MD03G1172500.v1.1

NADH kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000832
Physical Location & Seq
Forward (+)
23527042 .. 23538462
11421 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1172500.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGGCTCCCAGCAAGAATTCTACTGGCGAACCAAGTGTTTCATGCTCACAACCAGAGAACGGTTTTCTCAATTCGATTTCTCTTTTAAGTTCAGAGAAAGCAGTCCAGGAACTTCTCCAGCAATCTTCTGTTCAAAGCACAGATGACCACCTCATGGAGTTCGCAGACGCTATGAGAACTGTTGCAAAGGCCCTGAGACGGGCTGCTGAAGGAAAGGCTTCGGCACAAGCTGAGGCAGCTGAATGGAAGCGTAAATACGAACTGGAGAGGACTCACAATCTACATTTGGAACATAAAGAGCAATCAAGTAAAGAGACTAACAGCATTGGAGAGAGGACAGAGAACTTGGCCAGCCAATCAAATGAGCAATCTGAACAGTGTTGTGGGATGAATGGGATATGCTCCCATGAAGTTCTTCGGGATGATGAAAGCTGTTCCGATTCCAAGGTGTTCCCCAATAAATTTACCAGAAAGGCATCATTTAAACTTTCATGGTGGTGCAACGGCGATGATAGTGACCAGCACAAGCATGACATCGTCTCTTTTGAAAGGGGAAACATTACAACTGCAGAGCGTAGCAGTAAACAGATTGCGTTGAAGTGGGAATCTCAGCCACAGACTGTGATTATATTGACGAAACCAAATTCAATTTCTGTTCGAATTCTGTGTGCAGAGATGGTCAGATGGTTGAGAGAGCAGAAAAAGTTAAATATTTACGTGGAACCACGAGTAAGAGCTGAACTTCTTACGGAGTCATCTATCTTCAACTTTGTCCATACATGGAAGGATGAGAGCGAAATAATGCTGCTGCACACAAAAGTAGACCTTGTCATAACTCTTGGCGGGGATGGAACTGTCCTCTGGGCAGCATCTATGTTCAAAGGACCAGTTCCTCCTGTTGTGCCGTTTTCTTTAGGGTCACTGGGATTTATGACTCCTTTTCACAGTGAGCGCTACCGAGACTATCTTGATTTAATTTTAAAAGGTCCCTTTAATATCACATTGCGACACCGGTTGCAGTGCCACGTTATTAGAGAAGCAGCCAAAAATGAGTACGAAACTGAAGGACCAATGCTTGTACTAAATGAGGTTACAATTGACCGTGGGATATCATCATACCTCACAAATTTGGAATGTTATTGTGACAATTCTTTTGTCACAAGTGTCCAAGGAGATGGGCTAATATTATCAACGACGTCTGGCAGTACCGCGTATTCATTAGCAGCTGGAGGATCAATGGTCCACCCCCAGGTTCCTGGAATTCTTTTTACACCTATCTGTCCACATTCCTTATCGTTTCGGCCTCTGATATTACCTGAGCACGTGACTTTGCGAGTACAAGTACCTTTCAACAGCAGAAGCCATGCATGGGCGTCGTTTGATGGAAAAGACAGGAAACGGTTGGCTCCTGGTGATGCACTTGTGTGCAGCATGGCGCCTTGGCCTGTCCCTACTGCATGTCAAGTTGATTCCACCAGTGACTTCTTGAACAGCATCCATGACGGGCTTCACTGGAATCTGAGAAAGACTCAGTCTTTCGATGGCCCTCGGGAAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00760 ko01100 map00760 map01100
Pfam Domains
Protein Families
NAD_kinase

Protein Analysis

520

Amino Acids

58.0

Weight (kDa)

6.08

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_kinase PF01513 208 - 329 1.1e-17 ATP-NAD kinase N-terminal domain
