RLG00000034795

NADH kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000832
Physical Location & Seq
Forward (+)
54692409 .. 54707181
14773 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034795

Sequence Viewer

Length: 1926 bp
ATGGCTCCCAGCAAGTCCAATTCTTCAGGTGATGCAAGTGTTTCATGCCCACAGCCAGAGAATGGTTGTCTCAATTCACTTTCCCTCTTAAGTTCAGAGAAGGCAGTCGAGGAACTTCTCGAGCAATCTCCACTTCAGGAAACAGATGACCACCTCATTGAGTTCTCAGAGGCTATGAGAACGGTTGCAAAGGCCCTGAGACGAGCTGCCGAAGGAAAGGCTTCTGCACAAGCTGAAGCAGCTGAATGGAAGCGCAAATATGAACTGGAGAGGGCGCGCAATCTGCATCTGGAACATAAAGGGCCATCACATAGAGAGAATAACGGGGATGATGAGAGGATAGAGAACTTGGCCAGGAGACCAAATGACCAATCTGAACAATGCTGTGGGAGTAATGGGATATGCTCTCATGAAGTTCTTCGGGATGGTGAATGTGATACTGATTCAAAATCGCTTCTCAATAAGTTTGCAAGAAAGGCGTCATTCAAACTTTCATGGTGCTGCAAAGGTGACCAGAGTGGCCAGCACAAGCATGACATTGTCTCTTTTGAAAGAGGAAACATAACAACTGCAGAGCGCAGCAGTAAACAGATTTCTTTGAAGTGGGAAACTCACCCACAGACTGTGCTTATATTGACCAAACCAAATTCAACTTCTGTTCGAATTCTGTGTGCAGAAATGGTCAGATGGTTGAGAGAGCAGAAAAAGGTAGATATTTATGTGGAGCCTCGTGTGAGAGTTGAACTTGTGACAGAGTCATCATACTACAACTTCGTCCAGACATGGAAAGAAGACACTGAGATTATGCTCCTGCATACAAAAGTTGACCTTGTGGTAACTCTTGGTGGGGATGGAACCGTCCTTTGGGCAGCATCCATGTTCAAAGGACCAGTTCCTCCTGTTGTGCCGTTTTCTTTAGGATCTCTGGGATTTATGACTCCATTTCACAGTGAACAGTACCAGTATTATCTTGATTCACTTTTAAAAGGCCCCATTAGTATCACATTACGGCACCGGTTGCAATGCCATGTTATTAGAGAAGCAGCTAAAAATGAGTACGAAACTGAAGGGCCAATACTTGTTTTAAATGAGGTTACAATTGACCGTGGGATATCATCATATCTCACAAATTTGGAATGCTATTGTGACAACTCTTTTGTCACATGCGTCCAAGGAGATGGGCTGATATTATCGACAACATCTGGCAGTACTGCATATTCATTAGCAGCTGGAGGATCAATGGTCCATCCCCAGGTTCCAGGCATCCTCTTTACCCCTATTTGTCCTCATTCCCTATCATTCCGGCCTCTGATATTACCTGAGTATGTGACATTGCGAGTACAAGTACCTTATAACAGCAGAAGCCATGCATGGGCATCATTTGATGGGAAGGACAGGAAACGGCTGGCAGCTGGTGATGCACTCATGTGCAAAGGGAATACAATGTGGGGGTTTGAGTGGGGTGGGAAGGTGAAAGCAAATTTAGAGATTCCTCCATCCAATAACGACGCCGGCGCATTTGTACTGGCAAACTCGTCTCTGGCGCCACCAACAACGACGCTGGCCCCAACTTCATGGTTCTCACCTTCGCCAATCCTTTCTGGATCGAAATCTGTCACCAAGGTTGGCGCTGCTCCTCGAAATCTCACCAGAGAAAGCGTTCGAAGAGAGATCGAGGTACACGCCGGTGATATTGAGAATCTGTGGACCTTGTGGTGGAGCTTGACCGGAAGGTCCCTCCAGAGGCCGGGCATCACAGATGGAGTTGACCGAGACAACGACCTCGACATCGTCGACGGATACTGCAATTACGGCGATCCTCTTCTTCTTGCTTCTCCTTCGCGTGGCAGCGGTGCTCGGAATTTGAAAGAGAATTCCGGCAGCTATCCAAACCTTCGTGCTTCCTCAGACTTAACGCAGCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00760 ko01100 map00760 map01100
