Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0005368

Physical Location & Seq

Genomic Coordinates Forward (+)

4925698 .. 4928523

Gene Structure 2826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG058100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGAGAAATTGGATGCTTTGTTGAAGGAAATGTCGTCTAAGATATTTAAGGCTGGTGGGATTGACAGTCCTCTGGTGACGAAGCGCAGGGCGAGGATGTGTGTGGGTGTTCGAGCTAGGTACAAGTATTTGGTTCCGGATGGGGTGGTGTTGGATGCTAGTAGTTCTGGTGCGACGTACTTCATGGAGCCGAGTGAGGCGGTGGAGTTGAATAACATGGAAGTGAGGCTTTCGAATGCTGAGAAGGCTGAGGAAATAGGCATTTTGAGCTTCCTTACATCAGAAATTGCAAAATCAGAAGGGGAGATTGTGTATTTGTTAGATAAGATTGTAGAAGTTGATCTTGCTTTTGCTAGAGCTGTGTATGCTCGGTGGATGAATGGGGTATGCCCAATTTTCAGTTCTAAGGATGGCAAGGATTTAGAGAATGGTGGAGCTGAAATTGGGATATCGATAGATATTGAAGGAATACAACATCCTTTGCTCCTTGAGTCATCTCTTAGTAGTTTGTCTGATGCCCTTGCAACCAGTTCTAGAAGCGCACTTTCCTCCAAAGACGGAAATGATGTAAAAATGGTCTATCGAAGTTTATCTAGTGGTGTATCTGATTTTCCAGTGCCAATAGATATCAAAATTGGATATGGAACCAGAGTGGTTGTAATCTCAGGGCCTAATACTGGCGGGAAAACAGCTTCCATGAAAACTTTGGGCCTGGCATCTCTTATGTCGAAAGCTGGAATGTATCTGCCTGCTAAAAGCCAGCCAAAGCTTCCATGGTTTGATCTTGTTCTAGCTGATATTGGAGATCAACAGTCTCTTGAGCAAAGCCTCTCAACATTTAGTGGGCACATATCACGGATCTGTAATATTTTGGAAGTCGCCTCAAAAGAATCACTTGTCCTCATTGATGAAATTGGTAGTGGAACCGATCCTTCAGAAGGTGTGGCTCTTTCTACCAGCATTTTGCAATATCTCAAAGATCACGTTAACTTAGCTGTTGTGACTACTCATTACGCGGATTTAAGTCTTCTAAAAGAAAAGGATCACCAGTTTGAAAATGCAGCCATGGAGTTTTCTCCAGAAACCTTACAACCAACTTATCGGGTCCTATGGGGAAGTATTGGTGACTCAAATGCATTGAGTATTGCTAAATCAATTGGTTTTAATCAACAAATAATTGAACGCGCACAAGATTGGGTGGAAAGATTAAGGCCAGAAAAGCAGCAAGAGCGTAAAGGTTTGCTATATCAGTCATTAATAGAGGAAAGAAACAGACTGGAAGCTCAGGCTAAGATGGCAGCGTCTCTTCATTCAGAAACCAGGGATATTTATCATGAGATCCAGGATGAGGCAGAAGATCTTGACGTGCGCAAGAGAGCTCTTATGGCAAAGGAAACCCTACAGGTTCGGGAAGAAGTGAAGATTGTCAAATCTCAATTGGAAGCTGTGCTTCAGGAGTTTGATAACCGACTCAAAACTGCTGGTGCTGATCAGTTGAATTTGCTGATAAAGAAATCAGAAGCTGCAATTGCATCTATTATTGAGGCTCACAGTCCTGAAGATGGTTTCTTGGTAAATGAGACATCTGAAACTTCATACACACCTCGATTTGGGGAACAAGTCTATTTGAAGGGACTCAGAGATAAGATAGCTACCGTAGTTGAAGCACCTGGAGATGATGGGACAGTGCTCGTACAATATGGTAAAATTAAGGTTAGGTTGAAGAATAATGAGATCAGAGCTATTCCTAGTAGTGATAAGAATGCCGCGACTAGTTCTGTCCCACGTTTGAAGCAGCGGATTTGGCGGAGCCGTACTGTGGAAAACAAAGATGCGGAGGTTTCTTATAGTCCAGCGGTACAAACATCAAAGAACACAGTGGATCTTCGTGGCATGAGGGCGGAGGAAGCTTCTTACAATCTGGACATGGCCATCGCTACTAGAGAGTCTCAGTCAGTTCTTTTTGTTGTACATGGGATGGGCACAGGGGTTGTCAAAGAGCGAGCACTTGAGCTTTTAAAGAAACATCCACGAGTAGCCAAGTATGAAGCGGAAAGTCCAATGAATTATGGTTGTACAGTTGCTTACATCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032300 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03430 map03430