NAD_kinase_C PF20143 361 - 479 1.9e-31 ATP-NAD kinase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21070 AT3G21070 AT3G21070 AT3G21070
fragaria_vesca FvH4_3g28510
malus_domestica MD03G1172500.v1.1 MD11G1190400.v1.1
prunus_persica Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1
pyrus_communis pycom03g12970 pycom11g16670
rosa_chinensis RchiOBHm_Chr5g0052801
rosa_laevigata RLG00000034795
rosa_multiflora Rmu_sc0004335.1_g000006 Rmu_sc0032421.1_g000001 Rmu_ssc0000311.1_g000025
rosa_roxburghii Rroxscaffold_1G00028620 Rroxscaffold_4G00318540
rosa_rugosa Rorug05G0269700 Rorug05G0269800
rosa_samantha Rh5AG341600 Rh5BG352300 Rh5CG379000 Rh5DG368700
rosa_wichuraiana Rw5G032210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1199
AccB1I GGYRCC 1 cut(s) 1435
AccB7I CCANNNNNTGG 1 cut(s) 154
AccI GTMKAC 1 cut(s) 822
AccII CGCG 1 cut(s) 1211
AciI CCGC 2 cut(s) 843, 1209
AclWI GGATC 1 cut(s) 1240
AcoI YGGCCR 1 cut(s) 348
AcsI RAATTY 6 cut(s) 16, 461, 643, 660, 1126, 1260
AcuI CTGAAG 2 cut(s) 228, 1083
AcvI CACGTG 1 cut(s) 1324
AcyI GRCGYC 3 cut(s) 1196, 1373, 1436
AfaI GTAC 5 cut(s) 1055, 1080, 1207, 1338, 1344
AfeI AGCGCT 1 cut(s) 953
AfiI CCNNNNNNNGG 6 cut(s) 59, 154, 198, 199, 1249, 1369
AgeI ACCGGT 1 cut(s) 1011
AgsI TTSAA 8 cut(s) 134, 548, 598, 648, 766, 880, 1351, 1489
AjnI CCWGG 4 cut(s) 105, 1248, 1255, 1408
AjuI GAANNNNNNNTTGG 2 cut(s) 634, 666
AleI CACNNNNGTG 1 cut(s) 1423
AluBI AGCT 5 cut(s) 230, 239, 432, 737, 1226
AluI AGCT 5 cut(s) 230, 239, 432, 737, 1226
Alw21I GWGCWC 1 cut(s) 1323
Alw26I GTCTC 4 cut(s) 190, 308, 544, 954
AlwI GGATC 1 cut(s) 1240
Ama87I CYCGRG 1 cut(s) 1548
Aor51HI AGCGCT 1 cut(s) 953
AoxI GGCC 5 cut(s) 189, 348, 1301, 1442, 1543
ApeKI GCWGC 8 cut(s) 203, 236, 805, 808, 866, 1040, 1223, 1428
ApoI RAATTY 6 cut(s) 16, 461, 643, 660, 1126, 1260
ArsI GACNNNNNNTTYG 2 cut(s) 1136, 1168
AsiGI ACCGGT 1 cut(s) 1011
Asp700I GAANNNNTTC 2 cut(s) 217, 414
AspLEI GCGC 2 cut(s) 954, 1438
AspS9I GGNCC 6 cut(s) 190, 884, 986, 1067, 1240, 1544
AsuHPI GGTGA 1 cut(s) 1424
AsuII TTCGAA 1 cut(s) 658
AvaI CYCGRG 1 cut(s) 1548
AvaII GGWCC 4 cut(s) 884, 986, 1067, 1240
BalI TGGCCA 1 cut(s) 350