Pfam Domains
Protein Families
NAD_kinase

Protein Analysis

642

Amino Acids

70.83

Weight (kDa)

6.1

Isoelectric Point (pI)

44.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_kinase PF01513 209 - 330 1.4e-18 ATP-NAD kinase N-terminal domain
NAD_kinase_C PF20143 362 - 474 8.4e-30 ATP-NAD kinase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21070 AT3G21070 AT3G21070 AT3G21070
fragaria_vesca FvH4_3g28510
malus_domestica MD03G1172500.v1.1 MD11G1190400.v1.1
prunus_persica Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1
pyrus_communis pycom03g12970 pycom11g16670
rosa_chinensis RchiOBHm_Chr5g0052801
rosa_laevigata RLG00000034795
rosa_multiflora Rmu_sc0004335.1_g000006 Rmu_sc0032421.1_g000001 Rmu_ssc0000311.1_g000025
rosa_roxburghii Rroxscaffold_1G00028620 Rroxscaffold_4G00318540
rosa_rugosa Rorug05G0269700 Rorug05G0269800
rosa_samantha Rh5AG341600 Rh5BG352300 Rh5CG379000 Rh5DG368700
rosa_wichuraiana Rw5G032210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1353
AasI GACNNNNNNGTC 1 cut(s) 1732
AccB1I GGYRCC 2 cut(s) 1011, 1543
AccB7I CCANNNNNTGG 1 cut(s) 62
AccI GTMKAC 1 cut(s) 1794
AccII CGCG 2 cut(s) 277, 1843
AciI CCGC 1 cut(s) 1851
AclWI GGATC 4 cut(s) 928, 1243, 1612, 1811
AcoI YGGCCR 2 cut(s) 351, 520
AcsI RAATTY 6 cut(s) 646, 663, 1129, 1480, 1861, 1873
AcuI CTGAAG 4 cut(s) 9, 119, 255, 1086
AcyI GRCGYC 3 cut(s) 479, 1509, 1544
AfaI GTAC 7 cut(s) 959, 1058, 1210, 1341, 1347, 1524, 1680
AfiI CCNNNNNNNGG 8 cut(s) 62, 864, 1252, 1372, 1716, 1743, 1747, 1844
AflII CTTAAG 1 cut(s) 88
AgeI ACCGGT 1 cut(s) 1014
AgsI TTSAA 8 cut(s) 447, 487, 551, 601, 651, 743, 883, 1867
AjnI CCWGG 3 cut(s) 353, 1251, 1258
AjuI GAANNNNNNNTTGG 4 cut(s) 637, 669, 847, 879
AleI CACNNNNGTG 2 cut(s) 1426, 1686
AluBI AGCT 9 cut(s) 206, 233, 242, 1046, 1229, 1412, 1722, 1884, 1921
AluI AGCT 9 cut(s) 206, 233, 242, 1046, 1229, 1412, 1722, 1884, 1921
Alw21I GWGCWC 1 cut(s) 1858
Alw26I GTCTC 6 cut(s) 74, 193, 352, 547, 1542, 1767
AlwI GGATC 4 cut(s) 928, 1243, 1612, 1811
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 9 cut(s) 192, 302, 351, 520, 988, 1070, 1304, 1563, 1745
