pycom05g28050

Protein CHUP1, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0012111
Physical Location & Seq
Reverse (-)
28876175 .. 28879736
3562 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g28050.6

Sequence Viewer

Length: 1830 bp
ATGGTTGCTGGGAAGGTGAGGGTGGCAATGGGGCTACAGAAATCGCCGGCGAATCCCAAACCGGAAACTCCTTCAAAGTCTCCGTTGCCGTCGTTGAGCTCTGGGAAGACACCCCAGAAGGGGGCGGTGTTCTCGCGCTCCTTTGGTGTATACTTTCCACGCTCCTCCGCGCAGGTGCAGCCTAAGCCGCCGGACGTGACGGAGCTGCTCCGACTGGTGGAGGAGCTCCGGGAGCGAGAGTCGAGGCTGAAGACGGAGCTTCTGGAGCACAAGCTCCTGAGAGAGTCGGTCGCCATCATCCCCGTCTTGGAGAACGAGATTATTAGCAAGAATGAAGAGATTGATAGAGCGTCGAAGCGGGTGGAGGAGCTGGCGGCGGAGAACGAGCGGCTGAGTAATCAGGTGGCGGAAGTAACGTCAGCGTTGGAGGAAGAGAGGAGGGGGAAAGAAGAGAAATTGAAGCGATTGGAGGCTGAAATTTCGGAGCTGAAGAAAACGACGTCGGATCGTATGATTAATTTCGAAAGCGACGAGCTTTCGTCGTCACAGAGATTTCAGGGACTGATGGAGATCACCGGAAGGTCGAATCTGATCAGAAATTTGAAGAGGGGAGTGAAATGCGCGGACATTCCGACGAATCCGGAGAATCAGAAGCTCGACGGCTCCGAGTCGAAGAGGGAAGAGCCGGAATCGGAGAGGCCGAGGCTCTCGCGGTGTAACTCGGAGGAGTTCGCCGAGTCGACTCTGGCTACCATCAGATCTCGCATCCCGAGGGTTCCTAAACCGCCGCCGAGACCTTCGACATCCAACGGTCAAAAGACTCAAAACAAGGCCTCAACAGAACAAGGTATTGCATTTCCACCACCGCCTCCGCCGCCACCAAGTCAGACAAAATCCGCACTCCCACCGCCACCTCCGCCTTCTAAGGCGGCTCCACCTCCACCTCCTCCGCCACCGAGAGGTATAAGGCCGGCGACGGCAAAGGTCAAGCGAGTGCCGGAGGTTGTCGAATTTTACCACTCTTTGATGCGAAGAGACTCTCGGAGGGAGTCGGGCAGCGGAGTCTCCGACGCAACGGGAACCGCCAATGCCCGCGACATGATCGGCGAGATCGAGAACCGGTCGGCTCACCTGCTCGCTATAAAAACGGACGTAGAAATGCAGGGAGATTTCATTAGGTTTTTGATAAAAGAAGTTGAAAACGCAGCGTTTTCTGACATCAACGATGTGGTGCCTTTTGTGAAATGGCTGGATGATGAGCTCTCATACTTGGTGGATGAAAGAGCTGTGCTGAAGCATTTTGACTGGCCGGAGCAGAAAGCCGATGCCCTGCGCGAAGCGGCATTTGGGTATTGTGACCTCAAGAAGCTTGAATCCGAGGCCTCGTCGTTCCCTGATCATTCTCGCCAGCCCTGCGGTCCAACCCTCAAAAAGATGCAGGCTTTGCTGGAAAAATTGGAGCATGGTGTTTACAATCTCTCGCGGATGAGAGATTCCGCCACTAAAAGATACAAAGTTTTCCAAATTCCTACAAATTGGATGCTCGATTCTGAATTTGTAAGCCAGATCAAGTTGGCATCGGTAAAATTGGCAATGAAGTACATGAAGAGAGTCTCTGCTGAGCTTGAAATTGTAGGTGGTGTTCCCGAAGAAGAAGAGCTGATAGTTCAAGGCGTTCGATTTGCCTTCCGCGTACATCAGTTTGCTGGAGGATTCGATGCAGAAACAATGAGAGCGTTCCAGGTGTTGAGAGATAAAGTGAGATCGTGCCATGTACAATGCCAGAACCAACAGCAGCAGAAAATCGTATGCCGATCTACGCCGTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

610

Amino Acids

68.4

Weight (kDa)

8.87

Isoelectric Point (pI)

56.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012111)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G18570 AT4G18570
