FvH4_3g28510

NADH kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000832
Physical Location & Seq
Forward (+)
21503871 .. 21516352
12482 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g28510.t1

Sequence Viewer

Length: 1560 bp
ATGGCTCCAAGCAAGTCAAATTCTAAGGGTGATGCAAGTGTTTCATGCCCACAAGAGAATGGTGGTCTCAATTCACTTTCCCTCTTAAGTTCAGAGAAGGCGGTCCAGGAACTTCTAGAGCAATCCACTCTTCAGGAAACAGATGACCACCTCATAGAGTTCTCAGAGGCTATGAGAACGGTTGCAAAGGCCCTTAGACGAGCTGCCGAAGGAAAGGCTTCTGCACATGCTGAAGCAGCTGAATGGAAGCGCAAATATGAACTGGAGAGGGCGCGCAATCTGCATCTAGAACATAAAGGGCCATCACATAGAGAGAGTAACAGGGATGATGAGAGGATAGAGAACTTGGCCAGGAGATCAAATGATCAATCTGAACAATGTTGTGGGAGTAATGGGATATGCTCTCATGAAGTTCTTCGGGATGGTGAATGTGATTCTGATTCAAAATTGCTTCTCCATAAGTTTGCAAGAAAGGCATCATTCAAACTTTCATGGTGCTGCAAAGGTGACCAGAGTGACCAGCACAAGCATGACATTGTCTCTTTCGAAAGAGGAAACATAACAACTGCAGAGCGCAGTAGTAAACAGATTTCTTTGAAGTGGGAAACTCACCCACAGACTGTGCTTATATTGACAAAACCAAATTCAAATTCTGTTCGAATTCTATGTGCCGAAATGGTCAGATGGTTGAGAGAGCAGAAAGGGTTAGATATTTATGTGGAGCCACGTGTGAGAGGTGAACTTGTAACAGAATCATCATACTACAACTTTGTCCATACATGGAAAGAAGACACCGAGATTATGCTTCTGCACACAAGAGTTGACCTTGTGGTGACTCTTGGTGGGGATGGAACCGTCCTTTGGGCAGCATCCATGTTCAAAGGACCAGTTCCACCTGTTGTGCCGTTTTCTTTAGGGTCTCTGGGATTTATGACTCCATTTCACAGTGAACGTTACCGGGATTATCTCGATTCACTTTTAAAAGGTCCCATTAGTATCACACTACGACACCGGTTGCAGTGCCATGTTATTAGAGAAGCAGCTAAAAATGAGTACGAAACTGAAGGGCCAATACTTGTTTTAAATGAGGTTACAATTGACCGTGGAATATCATCTTATCTCACAAATTTGGAATGCTATTGTGACAACTCTTTTGTCACGTGCGTCCAAGGTGATGGGCTGATATTATCAACAACATCTGGCAGTACTGCATATTCATTAGCAGCTGGAGGATCAATGGTCCATCCCCAGGTTCCAGGCATCCTCTTTACCCCTATTTGTCCACATTCCTTATCATTCCGACCTCTGATATTACCTGAGTATGTGACGTTGCGAGTACAAGTACCTTATAACAGCAGAAGCCATGCATGGGCATCATTTGATGGCAAGGACAGGAAACGGCTTGCAGCTGGCGATGCACTTGTGTGCAGTATGGCTCCTTGGCCCGTCCCAACGGCATGTCAAGTTGATTCGACCAATGATTTCTTGACCAGCATTCATGATGGCCTGCACTGGAATCTGAGAAAGACTCAGTCTTTTGATGGCCCTAGGGATATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00760 ko01100 map00760 map01100
Pfam Domains
Protein Families
NAD_kinase

Protein Analysis

520

Amino Acids

58.03

Weight (kDa)

6.3

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_kinase PF01513 208 - 329 5.4e-19 ATP-NAD kinase N-terminal domain