ApoI RAATTY 6 cut(s) 646, 663, 1129, 1480, 1861, 1873
ArsI GACNNNNNNTTYG 2 cut(s) 1139, 1171
AsiGI ACCGGT 1 cut(s) 1014
Asp700I GAANNNNTTC 3 cut(s) 220, 417, 1659
AspLEI GCGC 7 cut(s) 255, 277, 279, 579, 1517, 1546, 1631
AspS9I GGNCC 9 cut(s) 193, 302, 887, 989, 1070, 1243, 1564, 1707, 1734
AsuC2I CCSGG 1 cut(s) 1749
AsuII TTCGAA 2 cut(s) 661, 1663
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 4 cut(s) 887, 1243, 1707, 1734
BalI TGGCCA 2 cut(s) 353, 522
BanI GGYRCC 2 cut(s) 1011, 1543
BarI GAAGNNNNNNTAC 2 cut(s) 1059, 1091
BauI CACGAG 1 cut(s) 729
BbsI GAAGAC 1 cut(s) 798
Bbv12I GWGCWC 1 cut(s) 1858
BccI CCATC 9 cut(s) 313, 419, 681, 845, 1172, 1254, 1379, 1504, 1754
BceAI ACGGC 4 cut(s) 892, 1025, 1418, 1828
BciT130I CCWGG 3 cut(s) 355, 1253, 1260
BciVI GTATCC 1 cut(s) 1793
BcnI CCSGG 1 cut(s) 1749
BcoDI GTCTC 6 cut(s) 74, 193, 352, 547, 1542, 1767
BfmI CTRYAG 1 cut(s) 570
BfoI RGCGCY 2 cut(s) 1547, 1632
BfrI CTTAAG 1 cut(s) 88
BfuI GTATCC 1 cut(s) 1793
BmcAI AGTACT 1 cut(s) 1210
Bme1390I CCNGG 4 cut(s) 355, 1253, 1260, 1749
Bme18I GGWCC 4 cut(s) 887, 1243, 1707, 1734
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 9 cut(s) 193, 302, 887, 989, 1070, 1243, 1564, 1707, 1734
BmiI GGNNCC 9 cut(s) 6, 726, 856, 991, 1013, 1257, 1545, 1566, 1736
BmrFI CCNGG 4 cut(s) 355, 1253, 1260, 1749
BmsI GCATC 7 cut(s) 22, 295, 881, 1272, 1385, 1408, 1761
BpiI GAAGAC 1 cut(s) 798
BpmI CTGGAG 3 cut(s) 287, 1251, 1724
Bpu14I TTCGAA 2 cut(s) 661, 1663
BpuMI CCSGG 1 cut(s) 1749
BsaBI GATNNNNATC 1 cut(s) 1609
BsaHI GRCGYC 3 cut(s) 479, 1509, 1544
BsaI GGTCTC 1 cut(s) 352
BsaJI CCNNGG 4 cut(s) 1105, 1171, 1251, 1620
BsaWI WCCGGW 2 cut(s) 1014, 1727
Bsc4I CCNNNNNNNGG 8 cut(s) 62, 864, 1252, 1372, 1716, 1743, 1747, 1844
Bse118I RCCGGY 3 cut(s) 1014, 1511, 1685
Bse1I ACTGG 4 cut(s) 270, 890, 961, 1530
Bse3DI GCAATG 2 cut(s) 1028, 1331
Bse8I GATNNNNATC 1 cut(s) 1609
BseBI CCWGG 3 cut(s) 355, 1253, 1260
BseDI CCNNGG 4 cut(s) 1105, 1171, 1251, 1620
BseGI GGATG 7 cut(s) 334, 430, 856, 872, 1246, 1263, 1496
BseJI GATNNNNATC 1 cut(s) 1609
BseLI CCNNNNNNNGG 8 cut(s) 62, 864, 1252, 1372, 1716, 1743, 1747, 1844
