MD11G1190400.v1.1

NADH kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000832
Physical Location & Seq
Forward (+)
26871074 .. 26880429
9356 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1190400.v1.1.491

Sequence Viewer

Length: 1530 bp
ATGGCTCCCAGCAAGCTCAATTCTACTGGCGAACCAAGTGTTTCATGCTCACAGCCAGAGAACGGTTTTCTCAATTCGATTTCGCTTTTAAGTTCAGAGAAAGCAGTCCAGGAACTTTTTCATCAATCTCCCTTTCAGAGCACAGATGACCACCTCATAGAGTTCTCGGACGCTATGAGAACTGTTGAAAAGGCCCTGAGACGGGCTGCTGAATGGAAGGCTTCTGCTCAAGCTGAGGCAGCTGAATGGAAGCGTAAATATGAACTGGAGAGGGCTCGCAATCTACATTTGGAACATAAAGAGCAATCAAGTAAAGAGAATAACTGCATGGATGAGAGGACCGAGAACTTGGGCAGCCAATCAAATGAGCAATCTGAACAGTGTTGTGGGAGGAATGGGATATGCTCCCATGAAGTTCTTCGGGATGAAAGCTGTTCTGATTCCAAGGCATTTCTCAATATATATACCAGAAAGGCATCATTTAAACTTTCATGGTGGTGCAATGGCGATGAGAGTGACCAGCACAAGCATGACATTGTCTCTTTTGAAAGGGGAAACATTACAACTGCAGAGCGTAGCAGTAAACAGACTGTGATTATATTGACGAAACCAAATTCAACTTCTGTTCGAATTCTATGTGCAGAGATGGTCAGATGGTTGAGTGAGCAGAAAAAGTTAAATATTTACGTGGAACCACGTGTAAGAGCTGAACTTCTAACAGAGTCATCTTACTTCAACTTCGTCCATACATGGAAGGATGAGACCGAAATAATGCTCCTGCACACAAAAGTGGACCTTGTGGTAACTCTTGGCGGGGATGGAACTGTCCTCTGGGCAGCATCTATGTTCAAGGGACCAGTTCCTCCCATTGTGCCGTTTTCATTAGGGTCACTGGGATTTATGACTCCTTTTCACAGTGAACGCTACCGAGACTATCTTGATTCAATTTTAAACGGTCCCATTAATATCACGTTGCGACACCGGTTGCAGTGCCATGTTATTAGAGAAGCAGCCAAAAATAAGTATGAAACTGAAGGGCCAATGCTTGTACTAAACGAGGTTACAATCGACCGTGGGATATCATCATACCTCACAAATTTAGAATGCTATTGTGACAATTCTTTTGTCACATGTGTCCAAGGAGATGGGCTAATATTATCAACAACTTCTGGCAGTACCGCATATTCATTAGCAGCTGGAGGATCAATGGTACATCCCCAGGTGCCTGGAATTCTTTTTACTCCTATCTGTCCACATTCCTTATCGTTTCGGCCGCTGATATTACCTGAGCATGTGACGTTGCGAGTGCAAGTACCCTCCAACAGCAGAAGTCATGCGTGGGCGTCCTTTGATGGAAAGGACAGGAAACGGTTGGCTGCTGGCGATGCACTTGTGTGCAGCATGGCGCCTTGGCCTGTCCCCACTGCATGTCAAGTTGATTCCACCAGTGACTTCTTGAACAGCATCCATGACGGCCTCCACTGGAACCTTCGAAAGACTCAGTCTTTCGATGGCCCTCGGGATGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00760 ko01100 map00760 map01100
Pfam Domains
Protein Families
NAD_kinase

Protein Analysis

510

Amino Acids

57.03

Weight (kDa)

6.07

Isoelectric Point (pI)