BanI GGYRCC 1 cut(s) 1435
BarI GAAGNNNNNNTAC 2 cut(s) 239, 271
BauI CACGAG 1 cut(s) 726
BbrPI CACGTG 1 cut(s) 1324
Bbv12I GWGCWC 1 cut(s) 1323
BbvCI CCTCAGC 1 cut(s) 231
BbvI GCAGC 8 cut(s) 190, 248, 792, 795, 878, 1052, 1235, 1440
BccI CCATC 6 cut(s) 670, 678, 842, 1169, 1376, 1535
BceAI ACGGC 2 cut(s) 520, 889
BcgI CGANNNNNNTGC 2 cut(s) 1356, 1390
BciT130I CCWGG 4 cut(s) 107, 1250, 1257, 1410
BcoDI GTCTC 4 cut(s) 190, 308, 544, 954
BfmI CTRYAG 1 cut(s) 567
BfoI RGCGCY 2 cut(s) 955, 1439
BisI GCNGC 8 cut(s) 204, 237, 806, 809, 867, 1041, 1224, 1429
BlsI GCNGC 8 cut(s) 205, 238, 807, 810, 868, 1042, 1225, 1430
Bme1390I CCNGG 4 cut(s) 107, 1250, 1257, 1410
Bme18I GGWCC 4 cut(s) 884, 986, 1067, 1240
BmeT110I CYCGRG 1 cut(s) 1548
BmgT120I GGNCC 6 cut(s) 190, 884, 986, 1067, 1240, 1544
BmiI GGNNCC 6 cut(s) 6, 723, 988, 1254, 1407, 1437
BmrFI CCNGG 4 cut(s) 107, 1250, 1257, 1410
BmrI ACTGGG 1 cut(s) 932
BmsI GCATC 4 cut(s) 485, 878, 1405, 1503
BmuI ACTGGG 1 cut(s) 932
BplI GAGNNNNNCTC 2 cut(s) 1513, 1545
BpmI CTGGAG 3 cut(s) 101, 284, 1248
Bpu10I CCTNAGC 2 cut(s) 231, 1317
Bpu14I TTCGAA 1 cut(s) 658
BsaAI YACGTR 2 cut(s) 718, 1324
BsaHI GRCGYC 3 cut(s) 1196, 1373, 1436
BsaJI CCNNGG 6 cut(s) 444, 1102, 1168, 1248, 1439, 1547
BsaWI WCCGGW 1 cut(s) 1011
Bsc4I CCNNNNNNNGG 6 cut(s) 59, 154, 198, 199, 1249, 1369
Bse118I RCCGGY 1 cut(s) 1011
Bse1I ACTGG 6 cut(s) 28, 267, 887, 927, 1476, 1517
Bse3DI GCAATG 1 cut(s) 1001
BseBI CCWGG 4 cut(s) 107, 1250, 1257, 1410
BseDI CCNNGG 6 cut(s) 444, 1102, 1168, 1248, 1439, 1547
BseGI GGATG 5 cut(s) 393, 427, 793, 853, 1494
BseLI CCNNNNNNNGG 6 cut(s) 59, 154, 198, 199, 1249, 1369
BseMI GCAATG 1 cut(s) 1001
BseMII CTCAG 6 cut(s) 185, 222, 623, 1308, 1511, 1544
BseNI ACTGG 6 cut(s) 28, 267, 887, 927, 1476, 1517
BseXI GCAGC 8 cut(s) 190, 248, 792, 795, 878, 1052, 1235, 1440
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 3 cut(s) 690, 794, 1447
Bsh1236I CGCG 1 cut(s) 1211
BshFI GGCC 5 cut(s) 191, 350, 1303, 1444, 1545
BshNI GGYRCC 1 cut(s) 1435
BshTI ACCGGT 1 cut(s) 1011
BsiHKAI GWGCWC 1 cut(s) 1323
BsiHKCI CYCGRG 1 cut(s) 1548
BsiSI CCGG 1 cut(s) 1012
