Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0005368

Physical Location & Seq

Genomic Coordinates Forward (+)

6057016 .. 6060650

Gene Structure 3635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031545

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGTCGTTTCATGTGACAGTACCGGCGCGAAGTCATATACCCGTCTTAACACTCATAGCCGCAAAGGCCTTGTTCCAGAAGCTGAAGGCCTTAGCTTCCAAAGCAGATTCTAATAGGTACTTGCCATTGCTTGAAGTACTTGAGGGTTGTGATTTTCTAGTGAAGCTGGAGAGAACTATAGGGTTGTGCATAGACTGCAATCTTTTGGAGATTCTCGACACGGCCAGTGAAGACTTGGAGATCATTAGGTTCGAAAAGAAGAGGAACATGGAGAAATTGGATGCTTTGTTGAAGGAAATGTCGTCTAAGATATTTAAGGCTGGCGGGATTGACAGTCCTTTGGTGACGAAGCGCAGGGCGAGGATGTGCGTGGGTGTTAGAGCTAGGTACAAGTATTTGGTTCCAGATGGCGTGGTGCTGGATGCTAGTAGTTCTGGTGCGACGTACTTCATGGAGCCGAGTGAGGCGGTGGAGTTGAATAACATGGAAGTGAGGCTTTTGAATGCTGAGAAGGCTGAGGAAATAGGCATTTTGAGCTTCCTTACATCGGAAATTGCAAAATCAGAAGGGGAGATAGTGTATTTGTTAGATAAGGTTGTAGAAGTTGATCTTGCTTTTGCTAGAGCTGCGTATGCTCAGTGGATGAATGGGGTATGCCCAATTTTCAGTTCCAAGAATGGCAAGGATTTAGATAATGGTATTGGGATGTCAGTAGATATCGAAGGAATACAACATCCTTTGCTCCTTGAGTCATCTCTTAGAAGTTTGTCTGATGCAAGGGCATCCAGTTCTAGAAGCGCACTTTCCTCCAAAGACGGAAATGATGTAAAAATGGTCTATCGAAGTATATCTGGTGGTGTATCTGATTTTCCAGTGCCAATAGATATCAAAATTGGATATGGAACCAGAGTGGTTGTAATCTCAGGGCCTAATACTGGTGGGAAAACGGCTTCCATGAAAACTTTGGGCCTGGCATCTCTTATGTCGAAAGCTGGAATGTATCTGCCTGCTAAAAGCCAGCCAAAGCTTCCATGGTTTGATCTTGTTCTAGCTGATATTGGAGATCAACAGTCTCTTGAGCAAAGCCTCTCAACATTTAGTGGACACATTTCACGGATCTGTAATATTTTGGAAGTCGCCTCAAAAGAATCACTTGTCCTCATTGATGAAATTGGTAGTGGAACCGATCCTTCAGAAGGTGTGGCTCTTTCTACCAGCATCTTGCAATATCTCAAAGATCGTGTTAACTTAGCTGTTGTGACTACTCATTACGCGGATTTAAGTCTTCTAAAAGAAAAGGATCACCAGTTTGAAAATGCAGCCATGGAGTTTTCTCCAGAAACCCTACAACCAACTTATCGGGTCCTATGGGGAAGTGTTGGTGACTCAAATGCATTGAGTATTGCTAAATCAATTGGTTTTAATCAACAAATAATTGAACGTGCACAGGATTGGGTGGAAAGATTAAGGCCAGAAAAGCAGCAGGAGCGTAAAGGTTTGCTATATCGGTCATTAATAGAGGAAAGAAACAGACTGGAAGCTCAGGCTAAGATGGCAGCGTCTCTTCATTCAGAAACCAGGGATATTTATCATGAGATCCAAGATGAGGCAGAAGATCTTGACGTGCGCAAGAGAGCTCTTATGGCAAAGGAAACCCTACAGGTTCGGGAAGAAGTGAAGATTGTCAAATCTCAATTAGAAGCTGTGCTTCAGGAGTTTGATAACCGACTCAAAACTGCCGGTGCCGATCAGTTGAATTTGCTGATTAAGAAATCAGAAGCTGCAGTTGCATCTATTATTGAGGCTCACAGTCCTGAAGATGGTTTCTTGGTTAATGAGACATCTGAAACTTCATACACACCTCGATTTGGGGAACAAGTCTATTTGAAGGGACTCAGAGATAAGATAGCTACTGTAGTTGAAGCACCTGGAGATGATGGGACAGTGCTCGTACAATATGGTAAAATTAAGGTTAGGTTGAAGAATAATGAGATCAGAGCTATTCCTAGTAGTGATAAAAATGCCGCGACTAGTTCTGTCCCACATTTGAAGCAGCGGGTTTGGCGGAGCCGTACTGCAGAAAACAAAGATGGGGAGGTTTCTTATAGTCCAGCGGTACAAACATCAAAGAACACAGTGGATCTTCGTGGCATGAGGGCCGAGGAAGCTTCTTACAATCTGGACATGGCTATCGCTGCTAGAGAGTCTCAGTCAGTTCTTTTTGTTGTACACGGGATGGGCACAGGGGTTGTCAAAGAGCGAGCACTTGAGATTTTAAAGAAACATCCACGAGTAGCCAAGTATGAAGCGGAAAGTCCAATGAATTATGGTTGTACAGTTGCTTACATCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030983 GO:0032300 GO:0032991 GO:0033554 GO:0034641 GO:0042623 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990391