48.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_kinase PF01513 198 - 319 9.9e-19 ATP-NAD kinase N-terminal domain
NAD_kinase_C PF20143 351 - 469 9.9e-31 ATP-NAD kinase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21070 AT3G21070 AT3G21070 AT3G21070
fragaria_vesca FvH4_3g28510
malus_domestica MD03G1172500.v1.1 MD11G1190400.v1.1
prunus_persica Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1
pyrus_communis pycom03g12970 pycom11g16670
rosa_chinensis RchiOBHm_Chr5g0052801
rosa_laevigata RLG00000034795
rosa_multiflora Rmu_sc0004335.1_g000006 Rmu_sc0032421.1_g000001 Rmu_ssc0000311.1_g000025
rosa_roxburghii Rroxscaffold_1G00028620 Rroxscaffold_4G00318540
rosa_rugosa Rorug05G0269700 Rorug05G0269800
rosa_samantha Rh5AG341600 Rh5BG352300 Rh5CG379000 Rh5DG368700
rosa_wichuraiana Rw5G032210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1222, 1405
AciI CCGC 3 cut(s) 813, 1179, 1274
AclWI GGATC 1 cut(s) 1210
AcoI YGGCCR 1 cut(s) 1271
AcsI RAATTY 4 cut(s) 613, 630, 1096, 1230
AcuI CTGAAG 1 cut(s) 1053
AcvI CACGTG 1 cut(s) 698
AcyI GRCGYC 2 cut(s) 1343, 1406
AfaI GTAC 4 cut(s) 1050, 1177, 1212, 1314
AfiI CCNNNNNNNGG 3 cut(s) 62, 201, 202
AflIII ACRYGT 2 cut(s) 697, 1130
AgeI ACCGGT 1 cut(s) 981
AgsI TTSAA 7 cut(s) 188, 548, 618, 736, 850, 945, 1459
AjnI CCWGG 3 cut(s) 108, 1218, 1225
AjuI GAANNNNNNNTTGG 2 cut(s) 604, 636
AleI CACNNNNGTG 2 cut(s) 788, 1393
AluBI AGCT 6 cut(s) 16, 233, 242, 432, 707, 1196
AluI AGCT 6 cut(s) 16, 233, 242, 432, 707, 1196
Alw21I GWGCWC 1 cut(s) 143
Alw26I GTCTC 4 cut(s) 193, 544, 755, 924
AlwI GGATC 1 cut(s) 1210
Ama87I CYCGRG 1 cut(s) 1518
AoxI GGCC 6 cut(s) 192, 1037, 1271, 1412, 1474, 1513
ApeKI GCWGC 8 cut(s) 206, 239, 354, 836, 1010, 1193, 1376, 1398
ApoI RAATTY 4 cut(s) 613, 630, 1096, 1230
ArsI GACNNNNNNTTYG 2 cut(s) 1106, 1138
AseI ATTAAT 1 cut(s) 963
AsiGI ACCGGT 1 cut(s) 981
Asp700I GAANNNNTTC 2 cut(s) 117, 417
AspLEI GCGC 1 cut(s) 1408
AspS9I GGNCC 7 cut(s) 193, 339, 793, 854, 956, 1037, 1514
AsuII TTCGAA 2 cut(s) 628, 1492
AvaI CYCGRG 1 cut(s) 1518
AvaII GGWCC 4 cut(s) 339, 793, 854, 956
BanI GGYRCC 2 cut(s) 1222, 1405
BanII GRGCYC 1 cut(s) 277
BbrPI CACGTG 1 cut(s) 698
Bbv12I GWGCWC 1 cut(s) 143
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 8 cut(s) 193, 251, 366, 848, 1022, 1205, 1363, 1410
BccI CCATC 6 cut(s) 640, 648, 812, 1139, 1346, 1505
BceAI ACGGC 2 cut(s) 859, 1489
BciT130I CCWGG 3 cut(s) 110, 1220, 1227
BcoDI GTCTC 4 cut(s) 193, 544, 755, 924
BfmI CTRYAG 1 cut(s) 567
BfoI RGCGCY 1 cut(s) 1409
BisI GCNGC 9 cut(s) 207, 240, 355, 837, 1011, 1194, 1274, 1377, 1399