NAD_kinase_C PF20143 361 - 479 2.5e-30 ATP-NAD kinase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21070 AT3G21070 AT3G21070 AT3G21070
fragaria_vesca FvH4_3g28510
malus_domestica MD03G1172500.v1.1 MD11G1190400.v1.1
prunus_persica Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1
pyrus_communis pycom03g12970 pycom11g16670
rosa_chinensis RchiOBHm_Chr5g0052801
rosa_laevigata RLG00000034795
rosa_multiflora Rmu_sc0004335.1_g000006 Rmu_sc0032421.1_g000001 Rmu_ssc0000311.1_g000025
rosa_roxburghii Rroxscaffold_1G00028620 Rroxscaffold_4G00318540
rosa_rugosa Rorug05G0269700 Rorug05G0269800
rosa_samantha Rh5AG341600 Rh5BG352300 Rh5CG379000 Rh5DG368700
rosa_wichuraiana Rw5G032210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1350
AccII CGCG 1 cut(s) 274
AciI CCGC 1 cut(s) 101
AclI AACGTT 1 cut(s) 952
AclWI GGATC 1 cut(s) 1240
AcoI YGGCCR 1 cut(s) 348
AcsI RAATTY 5 cut(s) 19, 643, 649, 660, 1126
AcuI CTGAAG 3 cut(s) 116, 252, 1083
AcvI CACGTG 2 cut(s) 728, 1161
AfaI GTAC 4 cut(s) 1055, 1207, 1338, 1344
AfiI CCNNNNNNNGG 3 cut(s) 861, 1249, 1369
AflII CTTAAG 1 cut(s) 85
AflIII ACRYGT 1 cut(s) 727
AgeI ACCGGT 1 cut(s) 1011
AgsI TTSAA 5 cut(s) 444, 484, 598, 648, 880
AjnI CCWGG 4 cut(s) 105, 350, 1248, 1255
AjuI GAANNNNNNNTTGG 4 cut(s) 634, 666, 844, 876
AleI CACNNNNGTG 1 cut(s) 1423
AluBI AGCT 5 cut(s) 203, 239, 1043, 1226, 1409
AluI AGCT 5 cut(s) 203, 239, 1043, 1226, 1409
Alw26I GTCTC 3 cut(s) 71, 544, 924
AlwI GGATC 1 cut(s) 1240
AoxI GGCC 7 cut(s) 189, 299, 348, 1067, 1442, 1504, 1543
ApeKI GCWGC 7 cut(s) 203, 236, 498, 866, 1040, 1223, 1406
ApoI RAATTY 5 cut(s) 19, 643, 649, 660, 1126
ArsI GACNNNNNNTTYG 2 cut(s) 1136, 1168
AsiGI ACCGGT 1 cut(s) 1011
Asp700I GAANNNNTTC 2 cut(s) 217, 414
AspA2I CCTAGG 1 cut(s) 1547
AspLEI GCGC 4 cut(s) 252, 274, 276, 576
AspS9I GGNCC 9 cut(s) 103, 190, 299, 884, 986, 1067, 1240, 1443, 1544
AsuC2I CCSGG 1 cut(s) 959
AsuHPI GGTGA 7 cut(s) 41, 437, 518, 602, 749, 844, 1184
AsuII TTCGAA 2 cut(s) 546, 658
AvaII GGWCC 4 cut(s) 103, 884, 986, 1240
AvrII CCTAGG 1 cut(s) 1547
BalI TGGCCA 1 cut(s) 350
BarI GAAGNNNNNNTAC 2 cut(s) 1056, 1088
BbrPI CACGTG 2 cut(s) 728, 1161
BbsI GAAGAC 1 cut(s) 795
