Rh5CG379000

NADH kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000832
Physical Location & Seq
Forward (+)
49422673 .. 49432965
10293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG379000.1

Sequence Viewer

Length: 1608 bp
ATGGCTCCCAGCAAGTCCAATTCTTCAGGTGATGCAAGTGTTTCATGGCCACAACCAGAGAATGGTTGTCTCAATTCAGTTTCCCTCTTAAGTTCAGAGAAGGCAGTCGAGGAACTTCTCGAGCAATCTCCACTTCAGGAAACAGATGACAACCTCATAGAGTTCTCAGAGGCTATGAGAACGGTTGCAAAGGCCCTGAGACGAGCTGCCGAAGGAAAGGCTTCTGCACAAGCTGAAGCAGCTGAATGGAAGCGCAAATATGAACTGGAGAGGGCGCGCAATCTGCATCTGGAACCTAAAGGGCCATCACATAGAGAGAATAACAGGGATGTTGAGAGGATAGAGAACTTGGCCAGGAGATCAAATGACCAATCTGAACAATGTTGTGGGAGTAATGGGATATGCTCTCATGAAGTTCTTCGAGATGGTGAATGTGATACTGATTCAAAATCTCGTGAAGTTCTTCGAGATGGTGAATGTGATACTGATTCAAAATTGCTTCTCTATAAGTTTGCAAGAAAGGCATCATTCAAACTTTCATGGTGCTGCAAAGGTGACCAGAGTGACCAGCACAAGCATGACATTGTCTCTTTTGAAAGAGGAAACATAACAACTGCAGAGCGCAGCAGTAAACAGATTTCTTTGAAGTGGGAAACTCACCCACGGACTGTGCTTATATTGACCAAACCAAATTCAACTTCTGTTCGAATTCTGTGTGCAGAAATGGTCAGATGGTTGAGAGAGCAGAAAAAGTTAGATATTTATGTGGAGCCACGTGTGAGAGTTGAACTTGTGACAGAGTCATCATACTACAACTTCGTCCAGACATGGAAAGAAGACACTGAGATTATGCTCCTGCATACAAAAGTTGACCTTGTGGTAACTCTTGGTGGGGATGGAACTGTCCTCTGGGCAGCATCCATGTTCAAAGGACCAGTTCCTCCTGTTGTGCCGTTTTCTTTAGGATCTCTGGGATTTATGACTCCTTTTCACAGTGAACAGTACCAGGATTATCTTGATTCACTTTTAAAAGGTCCCATTAGTATCACGCTACGGCACCGGTTACAGTGCCATGTTATTAGAGAAGCAGCTAAAAATGAGTACGAAACTGAAGGGCCAATACTTGTTTTAAATGAGGTTACAATTGACCGTGGGATATCATCATATCTCACAAATTTGGAATGCTATTGTGACAACTCTTTTGTCACATGCGTCCAAGGAGATGGGCTGATATTATCGACAACATCTGGCAGTACTGCGTATTCATTAGCAGCTGGAGGATCAATGGTCCATCCCCAGGTTCCAGGCATCCTCTTTACCCCTATTTGTCCTCATTCCCTATCGTTCAGGCCTCTGATATTACCTGAGTATGTGACATTGCGAGTACAAGTACCTTTTAACAGCAGAAGCCATGCATGGGCATCATTTGATGGGAAGGACAGGAAACGACTGGCAGCTGGTGATGCACTCGTGTGCAGTATGGCTACTTGGCCCGTCCCCACTGCATGTCAAGTTGATTCAACTAGTGATTTCTTAACTAGCATTCATGATGGCCTGCACTGGAATCTGAGAAAGACTCAATCTCATGATGGCCCAAGGGATATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00760 ko01100 map00760 map01100
Pfam Domains
Protein Families
NAD_kinase

Protein Analysis

535

Amino Acids

59.85

Weight (kDa)