BslFI GGGAC 2 cut(s) 972, 1433
BslI CCNNNNNNNGG 6 cut(s) 59, 154, 198, 199, 1249, 1369
BsmAI GTCTC 4 cut(s) 190, 308, 544, 954
BsmBI CGTCTC 2 cut(s) 190, 544
BsmFI GGGAC 2 cut(s) 972, 1433
BsnI GGCC 5 cut(s) 191, 350, 1303, 1444, 1545
BsoBI CYCGRG 1 cut(s) 1548
Bsp119I TTCGAA 1 cut(s) 658
Bsp1286I GDGCHC 1 cut(s) 1323
Bsp143I GATC 1 cut(s) 1232
BspACI CCGC 2 cut(s) 843, 1209
BspANI GGCC 5 cut(s) 191, 350, 1303, 1444, 1545
BspCNI CTCAG 6 cut(s) 186, 223, 622, 1309, 1512, 1543
BspFNI CGCG 1 cut(s) 1211
BspLI GGNNCC 6 cut(s) 6, 723, 988, 1254, 1407, 1437
BspMAI CTGCAG 1 cut(s) 571
BspPI GGATC 1 cut(s) 1240
BspT104I TTCGAA 1 cut(s) 658
BspT107I GGYRCC 1 cut(s) 1435
BsrDI GCAATG 1 cut(s) 1001
BsrFI RCCGGY 1 cut(s) 1011
BsrI ACTGG 6 cut(s) 28, 267, 887, 927, 1476, 1517
BssAI RCCGGY 1 cut(s) 1011
BssECI CCNNGG 6 cut(s) 444, 1102, 1168, 1248, 1439, 1547
BssMI GATC 1 cut(s) 1232
BssNI GRCGYC 3 cut(s) 1196, 1373, 1436
BssSI CACGAG 1 cut(s) 726
BssT1I CCWWGG 3 cut(s) 444, 1168, 1439
Bst2BI CACGAG 1 cut(s) 726
Bst2UI CCWGG 4 cut(s) 107, 1250, 1257, 1410
Bst4CI ACNGT 8 cut(s) 62, 181, 378, 622, 856, 947, 1103, 1401
BstACI GRCGYC 3 cut(s) 1196, 1373, 1436
BstBAI YACGTR 2 cut(s) 718, 1324
BstBI TTCGAA 1 cut(s) 658
BstC8I GCNNGC 1 cut(s) 352
BstDEI CTNAG 6 cut(s) 194, 231, 609, 1317, 1520, 1530
BstDSI CCRYGG 1 cut(s) 1102
BstF5I GGATG 5 cut(s) 393, 427, 793, 853, 1494
BstFNI CGCG 1 cut(s) 1211
BstH2I RGCGCY 2 cut(s) 955, 1439
BstHHI GCGC 2 cut(s) 954, 1438
BstKTI GATC 1 cut(s) 1235
BstMAI GTCTC 4 cut(s) 190, 308, 544, 954
BstMBI GATC 1 cut(s) 1232
BstMWI GCNNNNNNNGC 1 cut(s) 236
BstNI CCWGG 4 cut(s) 107, 1250, 1257, 1410
BstNSI RCATGY 1 cut(s) 1461
BstSCI CCNGG 4 cut(s) 105, 1248, 1255, 1408
BstSFI CTRYAG 1 cut(s) 567
BstUI CGCG 1 cut(s) 1211
BstV1I GCAGC 8 cut(s) 190, 248, 792, 795, 878, 1052, 1235, 1440
BstXI CCANNNNNNTGG 2 cut(s) 1175, 1256
BsuRI GGCC 5 cut(s) 191, 350, 1303, 1444, 1545
BtgI CCRYGG 1 cut(s) 1102
BtgZI GCGATG 1 cut(s) 522
BtsCI GGATG 5 cut(s) 393, 427, 793, 853, 1494
BtsI GCAGTG 1 cut(s) 1025
BtsIMutI CAGTG 6 cut(s) 383, 920, 952, 1025, 1483, 1510
Cac8I GCNNGC 1 cut(s) 352
CfoI GCGC 2 cut(s) 954, 1438
Cfr10I RCCGGY 1 cut(s) 1011
Cfr13I GGNCC 6 cut(s) 190, 884, 986, 1067, 1240, 1544
CseI GACGC 2 cut(s) 176, 1362
Csp6I GTAC 5 cut(s) 1054, 1079, 1206, 1337, 1343
CspAI ACCGGT 1 cut(s) 1011
CviQI GTAC 5 cut(s) 1054, 1079, 1206, 1337, 1343
DdeI CTNAG 6 cut(s) 194, 231, 609, 1317, 1520, 1530
DinI GGCGCC 1 cut(s) 1437
DpnI GATC 1 cut(s) 1234
DpnII GATC 1 cut(s) 1232
DraI TTTAAA 2 cut(s) 484, 981
EaeI YGGCCR 1 cut(s) 348
Eco130I CCWWGG 3 cut(s) 444, 1168, 1439
Eco32I GATATC 1 cut(s) 1110
Eco47I GGWCC 4 cut(s) 884, 986, 1067, 1240
Eco47III AGCGCT 1 cut(s) 953
Eco57I CTGAAG 2 cut(s) 228, 1083
Eco72I CACGTG 1 cut(s) 1324
Eco88I CYCGRG 1 cut(s) 1548
EcoO109I RGGNCCY 2 cut(s) 190, 986
EcoRI GAATTC 3 cut(s) 16, 660, 1260
EcoRII CCWGG 4 cut(s) 105, 1248, 1255, 1408
EcoRV GATATC 1 cut(s) 1110
EcoT14I CCWWGG 3 cut(s) 444, 1168, 1439
EcoT22I ATGCAT 1 cut(s) 1369
EgeI GGCGCC 1 cut(s) 1437
EheI GGCGCC 1 cut(s) 1437
ErhI CCWWGG 3 cut(s) 444, 1168, 1439
Esp3I CGTCTC 2 cut(s) 190, 544
FalI AAGNNNNNCTT 2 cut(s) 810, 842
FaqI GGGAC 2 cut(s) 972, 1433
FauI CCCGC 1 cut(s) 836
FblI GTMKAC 1 cut(s) 822
Fnu4HI GCNGC 8 cut(s) 204, 237, 806, 809, 867, 1041, 1224, 1429
FokI GGATG 5 cut(s) 400, 434, 800, 860, 1481
Fsp4HI GCNGC 8 cut(s) 204, 237, 806, 809, 867, 1041, 1224, 1429
GlaI GCGC 2 cut(s) 953, 1437
GluI GCNGC 8 cut(s) 204, 237, 806, 809, 867, 1041, 1224, 1429
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 3 cut(s) 101, 284, 1248
HaeII RGCGCY 2 cut(s) 955, 1439
HaeIII GGCC 5 cut(s) 191, 350, 1303, 1444, 1545
HapII CCGG 1 cut(s) 1012
HgaI GACGC 2 cut(s) 176, 1362
HhaI GCGC 2 cut(s) 954, 1438
Hin1I GRCGYC 3 cut(s) 1196, 1373, 1436
Hin6I GCGC 2 cut(s) 952, 1436
HinP1I GCGC 2 cut(s) 952, 1436
HinfI GANTC 8 cut(s) 271, 440, 605, 752, 934, 1469, 1516, 1528
HpaII CCGG 1 cut(s) 1012
HphI GGTGA 1 cut(s) 1424
Hpy166II GTNNAC 4 cut(s) 584, 823, 1243, 1283
Hpy188I TCNGA 6 cut(s) 94, 373, 439, 683, 1308, 1521
Hpy188III TCNNGA 4 cut(s) 419, 968, 1486, 1550
Hpy8I GTNNAC 4 cut(s) 584, 823, 1243, 1283
Hpy99I CGWCG 2 cut(s) 1198, 1378
HpyAV CCTTC 3 cut(s) 203, 778, 1058
HpyCH4III ACNGT 8 cut(s) 62, 181, 378, 622, 856, 947, 1103, 1401