Pfam Domains

Protein Families

MutS_V Smr

Protein Analysis

698

Amino Acids

76.85

Weight (kDa)

5.6

Isoelectric Point (pI)

44.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_V	PF00488	219 - 403	9.2e-35	MutS domain V
MSSS	PF20297	538 - 579	1.3e-07	MutS2 and Smr-associated SH3 domain
Smr	PF01713	627 - 696	2e-10	Smr domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65070 AT1G65070 AT1G65070 AT1G65070
fragaria_vesca	FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390
malus_domestica	MD00G1095300.v1.1
prunus_persica	Prupe.4G045200_v2.0.a1
pyrus_communis	pycom10g24790
rosa_chinensis	RchiOBHm_Chr5g0008191
rosa_laevigata	RLG00000031545
rosa_multiflora	Rmu_co8487121.1_g000001 Rmu_sc0001352.1_g000007 Rmu_sc0001352.1_g000008 Rmu_sc0001352.1_g000029 Rmu_sc0001626.1_g000010
rosa_roxburghii	Rroxscaffold_1G00068290
rosa_rugosa	Rorug04G0434000 Rorug04G0434100
rosa_samantha	Rh5AG062400 Rh5BG058700 Rh5CG069200 Rh5DG058100
rosa_wichuraiana	Rw5G005850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1370
AccII	CGCG	3 cut(s)	1016, 1185, 1769
AccIII	TCCGGA	1 cut(s)	136
AclWI	GGATC	5 cut(s)	866, 923, 1050, 1333, 1890
AcoI	YGGCCR	1 cut(s)	1929
AcsI	RAATTY	1 cut(s)	1498
AcuI	CTGAAG	3 cut(s)	918, 1436, 1578
AfaI	GTAC	7 cut(s)	122, 179, 1695, 1816, 1860, 1971, 2077
AfiI	CCNNNNNNNGG	6 cut(s)	677, 938, 1348, 1562, 1610, 1819
AhlI	ACTAGT	1 cut(s)	1772
AjiI	CACGTC	1 cut(s)	1366
AjnI	CCWGG	4 cut(s)	711, 1319, 1341, 1669
AjuI	GAANNNNNNNTTGG	2 cut(s)	385, 417
Alw21I	GWGCWC	3 cut(s)	1381, 1692, 2008
Alw26I	GTCTC	4 cut(s)	819, 1308, 1574, 1953
AlwI	GGATC	5 cut(s)	866, 923, 1050, 1333, 1890
AlwNI	CAGNNNCTG	1 cut(s)	1523
Aor13HI	TCCGGA	1 cut(s)	136
AoxI	GGCC	4 cut(s)	668, 709, 1211, 1929
ApeKI	GCWGC	5 cut(s)	1061, 1222, 1298, 1523, 1795
ApoI	RAATTY	1 cut(s)	1498
AseI	ATTAAT	1 cut(s)	1256
AspLEI	GCGC	4 cut(s)	87, 542, 1187, 1371
AspS9I	GGNCC	3 cut(s)	668, 709, 1105
AsuHPI	GGTGA	3 cut(s)	88, 1037, 1136
AsuII	TTCGAA	1 cut(s)	233
AvaII	GGWCC	1 cut(s)	1105
BaeGI	GKGCMC	2 cut(s)	849, 1985
BalI	TGGCCA	1 cut(s)	1931
BanII	GRGCYC	1 cut(s)	1381
BauI	CACGAG	1 cut(s)	2031
BbsI	GAAGAC	1 cut(s)	1019