fragaria_vesca FvH4_3g08000
malus_domestica MD05G1303500.v1.1 MD10G1282700.v1.1
prunus_persica Prupe.4G059200_v2.0.a1
pyrus_communis pycom05g28050 pycom10g23580
rosa_chinensis RchiOBHm_Chr5g0010311
rosa_laevigata RLG00000031736
rosa_multiflora Rmu_co8025906.1_g000001 Rmu_sc0012578.1_g000002
rosa_roxburghii Rroxscaffold_1G00065940
rosa_rugosa Rorug04G0450100
rosa_samantha Rh5AG081200 Rh5BG076100 Rh5CG089400 Rh5DG076800
rosa_wichuraiana Rw5G007520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 163, 1140
AatII GACGTC 1 cut(s) 503
Acc36I ACCTGC 2 cut(s) 163, 1140
AccB1I GGYRCC 1 cut(s) 1231
AccBSI CCGCTC 1 cut(s) 388
AccI GTMKAC 2 cut(s) 150, 740
AccII CGCG 8 cut(s) 136, 170, 623, 712, 1095, 1335, 1483, 1692
AccIII TCCGGA 1 cut(s) 640
AclWI GGATC 1 cut(s) 513
AcoI YGGCCR 1 cut(s) 1307
AcsI RAATTY 5 cut(s) 477, 598, 1010, 1524, 1553
AcuI CTGAAG 3 cut(s) 269, 509, 1313
AcyI GRCGYC 1 cut(s) 500
AfaI GTAC 3 cut(s) 1601, 1695, 1776
AfiI CCNNNNNNNGG 6 cut(s) 119, 120, 121, 217, 307, 959
AgeI ACCGGT 1 cut(s) 1119
AgsI TTSAA 7 cut(s) 75, 460, 604, 1199, 1373, 1628, 1670
AjiI CACGTC 1 cut(s) 196
AjnI CCWGG 1 cut(s) 1740
AjuI GAANNNNNNNTTGG 2 cut(s) 1329, 1361
Alw21I GWGCWC 4 cut(s) 101, 228, 270, 1263
Alw26I GTCTC 5 cut(s) 84, 787, 1029, 1069, 1618
AlwI GGATC 1 cut(s) 513
AlwNI CAGNNNCTG 1 cut(s) 562
Ama87I CYCGRG 1 cut(s) 769
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 5 cut(s) 698, 831, 968, 1307, 1380
ApeKI GCWGC 5 cut(s) 178, 205, 1056, 1205, 1795
ApoI RAATTY 5 cut(s) 477, 598, 1010, 1524, 1553
AseI ATTAAT 1 cut(s) 516
AsiGI ACCGGT 1 cut(s) 1119
AspLEI GCGC 4 cut(s) 138, 172, 623, 1335
AspS9I GGNCC 1 cut(s) 1418
AsuC2I CCSGG 1 cut(s) 230
AsuHPI GGTGA 3 cut(s) 28, 565, 1121
AsuII TTCGAA 1 cut(s) 522
AvaI CYCGRG 1 cut(s) 769
AvaII GGWCC 1 cut(s) 1418
BanI GGYRCC 1 cut(s) 1231
BanII GRGCYC 3 cut(s) 101, 228, 1263
BbsI GAAGAC 2 cut(s) 113, 257
Bbv12I GWGCWC 4 cut(s) 101, 228, 270, 1263
BbvI GCAGC 5 cut(s) 190, 192, 1068, 1217, 1807
BccI CCATC 3 cut(s) 302, 559, 761
BceAI ACGGC 4 cut(s) 73, 676, 993, 1807
BciT130I CCWGG 1 cut(s) 1742
BclI TGATCA 2 cut(s) 591, 1396
BcnI CCSGG 1 cut(s) 230
BcoDI GTCTC 5 cut(s) 84, 787, 1029, 1069, 1618
BfmI CTRYAG 1 cut(s) 35
BfuAI ACCTGC 2 cut(s) 163, 1140
BglII AGATCT 1 cut(s) 758
BlpI GCTNAGC 1 cut(s) 1620
Bme1390I CCNGG 2 cut(s) 230, 1742
Bme18I GGWCC 1 cut(s) 1418