BbvI GCAGC 7 cut(s) 190, 248, 485, 878, 1052, 1235, 1418
BccI CCATC 9 cut(s) 310, 416, 678, 842, 1169, 1251, 1376, 1496, 1535
BceAI ACGGC 3 cut(s) 889, 1415, 1470
BciT130I CCWGG 4 cut(s) 107, 352, 1250, 1257
BclI TGATCA 1 cut(s) 364
BcnI CCSGG 1 cut(s) 959
BcoDI GTCTC 3 cut(s) 71, 544, 924
BfaI CTAG 3 cut(s) 116, 287, 1548
BfmI CTRYAG 1 cut(s) 567
BfrI CTTAAG 1 cut(s) 85
BisI GCNGC 7 cut(s) 204, 237, 499, 867, 1041, 1224, 1407
BlnI CCTAGG 1 cut(s) 1547
BlsI GCNGC 7 cut(s) 205, 238, 500, 868, 1042, 1225, 1408
BmcAI AGTACT 1 cut(s) 1207
Bme1390I CCNGG 5 cut(s) 107, 352, 959, 1250, 1257
Bme18I GGWCC 4 cut(s) 103, 884, 986, 1240
BmgT120I GGNCC 9 cut(s) 103, 190, 299, 884, 986, 1067, 1240, 1443, 1544
BmiI GGNNCC 6 cut(s) 6, 723, 853, 988, 1254, 1437
BmrFI CCNGG 5 cut(s) 107, 352, 959, 1250, 1257
BmsI GCATC 7 cut(s) 22, 292, 485, 878, 1269, 1382, 1405
BpiI GAAGAC 1 cut(s) 795
BplI GAGNNNNNCTC 2 cut(s) 1513, 1545
BpmI CTGGAG 2 cut(s) 284, 1248
Bpu14I TTCGAA 2 cut(s) 546, 658
BpuMI CCSGG 1 cut(s) 959
BsaAI YACGTR 2 cut(s) 728, 1161
BsaI GGTCTC 2 cut(s) 71, 924
BsaJI CCNNGG 5 cut(s) 1102, 1168, 1248, 1439, 1547
BsaWI WCCGGW 1 cut(s) 1011
Bsc4I CCNNNNNNNGG 3 cut(s) 861, 1249, 1369
Bse118I RCCGGY 1 cut(s) 1011
Bse1I ACTGG 3 cut(s) 267, 887, 1517
BseBI CCWGG 4 cut(s) 107, 352, 1250, 1257
BseDI CCNNGG 5 cut(s) 1102, 1168, 1248, 1439, 1547
BseGI GGATG 6 cut(s) 331, 427, 853, 869, 1243, 1260
BseLI CCNNNNNNNGG 3 cut(s) 861, 1249, 1369
BseMII CTCAG 4 cut(s) 177, 1308, 1511, 1544
BseNI ACTGG 3 cut(s) 267, 887, 1517
BsePI GCGCGC 1 cut(s) 272
BseXI GCAGC 7 cut(s) 190, 248, 485, 878, 1052, 1235, 1418
BsgI GTGCAG 4 cut(s) 207, 794, 1447, 1493
Bsh1236I CGCG 1 cut(s) 274
BshFI GGCC 7 cut(s) 191, 301, 350, 1069, 1444, 1506, 1545
BshTI ACCGGT 1 cut(s) 1011
BsiSI CCGG 2 cut(s) 958, 1012
BslFI GGGAC 2 cut(s) 972, 1433
BslI CCNNNNNNNGG 3 cut(s) 861, 1249, 1369
BsmAI GTCTC 3 cut(s) 71, 544, 924
BsmFI GGGAC 2 cut(s) 972, 1433
BsmI GAATGC 2 cut(s) 1139, 1494
BsnI GGCC 7 cut(s) 191, 301, 350, 1069, 1444, 1506, 1545
Bso31I GGTCTC 2 cut(s) 71, 924
Bsp119I TTCGAA 2 cut(s) 546, 658
Bsp143I GATC 3 cut(s) 356, 364, 1232