HpyCH4IV ACGT 4 cut(s) 717, 1026, 1196, 1323
HpyF10VI GCNNNNNNNGC 1 cut(s) 236
HpyF3I CTNAG 6 cut(s) 194, 231, 609, 1317, 1520, 1530
HpySE526I ACGT 4 cut(s) 717, 1026, 1196, 1323
Hsp92I GRCGYC 3 cut(s) 1196, 1373, 1436
HspAI GCGC 2 cut(s) 952, 1436
KasI GGCGCC 1 cut(s) 1435
Kzo9I GATC 1 cut(s) 1232
LmnI GCTCC 3 cut(s) 10, 407, 1411
Lsp1109I GCAGC 8 cut(s) 190, 248, 792, 795, 878, 1052, 1235, 1440
LweI GCATC 4 cut(s) 485, 878, 1405, 1503
MaeII ACGT 4 cut(s) 717, 1026, 1196, 1323
MaeIII GTNAC 7 cut(s) 515, 918, 1090, 1142, 1156, 1324, 1478
MalI GATC 1 cut(s) 1234
MboI GATC 1 cut(s) 1232
MboII GAAGA 3 cut(s) 117, 407, 754
MfeI CAATTG 1 cut(s) 1095
MhlI GDGCHC 1 cut(s) 1323
MlsI TGGCCA 1 cut(s) 350
MluNI TGGCCA 1 cut(s) 350
Mly113I GGCGCC 1 cut(s) 1436
MlyI GAGTC 4 cut(s) 265, 761, 928, 1522
Mox20I TGGCCA 1 cut(s) 350
Mph1103I ATGCAT 1 cut(s) 1369
MroXI GAANNNNTTC 2 cut(s) 217, 414
MscI TGGCCA 1 cut(s) 350
MseI TTAA 6 cut(s) 86, 483, 707, 974, 980, 993
MslI CAYNNNNRTG 3 cut(s) 496, 528, 1423
Msp20I TGGCCA 1 cut(s) 350
MspA1I CMGCKG 2 cut(s) 239, 1226
MspI CCGG 1 cut(s) 1012
MspR9I CCNGG 4 cut(s) 107, 1250, 1257, 1410
MunI CAATTG 1 cut(s) 1095
MvaI CCWGG 4 cut(s) 107, 1250, 1257, 1410
MvnI CGCG 1 cut(s) 1211
MwoI GCNNNNNNNGC 1 cut(s) 236
NarI GGCGCC 1 cut(s) 1436
NdeII GATC 1 cut(s) 1232
NlaIV GGNNCC 6 cut(s) 6, 723, 988, 1254, 1407, 1437
NmuCI GTSAC 6 cut(s) 515, 918, 1142, 1156, 1324, 1478
NsiI ATGCAT 1 cut(s) 1369
NspI RCATGY 1 cut(s) 1461
NspV TTCGAA 1 cut(s) 658
OliI CACNNNNGTG 1 cut(s) 1423
PdmI GAANNNNTTC 2 cut(s) 217, 414
PfeI GAWTC 4 cut(s) 440, 605, 1469, 1516
PflFI GACNNNGTC 3 cut(s) 536, 827, 1531
PflMI CCANNNNNTGG 1 cut(s) 154
PfoI TCCNGGA 2 cut(s) 105, 1255
PinAI ACCGGT 1 cut(s) 1011
PkrI GCNGC 8 cut(s) 205, 238, 807, 810, 868, 1042, 1225, 1430
PleI GAGTC 4 cut(s) 265, 760, 928, 1522
PluTI GGCGCC 1 cut(s) 1439
PmaCI CACGTG 1 cut(s) 1324
PmlI CACGTG 1 cut(s) 1324
PpsI GAGTC 4 cut(s) 265, 760, 928, 1522
Ppu21I YACGTR 2 cut(s) 718, 1324
PpuMI RGGWCCY 1 cut(s) 986
Psp5II RGGWCCY 1 cut(s) 986
Psp6I CCWGG 4 cut(s) 105, 1248, 1255, 1408
PspCI CACGTG 1 cut(s) 1324