BmeT110I CYCGRG 1 cut(s) 769
BmgBI CACGTC 1 cut(s) 196
BmgT120I GGNCC 1 cut(s) 1418
BmiI GGNNCC 5 cut(s) 664, 777, 933, 1081, 1233
BmrFI CCNGG 2 cut(s) 230, 1742
BmsI GCATC 7 cut(s) 774, 1017, 1315, 1425, 1530, 1586, 1708
BpiI GAAGAC 2 cut(s) 113, 257
BpmI CTGGAG 2 cut(s) 284, 1728
Bpu10I CCTNAGC 1 cut(s) 183
Bpu1102I GCTNAGC 1 cut(s) 1620
Bpu14I TTCGAA 1 cut(s) 522
BpuEI CTTGAG 1 cut(s) 1346
BpuMI CCSGG 1 cut(s) 230
BsaBI GATNNNNATC 1 cut(s) 569
BsaHI GRCGYC 1 cut(s) 500
BsaI GGTCTC 1 cut(s) 787
BsaJI CCNNGG 3 cut(s) 701, 770, 1377
BsaWI WCCGGW 4 cut(s) 61, 575, 640, 1119
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 6 cut(s) 119, 120, 121, 217, 307, 959
Bse118I RCCGGY 3 cut(s) 46, 970, 1119
Bse1I ACTGG 2 cut(s) 219, 1310
Bse3DI GCAATG 2 cut(s) 33, 1599
Bse8I GATNNNNATC 1 cut(s) 569
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 1 cut(s) 1742
BseDI CCNNGG 3 cut(s) 701, 770, 1377
BseGI GGATG 7 cut(s) 297, 765, 803, 1258, 1282, 1491, 1545
BseJI GATNNNNATC 1 cut(s) 569
BseLI CCNNNNNNNGG 6 cut(s) 119, 120, 121, 217, 307, 959
BseMI GCAATG 2 cut(s) 33, 1599
BseMII CTCAG 3 cut(s) 269, 383, 1611
BseNI ACTGG 2 cut(s) 219, 1310
BseRI GAGGAG 6 cut(s) 154, 236, 380, 451, 740, 936
BseXI GCAGC 5 cut(s) 190, 192, 1068, 1217, 1807
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 1 cut(s) 197
Bsh1236I CGCG 8 cut(s) 136, 170, 623, 712, 1095, 1335, 1483, 1692
Bsh1285I CGRYCG 2 cut(s) 291, 1124
BshFI GGCC 5 cut(s) 700, 833, 970, 1309, 1382
BshNI GGYRCC 1 cut(s) 1231
BshTI ACCGGT 1 cut(s) 1119
BsiEI CGRYCG 2 cut(s) 291, 1124
BsiHKAI GWGCWC 4 cut(s) 101, 228, 270, 1263
BsiHKCI CYCGRG 1 cut(s) 769
BslFI GGGAC 1 cut(s) 573
BslI CCNNNNNNNGG 6 cut(s) 119, 120, 121, 217, 307, 959
BsmAI GTCTC 5 cut(s) 84, 787, 1029, 1069, 1618
BsmFI GGGAC 1 cut(s) 573
BsnI GGCC 5 cut(s) 700, 833, 970, 1309, 1382
Bso31I GGTCTC 1 cut(s) 787
BsoBI CYCGRG 1 cut(s) 769
Bsp119I TTCGAA 1 cut(s) 522
Bsp1286I GDGCHC 4 cut(s) 101, 228, 270, 1263
Bsp13I TCCGGA 1 cut(s) 640
Bsp1407I TGTACA 1 cut(s) 1774
Bsp1720I GCTNAGC 1 cut(s) 1620
BspANI GGCC 5 cut(s) 700, 833, 970, 1309, 1382
BspCNI CTCAG 3 cut(s) 270, 384, 1612
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 8 cut(s) 136, 170, 623, 712, 1095, 1335, 1483, 1692
BspLI GGNNCC 5 cut(s) 664, 777, 933, 1081, 1233
BspMI ACCTGC 2 cut(s) 163, 1140
BspPI GGATC 1 cut(s) 513
