Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0005368

Physical Location & Seq

Genomic Coordinates Reverse (-)

5477957 .. 5483283

Gene Structure 5327 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g09390.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2757 bp

ATGCAAAGAGCAATGCTCACCTCCCTCACTCCATTCAACCTAACCTTCTCCAAACCCACCGCCATCGCCGCCGCCGCCGCCGTCGCTCACTTCTCTCTCCCCGGCTCGCCTGACTCAAACCCCAACCATCGCACCCTCGCCCACTCCCTCCAATCCGAAACCCTCGAAATCCTCGAATGGGCCTCCGTCTGCGACCGCCTCTCCGCTCTCGCCTCCACCTCCATGGGCTTCTCCGCCGCTCAGAACGCCCGAATTCCCCTCGGAAAATCCAAGTCCGAGAGCCTGAAGCTTCTAGATCAAACCGCCGCCGCGATCTCCGCCATCGCAGAGATCGGTTCTCCGCCGTCGGATTTCCACTCCGTCGAGGACGTCTCGGAGATCGTAAACGCCGCCGTTTCGGGAAAATTGCTCACCGTCAACGAGCTCTGCGCTGTGCGCAGAACACTCATAGCCGCAAAGGCCTTGTTCGAGAAGCTGAAGGCCTTAGCTTCGGGAGCAGATTCTGATAGGTACTTGCCATTGCTTGAAGTACTTGAGGATTGTGATTTTCTAGTGAAGCTGGAGAGGACTATAGGGCTGTGCATAGACTGCAATCTTTTGGAGATTCTCGACACGGCTAGTGAGGACTTGGAGATCATTAGGTTTGAGAAGAAGAGGAACATGGAGAAATTGGATGCTTTGTTGAAGGAAACGTCGTCTAAGATATTTAAGGCCGGTGGGATTGATAGTCCTTTGGTGACGAAGCGCAGGGCGAGGATGTGTGTGGGTGTTAGAGCTAGGTACAAGTATTTGGTTCCCGATGGTGTGGTGTTGGAAGCTAGTAGTTCTGGTGTGACGTACTTCATGGAGCCGAGTGAGGCGGTGGAGTTGAACAACATGGAAGTGAGGCTTTCGAATGCTGAGAAGGCTGAGGAGATAGGCATTTTGAGCTTCCTTACGTCGGAAGTTGCAAAATCTGAAGCGGAGATAGTGTATTTGTTGGATAAGATTGTAGAGGCTGATCTTGCTTTTGCGAGAGCTGCTTATGCTCGGTGGATGAATGGGGTACGCCCAATTTTCAGTTCCATGGATGACAACGGTTTAGATAATGGTGCCACTGAACTTGGGATGTCGGTAGATGTTGAAGGAATACAGCATCCTTTGCTCCTTGAGTCATCTCTTAGAAGTTTGTCTGATGCCGTTGCATCCAGTTCTAGAAGCTCACTTTCCTCCAAAGACCGAAATGATGTAAAAATGGTCTATCGAAGTTTATCTAGTGGTGTATCTGATTTTCCAGTGCCGATAGATATCAAAATTGGATATGGAACCAGAGTGGTTGTAATCTCAGGGCCTAATACTGGCGGGAAAACAGCTTCCATGAAAACTTTGGGCCTGGCATCTCTTATGTCAAAAGCTGGAATGTATTTGCCTGCTAAAAGCCAGCCAAGACTTCCATGGTTTGATCTTGTTCTAGCTGATATTGGAGATCAACAGTCTCTTGAGCAAAGCCTCTCAACATTTAGTGGACACATATCAAGGATCCGTAATATTTTGGAAGTCGCCTCAAAAGAATCACTTGTCCTCATTGATGAAATTGGTAGTGGAACTGATCCTTCAGAAGGCGTGGCTCTTTCTACCAGCATCTTGCAGTATCTCAAAGATCGTGTTAACTTAGCTGTTGTTACTACTCATTATGCGGACTTAAGTCTACTAAAAGAAAAGGATCACCAGTTTGAAAATGCAGCCATGGAGTTTTCTTCAGAAACCTTATTACCAACTTATCGGGTCCTATGGGGAAGTATTGGTGATTCAAATGCATTGAGTATTGCTAAATCAATTGGTTTTAACCAACAAGTAATTGAGCGTGCACAAGATTGGGTGGAAAGGTTAAGGCCAGAAAAGCAGCAAGAGCGTAAAGGTATGCTTTATCGGTCATTAATAGAGGAAAGAAACAGACTGGAAGCTCAAGCTAAGATGGCAGCGACTCTTCATTCAGAAACCAGGGATATTTATCGTGAGATCCAAGATGAGGCAGAAGATCTTGACATGCGCAAGAGAGCTCTTATGGAAAAGGAAACCCTACAGGTTCGGAAAGAAGTGAAGATTGTCAAATCTCAATTGGAAGCTGTGCTTCAGGAGTTCGATAATCGACTCAAAACTGCCAGTGCTGATCAATTGAATTTGCTGATTAAGAAATCAGAAGCCGCAGTTGCATCTATTATTGAGGCTCACAGTCCTGAAGATGGCTTCTTGGTTAATGAGACATCTGAGACCTCATACACACCTCGATCTGGGGAACAAGTCTATTTGAAGGGACTCAGAGATAAGATAGCTACTGTTGTTGAAGCACCTGGAGATGACGGGACAGTGCTCGTACAATATGGTAAAATTAAGGTTAGGTTGAAGAATAATGAGATCAGAGCTATTCCTAGTAGTGAAAAGAATGCCACGACTAGTTCTGTCCCACGTTTGAAGCAGCAGGTTTGGCAGAGCCGTACTGTGGAAAGCAAAGATGGGGAGGTTTCTTATAGTCCAGCGATACAAACATCAAAGAACACAGTGGATCTCCGTGGCATGAGGGCAGAGGAAGCTTCTTACAATCTGGACATGGCCATCGCGTCTAGAGAGTCTCAGTCAGTTCTTTTTGTTGTACATGGGATGGGCACAGGGGTTATCAAAGAGCGAGCACTTGAAATTTTAAGGAAACATCCACGAGTAGCCAAGTTTGAAGCAGAAAGTCCAATGAATTATGGTTGTACTGTTGCTTACATCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032300 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03430 map03430