KEGG Pathways

Metabolic & Signaling

ko03430 map03430

Pfam Domains

Protein Families

MutS_V Smr

Protein Analysis

785

Amino Acids

86.53

Weight (kDa)

6.0

Isoelectric Point (pI)

44.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MutS_V	PF00488	305 - 489	1.1e-34	MutS domain V
MSSS	PF20297	624 - 665	1.4e-07	MutS2 and Smr-associated SH3 domain
Smr	PF01713	713 - 782	1.6e-10	Smr domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005368)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65070 AT1G65070 AT1G65070 AT1G65070
fragaria_vesca	FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390 FvH4_3g09390
malus_domestica	MD00G1095300.v1.1
prunus_persica	Prupe.4G045200_v2.0.a1
pyrus_communis	pycom10g24790
rosa_chinensis	RchiOBHm_Chr5g0008191
rosa_laevigata	RLG00000031545
rosa_multiflora	Rmu_co8487121.1_g000001 Rmu_sc0001352.1_g000007 Rmu_sc0001352.1_g000008 Rmu_sc0001352.1_g000029 Rmu_sc0001626.1_g000010
rosa_roxburghii	Rroxscaffold_1G00068290
rosa_rugosa	Rorug04G0434000 Rorug04G0434100
rosa_samantha	Rh5AG062400 Rh5BG058700 Rh5CG069200 Rh5DG058100
rosa_wichuraiana	Rw5G005850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1628
AccB1I	GGYRCC	1 cut(s)	1742
AccII	CGCG	3 cut(s)	28, 1274, 2027
AciI	CCGC	9 cut(s)	60, 324, 467, 1274, 2025, 2056, 2065, 2114, 2309
AclWI	GGATC	5 cut(s)	1124, 1181, 1308, 1591, 2148
AcoI	YGGCCR	1 cut(s)	222
AcsI	RAATTY	1 cut(s)	1756
AcuI	CTGAAG	4 cut(s)	104, 1176, 1694, 1836
AfiI	CCNNNNNNNGG	6 cut(s)	547, 935, 1196, 1606, 1820, 1868
AhlI	ACTAGT	1 cut(s)	2030
AjiI	CACGTC	1 cut(s)	1624
AjnI	CCWGG	3 cut(s)	969, 1577, 1927
AjuI	GAANNNNNNNTTGG	2 cut(s)	652, 684
Alw21I	GWGCWC	4 cut(s)	1447, 1639, 1950, 2266
Alw26I	GTCTC	4 cut(s)	1077, 1566, 1832, 2211
Alw44I	GTGCAC	1 cut(s)	1443
AlwI	GGATC	5 cut(s)	1124, 1181, 1308, 1591, 2148
AlwNI	CAGNNNCTG	2 cut(s)	82, 1781
AoxI	GGCC	7 cut(s)	66, 87, 222, 926, 967, 1469, 2157
ApaLI	GTGCAC	1 cut(s)	1443
ApeKI	GCWGC	7 cut(s)	626, 1319, 1480, 1556, 1781, 2053, 2195
ApoI	RAATTY	1 cut(s)	1756
AseI	ATTAAT	1 cut(s)	1514
AspLEI	GCGC	4 cut(s)	28, 354, 800, 1629
AspS9I	GGNCC	4 cut(s)	926, 967, 1363, 2157
AsuHPI	GGTGA	3 cut(s)	355, 1295, 1394