BseMI GCAATG 2 cut(s) 1028, 1331
BseMII CTCAG 5 cut(s) 180, 188, 789, 1311, 1920
BseNI ACTGG 4 cut(s) 270, 890, 961, 1530
BsePI GCGCGC 1 cut(s) 275
BseRI GAGGAG 1 cut(s) 1626
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 2 cut(s) 210, 693
Bsh1236I CGCG 2 cut(s) 277, 1843
BshFI GGCC 9 cut(s) 194, 304, 353, 522, 990, 1072, 1306, 1565, 1747
BshNI GGYRCC 2 cut(s) 1011, 1543
BshTI ACCGGT 1 cut(s) 1014
BsiHKAI GWGCWC 1 cut(s) 1858
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 7 cut(s) 1015, 1303, 1512, 1686, 1728, 1748, 1878
BslFI GGGAC 1 cut(s) 1720
BslI CCNNNNNNNGG 8 cut(s) 62, 864, 1252, 1372, 1716, 1743, 1747, 1844
BsmAI GTCTC 6 cut(s) 74, 193, 352, 547, 1542, 1767
BsmBI CGTCTC 2 cut(s) 193, 1542
BsmFI GGGAC 1 cut(s) 1720
BsmI GAATGC 1 cut(s) 1142
BsnI GGCC 9 cut(s) 194, 304, 353, 522, 990, 1072, 1306, 1565, 1747
Bso31I GGTCTC 1 cut(s) 352
BsoBI CYCGRG 1 cut(s) 119
Bsp119I TTCGAA 2 cut(s) 661, 1663
Bsp1286I GDGCHC 1 cut(s) 1858
Bsp143I GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
BspACI CCGC 1 cut(s) 1851
BspANI GGCC 9 cut(s) 194, 304, 353, 522, 990, 1072, 1306, 1565, 1747
BspCNI CTCAG 5 cut(s) 179, 189, 790, 1312, 1919
BspFNI CGCG 2 cut(s) 277, 1843
BspHI TCATGA 1 cut(s) 409
BspLI GGNNCC 9 cut(s) 6, 726, 856, 991, 1013, 1257, 1545, 1566, 1736
BspMAI CTGCAG 1 cut(s) 574
BspPI GGATC 4 cut(s) 928, 1243, 1612, 1811
BspT104I TTCGAA 2 cut(s) 661, 1663
BspT107I GGYRCC 2 cut(s) 1011, 1543
BspTI CTTAAG 1 cut(s) 88
BspTNI GGTCTC 1 cut(s) 352
BsrDI GCAATG 2 cut(s) 1028, 1331
BsrFI RCCGGY 3 cut(s) 1014, 1511, 1685
BsrI ACTGG 4 cut(s) 270, 890, 961, 1530
BssAI RCCGGY 3 cut(s) 1014, 1511, 1685
BssECI CCNNGG 4 cut(s) 1105, 1171, 1251, 1620
BssHII GCGCGC 1 cut(s) 275
BssMI GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
BssNI GRCGYC 3 cut(s) 479, 1509, 1544
BssSI CACGAG 1 cut(s) 729
BssT1I CCWWGG 2 cut(s) 1171, 1620
Bst2BI CACGAG 1 cut(s) 729
Bst2UI CCWGG 3 cut(s) 355, 1253, 1260
Bst4CI ACNGT 6 cut(s) 184, 625, 859, 950, 957, 1106
Bst6I CTCTTC 2 cut(s) 1660, 1827
BstACI GRCGYC 3 cut(s) 479, 1509, 1544
BstAFI CTTAAG 1 cut(s) 88
BstAPI GCANNNNNTGC 1 cut(s) 1018