BspACI CCGC 1 cut(s) 101
BspANI GGCC 7 cut(s) 191, 301, 350, 1069, 1444, 1506, 1545
BspCNI CTCAG 4 cut(s) 176, 1309, 1512, 1543
BspFNI CGCG 1 cut(s) 274
BspHI TCATGA 2 cut(s) 406, 1498
BspLI GGNNCC 6 cut(s) 6, 723, 853, 988, 1254, 1437
BspMAI CTGCAG 1 cut(s) 571
BspPI GGATC 1 cut(s) 1240
BspT104I TTCGAA 2 cut(s) 546, 658
BspTI CTTAAG 1 cut(s) 85
BspTNI GGTCTC 2 cut(s) 71, 924
BsrFI RCCGGY 1 cut(s) 1011
BsrI ACTGG 3 cut(s) 267, 887, 1517
BssAI RCCGGY 1 cut(s) 1011
BssECI CCNNGG 5 cut(s) 1102, 1168, 1248, 1439, 1547
BssHII GCGCGC 1 cut(s) 272
BssMI GATC 3 cut(s) 356, 364, 1232
BssT1I CCWWGG 3 cut(s) 1168, 1439, 1547
Bst2UI CCWGG 4 cut(s) 107, 352, 1250, 1257
Bst4CI ACNGT 5 cut(s) 181, 622, 856, 947, 1103
Bst6I CTCTTC 1 cut(s) 135
BstAFI CTTAAG 1 cut(s) 85
BstBAI YACGTR 2 cut(s) 728, 1161
BstBI TTCGAA 2 cut(s) 546, 658
BstC8I GCNNGC 4 cut(s) 274, 1404, 1411, 1508
BstDEI CTNAG 6 cut(s) 24, 163, 194, 1317, 1520, 1530
BstDSI CCRYGG 1 cut(s) 1102
BstEII GGTNACC 1 cut(s) 506
BstF5I GGATG 6 cut(s) 331, 427, 853, 869, 1243, 1260
BstFNI CGCG 1 cut(s) 274
BstHHI GCGC 4 cut(s) 252, 274, 276, 576
BstKTI GATC 3 cut(s) 359, 367, 1235
BstMAI GTCTC 3 cut(s) 71, 544, 924
BstMBI GATC 3 cut(s) 356, 364, 1232
BstMWI GCNNNNNNNGC 4 cut(s) 236, 280, 473, 1415
BstNI CCWGG 4 cut(s) 107, 352, 1250, 1257
BstNSI RCATGY 2 cut(s) 230, 1461
BstPI GGTNACC 1 cut(s) 506
BstSCI CCNGG 5 cut(s) 105, 350, 957, 1248, 1255
BstSFI CTRYAG 1 cut(s) 567
BstUI CGCG 1 cut(s) 274
BstV1I GCAGC 7 cut(s) 190, 248, 485, 878, 1052, 1235, 1418
BstV2I GAAGAC 1 cut(s) 795
BstXI CCANNNNNNTGG 1 cut(s) 1175
BsuRI GGCC 7 cut(s) 191, 301, 350, 1069, 1444, 1506, 1545
BtgI CCRYGG 1 cut(s) 1102
BtgZI GCGATG 1 cut(s) 1428
BtsCI GGATG 6 cut(s) 331, 427, 853, 869, 1243, 1260
BtsI GCAGTG 1 cut(s) 1025
BtsIMutI CAGTG 3 cut(s) 952, 1025, 1510
Cac8I GCNNGC 4 cut(s) 274, 1404, 1411, 1508
CciI TCATGA 2 cut(s) 406, 1498
CfoI GCGC 4 cut(s) 252, 274, 276, 576
Cfr10I RCCGGY 1 cut(s) 1011
Cfr13I GGNCC 9 cut(s) 103, 190, 299, 884, 986, 1067, 1240, 1443, 1544
CseI GACGC 1 cut(s) 1153
Csp6I GTAC 4 cut(s) 1054, 1206, 1337, 1343
CspAI ACCGGT 1 cut(s) 1011