AsuII	TTCGAA	1 cut(s)	252
AvaII	GGWCC	1 cut(s)	1363
BaeGI	GKGCMC	2 cut(s)	1447, 2243
BanI	GGYRCC	1 cut(s)	1742
BanII	GRGCYC	1 cut(s)	1639
BauI	CACGAG	1 cut(s)	2289
BbsI	GAAGAC	2 cut(s)	237, 1277
Bbv12I	GWGCWC	4 cut(s)	1447, 1639, 1950, 2266
BbvCI	CCTCAGC	1 cut(s)	516
BbvI	GCAGC	7 cut(s)	613, 1331, 1492, 1568, 1768, 2065, 2182
BccI	CCATC	6 cut(s)	401, 1546, 1814, 1931, 2084, 2230
BceAI	ACGGC	3 cut(s)	237, 963, 2055
BciT130I	CCWGG	3 cut(s)	971, 1579, 1929
BcoDI	GTCTC	4 cut(s)	1077, 1566, 1832, 2211
BcuI	ACTAGT	1 cut(s)	2030
BfaI	CTAG	9 cut(s)	158, 384, 426, 621, 792, 1049, 2007, 2031, 2199
BfmI	CTRYAG	5 cut(s)	177, 1658, 1782, 1914, 2076
BglI	GCCNNNNNGGC	1 cut(s)	65
BglII	AGATCT	1 cut(s)	1615
BisI	GCNGC	9 cut(s)	60, 627, 1320, 1481, 1557, 1782, 2025, 2054, 2196
BlsI	GCNGC	9 cut(s)	61, 628, 1321, 1482, 1558, 1783, 2026, 2055, 2197
BmcAI	AGTACT	1 cut(s)	138
Bme1390I	CCNGG	3 cut(s)	971, 1579, 1929
Bme18I	GGWCC	1 cut(s)	1363
BmgBI	CACGTC	1 cut(s)	1624
BmgT120I	GGNCC	4 cut(s)	926, 967, 1363, 2157
BmiI	GGNNCC	7 cut(s)	402, 456, 904, 1183, 1364, 1744, 2069
BmrFI	CCNGG	3 cut(s)	971, 1579, 1929
BmsI	GCATC	7 cut(s)	271, 412, 763, 791, 983, 1227, 1799
BpiI	GAAGAC	2 cut(s)	237, 1277
BpmI	CTGGAG	3 cut(s)	188, 1320, 1950
Bpu10I	CCTNAGC	3 cut(s)	91, 516, 1542
Bpu14I	TTCGAA	1 cut(s)	252
BpuEI	CTTGAG	4 cut(s)	161, 767, 1097, 2288
BsaBI	GATNNNNATC	1 cut(s)	1587
BsaJI	CCNNGG	4 cut(s)	1031, 1323, 1578, 2160
BsaXI	ACNNNNNCTCC	2 cut(s)	563, 593
Bsc4I	CCNNNNNNNGG	6 cut(s)	547, 935, 1196, 1606, 1820, 1868
Bse118I	RCCGGY	2 cut(s)	22, 1739
Bse1I	ACTGG	6 cut(s)	225, 786, 872, 940, 1306, 1539
Bse3DI	GCAATG	1 cut(s)	125
Bse8I	GATNNNNATC	1 cut(s)	1587
BseBI	CCWGG	3 cut(s)	971, 1579, 1929
BseDI	CCNNGG	4 cut(s)	1031, 1323, 1578, 2160
BseGI	GGATG	9 cut(s)	286, 369, 427, 648, 711, 733, 782, 2241, 2284
BseJI	GATNNNNATC	1 cut(s)	1587
BseLI	CCNNNNNNNGG	6 cut(s)	547, 935, 1196, 1606, 1820, 1868
BseMI	GCAATG	1 cut(s)	125
BseMII	CTCAG	7 cut(s)	498, 507, 650, 936, 1556, 1909, 2222
BseNI	ACTGG	6 cut(s)	225, 786, 872, 940, 1306, 1539
BseSI	GKGCMC	2 cut(s)	1447, 2243
BseXI	GCAGC	7 cut(s)	613, 1331, 1492, 1568, 1768, 2065, 2182
Bsh1236I	CGCG	3 cut(s)	28, 1274, 2027