Bbv12I	GWGCWC	3 cut(s)	1381, 1692, 2008
BbvCI	CCTCAGC	1 cut(s)	249
BbvI	GCAGC	5 cut(s)	1073, 1234, 1310, 1510, 1807
BccI	CCATC	7 cut(s)	134, 404, 1288, 1556, 1673, 1940, 1972
BceAI	ACGGC	1 cut(s)	1797
BciT130I	CCWGG	4 cut(s)	713, 1321, 1343, 1671
BclI	TGATCA	1 cut(s)	1489
BcoDI	GTCTC	4 cut(s)	819, 1308, 1574, 1953
BcuI	ACTAGT	1 cut(s)	1772
BfaI	CTAG	9 cut(s)	117, 159, 354, 534, 594, 791, 1749, 1773, 1941
BfmI	CTRYAG	1 cut(s)	1400
BglII	AGATCT	1 cut(s)	1357
BisI	GCNGC	6 cut(s)	1062, 1223, 1299, 1524, 1767, 1796
BlsI	GCNGC	6 cut(s)	1063, 1224, 1300, 1525, 1768, 1797
Bme1390I	CCNGG	4 cut(s)	713, 1321, 1343, 1671
Bme18I	GGWCC	1 cut(s)	1105
BmgBI	CACGTC	1 cut(s)	1366
BmgT120I	GGNCC	3 cut(s)	668, 709, 1105
BmiI	GGNNCC	6 cut(s)	135, 189, 646, 925, 1106, 1811
BmrFI	CCNGG	4 cut(s)	713, 1321, 1343, 1671
BmsI	GCATC	6 cut(s)	4, 145, 505, 725, 1541, 1822
BpiI	GAAGAC	1 cut(s)	1019
BpmI	CTGGAG	2 cut(s)	1062, 1692
Bpu10I	CCTNAGC	2 cut(s)	249, 1284
Bpu14I	TTCGAA	1 cut(s)	233
BpuEI	CTTGAG	3 cut(s)	509, 839, 2030
Bsa29I	ATCGAT	1 cut(s)	452
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaJI	CCNNGG	3 cut(s)	773, 1065, 1320
BsaWI	WCCGGW	1 cut(s)	136
BsaXI	ACNNNNNCTCC	2 cut(s)	296, 326
Bsc4I	CCNNNNNNNGG	6 cut(s)	677, 938, 1348, 1562, 1610, 1819
Bse1I	ACTGG	5 cut(s)	528, 614, 682, 1048, 1281
Bse8I	GATNNNNATC	1 cut(s)	1329
BseAI	TCCGGA	1 cut(s)	136
BseBI	CCWGG	4 cut(s)	713, 1321, 1343, 1671
BseCI	ATCGAT	1 cut(s)	452
BseDI	CCNNGG	3 cut(s)	773, 1065, 1320
BseJI	GATNNNNATC	1 cut(s)	1329
BseLI	CCNNNNNNNGG	6 cut(s)	677, 938, 1348, 1562, 1610, 1819
BseMII	CTCAG	6 cut(s)	231, 240, 678, 1298, 1651, 1964
BseNI	ACTGG	5 cut(s)	528, 614, 682, 1048, 1281
BseSI	GKGCMC	2 cut(s)	849, 1985
BseXI	GCAGC	5 cut(s)	1073, 1234, 1310, 1510, 1807
Bsh1236I	CGCG	3 cut(s)	1016, 1185, 1769
BshFI	GGCC	4 cut(s)	670, 711, 1213, 1931
BshVI	ATCGAT	1 cut(s)	452
BsiHKAI	GWGCWC	3 cut(s)	1381, 1692, 2008
BsiSI	CCGG	1 cut(s)	137
BslFI	GGGAC	3 cut(s)	1647, 1696, 1766
BslI	CCNNNNNNNGG	6 cut(s)	677, 938, 1348, 1562, 1610, 1819
BsmAI	GTCTC	4 cut(s)	819, 1308, 1574, 1953
BsmBI	CGTCTC	1 cut(s)	1308
BsmFI	GGGAC	3 cut(s)	1647, 1696, 1766
BsmI	GAATGC	2 cut(s)	241, 1768