5.93

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_kinase PF01513 224 - 345 6.6e-19 ATP-NAD kinase N-terminal domain
NAD_kinase_C PF20143 377 - 492 3.4e-30 ATP-NAD kinase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000832)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21070 AT3G21070 AT3G21070 AT3G21070
fragaria_vesca FvH4_3g28510
malus_domestica MD03G1172500.v1.1 MD11G1190400.v1.1
prunus_persica Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1 Prupe.4G254100_v2.0.a1
pyrus_communis pycom03g12970 pycom11g16670
rosa_chinensis RchiOBHm_Chr5g0052801
rosa_laevigata RLG00000034795
rosa_multiflora Rmu_sc0004335.1_g000006 Rmu_sc0032421.1_g000001 Rmu_ssc0000311.1_g000025
rosa_roxburghii Rroxscaffold_1G00028620 Rroxscaffold_4G00318540
rosa_rugosa Rorug05G0269700 Rorug05G0269800
rosa_samantha Rh5AG341600 Rh5BG352300 Rh5CG379000 Rh5DG368700
rosa_wichuraiana Rw5G032210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1056
AccB7I CCANNNNNTGG 1 cut(s) 62
AccII CGCG 1 cut(s) 277
AclWI GGATC 2 cut(s) 973, 1288
AcoI YGGCCR 2 cut(s) 47, 351
AcsI RAATTY 3 cut(s) 691, 708, 1174
AcuI CTGAAG 4 cut(s) 9, 119, 255, 1131
AcvI CACGTG 1 cut(s) 776
AfaI GTAC 5 cut(s) 1004, 1103, 1255, 1386, 1392
AfiI CCNNNNNNNGG 3 cut(s) 62, 1297, 1417
AflII CTTAAG 1 cut(s) 88
AflIII ACRYGT 1 cut(s) 775
AgeI ACCGGT 1 cut(s) 1059
AgsI TTSAA 9 cut(s) 447, 492, 532, 596, 646, 696, 788, 928, 1521
AhlI ACTAGT 1 cut(s) 1523
AjnI CCWGG 4 cut(s) 353, 1005, 1296, 1303
AjuI GAANNNNNNNTTGG 2 cut(s) 682, 714
AleI CACNNNNGTG 1 cut(s) 1471
AluBI AGCT 6 cut(s) 206, 233, 242, 1091, 1274, 1457
AluI AGCT 6 cut(s) 206, 233, 242, 1091, 1274, 1457
Alw26I GTCTC 3 cut(s) 74, 193, 592
AlwI GGATC 2 cut(s) 973, 1288
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 9 cut(s) 47, 192, 302, 351, 1115, 1349, 1490, 1552, 1591
ApeKI GCWGC 8 cut(s) 206, 239, 546, 624, 914, 1088, 1271, 1454
ApoI RAATTY 3 cut(s) 691, 708, 1174
ArsI GACNNNNNNTTYG 2 cut(s) 1184, 1216
AsiGI ACCGGT 1 cut(s) 1059
Asp700I GAANNNNTTC 3 cut(s) 220, 417, 462
AspLEI GCGC 4 cut(s) 255, 277, 279, 624
AspS9I GGNCC 8 cut(s) 193, 302, 932, 1034, 1115, 1288, 1491, 1592
AsuHPI GGTGA 6 cut(s) 41, 440, 485, 566, 650, 1472
AsuII TTCGAA 1 cut(s) 706
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 3 cut(s) 932, 1034, 1288
BalI TGGCCA 2 cut(s) 49, 353
BanI GGYRCC 1 cut(s) 1056
BarI GAAGNNNNNNTAC 2 cut(s) 1104, 1136
BauI CACGAG 2 cut(s) 453, 1469
BbrPI CACGTG 1 cut(s) 776
BbsI GAAGAC 1 cut(s) 843
BbvI GCAGC 8 cut(s) 193, 251, 533, 636, 926, 1100, 1283, 1466
BceAI ACGGC 2 cut(s) 937, 1070
BciT130I CCWGG 4 cut(s) 355, 1007, 1298, 1305
BcoDI GTCTC 3 cut(s) 74, 193, 592
BcuI ACTAGT 1 cut(s) 1523
BfaI CTAG 2 cut(s) 1524, 1539
BfmI CTRYAG 1 cut(s) 615
BfrI CTTAAG 1 cut(s) 88
BisI GCNGC 8 cut(s) 207, 240, 547, 625, 915, 1089, 1272, 1455
BlsI GCNGC 8 cut(s) 208, 241, 548, 626, 916, 1090, 1273, 1456
BmcAI AGTACT 1 cut(s) 1255
Bme1390I CCNGG 4 cut(s) 355, 1007, 1298, 1305
Bme18I GGWCC 3 cut(s) 932, 1034, 1288