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 4 cut(s) 105, 1248, 1255, 1408
PspN4I GGNNCC 6 cut(s) 6, 723, 988, 1254, 1407, 1437
PspPI GGNCC 6 cut(s) 190, 884, 986, 1067, 1240, 1544
PspPPI RGGWCCY 1 cut(s) 986
PstI CTGCAG 1 cut(s) 571
PsyI GACNNNGTC 3 cut(s) 536, 827, 1531
PvuII CAGCTG 2 cut(s) 239, 1226
RsaI GTAC 5 cut(s) 1055, 1080, 1207, 1338, 1344
RsaNI GTAC 5 cut(s) 1054, 1079, 1206, 1337, 1343
RseI CAYNNNNRTG 3 cut(s) 496, 528, 1423
SaqAI TTAA 6 cut(s) 86, 483, 707, 974, 980, 993
SatI GCNGC 8 cut(s) 204, 237, 806, 809, 867, 1041, 1224, 1429
Sau3AI GATC 1 cut(s) 1232
Sau96I GGNCC 6 cut(s) 190, 884, 986, 1067, 1240, 1544
SchI GAGTC 4 cut(s) 265, 761, 928, 1522
ScrFI CCNGG 4 cut(s) 107, 1250, 1257, 1410
SduI GDGCHC 1 cut(s) 1323
SfaNI GCATC 4 cut(s) 485, 878, 1405, 1503
SfcI CTRYAG 1 cut(s) 567
SfoI GGCGCC 1 cut(s) 1437
SfuI TTCGAA 1 cut(s) 658
SinI GGWCC 4 cut(s) 884, 986, 1067, 1240
SmiMI CAYNNNNRTG 3 cut(s) 496, 528, 1423
SsiI CCGC 2 cut(s) 843, 1209
SspDI GGCGCC 1 cut(s) 1435
SspI AATATT 2 cut(s) 712, 1185
StyD4I CCNGG 4 cut(s) 105, 1248, 1255, 1408
StyI CCWWGG 3 cut(s) 444, 1168, 1439
TaaI ACNGT 8 cut(s) 62, 181, 378, 622, 856, 947, 1103, 1401
TaiI ACGT 4 cut(s) 720, 1029, 1199, 1326
TaqI TCGA 3 cut(s) 74, 658, 1539
TatI WGTACW 2 cut(s) 1078, 1336
TfiI GAWTC 4 cut(s) 440, 605, 1469, 1516
Tru1I TTAA 6 cut(s) 86, 483, 707, 974, 980, 993
Tru9I TTAA 6 cut(s) 86, 483, 707, 974, 980, 993
TscAI CASTG 6 cut(s) 383, 927, 952, 1025, 1483, 1517
TseFI GTSAC 6 cut(s) 515, 918, 1142, 1156, 1324, 1478
TseI GCWGC 8 cut(s) 203, 236, 805, 808, 866, 1040, 1223, 1428
Tsp45I GTSAC 6 cut(s) 515, 918, 1142, 1156, 1324, 1478
TspDTI ATGAA 6 cut(s) 30, 404, 423, 441, 480, 1206
TspGWI ACGGA 1 cut(s) 764
TspRI CASTG 6 cut(s) 383, 927, 952, 1025, 1483, 1517
Tth111I GACNNNGTC 3 cut(s) 536, 827, 1531
Van91I CCANNNNNTGG 1 cut(s) 154
VpaK11BI GGWCC 4 cut(s) 884, 986, 1067, 1240
XapI RAATTY 6 cut(s) 16, 461, 643, 660, 1126, 1260
XceI RCATGY 1 cut(s) 1461
XmiI GTMKAC 1 cut(s) 822
XmnI GAANNNNTTC 2 cut(s) 217, 414
ZraI GACGTC 1 cut(s) 1197
Zsp2I ATGCAT 1 cut(s) 1369
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.