CviQI GTAC 4 cut(s) 1054, 1206, 1337, 1343
DdeI CTNAG 6 cut(s) 24, 163, 194, 1317, 1520, 1530
DpnI GATC 3 cut(s) 358, 366, 1234
DpnII GATC 3 cut(s) 356, 364, 1232
DraI TTTAAA 2 cut(s) 981, 1083
EaeI YGGCCR 1 cut(s) 348
Eam1104I CTCTTC 1 cut(s) 135
EarI CTCTTC 1 cut(s) 135
Eco130I CCWWGG 3 cut(s) 1168, 1439, 1547
Eco31I GGTCTC 2 cut(s) 71, 924
Eco47I GGWCC 4 cut(s) 103, 884, 986, 1240
Eco57I CTGAAG 3 cut(s) 116, 252, 1083
Eco72I CACGTG 2 cut(s) 728, 1161
Eco91I GGTNACC 1 cut(s) 506
EcoO109I RGGNCCY 2 cut(s) 190, 986
EcoO65I GGTNACC 1 cut(s) 506
EcoRI GAATTC 1 cut(s) 660
EcoRII CCWGG 4 cut(s) 105, 350, 1248, 1255
EcoT14I CCWWGG 3 cut(s) 1168, 1439, 1547
EcoT22I ATGCAT 1 cut(s) 1369
ErhI CCWWGG 3 cut(s) 1168, 1439, 1547
FaqI GGGAC 2 cut(s) 972, 1433
FbaI TGATCA 1 cut(s) 364
Fnu4HI GCNGC 7 cut(s) 204, 237, 499, 867, 1041, 1224, 1407
FokI GGATG 6 cut(s) 338, 434, 856, 860, 1230, 1247
Fsp4HI GCNGC 7 cut(s) 204, 237, 499, 867, 1041, 1224, 1407
FspBI CTAG 3 cut(s) 116, 287, 1548
GlaI GCGC 4 cut(s) 251, 273, 275, 575
GluI GCNGC 7 cut(s) 204, 237, 499, 867, 1041, 1224, 1407
GsuI CTGGAG 2 cut(s) 284, 1248
HaeIII GGCC 7 cut(s) 191, 301, 350, 1069, 1444, 1506, 1545
HapII CCGG 2 cut(s) 958, 1012
HgaI GACGC 1 cut(s) 1153
HhaI GCGC 4 cut(s) 252, 274, 276, 576
Hin6I GCGC 4 cut(s) 250, 272, 274, 574
HinP1I GCGC 4 cut(s) 250, 272, 274, 574
HincII GTYRAC 1 cut(s) 823
HindII GTYRAC 1 cut(s) 823
HinfI GANTC 9 cut(s) 434, 440, 752, 835, 934, 971, 1469, 1516, 1528
HpaII CCGG 2 cut(s) 958, 1012
HphI GGTGA 7 cut(s) 41, 437, 518, 602, 749, 844, 1184
Hpy166II GTNNAC 5 cut(s) 584, 740, 823, 950, 1283
Hpy188I TCNGA 8 cut(s) 94, 166, 373, 439, 683, 1301, 1308, 1521
Hpy188III TCNNGA 8 cut(s) 116, 134, 287, 407, 419, 968, 1486, 1499
Hpy8I GTNNAC 5 cut(s) 584, 740, 823, 950, 1283
HpyAV CCTTC 3 cut(s) 91, 203, 1058
HpyCH4III ACNGT 5 cut(s) 181, 622, 856, 947, 1103
HpyCH4IV ACGT 4 cut(s) 727, 952, 1160, 1328
HpyF10VI GCNNNNNNNGC 4 cut(s) 236, 280, 473, 1415
HpyF3I CTNAG 6 cut(s) 24, 163, 194, 1317, 1520, 1530
HpySE526I ACGT 4 cut(s) 727, 952, 1160, 1328
HspAI GCGC 4 cut(s) 250, 272, 274, 574
Ksp22I TGATCA 1 cut(s) 364
Kzo9I GATC 3 cut(s) 356, 364, 1232