Pfam Domains

Protein Families

MutS_V Smr

Protein Analysis

919

Amino Acids

100.79

Weight (kDa)

5.59

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_V	PF00488	439 - 623	6.9e-35	MutS domain V
MSSS	PF20297	758 - 799	1.7e-07	MutS2 and Smr-associated SH3 domain
Smr	PF01713	847 - 916	8.9e-11	Smr domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65070 AT1G65070 AT1G65070 AT1G65070
fragaria_vesca	FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390
malus_domestica	MD00G1095300.v1.1
prunus_persica	Prupe.4G045200_v2.0.a1
pyrus_communis	pycom10g24790
rosa_chinensis	RchiOBHm_Chr5g0008191
rosa_laevigata	RLG00000031545
rosa_multiflora	Rmu_co8487121.1_g000001 Rmu_sc0001352.1_g000007 Rmu_sc0001352.1_g000008 Rmu_sc0001352.1_g000029 Rmu_sc0001626.1_g000010
rosa_roxburghii	Rroxscaffold_1G00068290
rosa_rugosa	Rorug04G0434000 Rorug04G0434100
rosa_samantha	Rh5AG062400 Rh5BG058700 Rh5CG069200 Rh5DG058100
rosa_wichuraiana	Rw5G005850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	372
Acc16I	TGCGCA	2 cut(s)	437, 2030
Acc36I	ACCTGC	1 cut(s)	2449
AccB1I	GGYRCC	1 cut(s)	1091
AccBSI	CCGCTC	2 cut(s)	206, 239
AccI	GTMKAC	1 cut(s)	1687
AccII	CGCG	2 cut(s)	311, 2597
AclWI	GGATC	6 cut(s)	1513, 1526, 1583, 1710, 1993, 2550
AcoI	YGGCCR	1 cut(s)	2589
AcsI	RAATTY	3 cut(s)	252, 2158, 2673
AcuI	CTGAAG	7 cut(s)	305, 497, 978, 1578, 1722, 2096, 2238
AcyI	GRCGYC	1 cut(s)	369
AfaI	GTAC	9 cut(s)	512, 531, 782, 839, 1047, 2355, 2476, 2631, 2737
AfiI	CCNNNNNNNGG	8 cut(s)	178, 940, 1337, 1598, 2008, 2222, 2270, 2479
AflII	CTTAAG	1 cut(s)	1681
AhlI	ACTAGT	1 cut(s)	2432
AjnI	CCWGG	3 cut(s)	1371, 1979, 2329
AjuI	GAANNNNNNNTTGG	2 cut(s)	1045, 1077
Alw21I	GWGCWC	5 cut(s)	426, 1849, 2041, 2352, 2668
Alw26I	GTCTC	5 cut(s)	376, 1479, 2234, 2243, 2613
Alw44I	GTGCAC	1 cut(s)	1845
AlwI	GGATC	6 cut(s)	1513, 1526, 1583, 1710, 1993, 2550
AlwNI	CAGNNNCTG	1 cut(s)	503
AoxI	GGCC	8 cut(s)	180, 459, 480, 711, 1328, 1369, 1871, 2589
ApaLI	GTGCAC	1 cut(s)	1845
ApeKI	GCWGC	5 cut(s)	1019, 1721, 1882, 1958, 2455
ApoI	RAATTY	3 cut(s)	252, 2158, 2673
AseI	ATTAAT	1 cut(s)	1916
AspLEI	GCGC	4 cut(s)	431, 438, 747, 2031
AspS9I	GGNCC	4 cut(s)	180, 1328, 1369, 1765
AsuC2I	CCSGG	1 cut(s)	102
AsuHPI	GGTGA	5 cut(s)	10, 403, 748, 1697, 1796
AsuII	TTCGAA	1 cut(s)	893
AvaII	GGWCC	1 cut(s)	1765
BaeGI	GKGCMC	2 cut(s)	1849, 2645
