 162, 172, 623, 1326
AspS9I GGNCC 2 cut(s) 1409, 1634
AsuC2I CCSGG 3 cut(s) 103, 230, 1033
AsuHPI GGTGA 7 cut(s) 28, 36, 565, 988, 1112, 1489, 1762
AvaI CYCGRG 2 cut(s) 263, 769
AvaII GGWCC 2 cut(s) 1409, 1634
BanI GGYRCC 1 cut(s) 1222
BanII GRGCYC 4 cut(s) 101, 228, 261, 1254
BbsI GAAGAC 1 cut(s) 113
Bbv12I GWGCWC 5 cut(s) 101, 228, 261, 270, 1254
BbvI GCAGC 5 cut(s) 190, 1059, 1208, 1795, 1798
BccI CCATC 4 cut(s) 79, 302, 559, 761
BceAI ACGGC 5 cut(s) 67, 73, 513, 676, 984
BciT130I CCWGG 1 cut(s) 215
BclI TGATCA 2 cut(s) 591, 1387
BcnI CCSGG 3 cut(s) 103, 230, 1033
BcoDI GTCTC 4 cut(s) 787, 1020, 1060, 1609
BfuAI ACCTGC 3 cut(s) 55, 163, 1131
BglI GCCNNNNNGGC 1 cut(s) 740
BglII AGATCT 1 cut(s) 758
BlpI GCTNAGC 1 cut(s) 95
Bme1390I CCNGG 4 cut(s) 103, 215, 230, 1033
Bme18I GGWCC 2 cut(s) 1409, 1634
BmeRI GACNNNNNGTC 1 cut(s) 349
BmeT110I CYCGRG 2 cut(s) 263, 769
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 2 cut(s) 1409, 1634
BmiI GGNNCC 5 cut(s) 664, 777, 924, 1072, 1224
BmrFI CCNGG 4 cut(s) 103, 215, 230, 1033
BmsI GCATC 7 cut(s) 774, 1008, 1306, 1416, 1521, 1577, 1699
BpiI GAAGAC 1 cut(s) 113
BpmI CTGGAG 1 cut(s) 1719
Bpu10I CCTNAGC 1 cut(s) 183
Bpu1102I GCTNAGC 1 cut(s) 95
BpuEI CTTGAG 2 cut(s) 1337, 1403
BpuMI CCSGG 3 cut(s) 103, 230, 1033
BsaHI GRCGYC 2 cut(s) 416, 500
BsaI GGTCTC 1 cut(s) 787
BsaJI CCNNGG 3 cut(s) 701, 770, 1368
BsaWI WCCGGW 4 cut(s) 61, 575, 640, 1110
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 4 cut(s) 217, 220, 307, 950
Bse118I RCCGGY 2 cut(s) 1110, 1803
Bse1I ACTGG 1 cut(s) 1301
Bse3DI GCAATG 2 cut(s) 33, 1590
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 1 cut(s) 215
BseDI CCNNGG 3 cut(s) 701, 770, 1368
BseGI GGATG 7 cut(s) 294, 765, 803, 1249, 1273, 1321, 1536
BseLI CCNNNNNNNGG 4 cut(s) 217, 220, 307, 950
BseMI GCAATG 2 cut(s) 33, 1590
BseMII CTCAG 3 cut(s) 86, 269, 383
BseNI ACTGG 1 cut(s) 1301
BseRI GAGGAG 6 cut(s) 236, 251, 380, 451, 740, 927
BseXI GCAGC 5 cut(s) 190, 1059, 1208, 1795, 1798
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 1 cut(s) 197
Bsh1236I CGCG 7 cut(s) 136, 149, 160, 1086, 1326, 1474, 1683
Bsh1285I CGRYCG 1 cut(s) 291
BshFI GGCC 6 cut(s) 407, 700, 824, 961, 1300, 1373
BshNI GGYRCC 1 cut(s) 1222
BshTI ACCGGT 1 cut(s) 1110
BsiEI CGRYCG 1 cut(s) 291
BsiHKAI GWGCWC 5 cut(s) 101, 228, 261, 270, 1254
BsiHKCI CYCGRG 2 cut(s) 263, 769
BslFI GGGAC 1 cut(s) 573
BslI CCNNNNNNNGG 4 cut(s) 217, 220, 307, 950
BsmAI GTCTC 4 cut(s) 787, 1020, 1060, 1609
BsmFI GGGAC 1 cut(s) 573
BsmI GAATGC 2 cut(s) 847, 1334
BsnI GGCC 6 cut(s) 407, 700, 824, 961, 1300, 1373
Bso31I GGTCTC 1 cut(s) 787
BsoBI CYCGRG 2 cut(s) 263, 769