BlsI GCNGC 9 cut(s) 208, 241, 356, 838, 1012, 1195, 1275, 1378, 1400
Bme1390I CCNGG 3 cut(s) 110, 1220, 1227
Bme18I GGWCC 4 cut(s) 339, 793, 854, 956
BmeT110I CYCGRG 1 cut(s) 1518
BmgT120I GGNCC 7 cut(s) 193, 339, 793, 854, 956, 1037, 1514
BmiI GGNNCC 7 cut(s) 6, 693, 855, 958, 1224, 1407, 1487
BmrFI CCNGG 3 cut(s) 110, 1220, 1227
BmrI ACTGGG 1 cut(s) 902
BmsI GCATC 5 cut(s) 485, 848, 1375, 1473, 1513
BmuI ACTGGG 1 cut(s) 902
BpmI CTGGAG 2 cut(s) 287, 1218
Bpu10I CCTNAGC 2 cut(s) 234, 1287
Bpu14I TTCGAA 2 cut(s) 628, 1492
BpuEI CTTGAG 1 cut(s) 213
BsaAI YACGTR 2 cut(s) 688, 698
BsaHI GRCGYC 2 cut(s) 1343, 1406
BsaI GGTCTC 1 cut(s) 755
BsaJI CCNNGG 6 cut(s) 444, 1072, 1138, 1218, 1409, 1517
BsaWI WCCGGW 1 cut(s) 981
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 201, 202
Bse118I RCCGGY 1 cut(s) 981
Bse1I ACTGG 6 cut(s) 31, 270, 857, 897, 1446, 1487
Bse3DI GCAATG 1 cut(s) 508
BseBI CCWGG 3 cut(s) 110, 1220, 1227
BseDI CCNNGG 6 cut(s) 444, 1072, 1138, 1218, 1409, 1517
BseGI GGATG 7 cut(s) 337, 430, 763, 823, 1213, 1464, 1528
BseLI CCNNNNNNNGG 3 cut(s) 62, 201, 202
BseMI GCAATG 1 cut(s) 508
BseMII CTCAG 4 cut(s) 188, 225, 1278, 1514
BseNI ACTGG 6 cut(s) 31, 270, 857, 897, 1446, 1487
BseX3I CGGCCG 1 cut(s) 1271
BseXI GCAGC 8 cut(s) 193, 251, 366, 848, 1022, 1205, 1363, 1410
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 3 cut(s) 660, 764, 1417
Bsh1285I CGRYCG 2 cut(s) 1072, 1274
BshFI GGCC 6 cut(s) 194, 1039, 1273, 1414, 1476, 1515
BshNI GGYRCC 2 cut(s) 1222, 1405
BshTI ACCGGT 1 cut(s) 981
BsiEI CGRYCG 2 cut(s) 1072, 1274
BsiHKAI GWGCWC 1 cut(s) 143
BsiHKCI CYCGRG 1 cut(s) 1518
BsiSI CCGG 1 cut(s) 982
BslFI GGGAC 3 cut(s) 867, 942, 1403
BslI CCNNNNNNNGG 3 cut(s) 62, 201, 202
BsmAI GTCTC 4 cut(s) 193, 544, 755, 924
BsmBI CGTCTC 1 cut(s) 193
BsmFI GGGAC 3 cut(s) 867, 942, 1403
BsmI GAATGC 1 cut(s) 1109
BsnI GGCC 6 cut(s) 194, 1039, 1273, 1414, 1476, 1515
Bso31I GGTCTC 1 cut(s) 755
BsoBI CYCGRG 1 cut(s) 1518
Bsp119I TTCGAA 2 cut(s) 628, 1492
Bsp1286I GDGCHC 2 cut(s) 143, 277
Bsp143I GATC 1 cut(s) 1202
BspACI CCGC 3 cut(s) 813, 1179, 1274
BspANI GGCC 6 cut(s) 194, 1039, 1273, 1414, 1476, 1515
BspCNI CTCAG 4 cut(s) 189, 226, 1279, 1513
BspLI GGNNCC 7 cut(s) 6, 693, 855, 958, 1224, 1407, 1487
BspMAI CTGCAG 1 cut(s) 571
BspPI GGATC 1 cut(s) 1210
BspT104I TTCGAA 2 cut(s) 628, 1492
BspT107I GGYRCC 2 cut(s) 1222, 1405
BspTNI GGTCTC 1 cut(s) 755
BsrDI GCAATG 1 cut(s) 508
BsrFI RCCGGY 1 cut(s) 981
BsrI ACTGG 6 cut(s) 31, 270, 857, 897, 1446, 1487
BssAI RCCGGY 1 cut(s) 981
BssECI CCNNGG 6 cut(s) 444, 1072, 1138, 1218, 1409, 1517
BssMI GATC 1 cut(s) 1202