BalI	TGGCCA	1 cut(s)	2591
BamHI	GGATCC	1 cut(s)	1518
BanI	GGYRCC	1 cut(s)	1091
BanII	GRGCYC	2 cut(s)	426, 2041
BauI	CACGAG	1 cut(s)	2691
Bbv12I	GWGCWC	5 cut(s)	426, 1849, 2041, 2352, 2668
BbvCI	CCTCAGC	1 cut(s)	909
BbvI	GCAGC	5 cut(s)	1006, 1733, 1894, 1970, 2467
BccI	CCATC	9 cut(s)	71, 135, 329, 794, 1948, 2216, 2486, 2600, 2632
BceAI	ACGGC	6 cut(s)	65, 328, 377, 630, 1163, 2457
BciT130I	CCWGG	3 cut(s)	1373, 1981, 2331
BclI	TGATCA	1 cut(s)	2149
BcnI	CCSGG	1 cut(s)	102
BcoDI	GTCTC	5 cut(s)	376, 1479, 2234, 2243, 2613
BcuI	ACTAGT	1 cut(s)	2432
BfmI	CTRYAG	2 cut(s)	570, 2060
BfrI	CTTAAG	1 cut(s)	1681
BfuAI	ACCTGC	1 cut(s)	2449
BglI	GCCNNNNNGGC	1 cut(s)	458
BglII	AGATCT	1 cut(s)	2017
BmcAI	AGTACT	1 cut(s)	531
Bme1390I	CCNGG	4 cut(s)	102, 1373, 1981, 2331
Bme18I	GGWCC	1 cut(s)	1765
BmgT120I	GGNCC	4 cut(s)	180, 1328, 1369, 1765
BmiI	GGNNCC	6 cut(s)	795, 849, 1093, 1306, 1520, 1766
BmrFI	CCNGG	4 cut(s)	102, 1373, 1981, 2331
BmsI	GCATC	7 cut(s)	664, 1144, 1165, 1193, 1385, 1629, 2201
BoxI	GACNNNNGTC	1 cut(s)	1683
BplI	GAGNNNNNCTC	3 cut(s)	32, 356, 388
BpmI	CTGGAG	2 cut(s)	581, 2352
Bpu10I	CCTNAGC	2 cut(s)	484, 909
Bpu14I	TTCGAA	1 cut(s)	893
BpuEI	CTTGAG	4 cut(s)	554, 1169, 1499, 1929
BpuMI	CCSGG	1 cut(s)	102
BsaBI	GATNNNNATC	2 cut(s)	1286, 1989
BsaHI	GRCGYC	1 cut(s)	369
BsaI	GGTCTC	1 cut(s)	2243
BsaJI	CCNNGG	8 cut(s)	100, 222, 259, 1065, 1433, 1725, 1980, 2548
BsaXI	ACNNNNNCTCC	4 cut(s)	185, 215, 956, 986
Bsc4I	CCNNNNNNNGG	8 cut(s)	178, 940, 1337, 1598, 2008, 2222, 2270, 2479
Bse118I	RCCGGY	1 cut(s)	713
Bse1I	ACTGG	6 cut(s)	1188, 1274, 1342, 1708, 1941, 2142
Bse3DI	GCAATG	2 cut(s)	18, 518
Bse8I	GATNNNNATC	2 cut(s)	1286, 1989
BseBI	CCWGG	3 cut(s)	1373, 1981, 2331
BseDI	CCNNGG	8 cut(s)	100, 222, 259, 1065, 1433, 1725, 1980, 2548
BseGI	GGATG	9 cut(s)	679, 762, 1041, 1075, 1113, 1135, 1184, 2643, 2686
BseJI	GATNNNNATC	2 cut(s)	1286, 1989
BseLI	CCNNNNNNNGG	8 cut(s)	178, 940, 1337, 1598, 2008, 2222, 2270, 2479
BseMI	GCAATG	2 cut(s)	18, 518
BseMII	CTCAG	7 cut(s)	254, 891, 900, 1338, 2238, 2311, 2624
BseNI	ACTGG	6 cut(s)	1188, 1274, 1342, 1708, 1941, 2142
BseRI	GAGGAG	1 cut(s)	926
BseSI	GKGCMC	2 cut(s)	1849, 2645
BseXI	GCAGC	5 cut(s)	1006, 1733, 1894, 1970, 2467
Bsh1236I	CGCG	2 cut(s)	311, 2597
Bsh1285I	CGRYCG	1 cut(s)	196
BshFI	GGCC	8 cut(s)	182, 461, 482, 713, 1330, 1371, 1873, 2591