BstBI TTCGAA 2 cut(s) 661, 1663
BstC8I GCNNGC 5 cut(s) 277, 524, 1407, 1513, 1563
BstDEI CTNAG 5 cut(s) 166, 197, 798, 1320, 1906
BstDSI CCRYGG 1 cut(s) 1105
BstEII GGTNACC 1 cut(s) 509
BstF5I GGATG 7 cut(s) 334, 430, 856, 872, 1246, 1263, 1496
BstFNI CGCG 2 cut(s) 277, 1843
BstH2I RGCGCY 2 cut(s) 1547, 1632
BstHHI GCGC 7 cut(s) 255, 277, 279, 579, 1517, 1546, 1631
BstKTI GATC 5 cut(s) 923, 1238, 1607, 1674, 1819
BstMAI GTCTC 6 cut(s) 74, 193, 352, 547, 1542, 1767
BstMBI GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
BstMWI GCNNNNNNNGC 6 cut(s) 239, 283, 476, 1018, 1418, 1812
BstNI CCWGG 3 cut(s) 355, 1253, 1260
BstNSI RCATGY 1 cut(s) 1167
BstPI GGTNACC 1 cut(s) 509
BstSCI CCNGG 4 cut(s) 353, 1251, 1258, 1747
BstSFI CTRYAG 1 cut(s) 570
BstUI CGCG 2 cut(s) 277, 1843
BstV2I GAAGAC 1 cut(s) 798
BstX2I RGATCY 1 cut(s) 920
BstXI CCANNNNNNTGG 2 cut(s) 1178, 1575
BstYI RGATCY 1 cut(s) 920
BsuI GTATCC 1 cut(s) 1793
BsuRI GGCC 9 cut(s) 194, 304, 353, 522, 990, 1072, 1306, 1565, 1747
BtgI CCRYGG 1 cut(s) 1105
BtsCI GGATG 7 cut(s) 334, 430, 856, 872, 1246, 1263, 1496
BtsIMutI CAGTG 2 cut(s) 795, 955
Cac8I GCNNGC 5 cut(s) 277, 524, 1407, 1513, 1563
CciI TCATGA 1 cut(s) 409
CfoI GCGC 7 cut(s) 255, 277, 279, 579, 1517, 1546, 1631
Cfr10I RCCGGY 3 cut(s) 1014, 1511, 1685
Cfr13I GGNCC 9 cut(s) 193, 302, 887, 989, 1070, 1243, 1564, 1707, 1734
CseI GACGC 4 cut(s) 468, 1156, 1517, 1567
Csp6I GTAC 7 cut(s) 958, 1057, 1209, 1340, 1346, 1523, 1679
CspAI ACCGGT 1 cut(s) 1014
CviQI GTAC 7 cut(s) 958, 1057, 1209, 1340, 1346, 1523, 1679
DdeI CTNAG 5 cut(s) 166, 197, 798, 1320, 1906
DinI GGCGCC 1 cut(s) 1545
DpnI GATC 5 cut(s) 922, 1237, 1606, 1673, 1818
DpnII GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
DraI TTTAAA 2 cut(s) 984, 1086
DrdI GACNNNNNNGTC 1 cut(s) 1732
DseDI GACNNNNNNGTC 1 cut(s) 1732
EaeI YGGCCR 2 cut(s) 351, 520
Eam1104I CTCTTC 2 cut(s) 1660, 1827
EarI CTCTTC 2 cut(s) 1660, 1827
Eco130I CCWWGG 2 cut(s) 1171, 1620
Eco31I GGTCTC 1 cut(s) 352
Eco32I GATATC 1 cut(s) 1113
Eco47I GGWCC 4 cut(s) 887, 1243, 1707, 1734
Eco57I CTGAAG 4 cut(s) 9, 119, 255, 1086
Eco88I CYCGRG 1 cut(s) 119
Eco91I GGTNACC 1 cut(s) 509