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 8 cut(s) 193, 302, 932, 1034, 1115, 1288, 1491, 1592
BmiI GGNNCC 6 cut(s) 6, 294, 771, 1036, 1058, 1302
BmrFI CCNGG 4 cut(s) 355, 1007, 1298, 1305
BmsI GCATC 7 cut(s) 22, 295, 533, 926, 1317, 1430, 1453
BpiI GAAGAC 1 cut(s) 843
BplI GAGNNNNNCTC 2 cut(s) 1561, 1593
BpmI CTGGAG 2 cut(s) 287, 1296
Bpu14I TTCGAA 1 cut(s) 706
BsaAI YACGTR 1 cut(s) 776
BsaJI CCNNGG 5 cut(s) 662, 1150, 1216, 1296, 1595
BsaWI WCCGGW 1 cut(s) 1059
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 1297, 1417
Bse118I RCCGGY 1 cut(s) 1059
Bse1I ACTGG 4 cut(s) 270, 935, 1455, 1565
Bse3DI GCAATG 1 cut(s) 1376
BseBI CCWGG 4 cut(s) 355, 1007, 1298, 1305
BseDI CCNNGG 5 cut(s) 662, 1150, 1216, 1296, 1595
BseGI GGATG 5 cut(s) 334, 901, 917, 1291, 1308
BseLI CCNNNNNNNGG 3 cut(s) 62, 1297, 1417
BseMI GCAATG 1 cut(s) 1376
BseMII CTCAG 5 cut(s) 180, 188, 834, 1356, 1559
BseNI ACTGG 4 cut(s) 270, 935, 1455, 1565
BsePI GCGCGC 1 cut(s) 275
BseXI GCAGC 8 cut(s) 193, 251, 533, 636, 926, 1100, 1283, 1466
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 4 cut(s) 210, 738, 1495, 1541
Bsh1236I CGCG 1 cut(s) 277
BshFI GGCC 9 cut(s) 49, 194, 304, 353, 1117, 1351, 1492, 1554, 1593
BshNI GGYRCC 1 cut(s) 1056
BshTI ACCGGT 1 cut(s) 1059
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 1 cut(s) 1060
BslFI GGGAC 2 cut(s) 1020, 1481
BslI CCNNNNNNNGG 3 cut(s) 62, 1297, 1417
BsmAI GTCTC 3 cut(s) 74, 193, 592
BsmBI CGTCTC 1 cut(s) 193
BsmFI GGGAC 2 cut(s) 1020, 1481
BsmI GAATGC 2 cut(s) 1187, 1542
BsnI GGCC 9 cut(s) 49, 194, 304, 353, 1117, 1351, 1492, 1554, 1593
BsoBI CYCGRG 1 cut(s) 119
Bsp119I TTCGAA 1 cut(s) 706
Bsp143I GATC 3 cut(s) 359, 965, 1280
BspANI GGCC 9 cut(s) 49, 194, 304, 353, 1117, 1351, 1492, 1554, 1593
BspCNI CTCAG 5 cut(s) 179, 189, 835, 1357, 1560
BspFNI CGCG 1 cut(s) 277
BspHI TCATGA 3 cut(s) 409, 1546, 1585
BspLI GGNNCC 6 cut(s) 6, 294, 771, 1036, 1058, 1302
BspMAI CTGCAG 1 cut(s) 619
BspPI GGATC 2 cut(s) 973, 1288
BspT104I TTCGAA 1 cut(s) 706
BspT107I GGYRCC 1 cut(s) 1056
BspTI CTTAAG 1 cut(s) 88
BsrDI GCAATG 1 cut(s) 1376
BsrFI RCCGGY 1 cut(s) 1059
BsrI ACTGG 4 cut(s) 270, 935, 1455, 1565
BssAI RCCGGY 1 cut(s) 1059
BssECI CCNNGG 5 cut(s) 662, 1150, 1216, 1296, 1595
BssHII GCGCGC 1 cut(s) 275
BssMI GATC 3 cut(s) 359, 965, 1280
BssSI CACGAG 2 cut(s) 453, 1469
BssT1I CCWWGG 2 cut(s) 1216, 1595
Bst2BI CACGAG 2 cut(s) 453, 1469
Bst2UI CCWGG 4 cut(s) 355, 1007, 1298, 1305
Bst4CI ACNGT 7 cut(s) 184, 670, 904, 995, 1002, 1068, 1151
BstAFI CTTAAG 1 cut(s) 88
BstBAI YACGTR 1 cut(s) 776
BstBI TTCGAA 1 cut(s) 706
BstC8I GCNNGC 2 cut(s) 277, 1556
BstDEI CTNAG 5 cut(s) 166, 197, 843, 1365, 1568
BstDSI CCRYGG 2 cut(s) 662, 1150
BstEII GGTNACC 1 cut(s) 554
BstF5I GGATG 5 cut(s) 334, 901, 917, 1291, 1308
BstFNI CGCG 1 cut(s) 277
BstHHI GCGC 4 cut(s) 255, 277, 279, 624
BstKTI GATC 3 cut(s) 362, 968, 1283
BstMAI GTCTC 3 cut(s) 74, 193, 592
BstMBI GATC 3 cut(s) 359, 965, 1280