BssNI GRCGYC 2 cut(s) 1343, 1406
BssT1I CCWWGG 3 cut(s) 444, 1138, 1409
Bst2UI CCWGG 3 cut(s) 110, 1220, 1227
Bst4CI ACNGT 9 cut(s) 65, 184, 381, 592, 826, 917, 956, 1073, 1371
BstACI GRCGYC 2 cut(s) 1343, 1406
BstBAI YACGTR 2 cut(s) 688, 698
BstBI TTCGAA 2 cut(s) 628, 1492
BstC8I GCNNGC 3 cut(s) 14, 277, 1381
BstDEI CTNAG 4 cut(s) 197, 234, 1287, 1500
BstDSI CCRYGG 1 cut(s) 1072
BstF5I GGATG 7 cut(s) 337, 430, 763, 823, 1213, 1464, 1528
BstH2I RGCGCY 1 cut(s) 1409
BstHHI GCGC 1 cut(s) 1408
BstKTI GATC 1 cut(s) 1205
BstMAI GTCTC 4 cut(s) 193, 544, 755, 924
BstMBI GATC 1 cut(s) 1202
BstMCI CGRYCG 2 cut(s) 1072, 1274
BstMWI GCNNNNNNNGC 2 cut(s) 239, 1385
BstNI CCWGG 3 cut(s) 110, 1220, 1227
BstNSI RCATGY 3 cut(s) 1134, 1295, 1431
BstSCI CCNGG 3 cut(s) 108, 1218, 1225
BstSFI CTRYAG 1 cut(s) 567
BstV1I GCAGC 8 cut(s) 193, 251, 366, 848, 1022, 1205, 1363, 1410
BstXI CCANNNNNNTGG 2 cut(s) 1145, 1226
BstZI CGGCCG 1 cut(s) 1271
BsuRI GGCC 6 cut(s) 194, 1039, 1273, 1414, 1476, 1515
BtgI CCRYGG 1 cut(s) 1072
BtgZI GCGATG 2 cut(s) 522, 1398
BtsCI GGATG 7 cut(s) 337, 430, 763, 823, 1213, 1464, 1528
BtsI GCAGTG 2 cut(s) 995, 1422
BtsIMutI CAGTG 7 cut(s) 386, 890, 922, 995, 1422, 1453, 1480
Cac8I GCNNGC 3 cut(s) 14, 277, 1381
CfoI GCGC 1 cut(s) 1408
Cfr10I RCCGGY 1 cut(s) 981
Cfr13I GGNCC 7 cut(s) 193, 339, 793, 854, 956, 1037, 1514
CseI GACGC 2 cut(s) 179, 1332
Csp6I GTAC 4 cut(s) 1049, 1176, 1211, 1313
CspAI ACCGGT 1 cut(s) 981
CviQI GTAC 4 cut(s) 1049, 1176, 1211, 1313
DdeI CTNAG 4 cut(s) 197, 234, 1287, 1500
DinI GGCGCC 1 cut(s) 1407
DpnI GATC 1 cut(s) 1204
DpnII GATC 1 cut(s) 1202
DraI TTTAAA 2 cut(s) 484, 951
EaeI YGGCCR 1 cut(s) 1271
EagI CGGCCG 1 cut(s) 1271
EclXI CGGCCG 1 cut(s) 1271
Eco130I CCWWGG 3 cut(s) 444, 1138, 1409
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 755
Eco32I GATATC 1 cut(s) 1080
Eco47I GGWCC 4 cut(s) 339, 793, 854, 956
Eco52I CGGCCG 1 cut(s) 1271
Eco57I CTGAAG 1 cut(s) 1053
Eco72I CACGTG 1 cut(s) 698
Eco88I CYCGRG 1 cut(s) 1518
EcoO109I RGGNCCY 1 cut(s) 193
EcoRI GAATTC 2 cut(s) 630, 1230
EcoRII CCWGG 3 cut(s) 108, 1218, 1225
EcoRV GATATC 1 cut(s) 1080
EcoT14I CCWWGG 3 cut(s) 444, 1138, 1409
EcoT22I ATGCAT 1 cut(s) 1528
EcoT38I GRGCYC 1 cut(s) 277
EgeI GGCGCC 1 cut(s) 1407
EheI GGCGCC 1 cut(s) 1407
ErhI CCWWGG 3 cut(s) 444, 1138, 1409
Esp3I CGTCTC 1 cut(s) 193
FalI AAGNNNNNCTT 2 cut(s) 780, 812
FaqI GGGAC 3 cut(s) 867, 942, 1403
FauI CCCGC 1 cut(s) 806
Fnu4HI GCNGC 9 cut(s) 207, 240, 355, 837, 1011, 1194, 1274, 1377, 1399
FokI GGATG 6 cut(s) 344, 437, 770, 830, 1200, 1451