LmnI GCTCC 3 cut(s) 10, 721, 1441
Lsp1109I GCAGC 7 cut(s) 190, 248, 485, 878, 1052, 1235, 1418
LweI GCATC 7 cut(s) 22, 292, 485, 878, 1269, 1382, 1405
MaeI CTAG 3 cut(s) 116, 287, 1548
MaeII ACGT 4 cut(s) 727, 952, 1160, 1328
MalI GATC 3 cut(s) 358, 366, 1234
MboI GATC 3 cut(s) 356, 364, 1232
MboII GAAGA 3 cut(s) 122, 407, 800
MfeI CAATTG 1 cut(s) 1095
MlsI TGGCCA 1 cut(s) 350
MluCI AATT 8 cut(s) 19, 70, 446, 643, 649, 660, 1095, 1126
MluNI TGGCCA 1 cut(s) 350
MlyI GAGTC 3 cut(s) 829, 928, 1522
MmeI TCCRAC 1 cut(s) 1324
Mox20I TGGCCA 1 cut(s) 350
Mph1103I ATGCAT 1 cut(s) 1369
MroXI GAANNNNTTC 2 cut(s) 217, 414
MscI TGGCCA 1 cut(s) 350
MseI TTAA 3 cut(s) 86, 980, 1082
MslI CAYNNNNRTG 2 cut(s) 528, 1423
Msp20I TGGCCA 1 cut(s) 350
MspA1I CMGCKG 3 cut(s) 239, 1226, 1409
MspCI CTTAAG 1 cut(s) 85
MspI CCGG 2 cut(s) 958, 1012
MspR9I CCNGG 5 cut(s) 107, 352, 959, 1250, 1257
MunI CAATTG 1 cut(s) 1095
Mva1269I GAATGC 2 cut(s) 1139, 1494
MvaI CCWGG 4 cut(s) 107, 352, 1250, 1257
MvnI CGCG 1 cut(s) 274
MwoI GCNNNNNNNGC 4 cut(s) 236, 280, 473, 1415
NciI CCSGG 1 cut(s) 959
NdeII GATC 3 cut(s) 356, 364, 1232
NlaIV GGNNCC 6 cut(s) 6, 723, 853, 988, 1254, 1437
NmuCI GTSAC 6 cut(s) 506, 515, 832, 1142, 1156, 1324
NsiI ATGCAT 1 cut(s) 1369
NspI RCATGY 2 cut(s) 230, 1461
NspV TTCGAA 2 cut(s) 546, 658
OliI CACNNNNGTG 1 cut(s) 1423
PagI TCATGA 2 cut(s) 406, 1498
PauI GCGCGC 1 cut(s) 272
PctI GAATGC 2 cut(s) 1139, 1494
PdmI GAANNNNTTC 2 cut(s) 217, 414
PfeI GAWTC 6 cut(s) 434, 440, 752, 971, 1469, 1516
PflFI GACNNNGTC 2 cut(s) 536, 1531
PfoI TCCNGGA 1 cut(s) 105
PinAI ACCGGT 1 cut(s) 1011
PkrI GCNGC 7 cut(s) 205, 238, 500, 868, 1042, 1225, 1408
PleI GAGTC 3 cut(s) 829, 928, 1522
PmaCI CACGTG 2 cut(s) 728, 1161
PmlI CACGTG 2 cut(s) 728, 1161
PpsI GAGTC 3 cut(s) 829, 928, 1522
Ppu21I YACGTR 2 cut(s) 728, 1161
PpuMI RGGWCCY 1 cut(s) 986
PsiI TTATAA 1 cut(s) 1350
Psp1406I AACGTT 1 cut(s) 952
Psp5II RGGWCCY 1 cut(s) 986
Psp6I CCWGG 4 cut(s) 105, 350, 1248, 1255
PspCI CACGTG 2 cut(s) 728, 1161
PspEI GGTNACC 1 cut(s) 506
PspGI CCWGG 4 cut(s) 105, 350, 1248, 1255
PspN4I GGNNCC 6 cut(s) 6, 723, 853, 988, 1254, 1437