BshFI	GGCC	7 cut(s)	68, 89, 224, 928, 969, 1471, 2159
BshNI	GGYRCC	1 cut(s)	1742
BsiHKAI	GWGCWC	4 cut(s)	1447, 1639, 1950, 2266
BsiSI	CCGG	2 cut(s)	23, 1740
BslFI	GGGAC	3 cut(s)	1905, 1954, 2024
BslI	CCNNNNNNNGG	6 cut(s)	547, 935, 1196, 1606, 1820, 1868
BsmAI	GTCTC	4 cut(s)	1077, 1566, 1832, 2211
BsmBI	CGTCTC	1 cut(s)	1566
BsmFI	GGGAC	3 cut(s)	1905, 1954, 2024
BsmI	GAATGC	1 cut(s)	508
BsnI	GGCC	7 cut(s)	68, 89, 224, 928, 969, 1471, 2159
Bsp119I	TTCGAA	1 cut(s)	252
Bsp1286I	GDGCHC	5 cut(s)	1447, 1639, 1950, 2243, 2266
Bsp1407I	TGTACA	2 cut(s)	2227, 2333
Bsp19I	CCATGG	2 cut(s)	1031, 1323
BspACI	CCGC	9 cut(s)	60, 324, 467, 1274, 2025, 2056, 2065, 2114, 2309
BspANI	GGCC	7 cut(s)	68, 89, 224, 928, 969, 1471, 2159
BspCNI	CTCAG	7 cut(s)	499, 508, 649, 935, 1555, 1908, 2221
BspFNI	CGCG	3 cut(s)	28, 1274, 2027
BspHI	TCATGA	1 cut(s)	1591
BspLI	GGNNCC	7 cut(s)	402, 456, 904, 1183, 1364, 1744, 2069
BspMAI	CTGCAG	2 cut(s)	1786, 2080
BspPI	GGATC	5 cut(s)	1124, 1181, 1308, 1591, 2148
BspT104I	TTCGAA	1 cut(s)	252
BspT107I	GGYRCC	1 cut(s)	1742
BsrDI	GCAATG	1 cut(s)	125
BsrFI	RCCGGY	2 cut(s)	22, 1739
BsrGI	TGTACA	2 cut(s)	2227, 2333
BsrI	ACTGG	6 cut(s)	225, 786, 872, 940, 1306, 1539
BssAI	RCCGGY	2 cut(s)	22, 1739
BssECI	CCNNGG	4 cut(s)	1031, 1323, 1578, 2160
BssSI	CACGAG	1 cut(s)	2289
BssT1I	CCWWGG	2 cut(s)	1031, 1323
Bst2BI	CACGAG	1 cut(s)	2289
Bst2UI	CCWGG	3 cut(s)	971, 1579, 1929
Bst4CI	ACNGT	8 cut(s)	19, 335, 1071, 1811, 1915, 1945, 2137, 2338
Bst6I	CTCTTC	2 cut(s)	254, 1569
BstAPI	GCANNNNNTGC	1 cut(s)	195
BstAUI	TGTACA	2 cut(s)	2227, 2333
BstBI	TTCGAA	1 cut(s)	252
BstC8I	GCNNGC	4 cut(s)	322, 1008, 1019, 2262
BstDSI	CCRYGG	2 cut(s)	1031, 1323
BstENI	CCTNNNNNAGG	1 cut(s)	1194
BstF5I	GGATG	9 cut(s)	286, 369, 427, 648, 711, 733, 782, 2241, 2284
BstFNI	CGCG	3 cut(s)	28, 1274, 2027
BstHHI	GCGC	4 cut(s)	28, 354, 800, 1629
BstMAI	GTCTC	4 cut(s)	1077, 1566, 1832, 2211
BstNI	CCWGG	3 cut(s)	971, 1579, 1929
BstSCI	CCNGG	3 cut(s)	969, 1577, 1927
BstSFI	CTRYAG	5 cut(s)	177, 1658, 1782, 1914, 2076
BstSLI	GKGCMC	2 cut(s)	1447, 2243
BstUI	CGCG	3 cut(s)	28, 1274, 2027
BstV1I	GCAGC	7 cut(s)	613, 1331, 1492, 1568, 1768, 2065, 2182