Bsp1286I GDGCHC 5 cut(s) 101, 228, 261, 270, 1254
Bsp13I TCCGGA 1 cut(s) 640
Bsp1407I TGTACA 1 cut(s) 1765
Bsp1720I GCTNAGC 1 cut(s) 95
BspANI GGCC 6 cut(s) 407, 700, 824, 961, 1300, 1373
BspCNI CTCAG 3 cut(s) 87, 270, 384
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 7 cut(s) 136, 149, 160, 1086, 1326, 1474, 1683
BspLI GGNNCC 5 cut(s) 664, 777, 924, 1072, 1224
BspMI ACCTGC 3 cut(s) 55, 163, 1131
BspPI GGATC 1 cut(s) 513
BspQI GCTCTTC 2 cut(s) 675, 1641
BspT107I GGYRCC 1 cut(s) 1222
BspTNI GGTCTC 1 cut(s) 787
BsrDI GCAATG 2 cut(s) 33, 1590
BsrFI RCCGGY 2 cut(s) 1110, 1803
BsrGI TGTACA 1 cut(s) 1765
BsrI ACTGG 1 cut(s) 1301
BssAI RCCGGY 2 cut(s) 1110, 1803
BssECI CCNNGG 3 cut(s) 701, 770, 1368
BssNI GRCGYC 2 cut(s) 416, 500
Bst2UI CCWGG 1 cut(s) 215
Bst4CI ACNGT 3 cut(s) 798, 812, 1815
Bst6I CTCTTC 9 cut(s) 330, 426, 444, 599, 668, 675, 1018, 1592, 1641
BstACI GRCGYC 2 cut(s) 416, 500
BstAPI GCANNNNNTGC 1 cut(s) 1435
BstAUI TGTACA 1 cut(s) 1765
BstC8I GCNNGC 6 cut(s) 372, 963, 1084, 1128, 1400, 1431
BstDEI CTNAG 5 cut(s) 95, 183, 278, 392, 915
BstEII GGTNACC 1 cut(s) 571
BstENI CCTNNNNNAGG 1 cut(s) 218
BstF5I GGATG 7 cut(s) 294, 765, 803, 1249, 1273, 1321, 1536
BstFNI CGCG 7 cut(s) 136, 149, 160, 1086, 1326, 1474, 1683
BstHHI GCGC 6 cut(s) 138, 149, 162, 172, 623, 1326
BstMAI GTCTC 4 cut(s) 787, 1020, 1060, 1609
BstMCI CGRYCG 1 cut(s) 291
BstNI CCWGG 1 cut(s) 215
BstPI GGTNACC 1 cut(s) 571
BstSCI CCNGG 4 cut(s) 101, 213, 228, 1031
BstUI CGCG 7 cut(s) 136, 149, 160, 1086, 1326, 1474, 1683
BstV1I GCAGC 5 cut(s) 190, 1059, 1208, 1795, 1798
BstV2I GAAGAC 1 cut(s) 113
BstX2I RGATCY 1 cut(s) 758
BstYI RGATCY 1 cut(s) 758
BsuRI GGCC 6 cut(s) 407, 700, 824, 961, 1300, 1373
BtgZI GCGATG 1 cut(s) 96
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 7 cut(s) 294, 765, 803, 1249, 1273, 1321, 1536
BveI ACCTGC 3 cut(s) 55, 163, 1131
Cac8I GCNNGC 6 cut(s) 372, 963, 1084, 1128, 1400, 1431
CaiI CAGNNNCTG 2 cut(s) 391, 562
CfoI GCGC 6 cut(s) 138, 149, 162, 172, 623, 1326
Cfr10I RCCGGY 2 cut(s) 1110, 1803
Cfr13I GGNCC 2 cut(s) 1409, 1634
CseI GACGC 3 cut(s) 339, 489, 1070
Csp6I GTAC 5 cut(s) 151, 1258, 1591, 1685, 1766
CspAI ACCGGT 1 cut(s) 1110
CviAII CATG 4 cut(s) 1090, 1454, 1594, 1763
CviQI GTAC 5 cut(s) 151, 1258, 1591, 1685, 1766
DdeI CTNAG 5 cut(s) 95, 183, 278, 392, 915
DriI GACNNNNNGTC 1 cut(s) 349
EaeI YGGCCR 2 cut(s) 405, 1298
Eam1104I CTCTTC 9 cut(s) 330, 426, 444, 599, 668, 675, 1018, 1592, 1641
Eam1105I GACNNNNNGTC 1 cut(s) 349
EarI CTCTTC 9 cut(s) 330, 426, 444, 599, 668, 675, 1018, 1592, 1641
EciI GGCGGA 7 cut(s) 200, 392, 852, 921, 930, 1328, 1477
Ecl136II GAGCTC 4 cut(s) 99, 226, 259, 1252
Eco147I AGGCCT 2 cut(s) 824, 1373