EcoO109I RGGNCCY 3 cut(s) 193, 989, 1734
EcoO65I GGTNACC 1 cut(s) 509
EcoRI GAATTC 2 cut(s) 663, 1873
EcoRII CCWGG 3 cut(s) 353, 1251, 1258
EcoRV GATATC 1 cut(s) 1113
EcoT14I CCWWGG 2 cut(s) 1171, 1620
EcoT22I ATGCAT 1 cut(s) 1372
EgeI GGCGCC 1 cut(s) 1545
EheI GGCGCC 1 cut(s) 1545
ErhI CCWWGG 2 cut(s) 1171, 1620
Esp3I CGTCTC 2 cut(s) 193, 1542
FalI AAGNNNNNCTT 2 cut(s) 813, 845
FaqI GGGAC 1 cut(s) 1720
FblI GTMKAC 1 cut(s) 1794
FokI GGATG 7 cut(s) 341, 437, 859, 863, 1233, 1250, 1483
GlaI GCGC 7 cut(s) 254, 276, 278, 578, 1516, 1545, 1630
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 3 cut(s) 287, 1251, 1724
HaeII RGCGCY 2 cut(s) 1547, 1632
HaeIII GGCC 9 cut(s) 194, 304, 353, 522, 990, 1072, 1306, 1565, 1747
HapII CCGG 7 cut(s) 1015, 1303, 1512, 1686, 1728, 1748, 1878
HgaI GACGC 4 cut(s) 468, 1156, 1517, 1567
HhaI GCGC 7 cut(s) 255, 277, 279, 579, 1517, 1546, 1631
Hin1I GRCGYC 3 cut(s) 479, 1509, 1544
Hin6I GCGC 7 cut(s) 253, 275, 277, 577, 1515, 1544, 1629
HinP1I GCGC 7 cut(s) 253, 275, 277, 577, 1515, 1544, 1629
HincII GTYRAC 3 cut(s) 826, 1768, 1795
HindII GTYRAC 3 cut(s) 826, 1768, 1795
HinfI GANTC 6 cut(s) 443, 755, 937, 974, 1489, 1699
HpaII CCGG 7 cut(s) 1015, 1303, 1512, 1686, 1728, 1748, 1878
Hpy166II GTNNAC 7 cut(s) 587, 826, 953, 1681, 1707, 1768, 1795
Hpy188I TCNGA 7 cut(s) 97, 169, 376, 686, 1311, 1860, 1909
Hpy188III TCNNGA 9 cut(s) 119, 137, 290, 410, 422, 778, 971, 1602, 1741
Hpy8I GTNNAC 7 cut(s) 587, 826, 953, 1681, 1707, 1768, 1795
Hpy99I CGWCG 4 cut(s) 1511, 1561, 1796, 1799
HpyAV CCTTC 9 cut(s) 94, 206, 1061, 1384, 1462, 1596, 1725, 1848, 1904
HpyCH4III ACNGT 6 cut(s) 184, 625, 859, 950, 957, 1106
HpyF10VI GCNNNNNNNGC 6 cut(s) 239, 283, 476, 1018, 1418, 1812
HpyF3I CTNAG 5 cut(s) 166, 197, 798, 1320, 1906
Hsp92I GRCGYC 3 cut(s) 479, 1509, 1544
HspAI GCGC 7 cut(s) 253, 275, 277, 577, 1515, 1544, 1629
KasI GGCGCC 1 cut(s) 1543
KroI GCCGGC 1 cut(s) 1511
KroNI GCCGGC 1 cut(s) 1513
Kzo9I GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
LmnI GCTCC 5 cut(s) 10, 724, 813, 1639, 1719
LweI GCATC 7 cut(s) 22, 295, 881, 1272, 1385, 1408, 1761
MaeIII GTNAC 8 cut(s) 509, 748, 835, 1093, 1145, 1159, 1327, 1615