PspPI GGNCC 9 cut(s) 103, 190, 299, 884, 986, 1067, 1240, 1443, 1544
PspPPI RGGWCCY 1 cut(s) 986
PstI CTGCAG 1 cut(s) 571
PsyI GACNNNGTC 2 cut(s) 536, 1531
PteI GCGCGC 1 cut(s) 272
PvuII CAGCTG 3 cut(s) 239, 1226, 1409
RsaI GTAC 4 cut(s) 1055, 1207, 1338, 1344
RsaNI GTAC 4 cut(s) 1054, 1206, 1337, 1343
RseI CAYNNNNRTG 2 cut(s) 528, 1423
SaqAI TTAA 3 cut(s) 86, 980, 1082
SatI GCNGC 7 cut(s) 204, 237, 499, 867, 1041, 1224, 1407
Sau3AI GATC 3 cut(s) 356, 364, 1232
Sau96I GGNCC 9 cut(s) 103, 190, 299, 884, 986, 1067, 1240, 1443, 1544
ScaI AGTACT 1 cut(s) 1207
SchI GAGTC 3 cut(s) 829, 928, 1522
ScrFI CCNGG 5 cut(s) 107, 352, 959, 1250, 1257
SfaNI GCATC 7 cut(s) 22, 292, 485, 878, 1269, 1382, 1405
SfcI CTRYAG 1 cut(s) 567
SfuI TTCGAA 2 cut(s) 546, 658
SinI GGWCC 4 cut(s) 103, 884, 986, 1240
SmiMI CAYNNNNRTG 2 cut(s) 528, 1423
SmlI CTYRAG 1 cut(s) 85
SmoI CTYRAG 1 cut(s) 85
Sse9I AATT 8 cut(s) 19, 70, 446, 643, 649, 660, 1095, 1126
SsiI CCGC 1 cut(s) 101
SspMI CTAG 3 cut(s) 116, 287, 1548
StyD4I CCNGG 5 cut(s) 105, 350, 957, 1248, 1255
StyI CCWWGG 3 cut(s) 1168, 1439, 1547
TaaI ACNGT 5 cut(s) 181, 622, 856, 947, 1103
TaiI ACGT 4 cut(s) 730, 955, 1163, 1331
TaqI TCGA 4 cut(s) 546, 658, 969, 1472
TasI AATT 8 cut(s) 19, 70, 446, 643, 649, 660, 1095, 1126
TatI WGTACW 2 cut(s) 1205, 1336
TfiI GAWTC 6 cut(s) 434, 440, 752, 971, 1469, 1516
Tru1I TTAA 3 cut(s) 86, 980, 1082
Tru9I TTAA 3 cut(s) 86, 980, 1082
TscAI CASTG 3 cut(s) 952, 1025, 1517
TseFI GTSAC 6 cut(s) 506, 515, 832, 1142, 1156, 1324
TseI GCWGC 7 cut(s) 203, 236, 498, 866, 1040, 1223, 1406
Tsp45I GTSAC 6 cut(s) 506, 515, 832, 1142, 1156, 1324
TspDTI ATGAA 6 cut(s) 33, 273, 423, 480, 1206, 1487
TspRI CASTG 3 cut(s) 952, 1025, 1517
Tth111I GACNNNGTC 2 cut(s) 536, 1531
Vha464I CTTAAG 1 cut(s) 85
VpaK11BI GGWCC 4 cut(s) 103, 884, 986, 1240
XapI RAATTY 5 cut(s) 19, 643, 649, 660, 1126
XbaI TCTAGA 2 cut(s) 115, 286
XceI RCATGY 2 cut(s) 230, 1461
XmaJI CCTAGG 1 cut(s) 1547
XmnI GAANNNNTTC 2 cut(s) 217, 414
XspI CTAG 3 cut(s) 116, 287, 1548
ZrmI AGTACT 1 cut(s) 1207
Zsp2I ATGCAT 1 cut(s) 1369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.