Eco24I GRGCYC 4 cut(s) 101, 228, 261, 1254
Eco31I GGTCTC 1 cut(s) 787
Eco47I GGWCC 2 cut(s) 1409, 1634
Eco53kI GAGCTC 4 cut(s) 99, 226, 259, 1252
Eco57I CTGAAG 4 cut(s) 509, 623, 1304, 1659
Eco88I CYCGRG 2 cut(s) 263, 769
Eco91I GGTNACC 1 cut(s) 571
EcoICRI GAGCTC 4 cut(s) 99, 226, 259, 1252
EcoNI CCTNNNNNAGG 1 cut(s) 218
EcoO65I GGTNACC 1 cut(s) 571
EcoRII CCWGG 1 cut(s) 213
EcoT22I ATGCAT 1 cut(s) 847
EcoT38I GRGCYC 4 cut(s) 101, 228, 261, 1254
FaeI CATG 4 cut(s) 1093, 1457, 1597, 1766
FaiI YATR 7 cut(s) 1091, 1133, 1344, 1455, 1595, 1764, 1801
FaqI GGGAC 1 cut(s) 573
FatI CATG 4 cut(s) 1089, 1453, 1593, 1762
FauI CCCGC 4 cut(s) 165, 351, 1091, 1467
FbaI TGATCA 2 cut(s) 591, 1387
FblI GTMKAC 1 cut(s) 1808
FokI GGATG 7 cut(s) 281, 752, 790, 1256, 1280, 1328, 1543
FriOI GRGCYC 4 cut(s) 101, 228, 261, 1254
FspI TGCGCA 1 cut(s) 171
GlaI GCGC 6 cut(s) 137, 148, 161, 171, 622, 1325
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 1 cut(s) 1719
HaeIII GGCC 6 cut(s) 407, 700, 824, 961, 1300, 1373
HgaI GACGC 3 cut(s) 339, 489, 1070
HhaI GCGC 6 cut(s) 138, 149, 162, 172, 623, 1326
Hin1I GRCGYC 2 cut(s) 416, 500
Hin1II CATG 4 cut(s) 1093, 1457, 1597, 1766
Hin6I GCGC 6 cut(s) 136, 147, 160, 170, 621, 1324
HinP1I GCGC 6 cut(s) 136, 147, 160, 170, 621, 1324
HindIII AAGCTT 1 cut(s) 1358
HphI GGTGA 7 cut(s) 28, 36, 565, 988, 1112, 1489, 1762
Hpy166II GTNNAC 4 cut(s) 801, 1203, 1462, 1809
Hpy188III TCNNGA 7 cut(s) 277, 641, 769, 1105, 1354, 1420, 1637
Hpy8I GTNNAC 4 cut(s) 801, 1203, 1462, 1809
HpyAV CCTTC 7 cut(s) 7, 112, 151, 573, 967, 1303, 1687
HpyCH4III ACNGT 3 cut(s) 798, 812, 1815
HpyCH4IV ACGT 3 cut(s) 195, 416, 1143
HpyCH4V TGCA 4 cut(s) 178, 845, 1429, 1712
HpyF3I CTNAG 5 cut(s) 95, 183, 278, 392, 915
HpySE526I ACGT 3 cut(s) 195, 416, 1143
Hsp92I GRCGYC 2 cut(s) 416, 500
Hsp92II CATG 4 cut(s) 1093, 1457, 1597, 1766
HspAI GCGC 6 cut(s) 136, 147, 160, 170, 621, 1324
Kpn2I TCCGGA 1 cut(s) 640
Ksp22I TGATCA 2 cut(s) 591, 1387
LguI GCTCTTC 2 cut(s) 675, 1641
Lsp1109I GCAGC 5 cut(s) 190, 1059, 1208, 1795, 1798
LweI GCATC 7 cut(s) 774, 1008, 1306, 1416, 1521, 1577, 1699
MaeII ACGT 3 cut(s) 195, 416, 1143
MaeIII GTNAC 4 cut(s) 196, 412, 571, 716
MflI RGATCY 1 cut(s) 758
MhlI GDGCHC 5 cut(s) 101, 228, 261, 270, 1254
MluCI AATT 7 cut(s) 455, 477, 1445, 1515, 1525, 1544, 1577
MlyI GAGTC 8 cut(s) 248, 293, 677, 746, 1022, 1049, 1062, 1611
MmeI TCCRAC 6 cut(s) 405, 447, 483, 656, 831, 1436
Mph1103I ATGCAT 1 cut(s) 847
MroI TCCGGA 1 cut(s) 640
MspA1I CMGCKG 2 cut(s) 388, 1050
MspR9I CCNGG 4 cut(s) 103, 215, 230, 1033
Mva1269I GAATGC 2 cut(s) 847, 1334
MvaI CCWGG 1 cut(s) 215