BstV2I	GAAGAC	2 cut(s)	237, 1277
BstX2I	RGATCY	4 cut(s)	1116, 1596, 1615, 2140
BstYI	RGATCY	4 cut(s)	1116, 1596, 1615, 2140
BsuRI	GGCC	7 cut(s)	68, 89, 224, 928, 969, 1471, 2159
BtgI	CCRYGG	2 cut(s)	1031, 1323
BtrI	CACGTC	1 cut(s)	1624
BtsCI	GGATG	9 cut(s)	286, 369, 427, 648, 711, 733, 782, 2241, 2284
BtsIMutI	CAGTG	5 cut(s)	232, 644, 879, 1950, 2142
Cac8I	GCNNGC	4 cut(s)	322, 1008, 1019, 2262
CaiI	CAGNNNCTG	2 cut(s)	82, 1781
CciI	TCATGA	1 cut(s)	1591
CfoI	GCGC	4 cut(s)	28, 354, 800, 1629
Cfr10I	RCCGGY	2 cut(s)	22, 1739
Cfr13I	GGNCC	4 cut(s)	926, 967, 1363, 2157
CseI	GACGC	1 cut(s)	1548
DraI	TTTAAA	1 cut(s)	2277
EaeI	YGGCCR	1 cut(s)	222
Eam1104I	CTCTTC	2 cut(s)	254, 1569
EarI	CTCTTC	2 cut(s)	254, 1569
EciI	GGCGGA	1 cut(s)	2080
Ecl136II	GAGCTC	1 cut(s)	1637
Eco130I	CCWWGG	2 cut(s)	1031, 1323
Eco147I	AGGCCT	2 cut(s)	68, 89
Eco24I	GRGCYC	1 cut(s)	1639
Eco32I	GATATC	2 cut(s)	718, 886
Eco47I	GGWCC	1 cut(s)	1363
Eco53kI	GAGCTC	1 cut(s)	1637
Eco57I	CTGAAG	4 cut(s)	104, 1176, 1694, 1836
EcoICRI	GAGCTC	1 cut(s)	1637
EcoNI	CCTNNNNNAGG	1 cut(s)	1194
EcoO109I	RGGNCCY	2 cut(s)	926, 1363
EcoRII	CCWGG	3 cut(s)	969, 1577, 1927
EcoRV	GATATC	2 cut(s)	718, 886
EcoT14I	CCWWGG	2 cut(s)	1031, 1323
EcoT22I	ATGCAT	1 cut(s)	1396
EcoT38I	GRGCYC	1 cut(s)	1639
ErhI	CCWWGG	2 cut(s)	1031, 1323
Esp3I	CGTCTC	1 cut(s)	1566
FalI	AAGNNNNNCTT	8 cut(s)	480, 512, 594, 626, 1137, 1169, 1692, 1724
FaqI	GGGAC	3 cut(s)	1905, 1954, 2024
FauI	CCCGC	2 cut(s)	317, 2049
Fnu4HI	GCNGC	9 cut(s)	60, 627, 1320, 1481, 1557, 1782, 2025, 2054, 2196
FokI	GGATG	9 cut(s)	293, 376, 434, 655, 718, 720, 769, 2248, 2271
FriOI	GRGCYC	1 cut(s)	1639
Fsp4HI	GCNGC	9 cut(s)	60, 627, 1320, 1481, 1557, 1782, 2025, 2054, 2196
FspBI	CTAG	9 cut(s)	158, 384, 426, 621, 792, 1049, 2007, 2031, 2199
FspI	TGCGCA	1 cut(s)	1628
GlaI	GCGC	4 cut(s)	27, 353, 799, 1628
GluI	GCNGC	9 cut(s)	60, 627, 1320, 1481, 1557, 1782, 2025, 2054, 2196
GsuI	CTGGAG	3 cut(s)	188, 1320, 1950
HaeIII	GGCC	7 cut(s)	68, 89, 224, 928, 969, 1471, 2159
HapII	CCGG	2 cut(s)	23, 1740
HgaI	GACGC	1 cut(s)	1548
HhaI	GCGC	4 cut(s)	28, 354, 800, 1629
Hin6I	GCGC	4 cut(s)	26, 352, 798, 1627
HinP1I	GCGC	4 cut(s)	26, 352, 798, 1627