MalI GATC 5 cut(s) 922, 1237, 1606, 1673, 1818
MboI GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
MboII GAAGA 6 cut(s) 15, 410, 803, 1677, 1814, 1817
MfeI CAATTG 1 cut(s) 1098
MflI RGATCY 1 cut(s) 920
MhlI GDGCHC 1 cut(s) 1858
MlsI TGGCCA 2 cut(s) 353, 522
MluNI TGGCCA 2 cut(s) 353, 522
Mly113I GGCGCC 1 cut(s) 1544
MlyI GAGTC 2 cut(s) 764, 931
Mox20I TGGCCA 2 cut(s) 353, 522
Mph1103I ATGCAT 1 cut(s) 1372
MreI CGCCGGCG 1 cut(s) 1511
MroNI GCCGGC 1 cut(s) 1511
MroXI GAANNNNTTC 3 cut(s) 220, 417, 1659
MscI TGGCCA 2 cut(s) 353, 522
MseI TTAA 4 cut(s) 89, 983, 1085, 1913
MslI CAYNNNNRTG 3 cut(s) 531, 1426, 1686
Msp20I TGGCCA 2 cut(s) 353, 522
MspA1I CMGCKG 4 cut(s) 242, 1229, 1412, 1851
MspCI CTTAAG 1 cut(s) 88
MspI CCGG 7 cut(s) 1015, 1303, 1512, 1686, 1728, 1748, 1878
MspR9I CCNGG 4 cut(s) 355, 1253, 1260, 1749
MunI CAATTG 1 cut(s) 1098
Mva1269I GAATGC 1 cut(s) 1142
MvaI CCWGG 3 cut(s) 355, 1253, 1260
MvnI CGCG 2 cut(s) 277, 1843
MwoI GCNNNNNNNGC 6 cut(s) 239, 283, 476, 1018, 1418, 1812
NaeI GCCGGC 1 cut(s) 1513
NarI GGCGCC 1 cut(s) 1544
NciI CCSGG 1 cut(s) 1749
NdeII GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
NgoMIV GCCGGC 1 cut(s) 1511
NlaIV GGNNCC 9 cut(s) 6, 726, 856, 991, 1013, 1257, 1545, 1566, 1736
NmuCI GTSAC 6 cut(s) 509, 748, 1145, 1159, 1327, 1615
NsiI ATGCAT 1 cut(s) 1372
NspI RCATGY 1 cut(s) 1167
NspV TTCGAA 2 cut(s) 661, 1663
OliI CACNNNNGTG 2 cut(s) 1426, 1686
PaeR7I CTCGAG 1 cut(s) 119
PagI TCATGA 1 cut(s) 409
PauI GCGCGC 1 cut(s) 275
PcsI WCGNNNNNNNCGW 1 cut(s) 1791
PctI GAATGC 1 cut(s) 1142
PdiI GCCGGC 1 cut(s) 1513
PdmI GAANNNNTTC 3 cut(s) 220, 417, 1659
PfeI GAWTC 4 cut(s) 443, 974, 1489, 1699
PflFI GACNNNGTC 3 cut(s) 539, 754, 1790
PflMI CCANNNNNTGG 1 cut(s) 62
PinAI ACCGGT 1 cut(s) 1014
PleI GAGTC 2 cut(s) 763, 931
PluTI GGCGCC 1 cut(s) 1547
PpsI GAGTC 2 cut(s) 763, 931
PpuMI RGGWCCY 1 cut(s) 1734
PsiI TTATAA 1 cut(s) 1353
Psp5II RGGWCCY 1 cut(s) 1734
Psp6I CCWGG 3 cut(s) 353, 1251, 1258
PspEI GGTNACC 1 cut(s) 509
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 3 cut(s) 353, 1251, 1258
PspN4I GGNNCC 9 cut(s) 6, 726, 856, 991, 1013, 1257, 1545, 1566, 1736