BspQI GCTCTTC 2 cut(s) 675, 1650
BspT104I TTCGAA 1 cut(s) 522
BspT107I GGYRCC 1 cut(s) 1231
BspTNI GGTCTC 1 cut(s) 787
BsrBI CCGCTC 1 cut(s) 388
BsrDI GCAATG 2 cut(s) 33, 1599
BsrFI RCCGGY 3 cut(s) 46, 970, 1119
BsrGI TGTACA 1 cut(s) 1774
BsrI ACTGG 2 cut(s) 219, 1310
BssAI RCCGGY 3 cut(s) 46, 970, 1119
BssECI CCNNGG 3 cut(s) 701, 770, 1377
BssNAI GTATAC 1 cut(s) 151
BssNI GRCGYC 1 cut(s) 500
Bst1107I GTATAC 1 cut(s) 151
Bst2UI CCWGG 1 cut(s) 1742
Bst4CI ACNGT 1 cut(s) 812
Bst6I CTCTTC 9 cut(s) 330, 426, 444, 599, 668, 675, 1027, 1601, 1650
BstACI GRCGYC 1 cut(s) 500
BstAPI GCANNNNNTGC 1 cut(s) 1444
BstAUI TGTACA 1 cut(s) 1774
BstBI TTCGAA 1 cut(s) 522
BstC8I GCNNGC 7 cut(s) 48, 372, 972, 1093, 1137, 1409, 1440
BstDEI CTNAG 5 cut(s) 183, 278, 392, 924, 1620
BstF5I GGATG 7 cut(s) 297, 765, 803, 1258, 1282, 1491, 1545
BstFNI CGCG 8 cut(s) 136, 170, 623, 712, 1095, 1335, 1483, 1692
BstHHI GCGC 4 cut(s) 138, 172, 623, 1335
BstMAI GTCTC 5 cut(s) 84, 787, 1029, 1069, 1618
BstMCI CGRYCG 2 cut(s) 291, 1124
BstMWI GCNNNNNNNGC 9 cut(s) 178, 184, 187, 232, 265, 874, 916, 1413, 1444
BstNI CCWGG 1 cut(s) 1742
BstSCI CCNGG 2 cut(s) 228, 1740
BstSFI CTRYAG 1 cut(s) 35
BstUI CGCG 8 cut(s) 136, 170, 623, 712, 1095, 1335, 1483, 1692
BstV1I GCAGC 5 cut(s) 190, 192, 1068, 1217, 1807
BstV2I GAAGAC 2 cut(s) 113, 257
BstX2I RGATCY 1 cut(s) 758
BstYI RGATCY 1 cut(s) 758
BstZ17I GTATAC 1 cut(s) 151
BsuRI GGCC 5 cut(s) 700, 833, 970, 1309, 1382
BtrI CACGTC 1 cut(s) 196
BtsCI GGATG 7 cut(s) 297, 765, 803, 1258, 1282, 1491, 1545
BveI ACCTGC 2 cut(s) 163, 1140
Cac8I GCNNGC 7 cut(s) 48, 372, 972, 1093, 1137, 1409, 1440
CaiI CAGNNNCTG 1 cut(s) 562
CfoI GCGC 4 cut(s) 138, 172, 623, 1335
Cfr10I RCCGGY 3 cut(s) 46, 970, 1119
Cfr13I GGNCC 1 cut(s) 1418
CseI GACGC 2 cut(s) 339, 1079
Csp6I GTAC 3 cut(s) 1600, 1694, 1775
CspAI ACCGGT 1 cut(s) 1119
CviAII CATG 4 cut(s) 1099, 1463, 1603, 1772
CviQI GTAC 3 cut(s) 1600, 1694, 1775
DdeI CTNAG 5 cut(s) 183, 278, 392, 924, 1620
EaeI YGGCCR 1 cut(s) 1307
Eam1104I CTCTTC 9 cut(s) 330, 426, 444, 599, 668, 675, 1027, 1601, 1650
EarI CTCTTC 9 cut(s) 330, 426, 444, 599, 668, 675, 1027, 1601, 1650
EciI GGCGGA 6 cut(s) 392, 422, 861, 906, 939, 1486
Ecl136II GAGCTC 3 cut(s) 99, 226, 1261
Eco147I AGGCCT 2 cut(s) 833, 1382
Eco24I GRGCYC 3 cut(s) 101, 228, 1263
Eco31I GGTCTC 1 cut(s) 787
Eco47I GGWCC 1 cut(s) 1418