HincII	GTYRAC	1 cut(s)	1246
HindII	GTYRAC	1 cut(s)	1246
HindIII	AAGCTT	2 cut(s)	1025, 2166
HinfI	GANTC	8 cut(s)	107, 211, 749, 1148, 1385, 1728, 1893, 2204
HpaI	GTTAAC	1 cut(s)	1246
HpaII	CCGG	2 cut(s)	23, 1740
HphI	GGTGA	3 cut(s)	355, 1295, 1394
Hpy166II	GTNNAC	4 cut(s)	1103, 1246, 1445, 2230
Hpy8I	GTNNAC	4 cut(s)	1103, 1246, 1445, 2230
Hpy99I	CGWCG	1 cut(s)	445
HpyAV	CCTTC	8 cut(s)	79, 286, 505, 560, 716, 1190, 1200, 1882
HpyCH4III	ACNGT	8 cut(s)	19, 335, 1071, 1811, 1915, 1945, 2137, 2338
HpyCH4IV	ACGT	3 cut(s)	443, 1441, 1623
HpySE526I	ACGT	3 cut(s)	443, 1441, 1623
HspAI	GCGC	4 cut(s)	26, 352, 798, 1627
KspAI	GTTAAC	1 cut(s)	1246
LmnI	GCTCC	4 cut(s)	454, 747, 1486, 2067
Lsp1109I	GCAGC	7 cut(s)	613, 1331, 1492, 1568, 1768, 2065, 2182
LweI	GCATC	7 cut(s)	271, 412, 763, 791, 983, 1227, 1799
MaeI	CTAG	9 cut(s)	158, 384, 426, 621, 792, 1049, 2007, 2031, 2199
MaeII	ACGT	3 cut(s)	443, 1441, 1623
MaeIII	GTNAC	4 cut(s)	13, 343, 1258, 1382
MfeI	CAATTG	1 cut(s)	1413
MflI	RGATCY	4 cut(s)	1116, 1596, 1615, 2140
MhlI	GDGCHC	5 cut(s)	1447, 1639, 1950, 2243, 2266
MlyI	GAGTC	5 cut(s)	758, 1379, 1722, 1887, 2213
Mph1103I	ATGCAT	1 cut(s)	1396
MslI	CAYNNNNRTG	1 cut(s)	488
MspA1I	CMGCKG	2 cut(s)	2056, 2114
MspI	CCGG	2 cut(s)	23, 1740
MspR9I	CCNGG	3 cut(s)	971, 1579, 1929
MunI	CAATTG	1 cut(s)	1413
Mva1269I	GAATGC	1 cut(s)	508
MvaI	CCWGG	3 cut(s)	971, 1579, 1929
MvnI	CGCG	3 cut(s)	28, 1274, 2027
NcoI	CCATGG	2 cut(s)	1031, 1323
NlaIV	GGNNCC	7 cut(s)	402, 456, 904, 1183, 1364, 1744, 2069
NmeAIII	GCCGAG	2 cut(s)	483, 2185
NmuCI	GTSAC	4 cut(s)	13, 343, 1258, 1382
NsbI	TGCGCA	1 cut(s)	1628
NsiI	ATGCAT	1 cut(s)	1396
NspV	TTCGAA	1 cut(s)	252
PagI	TCATGA	1 cut(s)	1591
PceI	AGGCCT	2 cut(s)	68, 89
PctI	GAATGC	1 cut(s)	508
PfeI	GAWTC	3 cut(s)	107, 211, 1148
PkrI	GCNGC	9 cut(s)	61, 628, 1321, 1482, 1558, 1783, 2026, 2055, 2197
PleI	GAGTC	5 cut(s)	757, 1379, 1722, 1887, 2212
PpsI	GAGTC	5 cut(s)	757, 1379, 1722, 1887, 2212
PpuMI	RGGWCCY	1 cut(s)	1363
PshBI	ATTAAT	1 cut(s)	1514
Psp124BI	GAGCTC	1 cut(s)	1639
Psp5II	RGGWCCY	1 cut(s)	1363
Psp6I	CCWGG	3 cut(s)	969, 1577, 1927
PspGI	CCWGG	3 cut(s)	969, 1577, 1927