BsnI	GGCC	4 cut(s)	670, 711, 1213, 1931
Bsp119I	TTCGAA	1 cut(s)	233
Bsp1286I	GDGCHC	5 cut(s)	849, 1381, 1692, 1985, 2008
Bsp13I	TCCGGA	1 cut(s)	136
Bsp1407I	TGTACA	2 cut(s)	1969, 2075
Bsp19I	CCATGG	2 cut(s)	773, 1065
BspANI	GGCC	4 cut(s)	670, 711, 1213, 1931
BspCNI	CTCAG	6 cut(s)	232, 241, 677, 1297, 1650, 1963
BspDI	ATCGAT	1 cut(s)	452
BspEI	TCCGGA	1 cut(s)	136
BspFNI	CGCG	3 cut(s)	1016, 1185, 1769
BspHI	TCATGA	1 cut(s)	1333
BspLI	GGNNCC	6 cut(s)	135, 189, 646, 925, 1106, 1811
BspPI	GGATC	5 cut(s)	866, 923, 1050, 1333, 1890
BspT104I	TTCGAA	1 cut(s)	233
BsrGI	TGTACA	2 cut(s)	1969, 2075
BsrI	ACTGG	5 cut(s)	528, 614, 682, 1048, 1281
BssECI	CCNNGG	3 cut(s)	773, 1065, 1320
BssSI	CACGAG	1 cut(s)	2031
BssT1I	CCWWGG	2 cut(s)	773, 1065
Bst2BI	CACGAG	1 cut(s)	2031
Bst2UI	CCWGG	4 cut(s)	713, 1321, 1343, 1671
Bst4CI	ACNGT	8 cut(s)	68, 813, 1553, 1657, 1687, 1819, 1879, 2080
Bst6I	CTCTTC	1 cut(s)	1311
BstAUI	TGTACA	2 cut(s)	1969, 2075
BstBI	TTCGAA	1 cut(s)	233
BstC8I	GCNNGC	3 cut(s)	750, 761, 2004
BstDSI	CCRYGG	2 cut(s)	773, 1065
BstENI	CCTNNNNNAGG	1 cut(s)	936
BstFNI	CGCG	3 cut(s)	1016, 1185, 1769
BstHHI	GCGC	4 cut(s)	87, 542, 1187, 1371
BstMAI	GTCTC	4 cut(s)	819, 1308, 1574, 1953
BstNI	CCWGG	4 cut(s)	713, 1321, 1343, 1671
BstSCI	CCNGG	4 cut(s)	711, 1319, 1341, 1669
BstSFI	CTRYAG	1 cut(s)	1400
BstSLI	GKGCMC	2 cut(s)	849, 1985
BstUI	CGCG	3 cut(s)	1016, 1185, 1769
BstV1I	GCAGC	5 cut(s)	1073, 1234, 1310, 1510, 1807
BstV2I	GAAGAC	1 cut(s)	1019
BstX2I	RGATCY	4 cut(s)	858, 1338, 1357, 1882
BstYI	RGATCY	4 cut(s)	858, 1338, 1357, 1882
Bsu15I	ATCGAT	1 cut(s)	452
BsuRI	GGCC	4 cut(s)	670, 711, 1213, 1931
BsuTUI	ATCGAT	1 cut(s)	452
BtgI	CCRYGG	2 cut(s)	773, 1065
BtgZI	GCGATG	1 cut(s)	1918
BtrI	CACGTC	1 cut(s)	1366
BtsIMutI	CAGTG	3 cut(s)	621, 1692, 1884
Cac8I	GCNNGC	3 cut(s)	750, 761, 2004
CaiI	CAGNNNCTG	1 cut(s)	1523
CciI	TCATGA	1 cut(s)	1333
CfoI	GCGC	4 cut(s)	87, 542, 1187, 1371
Cfr13I	GGNCC	3 cut(s)	668, 709, 1105
ClaI	ATCGAT	1 cut(s)	452
CseI	GACGC	1 cut(s)	1290
Csp6I	GTAC	7 cut(s)	121, 178, 1694, 1815, 1859, 1970, 2076
CviAII	CATG	9 cut(s)	184, 217, 697, 774, 1066, 1334, 1894, 1927, 1973