BshNI	GGYRCC	1 cut(s)	1091
BsiEI	CGRYCG	1 cut(s)	196
BsiHKAI	GWGCWC	5 cut(s)	426, 1849, 2041, 2352, 2668
BsiSI	CCGG	2 cut(s)	102, 714
BslFI	GGGAC	3 cut(s)	2307, 2356, 2426
BslI	CCNNNNNNNGG	8 cut(s)	178, 940, 1337, 1598, 2008, 2222, 2270, 2479
BsmAI	GTCTC	5 cut(s)	376, 1479, 2234, 2243, 2613
BsmBI	CGTCTC	1 cut(s)	376
BsmFI	GGGAC	3 cut(s)	2307, 2356, 2426
BsmI	GAATGC	2 cut(s)	901, 2428
BsnI	GGCC	8 cut(s)	182, 461, 482, 713, 1330, 1371, 1873, 2591
Bso31I	GGTCTC	1 cut(s)	2243
Bsp119I	TTCGAA	1 cut(s)	893
Bsp1286I	GDGCHC	6 cut(s)	426, 1849, 2041, 2352, 2645, 2668
Bsp1407I	TGTACA	1 cut(s)	2629
Bsp19I	CCATGG	4 cut(s)	222, 1065, 1433, 1725
BspANI	GGCC	8 cut(s)	182, 461, 482, 713, 1330, 1371, 1873, 2591
BspCNI	CTCAG	7 cut(s)	253, 892, 901, 1337, 2239, 2310, 2623
BspFNI	CGCG	2 cut(s)	311, 2597
BspLI	GGNNCC	6 cut(s)	795, 849, 1093, 1306, 1520, 1766
BspMI	ACCTGC	1 cut(s)	2449
BspPI	GGATC	6 cut(s)	1513, 1526, 1583, 1710, 1993, 2550
BspT104I	TTCGAA	1 cut(s)	893
BspT107I	GGYRCC	1 cut(s)	1091
BspTI	CTTAAG	1 cut(s)	1681
BspTNI	GGTCTC	1 cut(s)	2243
BsrBI	CCGCTC	2 cut(s)	206, 239
BsrDI	GCAATG	2 cut(s)	18, 518
BsrFI	RCCGGY	1 cut(s)	713
BsrGI	TGTACA	1 cut(s)	2629
BsrI	ACTGG	6 cut(s)	1188, 1274, 1342, 1708, 1941, 2142
BssAI	RCCGGY	1 cut(s)	713
BssECI	CCNNGG	8 cut(s)	100, 222, 259, 1065, 1433, 1725, 1980, 2548
BssNI	GRCGYC	1 cut(s)	369
BssSI	CACGAG	1 cut(s)	2691
BssT1I	CCWWGG	4 cut(s)	222, 1065, 1433, 1725
Bst2BI	CACGAG	1 cut(s)	2691
Bst2UI	CCWGG	3 cut(s)	1373, 1981, 2331
Bst4CI	ACNGT	9 cut(s)	415, 1079, 1473, 2213, 2317, 2347, 2479, 2539, 2740
Bst6I	CTCTTC	2 cut(s)	647, 1971
BstACI	GRCGYC	1 cut(s)	369
BstAFI	CTTAAG	1 cut(s)	1681
BstAPI	GCANNNNNTGC	2 cut(s)	588, 1141
BstAUI	TGTACA	1 cut(s)	2629
BstBI	TTCGAA	1 cut(s)	893
BstC8I	GCNNGC	5 cut(s)	107, 1410, 1421, 1845, 2664
BstDSI	CCRYGG	5 cut(s)	222, 1065, 1433, 1725, 2548
BstENI	CCTNNNNNAGG	1 cut(s)	1596
BstF5I	GGATG	9 cut(s)	679, 762, 1041, 1075, 1113, 1135, 1184, 2643, 2686
BstFNI	CGCG	2 cut(s)	311, 2597
BstHHI	GCGC	4 cut(s)	431, 438, 747, 2031
BstMAI	GTCTC	5 cut(s)	376, 1479, 2234, 2243, 2613
BstMCI	CGRYCG	1 cut(s)	196
BstNI	CCWGG	3 cut(s)	1373, 1981, 2331
BstNSI	RCATGY	1 cut(s)	2029
BstPAI	GACNNNNGTC	1 cut(s)	1683
BstSCI	CCNGG	4 cut(s)	100, 1371, 1979, 2329
BstSFI	CTRYAG	2 cut(s)	570, 2060
BstSLI	GKGCMC	2 cut(s)	1849, 2645
BstUI	CGCG	2 cut(s)	311, 2597