PspPI GGNCC 9 cut(s) 193, 302, 887, 989, 1070, 1243, 1564, 1707, 1734
PspPPI RGGWCCY 1 cut(s) 1734
PstI CTGCAG 1 cut(s) 574
PsuI RGATCY 1 cut(s) 920
PsyI GACNNNGTC 3 cut(s) 539, 754, 1790
PteI GCGCGC 1 cut(s) 275
PvuII CAGCTG 3 cut(s) 242, 1229, 1412
RsaI GTAC 7 cut(s) 959, 1058, 1210, 1341, 1347, 1524, 1680
RsaNI GTAC 7 cut(s) 958, 1057, 1209, 1340, 1346, 1523, 1679
RseI CAYNNNNRTG 3 cut(s) 531, 1426, 1686
SalI GTCGAC 1 cut(s) 1793
SaqAI TTAA 4 cut(s) 89, 983, 1085, 1913
Sau3AI GATC 5 cut(s) 920, 1235, 1604, 1671, 1816
Sau96I GGNCC 9 cut(s) 193, 302, 887, 989, 1070, 1243, 1564, 1707, 1734
ScaI AGTACT 1 cut(s) 1210
SchI GAGTC 2 cut(s) 764, 931
ScrFI CCNGG 4 cut(s) 355, 1253, 1260, 1749
SduI GDGCHC 1 cut(s) 1858
SfaNI GCATC 7 cut(s) 22, 295, 881, 1272, 1385, 1408, 1761
SfcI CTRYAG 1 cut(s) 570
SfoI GGCGCC 1 cut(s) 1545
Sfr274I CTCGAG 1 cut(s) 119
SfuI TTCGAA 2 cut(s) 661, 1663
SgrAI CRCCGGYG 2 cut(s) 1511, 1685
SgrDI CGTCGACG 1 cut(s) 1793
SinI GGWCC 4 cut(s) 887, 1243, 1707, 1734
SlaI CTCGAG 1 cut(s) 119
SmiMI CAYNNNNRTG 3 cut(s) 531, 1426, 1686
SmlI CTYRAG 2 cut(s) 88, 119
SmoI CTYRAG 2 cut(s) 88, 119
SsiI CCGC 1 cut(s) 1851
SspDI GGCGCC 1 cut(s) 1543
StyD4I CCNGG 4 cut(s) 353, 1251, 1258, 1747
StyI CCWWGG 2 cut(s) 1171, 1620
TaaI ACNGT 6 cut(s) 184, 625, 859, 950, 957, 1106
TaqII GACCGA 1 cut(s) 1785
TatI WGTACW 3 cut(s) 1208, 1339, 1522
TfiI GAWTC 4 cut(s) 443, 974, 1489, 1699
Tru1I TTAA 4 cut(s) 89, 983, 1085, 1913
Tru9I TTAA 4 cut(s) 89, 983, 1085, 1913
TscAI CASTG 2 cut(s) 802, 955
TseFI GTSAC 6 cut(s) 509, 748, 1145, 1159, 1327, 1615
Tsp45I GTSAC 6 cut(s) 509, 748, 1145, 1159, 1327, 1615
TspDTI ATGAA 6 cut(s) 33, 276, 426, 483, 1209, 1563
TspGWI ACGGA 1 cut(s) 1812
TspRI CASTG 2 cut(s) 802, 955
Tth111I GACNNNGTC 3 cut(s) 539, 754, 1790
Van91I CCANNNNNTGG 1 cut(s) 62
Vha464I CTTAAG 1 cut(s) 88
VpaK11BI GGWCC 4 cut(s) 887, 1243, 1707, 1734
XapI RAATTY 6 cut(s) 646, 663, 1129, 1480, 1861, 1873
XceI RCATGY 1 cut(s) 1167
XhoI CTCGAG 1 cut(s) 119
XmiI GTMKAC 1 cut(s) 1794
XmnI GAANNNNTTC 3 cut(s) 220, 417, 1659
ZrmI AGTACT 1 cut(s) 1210
Zsp2I ATGCAT 1 cut(s) 1372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.