CviQI	GTAC	7 cut(s)	121, 178, 1694, 1815, 1859, 1970, 2076
DraI	TTTAAA	1 cut(s)	2019
EaeI	YGGCCR	1 cut(s)	1929
Eam1104I	CTCTTC	1 cut(s)	1311
EarI	CTCTTC	1 cut(s)	1311
EciI	GGCGGA	2 cut(s)	1822, 1916
Ecl136II	GAGCTC	1 cut(s)	1379
Eco130I	CCWWGG	2 cut(s)	773, 1065
Eco24I	GRGCYC	1 cut(s)	1381
Eco32I	GATATC	2 cut(s)	450, 628
Eco47I	GGWCC	1 cut(s)	1105
Eco53kI	GAGCTC	1 cut(s)	1379
Eco57I	CTGAAG	3 cut(s)	918, 1436, 1578
EcoICRI	GAGCTC	1 cut(s)	1379
EcoNI	CCTNNNNNAGG	1 cut(s)	936
EcoO109I	RGGNCCY	2 cut(s)	668, 1105
EcoRII	CCWGG	4 cut(s)	711, 1319, 1341, 1669
EcoRV	GATATC	2 cut(s)	450, 628
EcoT14I	CCWWGG	2 cut(s)	773, 1065
EcoT22I	ATGCAT	1 cut(s)	1138
EcoT38I	GRGCYC	1 cut(s)	1381
ErhI	CCWWGG	2 cut(s)	773, 1065
Esp3I	CGTCTC	1 cut(s)	1308
FaeI	CATG	9 cut(s)	187, 220, 700, 777, 1069, 1337, 1897, 1930, 1976
FalI	AAGNNNNNCTT	8 cut(s)	213, 245, 327, 359, 879, 911, 1434, 1466
FaqI	GGGAC	3 cut(s)	1647, 1696, 1766
FatI	CATG	9 cut(s)	183, 216, 696, 773, 1065, 1333, 1893, 1926, 1972
FauI	CCCGC	1 cut(s)	674
FbaI	TGATCA	1 cut(s)	1489
Fnu4HI	GCNGC	6 cut(s)	1062, 1223, 1299, 1524, 1767, 1796
FriOI	GRGCYC	1 cut(s)	1381
Fsp4HI	GCNGC	6 cut(s)	1062, 1223, 1299, 1524, 1767, 1796
FspBI	CTAG	9 cut(s)	117, 159, 354, 534, 594, 791, 1749, 1773, 1941
FspI	TGCGCA	1 cut(s)	1370
GlaI	GCGC	4 cut(s)	86, 541, 1186, 1370
GluI	GCNGC	6 cut(s)	1062, 1223, 1299, 1524, 1767, 1796
GsuI	CTGGAG	2 cut(s)	1062, 1692
HaeIII	GGCC	4 cut(s)	670, 711, 1213, 1931
HapII	CCGG	1 cut(s)	137
HgaI	GACGC	1 cut(s)	1290
HhaI	GCGC	4 cut(s)	87, 542, 1187, 1371
Hin1II	CATG	9 cut(s)	187, 220, 700, 777, 1069, 1337, 1897, 1930, 1976
Hin6I	GCGC	4 cut(s)	85, 540, 1185, 1369
HinP1I	GCGC	4 cut(s)	85, 540, 1185, 1369
HincII	GTYRAC	1 cut(s)	988
HindII	GTYRAC	1 cut(s)	988
HindIII	AAGCTT	2 cut(s)	767, 1908
HinfI	GANTC	6 cut(s)	491, 890, 1127, 1470, 1635, 1946
HpaI	GTTAAC	1 cut(s)	988
HpaII	CCGG	1 cut(s)	137
HphI	GGTGA	3 cut(s)	88, 1037, 1136
Hpy166II	GTNNAC	1 cut(s)	988
Hpy8I	GTNNAC	1 cut(s)	988
Hpy99I	CGWCG	1 cut(s)	178
HpyAV	CCTTC	7 cut(s)	19, 238, 293, 458, 932, 942, 1624
HpyCH4III	ACNGT	8 cut(s)	68, 813, 1553, 1657, 1687, 1819, 1879, 2080