BstV1I	GCAGC	5 cut(s)	1006, 1733, 1894, 1970, 2467
BstX2I	RGATCY	4 cut(s)	1518, 1998, 2017, 2542
BstXI	CCANNNNNNTGG	1 cut(s)	223
BstYI	RGATCY	4 cut(s)	1518, 1998, 2017, 2542
BsuRI	GGCC	8 cut(s)	182, 461, 482, 713, 1330, 1371, 1873, 2591
BtgI	CCRYGG	5 cut(s)	222, 1065, 1433, 1725, 2548
BtgZI	GCGATG	4 cut(s)	49, 113, 307, 2578
BtsCI	GGATG	9 cut(s)	679, 762, 1041, 1075, 1113, 1135, 1184, 2643, 2686
BtsIMutI	CAGTG	5 cut(s)	1095, 1281, 2149, 2352, 2544
BveI	ACCTGC	1 cut(s)	2449
Cac8I	GCNNGC	5 cut(s)	107, 1410, 1421, 1845, 2664
CaiI	CAGNNNCTG	1 cut(s)	503
CfoI	GCGC	4 cut(s)	431, 438, 747, 2031
Cfr10I	RCCGGY	1 cut(s)	713
Cfr13I	GGNCC	4 cut(s)	180, 1328, 1369, 1765
CseI	GACGC	1 cut(s)	2586
Csp6I	GTAC	9 cut(s)	511, 530, 781, 838, 1046, 2354, 2475, 2630, 2736
CspCI	CAANNNNNGTGG	2 cut(s)	1084, 1119
CviQI	GTAC	9 cut(s)	511, 530, 781, 838, 1046, 2354, 2475, 2630, 2736
EaeI	YGGCCR	1 cut(s)	2589
Eam1104I	CTCTTC	2 cut(s)	647, 1971
EarI	CTCTTC	2 cut(s)	647, 1971
EciI	GGCGGA	3 cut(s)	223, 307, 330
Ecl136II	GAGCTC	2 cut(s)	424, 2039
Eco130I	CCWWGG	4 cut(s)	222, 1065, 1433, 1725
Eco147I	AGGCCT	2 cut(s)	461, 482
Eco24I	GRGCYC	2 cut(s)	426, 2041
Eco31I	GGTCTC	1 cut(s)	2243
Eco32I	GATATC	1 cut(s)	1288
Eco47I	GGWCC	1 cut(s)	1765
Eco53kI	GAGCTC	2 cut(s)	424, 2039
Eco57I	CTGAAG	7 cut(s)	305, 497, 978, 1578, 1722, 2096, 2238
EcoICRI	GAGCTC	2 cut(s)	424, 2039
EcoNI	CCTNNNNNAGG	1 cut(s)	1596
EcoO109I	RGGNCCY	2 cut(s)	1328, 1765
EcoRI	GAATTC	1 cut(s)	252
EcoRII	CCWGG	3 cut(s)	1371, 1979, 2329
EcoRV	GATATC	1 cut(s)	1288
EcoT14I	CCWWGG	4 cut(s)	222, 1065, 1433, 1725
EcoT22I	ATGCAT	1 cut(s)	1798
EcoT38I	GRGCYC	2 cut(s)	426, 2041
ErhI	CCWWGG	4 cut(s)	222, 1065, 1433, 1725
Esp3I	CGTCTC	1 cut(s)	376
FalI	AAGNNNNNCTT	8 cut(s)	873, 905, 1539, 1571, 1887, 1919, 2094, 2126
FaqI	GGGAC	3 cut(s)	2307, 2356, 2426
FauI	CCCGC	1 cut(s)	1334
FbaI	TGATCA	1 cut(s)	2149
FblI	GTMKAC	1 cut(s)	1687
FokI	GGATG	9 cut(s)	686, 769, 1048, 1082, 1120, 1122, 1171, 2650, 2673
FriOI	GRGCYC	2 cut(s)	426, 2041
FspI	TGCGCA	2 cut(s)	437, 2030
GlaI	GCGC	4 cut(s)	430, 437, 746, 2030
GsuI	CTGGAG	2 cut(s)	581, 2352
HaeIII	GGCC	8 cut(s)	182, 461, 482, 713, 1330, 1371, 1873, 2591
HapII	CCGG	2 cut(s)	102, 714
HgaI	GACGC	1 cut(s)	2586
HhaI	GCGC	4 cut(s)	431, 438, 747, 2031
Hin1I	GRCGYC	1 cut(s)	369
Hin6I	GCGC	4 cut(s)	429, 436, 745, 2029