Eco53kI GAGCTC 3 cut(s) 99, 226, 1261
Eco57I CTGAAG 3 cut(s) 269, 509, 1313
Eco88I CYCGRG 1 cut(s) 769
EcoICRI GAGCTC 3 cut(s) 99, 226, 1261
EcoRII CCWGG 1 cut(s) 1740
EcoT38I GRGCYC 3 cut(s) 101, 228, 1263
FaeI CATG 4 cut(s) 1102, 1466, 1606, 1775
FaqI GGGAC 1 cut(s) 573
FatI CATG 4 cut(s) 1098, 1462, 1602, 1771
FauI CCCGC 2 cut(s) 351, 1100
FbaI TGATCA 2 cut(s) 591, 1396
FblI GTMKAC 2 cut(s) 150, 740
FokI GGATG 7 cut(s) 284, 752, 790, 1265, 1289, 1498, 1552
FriOI GRGCYC 3 cut(s) 101, 228, 1263
GlaI GCGC 4 cut(s) 137, 171, 622, 1334
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 2 cut(s) 284, 1728
HaeIII GGCC 5 cut(s) 700, 833, 970, 1309, 1382
HgaI GACGC 2 cut(s) 339, 1079
HhaI GCGC 4 cut(s) 138, 172, 623, 1335
Hin1I GRCGYC 1 cut(s) 500
Hin1II CATG 4 cut(s) 1102, 1466, 1606, 1775
Hin6I GCGC 4 cut(s) 136, 170, 621, 1333
HinP1I GCGC 4 cut(s) 136, 170, 621, 1333
HincII GTYRAC 1 cut(s) 741
HindII GTYRAC 1 cut(s) 741
HindIII AAGCTT 1 cut(s) 1367
HphI GGTGA 3 cut(s) 28, 565, 1121
Hpy166II GTNNAC 3 cut(s) 151, 741, 1471
Hpy188III TCNNGA 7 cut(s) 263, 277, 641, 769, 1114, 1363, 1646
Hpy8I GTNNAC 3 cut(s) 151, 741, 1471
HpyAV CCTTC 7 cut(s) 7, 81, 112, 573, 807, 930, 1696
HpyCH4III ACNGT 1 cut(s) 812
HpyCH4IV ACGT 4 cut(s) 195, 416, 500, 1152
HpyCH4V TGCA 5 cut(s) 178, 854, 1162, 1438, 1721
HpyF10VI GCNNNNNNNGC 9 cut(s) 178, 184, 187, 232, 265, 874, 916, 1413, 1444
HpyF3I CTNAG 5 cut(s) 183, 278, 392, 924, 1620
HpySE526I ACGT 4 cut(s) 195, 416, 500, 1152
Hsp92I GRCGYC 1 cut(s) 500
Hsp92II CATG 4 cut(s) 1102, 1466, 1606, 1775
HspAI GCGC 4 cut(s) 136, 170, 621, 1333
Kpn2I TCCGGA 1 cut(s) 640
KroI GCCGGC 2 cut(s) 46, 970
KroNI GCCGGC 2 cut(s) 48, 972
Ksp22I TGATCA 2 cut(s) 591, 1396
LguI GCTCTTC 2 cut(s) 675, 1650
Lsp1109I GCAGC 5 cut(s) 190, 192, 1068, 1217, 1807
LweI GCATC 7 cut(s) 774, 1017, 1315, 1425, 1530, 1586, 1708
MaeII ACGT 4 cut(s) 195, 416, 500, 1152
MaeIII GTNAC 5 cut(s) 196, 412, 543, 716, 1355
MbiI CCGCTC 1 cut(s) 388
MflI RGATCY 1 cut(s) 758
MhlI GDGCHC 4 cut(s) 101, 228, 270, 1263
MmeI TCCRAC 7 cut(s) 235, 405, 483, 656, 831, 1092, 1445
MreI CGCCGGCG 1 cut(s) 46
MroI TCCGGA 1 cut(s) 640
MroNI GCCGGC 2 cut(s) 46, 970
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 1 cut(s) 1059
MspR9I CCNGG 2 cut(s) 230, 1742
MvaI CCWGG 1 cut(s) 1742
MvnI CGCG 8 cut(s) 136, 170, 623, 712, 1095, 1335, 1483, 1692