HpyCH4IV	ACGT	4 cut(s)	176, 984, 1365, 1786
HpyCH4V	TGCA	7 cut(s)	290, 524, 967, 1061, 1136, 1526, 1532
HpySE526I	ACGT	4 cut(s)	176, 984, 1365, 1786
Hsp92II	CATG	9 cut(s)	187, 220, 700, 777, 1069, 1337, 1897, 1930, 1976
HspAI	GCGC	4 cut(s)	85, 540, 1185, 1369
Kpn2I	TCCGGA	1 cut(s)	136
Ksp22I	TGATCA	1 cut(s)	1489
KspAI	GTTAAC	1 cut(s)	988
LmnI	GCTCC	4 cut(s)	187, 434, 489, 1809
Lsp1109I	GCAGC	5 cut(s)	1073, 1234, 1310, 1510, 1807
LweI	GCATC	6 cut(s)	4, 145, 505, 725, 1541, 1822
MaeI	CTAG	9 cut(s)	117, 159, 354, 534, 594, 791, 1749, 1773, 1941
MaeII	ACGT	4 cut(s)	176, 984, 1365, 1786
MaeIII	GTNAC	3 cut(s)	76, 1000, 1124
MboII	GAAGA	8 cut(s)	1019, 1298, 1367, 1424, 1432, 1571, 1735, 1877
MfeI	CAATTG	3 cut(s)	1155, 1436, 1527
MflI	RGATCY	4 cut(s)	858, 1338, 1357, 1882
MhlI	GDGCHC	5 cut(s)	849, 1381, 1692, 1985, 2008
MlsI	TGGCCA	1 cut(s)	1931
MluNI	TGGCCA	1 cut(s)	1931
MlyI	GAGTC	5 cut(s)	500, 1121, 1464, 1629, 1955
MmeI	TCCRAC	1 cut(s)	132
Mox20I	TGGCCA	1 cut(s)	1931
Mph1103I	ATGCAT	1 cut(s)	1138
MroI	TCCGGA	1 cut(s)	136
MscI	TGGCCA	1 cut(s)	1931
MseI	TTAA	8 cut(s)	48, 987, 1022, 1164, 1208, 1256, 1710, 2018
MslI	CAYNNNNRTG	1 cut(s)	221
Msp20I	TGGCCA	1 cut(s)	1931
MspA1I	CMGCKG	2 cut(s)	1798, 1856
MspI	CCGG	1 cut(s)	137
MspR9I	CCNGG	4 cut(s)	713, 1321, 1343, 1671
MunI	CAATTG	3 cut(s)	1155, 1436, 1527
Mva1269I	GAATGC	2 cut(s)	241, 1768
MvaI	CCWGG	4 cut(s)	713, 1321, 1343, 1671
MvnI	CGCG	3 cut(s)	1016, 1185, 1769
NcoI	CCATGG	2 cut(s)	773, 1065
NlaIII	CATG	9 cut(s)	187, 220, 700, 777, 1069, 1337, 1897, 1930, 1976
NlaIV	GGNNCC	6 cut(s)	135, 189, 646, 925, 1106, 1811
NmeAIII	GCCGAG	1 cut(s)	216
NmuCI	GTSAC	3 cut(s)	76, 1000, 1124
NsbI	TGCGCA	1 cut(s)	1370
NsiI	ATGCAT	1 cut(s)	1138
NspV	TTCGAA	1 cut(s)	233
PagI	TCATGA	1 cut(s)	1333
PctI	GAATGC	2 cut(s)	241, 1768
PfeI	GAWTC	1 cut(s)	890
PfoI	TCCNGGA	1 cut(s)	1341
PkrI	GCNGC	6 cut(s)	1063, 1224, 1300, 1525, 1768, 1797
PleI	GAGTC	5 cut(s)	499, 1121, 1464, 1629, 1954
PpsI	GAGTC	5 cut(s)	499, 1121, 1464, 1629, 1954
PpuMI	RGGWCCY	1 cut(s)	1105
PshBI	ATTAAT	1 cut(s)	1256
Psp124BI	GAGCTC	1 cut(s)	1381
Psp5II	RGGWCCY	1 cut(s)	1105
Psp6I	CCWGG	4 cut(s)	711, 1319, 1341, 1669