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 9 cut(s) 207, 240, 355, 837, 1011, 1194, 1274, 1377, 1399
GlaI GCGC 1 cut(s) 1407
GluI GCNGC 9 cut(s) 207, 240, 355, 837, 1011, 1194, 1274, 1377, 1399
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 2 cut(s) 287, 1218
HaeII RGCGCY 1 cut(s) 1409
HaeIII GGCC 6 cut(s) 194, 1039, 1273, 1414, 1476, 1515
HapII CCGG 1 cut(s) 982
HgaI GACGC 2 cut(s) 179, 1332
HhaI GCGC 1 cut(s) 1408
Hin1I GRCGYC 2 cut(s) 1343, 1406
Hin6I GCGC 1 cut(s) 1406
HinP1I GCGC 1 cut(s) 1406
HinfI GANTC 6 cut(s) 440, 722, 904, 941, 1439, 1498
HpaII CCGG 1 cut(s) 982
Hpy166II GTNNAC 4 cut(s) 584, 793, 920, 1253
Hpy188I TCNGA 6 cut(s) 97, 138, 169, 376, 439, 653
Hpy188III TCNNGA 4 cut(s) 422, 938, 1456, 1520
Hpy8I GTNNAC 4 cut(s) 584, 793, 920, 1253
HpyAV CCTTC 4 cut(s) 211, 748, 1028, 1499
HpyCH4III ACNGT 9 cut(s) 65, 184, 381, 592, 826, 917, 956, 1073, 1371
HpyCH4IV ACGT 4 cut(s) 687, 697, 971, 1298
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 1385
HpyF3I CTNAG 4 cut(s) 197, 234, 1287, 1500
HpySE526I ACGT 4 cut(s) 687, 697, 971, 1298
Hsp92I GRCGYC 2 cut(s) 1343, 1406
HspAI GCGC 1 cut(s) 1406
KasI GGCGCC 1 cut(s) 1405
Kzo9I GATC 1 cut(s) 1202
LmnI GCTCC 3 cut(s) 10, 410, 780
Lsp1109I GCAGC 8 cut(s) 193, 251, 366, 848, 1022, 1205, 1363, 1410
LweI GCATC 5 cut(s) 485, 848, 1375, 1473, 1513
MaeII ACGT 4 cut(s) 687, 697, 971, 1298
MaeIII GTNAC 8 cut(s) 515, 802, 888, 1060, 1112, 1126, 1294, 1448
MalI GATC 1 cut(s) 1204
MboI GATC 1 cut(s) 1202
MboII GAAGA 1 cut(s) 410
MhlI GDGCHC 2 cut(s) 143, 277
MluCI AATT 8 cut(s) 19, 73, 613, 630, 945, 1096, 1117, 1230
Mly113I GGCGCC 1 cut(s) 1406
MlyI GAGTC 3 cut(s) 731, 898, 1492
MmeI TCCRAC 1 cut(s) 1344
Mph1103I ATGCAT 1 cut(s) 1528
MroXI GAANNNNTTC 2 cut(s) 117, 417
MseI TTAA 5 cut(s) 89, 483, 677, 950, 963
MslI CAYNNNNRTG 4 cut(s) 496, 528, 788, 1393
MspA1I CMGCKG 3 cut(s) 242, 1196, 1276
MspI CCGG 1 cut(s) 982
MspR9I CCNGG 3 cut(s) 110, 1220, 1227
Mva1269I GAATGC 1 cut(s) 1109
MvaI CCWGG 3 cut(s) 110, 1220, 1227
MwoI GCNNNNNNNGC 2 cut(s) 239, 1385
NarI GGCGCC 1 cut(s) 1406
NdeII GATC 1 cut(s) 1202
NlaIV GGNNCC 7 cut(s) 6, 693, 855, 958, 1224, 1407, 1487
NmuCI GTSAC 6 cut(s) 515, 888, 1112, 1126, 1294, 1448
NsiI ATGCAT 1 cut(s) 1528
NspI RCATGY 3 cut(s) 1134, 1295, 1431
NspV TTCGAA 2 cut(s) 628, 1492
OliI CACNNNNGTG 2 cut(s) 788, 1393
PciI ACATGT 1 cut(s) 1130
PctI GAATGC 1 cut(s) 1109
PdmI GAANNNNTTC 2 cut(s) 117, 417
PfeI GAWTC 3 cut(s) 440, 941, 1439
PflFI GACNNNGTC 2 cut(s) 536, 1501
PfoI TCCNGGA 1 cut(s) 108
PinAI ACCGGT 1 cut(s) 981
PkrI GCNGC 9 cut(s) 208, 241, 356, 838, 1012, 1195, 1275, 1378, 1400