MvnI CGCG 7 cut(s) 136, 149, 160, 1086, 1326, 1474, 1683
NciI CCSGG 3 cut(s) 103, 230, 1033
NlaIII CATG 4 cut(s) 1093, 1457, 1597, 1766
NlaIV GGNNCC 5 cut(s) 664, 777, 924, 1072, 1224
NmeAIII GCCGAG 4 cut(s) 726, 760, 816, 1636
NmuCI GTSAC 3 cut(s) 196, 412, 571
NsbI TGCGCA 1 cut(s) 171
NsiI ATGCAT 1 cut(s) 847
PaeR7I CTCGAG 1 cut(s) 263
PaqCI CACCTGC 3 cut(s) 55, 163, 1131
PceI AGGCCT 2 cut(s) 824, 1373
PciSI GCTCTTC 2 cut(s) 675, 1641
PcsI WCGNNNNNNNCGW 6 cut(s) 80, 86, 663, 1101, 1344, 1724
PctI GAATGC 2 cut(s) 847, 1334
PfeI GAWTC 8 cut(s) 52, 586, 646, 689, 1364, 1484, 1538, 1704
PfoI TCCNGGA 3 cut(s) 101, 228, 1031
PinAI ACCGGT 1 cut(s) 1110
PleI GAGTC 8 cut(s) 247, 292, 676, 745, 1022, 1048, 1061, 1610
PpsI GAGTC 8 cut(s) 247, 292, 676, 745, 1022, 1048, 1061, 1610
Psp124BI GAGCTC 4 cut(s) 101, 228, 261, 1254
Psp6I CCWGG 1 cut(s) 213
PspEI GGTNACC 1 cut(s) 571
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 1 cut(s) 213
PspN4I GGNNCC 5 cut(s) 664, 777, 924, 1072, 1224
PspPI GGNCC 2 cut(s) 1409, 1634
PspXI VCTCGAGB 1 cut(s) 263
PstNI CAGNNNCTG 2 cut(s) 391, 562
PsuI RGATCY 1 cut(s) 758
RsaI GTAC 5 cut(s) 152, 1259, 1592, 1686, 1767
RsaNI GTAC 5 cut(s) 151, 1258, 1591, 1685, 1766
SacI GAGCTC 4 cut(s) 101, 228, 261, 1254
SapI GCTCTTC 2 cut(s) 675, 1641
Sau96I GGNCC 2 cut(s) 1409, 1634
SchI GAGTC 8 cut(s) 248, 293, 677, 746, 1022, 1049, 1062, 1611
ScrFI CCNGG 4 cut(s) 103, 215, 230, 1033
SduI GDGCHC 5 cut(s) 101, 228, 261, 270, 1254
SfaNI GCATC 7 cut(s) 774, 1008, 1306, 1416, 1521, 1577, 1699
Sfr274I CTCGAG 1 cut(s) 263
SinI GGWCC 2 cut(s) 1409, 1634
SlaI CTCGAG 1 cut(s) 263
SmlI CTYRAG 3 cut(s) 263, 1352, 1418
SmoI CTYRAG 3 cut(s) 263, 1352, 1418
Sse9I AATT 7 cut(s) 455, 477, 1445, 1515, 1525, 1544, 1577
SseBI AGGCCT 2 cut(s) 824, 1373
SstI GAGCTC 4 cut(s) 101, 228, 261, 1254
StuI AGGCCT 2 cut(s) 824, 1373
StyD4I CCNGG 4 cut(s) 101, 213, 228, 1031
TaaI ACNGT 3 cut(s) 798, 812, 1815
TaiI ACGT 3 cut(s) 198, 419, 1146
TaqII GACCGA 1 cut(s) 277
TasI AATT 7 cut(s) 455, 477, 1445, 1515, 1525, 1544, 1577
TatI WGTACW 2 cut(s) 1590, 1765
TauI GCSGC 8 cut(s) 190, 377, 391, 790, 868, 871, 923, 1334
TfiI GAWTC 8 cut(s) 52, 586, 646, 689, 1364, 1484, 1538, 1704
TseFI GTSAC 3 cut(s) 196, 412, 571
TseI GCWGC 5 cut(s) 178, 1047, 1196, 1783, 1786
Tsp45I GTSAC 3 cut(s) 196, 412, 571
TspDTI ATGAA 4 cut(s) 1153, 1284, 1601, 1610
TspGWI ACGGA 4 cut(s) 215, 269, 900, 1154
VpaK11BI GGWCC 2 cut(s) 1409, 1634
XagI CCTNNNNNAGG 1 cut(s) 218
XapI RAATTY 3 cut(s) 477, 1515, 1544
XhoI CTCGAG 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 1808
ZraI GACGTC 1 cut(s) 417
Zsp2I ATGCAT 1 cut(s) 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.