PspN4I	GGNNCC	7 cut(s)	402, 456, 904, 1183, 1364, 1744, 2069
PspPI	GGNCC	4 cut(s)	926, 967, 1363, 2157
PspPPI	RGGWCCY	1 cut(s)	1363
PstI	CTGCAG	2 cut(s)	1786, 2080
PstNI	CAGNNNCTG	2 cut(s)	82, 1781
PsuI	RGATCY	4 cut(s)	1116, 1596, 1615, 2140
RseI	CAYNNNNRTG	1 cut(s)	488
SacI	GAGCTC	1 cut(s)	1639
SatI	GCNGC	9 cut(s)	60, 627, 1320, 1481, 1557, 1782, 2025, 2054, 2196
Sau96I	GGNCC	4 cut(s)	926, 967, 1363, 2157
ScaI	AGTACT	1 cut(s)	138
SchI	GAGTC	5 cut(s)	758, 1379, 1722, 1887, 2213
ScrFI	CCNGG	3 cut(s)	971, 1579, 1929
SduI	GDGCHC	5 cut(s)	1447, 1639, 1950, 2243, 2266
SfaNI	GCATC	7 cut(s)	271, 412, 763, 791, 983, 1227, 1799
SfcI	CTRYAG	5 cut(s)	177, 1658, 1782, 1914, 2076
SfuI	TTCGAA	1 cut(s)	252
SinI	GGWCC	1 cut(s)	1363
SmiMI	CAYNNNNRTG	1 cut(s)	488
SmlI	CTYRAG	4 cut(s)	140, 746, 1076, 2267
SmoI	CTYRAG	4 cut(s)	140, 746, 1076, 2267
SpeI	ACTAGT	1 cut(s)	2030
SseBI	AGGCCT	2 cut(s)	68, 89
SsiI	CCGC	9 cut(s)	60, 324, 467, 1274, 2025, 2056, 2065, 2114, 2309
SspI	AATATT	1 cut(s)	1126
SspMI	CTAG	9 cut(s)	158, 384, 426, 621, 792, 1049, 2007, 2031, 2199
SstI	GAGCTC	1 cut(s)	1639
StuI	AGGCCT	2 cut(s)	68, 89
StyD4I	CCNGG	3 cut(s)	969, 1577, 1927
StyI	CCWWGG	2 cut(s)	1031, 1323
TaaI	ACNGT	8 cut(s)	19, 335, 1071, 1811, 1915, 1945, 2137, 2338
TaiI	ACGT	3 cut(s)	446, 1444, 1626
TaqI	TCGA	6 cut(s)	216, 252, 720, 841, 986, 1864
TaqII	GACCGA	1 cut(s)	1497
TatI	WGTACW	3 cut(s)	136, 2227, 2333
TauI	GCSGC	2 cut(s)	62, 2027
TfiI	GAWTC	3 cut(s)	107, 211, 1148
TscAI	CASTG	5 cut(s)	232, 644, 879, 1950, 2142
TseFI	GTSAC	4 cut(s)	13, 343, 1258, 1382
TseI	GCWGC	7 cut(s)	626, 1319, 1480, 1556, 1781, 2053, 2195
Tsp45I	GTSAC	4 cut(s)	13, 343, 1258, 1382
TspDTI	ATGAA	8 cut(s)	439, 659, 971, 1182, 1556, 1842, 2319, 2336
TspGWI	ACGGA	2 cut(s)	831, 1129
TspRI	CASTG	5 cut(s)	232, 644, 879, 1950, 2142
VneI	GTGCAC	1 cut(s)	1443
VpaK11BI	GGWCC	1 cut(s)	1363
VspI	ATTAAT	1 cut(s)	1514
XagI	CCTNNNNNAGG	1 cut(s)	1194
XapI	RAATTY	1 cut(s)	1756
XbaI	TCTAGA	1 cut(s)	791
XcmI	CCANNNNNNNNNTGG	3 cut(s)	232, 961, 1029
XspI	CTAG	9 cut(s)	158, 384, 426, 621, 792, 1049, 2007, 2031, 2199
ZrmI	AGTACT	1 cut(s)	138
Zsp2I	ATGCAT	1 cut(s)	1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.