PleI GAGTC 3 cut(s) 730, 898, 1492
PluTI GGCGCC 1 cut(s) 1409
PmaCI CACGTG 1 cut(s) 698
PmlI CACGTG 1 cut(s) 698
PpsI GAGTC 3 cut(s) 730, 898, 1492
Ppu21I YACGTR 2 cut(s) 688, 698
PscI ACATGT 1 cut(s) 1130
PshBI ATTAAT 1 cut(s) 963
Psp6I CCWGG 3 cut(s) 108, 1218, 1225
PspCI CACGTG 1 cut(s) 698
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 3 cut(s) 108, 1218, 1225
PspN4I GGNNCC 7 cut(s) 6, 693, 855, 958, 1224, 1407, 1487
PspPI GGNCC 7 cut(s) 193, 339, 793, 854, 956, 1037, 1514
PstI CTGCAG 1 cut(s) 571
PsyI GACNNNGTC 2 cut(s) 536, 1501
PvuII CAGCTG 2 cut(s) 242, 1196
RsaI GTAC 4 cut(s) 1050, 1177, 1212, 1314
RsaNI GTAC 4 cut(s) 1049, 1176, 1211, 1313
RseI CAYNNNNRTG 4 cut(s) 496, 528, 788, 1393
SaqAI TTAA 5 cut(s) 89, 483, 677, 950, 963
SatI GCNGC 9 cut(s) 207, 240, 355, 837, 1011, 1194, 1274, 1377, 1399
Sau3AI GATC 1 cut(s) 1202
Sau96I GGNCC 7 cut(s) 193, 339, 793, 854, 956, 1037, 1514
SchI GAGTC 3 cut(s) 731, 898, 1492
ScrFI CCNGG 3 cut(s) 110, 1220, 1227
SduI GDGCHC 2 cut(s) 143, 277
SfaNI GCATC 5 cut(s) 485, 848, 1375, 1473, 1513
SfcI CTRYAG 1 cut(s) 567
SfoI GGCGCC 1 cut(s) 1407
SfuI TTCGAA 2 cut(s) 628, 1492
SinI GGWCC 4 cut(s) 339, 793, 854, 956
SmiMI CAYNNNNRTG 4 cut(s) 496, 528, 788, 1393
SmlI CTYRAG 1 cut(s) 228
SmoI CTYRAG 1 cut(s) 228
Sse9I AATT 8 cut(s) 19, 73, 613, 630, 945, 1096, 1117, 1230
SsiI CCGC 3 cut(s) 813, 1179, 1274
SspDI GGCGCC 1 cut(s) 1405
SspI AATATT 2 cut(s) 682, 1155
StyD4I CCNGG 3 cut(s) 108, 1218, 1225
StyI CCWWGG 3 cut(s) 444, 1138, 1409
TaaI ACNGT 9 cut(s) 65, 184, 381, 592, 826, 917, 956, 1073, 1371
TaiI ACGT 4 cut(s) 690, 700, 974, 1301
TaqI TCGA 5 cut(s) 77, 628, 1068, 1492, 1509
TaqII GACCGA 2 cut(s) 356, 779
TasI AATT 8 cut(s) 19, 73, 613, 630, 945, 1096, 1117, 1230
TatI WGTACW 1 cut(s) 1048
TauI GCSGC 1 cut(s) 1276
TfiI GAWTC 3 cut(s) 440, 941, 1439
Tru1I TTAA 5 cut(s) 89, 483, 677, 950, 963
Tru9I TTAA 5 cut(s) 89, 483, 677, 950, 963
TscAI CASTG 7 cut(s) 386, 897, 922, 995, 1429, 1453, 1487
TseFI GTSAC 6 cut(s) 515, 888, 1112, 1126, 1294, 1448
TseI GCWGC 8 cut(s) 206, 239, 354, 836, 1010, 1193, 1376, 1398
Tsp45I GTSAC 6 cut(s) 515, 888, 1112, 1126, 1294, 1448
TspDTI ATGAA 9 cut(s) 33, 110, 276, 426, 441, 480, 870, 1041, 1176
TspRI CASTG 7 cut(s) 386, 897, 922, 995, 1429, 1453, 1487
Tth111I GACNNNGTC 2 cut(s) 536, 1501
VpaK11BI GGWCC 4 cut(s) 339, 793, 854, 956
VspI ATTAAT 1 cut(s) 963
XapI RAATTY 4 cut(s) 613, 630, 1096, 1230
XceI RCATGY 3 cut(s) 1134, 1295, 1431
XmnI GAANNNNTTC 2 cut(s) 117, 417
Zsp2I ATGCAT 1 cut(s) 1528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.