MwoI GCNNNNNNNGC 9 cut(s) 178, 184, 187, 232, 265, 874, 916, 1413, 1444
NaeI GCCGGC 2 cut(s) 48, 972
NciI CCSGG 1 cut(s) 230
NgoMIV GCCGGC 2 cut(s) 46, 970
NlaIII CATG 4 cut(s) 1102, 1466, 1606, 1775
NlaIV GGNNCC 5 cut(s) 664, 777, 933, 1081, 1233
NmeAIII GCCGAG 3 cut(s) 726, 760, 816
NmuCI GTSAC 3 cut(s) 196, 543, 1355
NspV TTCGAA 1 cut(s) 522
PaqCI CACCTGC 2 cut(s) 163, 1140
PceI AGGCCT 2 cut(s) 833, 1382
PciSI GCTCTTC 2 cut(s) 675, 1650
PcsI WCGNNNNNNNCGW 4 cut(s) 528, 663, 698, 1110
PdiI GCCGGC 2 cut(s) 48, 972
PfeI GAWTC 9 cut(s) 52, 586, 637, 646, 689, 1373, 1493, 1547, 1713
PfoI TCCNGGA 1 cut(s) 228
PinAI ACCGGT 1 cut(s) 1119
PshBI ATTAAT 1 cut(s) 516
Psp124BI GAGCTC 3 cut(s) 101, 228, 1263
Psp6I CCWGG 1 cut(s) 1740
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 1 cut(s) 1740
PspN4I GGNNCC 5 cut(s) 664, 777, 933, 1081, 1233
PspPI GGNCC 1 cut(s) 1418
PsrI GAACNNNNNNTAC 2 cut(s) 1626, 1658
PstNI CAGNNNCTG 1 cut(s) 562
PsuI RGATCY 1 cut(s) 758
RsaI GTAC 3 cut(s) 1601, 1695, 1776
RsaNI GTAC 3 cut(s) 1600, 1694, 1775
SacI GAGCTC 3 cut(s) 101, 228, 1263
SalI GTCGAC 1 cut(s) 739
SapI GCTCTTC 2 cut(s) 675, 1650
SaqAI TTAA 1 cut(s) 516
Sau96I GGNCC 1 cut(s) 1418
ScrFI CCNGG 2 cut(s) 230, 1742
SduI GDGCHC 4 cut(s) 101, 228, 270, 1263
SfaNI GCATC 7 cut(s) 774, 1017, 1315, 1425, 1530, 1586, 1708
SfcI CTRYAG 1 cut(s) 35
SfuI TTCGAA 1 cut(s) 522
SgrAI CRCCGGYG 1 cut(s) 46
SinI GGWCC 1 cut(s) 1418
SmlI CTYRAG 1 cut(s) 1361
SmoI CTYRAG 1 cut(s) 1361
SseBI AGGCCT 2 cut(s) 833, 1382
SstI GAGCTC 3 cut(s) 101, 228, 1263
StuI AGGCCT 2 cut(s) 833, 1382
StyD4I CCNGG 2 cut(s) 228, 1740
TaaI ACNGT 1 cut(s) 812
TaiI ACGT 4 cut(s) 198, 419, 503, 1155
TaqII GACCGA 1 cut(s) 277
TatI WGTACW 2 cut(s) 1599, 1774
TauI GCSGC 7 cut(s) 190, 377, 391, 790, 877, 932, 1343
TfiI GAWTC 9 cut(s) 52, 586, 637, 646, 689, 1373, 1493, 1547, 1713
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TseFI GTSAC 3 cut(s) 196, 543, 1355
TseI GCWGC 5 cut(s) 178, 205, 1056, 1205, 1795
Tsp45I GTSAC 3 cut(s) 196, 543, 1355
TspDTI ATGAA 5 cut(s) 348, 1162, 1293, 1610, 1619
TspGWI ACGGA 4 cut(s) 72, 215, 269, 1163
VpaK11BI GGWCC 1 cut(s) 1418
VspI ATTAAT 1 cut(s) 516
XapI RAATTY 5 cut(s) 477, 598, 1010, 1524, 1553
XmiI GTMKAC 2 cut(s) 150, 740
ZraI GACGTC 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.