HinP1I	GCGC	4 cut(s)	429, 436, 745, 2029
HincII	GTYRAC	2 cut(s)	418, 1648
HindII	GTYRAC	2 cut(s)	418, 1648
HindIII	AAGCTT	2 cut(s)	287, 2568
HpaI	GTTAAC	1 cut(s)	1648
HpaII	CCGG	2 cut(s)	102, 714
HphI	GGTGA	5 cut(s)	10, 403, 748, 1697, 1796
Hpy166II	GTNNAC	6 cut(s)	385, 418, 1505, 1648, 1688, 1847
Hpy8I	GTNNAC	6 cut(s)	385, 418, 1505, 1648, 1688, 1847
Hpy99I	CGWCG	5 cut(s)	86, 349, 365, 697, 943
HpyAV	CCTTC	8 cut(s)	55, 472, 679, 898, 1118, 1592, 1602, 2284
HpyCH4III	ACNGT	9 cut(s)	415, 1079, 1473, 2213, 2317, 2347, 2479, 2539, 2740
HpyCH4IV	ACGT	5 cut(s)	369, 692, 836, 938, 2446
HpySE526I	ACGT	5 cut(s)	369, 692, 836, 938, 2446
Hsp92I	GRCGYC	1 cut(s)	369
HspAI	GCGC	4 cut(s)	429, 436, 745, 2029
Ksp22I	TGATCA	1 cut(s)	2149
KspAI	GTTAAC	1 cut(s)	1648
LmnI	GCTCC	3 cut(s)	494, 847, 1149
Lsp1109I	GCAGC	5 cut(s)	1006, 1733, 1894, 1970, 2467
LweI	GCATC	7 cut(s)	664, 1144, 1165, 1193, 1385, 1629, 2201
MaeII	ACGT	5 cut(s)	369, 692, 836, 938, 2446
MaeIII	GTNAC	3 cut(s)	736, 832, 1660
MbiI	CCGCTC	2 cut(s)	206, 239
MboII	GAAGA	8 cut(s)	661, 664, 1728, 1958, 2027, 2092, 2231, 2395
MfeI	CAATTG	3 cut(s)	1815, 2096, 2153
MflI	RGATCY	4 cut(s)	1518, 1998, 2017, 2542
MhlI	GDGCHC	6 cut(s)	426, 1849, 2041, 2352, 2645, 2668
MlsI	TGGCCA	1 cut(s)	2591
MluNI	TGGCCA	1 cut(s)	2591
MlyI	GAGTC	6 cut(s)	107, 1160, 1957, 2124, 2289, 2615
MmeI	TCCRAC	4 cut(s)	327, 792, 921, 960
Mox20I	TGGCCA	1 cut(s)	2591
Mph1103I	ATGCAT	1 cut(s)	1798
MscI	TGGCCA	1 cut(s)	2591
MslI	CAYNNNNRTG	2 cut(s)	221, 881
Msp20I	TGGCCA	1 cut(s)	2591
MspCI	CTTAAG	1 cut(s)	1681
MspI	CCGG	2 cut(s)	102, 714
MspR9I	CCNGG	4 cut(s)	102, 1373, 1981, 2331
MunI	CAATTG	3 cut(s)	1815, 2096, 2153
Mva1269I	GAATGC	2 cut(s)	901, 2428
MvaI	CCWGG	3 cut(s)	1373, 1981, 2331
MvnI	CGCG	2 cut(s)	311, 2597
NciI	CCSGG	1 cut(s)	102
NcoI	CCATGG	4 cut(s)	222, 1065, 1433, 1725
NlaIV	GGNNCC	6 cut(s)	795, 849, 1093, 1306, 1520, 1766
NmeAIII	GCCGAG	1 cut(s)	876
NmuCI	GTSAC	2 cut(s)	736, 832
NsbI	TGCGCA	2 cut(s)	437, 2030
NsiI	ATGCAT	1 cut(s)	1798
NspI	RCATGY	1 cut(s)	2029
NspV	TTCGAA	1 cut(s)	893
PceI	AGGCCT	2 cut(s)	461, 482
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PctI	GAATGC	2 cut(s)	901, 2428
PfeI	GAWTC	4 cut(s)	500, 604, 1550, 1787
PleI	GAGTC	6 cut(s)	107, 1159, 1957, 2124, 2289, 2614
PpsI	GAGTC	6 cut(s)	107, 1159, 1957, 2124, 2289, 2614
PpuMI	RGGWCCY	1 cut(s)	1765