PspGI	CCWGG	4 cut(s)	711, 1319, 1341, 1669
PspN4I	GGNNCC	6 cut(s)	135, 189, 646, 925, 1106, 1811
PspPI	GGNCC	3 cut(s)	668, 709, 1105
PspPPI	RGGWCCY	1 cut(s)	1105
PstNI	CAGNNNCTG	1 cut(s)	1523
PsuI	RGATCY	4 cut(s)	858, 1338, 1357, 1882
RsaI	GTAC	7 cut(s)	122, 179, 1695, 1816, 1860, 1971, 2077
RsaNI	GTAC	7 cut(s)	121, 178, 1694, 1815, 1859, 1970, 2076
RseI	CAYNNNNRTG	1 cut(s)	221
SacI	GAGCTC	1 cut(s)	1381
SaqAI	TTAA	8 cut(s)	48, 987, 1022, 1164, 1208, 1256, 1710, 2018
SatI	GCNGC	6 cut(s)	1062, 1223, 1299, 1524, 1767, 1796
Sau96I	GGNCC	3 cut(s)	668, 709, 1105
SchI	GAGTC	5 cut(s)	500, 1121, 1464, 1629, 1955
ScrFI	CCNGG	4 cut(s)	713, 1321, 1343, 1671
SduI	GDGCHC	5 cut(s)	849, 1381, 1692, 1985, 2008
SfaNI	GCATC	6 cut(s)	4, 145, 505, 725, 1541, 1822
SfcI	CTRYAG	1 cut(s)	1400
SfuI	TTCGAA	1 cut(s)	233
SinI	GGWCC	1 cut(s)	1105
SmiMI	CAYNNNNRTG	1 cut(s)	221
SmlI	CTYRAG	3 cut(s)	488, 818, 2009
SmoI	CTYRAG	3 cut(s)	488, 818, 2009
SpeI	ACTAGT	1 cut(s)	1772
SspI	AATATT	1 cut(s)	868
SspMI	CTAG	9 cut(s)	117, 159, 354, 534, 594, 791, 1749, 1773, 1941
SstI	GAGCTC	1 cut(s)	1381
StyD4I	CCNGG	4 cut(s)	711, 1319, 1341, 1669
StyI	CCWWGG	2 cut(s)	773, 1065
TaaI	ACNGT	8 cut(s)	68, 813, 1553, 1657, 1687, 1819, 1879, 2080
TaiI	ACGT	4 cut(s)	179, 987, 1368, 1789
TaqI	TCGA	6 cut(s)	112, 233, 452, 583, 728, 1606
TatI	WGTACW	2 cut(s)	1969, 2075
TauI	GCSGC	1 cut(s)	1769
TfiI	GAWTC	1 cut(s)	890
Tru1I	TTAA	8 cut(s)	48, 987, 1022, 1164, 1208, 1256, 1710, 2018
Tru9I	TTAA	8 cut(s)	48, 987, 1022, 1164, 1208, 1256, 1710, 2018
TscAI	CASTG	3 cut(s)	621, 1692, 1884
TseFI	GTSAC	3 cut(s)	76, 1000, 1124
TseI	GCWGC	5 cut(s)	1061, 1222, 1298, 1523, 1795
Tsp45I	GTSAC	3 cut(s)	76, 1000, 1124
TspDTI	ATGAA	8 cut(s)	172, 392, 713, 924, 1298, 1584, 2061, 2078
TspGWI	ACGGA	2 cut(s)	573, 871
TspRI	CASTG	3 cut(s)	621, 1692, 1884
VpaK11BI	GGWCC	1 cut(s)	1105
VspI	ATTAAT	1 cut(s)	1256
XagI	CCTNNNNNAGG	1 cut(s)	936
XapI	RAATTY	1 cut(s)	1498
XbaI	TCTAGA	1 cut(s)	533
XcmI	CCANNNNNNNNNTGG	2 cut(s)	703, 771
XspI	CTAG	9 cut(s)	117, 159, 354, 534, 594, 791, 1749, 1773, 1941
Zsp2I	ATGCAT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.