PshAI	GACNNNNGTC	1 cut(s)	1683
PshBI	ATTAAT	1 cut(s)	1916
Psp124BI	GAGCTC	2 cut(s)	426, 2041
Psp5II	RGGWCCY	1 cut(s)	1765
Psp6I	CCWGG	3 cut(s)	1371, 1979, 2329
PspGI	CCWGG	3 cut(s)	1371, 1979, 2329
PspN4I	GGNNCC	6 cut(s)	795, 849, 1093, 1306, 1520, 1766
PspPI	GGNCC	4 cut(s)	180, 1328, 1369, 1765
PspPPI	RGGWCCY	1 cut(s)	1765
PstNI	CAGNNNCTG	1 cut(s)	503
PsuI	RGATCY	4 cut(s)	1518, 1998, 2017, 2542
RsaI	GTAC	9 cut(s)	512, 531, 782, 839, 1047, 2355, 2476, 2631, 2737
RsaNI	GTAC	9 cut(s)	511, 530, 781, 838, 1046, 2354, 2475, 2630, 2736
RseI	CAYNNNNRTG	2 cut(s)	221, 881
SacI	GAGCTC	2 cut(s)	426, 2041
Sau96I	GGNCC	4 cut(s)	180, 1328, 1369, 1765
ScaI	AGTACT	1 cut(s)	531
SchI	GAGTC	6 cut(s)	107, 1160, 1957, 2124, 2289, 2615
ScrFI	CCNGG	4 cut(s)	102, 1373, 1981, 2331
SduI	GDGCHC	6 cut(s)	426, 1849, 2041, 2352, 2645, 2668
SfaNI	GCATC	7 cut(s)	664, 1144, 1165, 1193, 1385, 1629, 2201
SfcI	CTRYAG	2 cut(s)	570, 2060
SfuI	TTCGAA	1 cut(s)	893
SinI	GGWCC	1 cut(s)	1765
SmiMI	CAYNNNNRTG	2 cut(s)	221, 881
SmlI	CTYRAG	5 cut(s)	533, 1148, 1478, 1681, 1944
SmoI	CTYRAG	5 cut(s)	533, 1148, 1478, 1681, 1944
SpeI	ACTAGT	1 cut(s)	2432
SseBI	AGGCCT	2 cut(s)	461, 482
SspI	AATATT	1 cut(s)	1528
SstI	GAGCTC	2 cut(s)	426, 2041
StuI	AGGCCT	2 cut(s)	461, 482
StyD4I	CCNGG	4 cut(s)	100, 1371, 1979, 2329
StyI	CCWWGG	4 cut(s)	222, 1065, 1433, 1725
TaaI	ACNGT	9 cut(s)	415, 1079, 1473, 2213, 2317, 2347, 2479, 2539, 2740
TaiI	ACGT	5 cut(s)	372, 695, 839, 941, 2449
TaqII	GACCGA	2 cut(s)	1233, 1899
TatI	WGTACW	3 cut(s)	529, 2629, 2735
TfiI	GAWTC	4 cut(s)	500, 604, 1550, 1787
TscAI	CASTG	5 cut(s)	1102, 1281, 2149, 2352, 2544
TseFI	GTSAC	2 cut(s)	736, 832
TseI	GCWGC	5 cut(s)	1019, 1721, 1882, 1958, 2455
Tsp45I	GTSAC	2 cut(s)	736, 832
TspDTI	ATGAA	6 cut(s)	832, 1052, 1373, 1584, 1958, 2738
TspGWI	ACGGA	4 cut(s)	175, 349, 1511, 2537
TspRI	CASTG	5 cut(s)	1102, 1281, 2149, 2352, 2544
Vha464I	CTTAAG	1 cut(s)	1681
VneI	GTGCAC	1 cut(s)	1845
VpaK11BI	GGWCC	1 cut(s)	1765
VspI	ATTAAT	1 cut(s)	1916
XagI	CCTNNNNNAGG	1 cut(s)	1596
XapI	RAATTY	3 cut(s)	252, 2158, 2673
XbaI	TCTAGA	3 cut(s)	292, 1193, 2600
XceI	RCATGY	1 cut(s)	2029
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1363, 1431
XmiI	GTMKAC	1 cut(s)	1687
ZraI	GACGTC	1 cut(s)	370
ZrmI	AGTACT	1 cut(s)	531
Zsp2I	ATGCAT	1 cut(s)	1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.