BstMWI GCNNNNNNNGC 4 cut(s) 239, 283, 521, 1463
BstNI CCWGG 4 cut(s) 355, 1007, 1298, 1305
BstNSI RCATGY 2 cut(s) 1212, 1509
BstPI GGTNACC 1 cut(s) 554
BstSCI CCNGG 4 cut(s) 353, 1005, 1296, 1303
BstSFI CTRYAG 1 cut(s) 615
BstUI CGCG 1 cut(s) 277
BstV1I GCAGC 8 cut(s) 193, 251, 533, 636, 926, 1100, 1283, 1466
BstV2I GAAGAC 1 cut(s) 843
BstX2I RGATCY 1 cut(s) 965
BstXI CCANNNNNNTGG 1 cut(s) 1223
BstYI RGATCY 1 cut(s) 965
BsuRI GGCC 9 cut(s) 49, 194, 304, 353, 1117, 1351, 1492, 1554, 1593
BtgI CCRYGG 2 cut(s) 662, 1150
BtsCI GGATG 5 cut(s) 334, 901, 917, 1291, 1308
BtsI GCAGTG 1 cut(s) 1500
BtsIMutI CAGTG 5 cut(s) 840, 1000, 1073, 1500, 1558
Cac8I GCNNGC 2 cut(s) 277, 1556
CciI TCATGA 3 cut(s) 409, 1546, 1585
CfoI GCGC 4 cut(s) 255, 277, 279, 624
Cfr10I RCCGGY 1 cut(s) 1059
Cfr13I GGNCC 8 cut(s) 193, 302, 932, 1034, 1115, 1288, 1491, 1592
CseI GACGC 1 cut(s) 1201
Csp6I GTAC 5 cut(s) 1003, 1102, 1254, 1385, 1391
CspAI ACCGGT 1 cut(s) 1059
CviQI GTAC 5 cut(s) 1003, 1102, 1254, 1385, 1391
DdeI CTNAG 5 cut(s) 166, 197, 843, 1365, 1568
DpnI GATC 3 cut(s) 361, 967, 1282
DpnII GATC 3 cut(s) 359, 965, 1280
DraI TTTAAA 2 cut(s) 1029, 1131
EaeI YGGCCR 2 cut(s) 47, 351
Eco130I CCWWGG 2 cut(s) 1216, 1595
Eco147I AGGCCT 1 cut(s) 1351
Eco32I GATATC 1 cut(s) 1158
Eco47I GGWCC 3 cut(s) 932, 1034, 1288
Eco57I CTGAAG 4 cut(s) 9, 119, 255, 1131
Eco72I CACGTG 1 cut(s) 776
Eco88I CYCGRG 1 cut(s) 119
Eco91I GGTNACC 1 cut(s) 554
EcoO109I RGGNCCY 2 cut(s) 193, 1034
EcoO65I GGTNACC 1 cut(s) 554
EcoRI GAATTC 1 cut(s) 708
EcoRII CCWGG 4 cut(s) 353, 1005, 1296, 1303
EcoRV GATATC 1 cut(s) 1158
EcoT14I CCWWGG 2 cut(s) 1216, 1595
EcoT22I ATGCAT 1 cut(s) 1417
ErhI CCWWGG 2 cut(s) 1216, 1595
Esp3I CGTCTC 1 cut(s) 193
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 2 cut(s) 1020, 1481
Fnu4HI GCNGC 8 cut(s) 207, 240, 547, 625, 915, 1089, 1272, 1455
FokI GGATG 5 cut(s) 341, 904, 908, 1278, 1295
Fsp4HI GCNGC 8 cut(s) 207, 240, 547, 625, 915, 1089, 1272, 1455
FspBI CTAG 2 cut(s) 1524, 1539
GlaI GCGC 4 cut(s) 254, 276, 278, 623
GluI GCNGC 8 cut(s) 207, 240, 547, 625, 915, 1089, 1272, 1455
GsaI CCCAGC 1 cut(s) 12
GsuI CTGGAG 2 cut(s) 287, 1296
HaeIII GGCC 9 cut(s) 49, 194, 304, 353, 1117, 1351, 1492, 1554, 1593
HapII CCGG 1 cut(s) 1060
HgaI GACGC 1 cut(s) 1201
HhaI GCGC 4 cut(s) 255, 277, 279, 624
Hin6I GCGC 4 cut(s) 253, 275, 277, 622
HinP1I GCGC 4 cut(s) 253, 275, 277, 622
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HinfI GANTC 8 cut(s) 443, 488, 800, 982, 1019, 1517, 1564, 1576
HpaII CCGG 1 cut(s) 1060
HphI GGTGA 6 cut(s) 41, 440, 485, 566, 650, 1472
Hpy166II GTNNAC 3 cut(s) 632, 871, 998
Hpy188I TCNGA 6 cut(s) 97, 169, 376, 731, 1356, 1569
Hpy8I GTNNAC 3 cut(s) 632, 871, 998
HpyAV CCTTC 4 cut(s) 94, 206, 1106, 1429
HpyCH4III ACNGT 7 cut(s) 184, 670, 904, 995, 1002, 1068, 1151
HpyCH4IV ACGT 1 cut(s) 775
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 283, 521, 1463
HpyF3I CTNAG 5 cut(s) 166, 197, 843, 1365, 1568
HpySE526I ACGT 1 cut(s) 775
HspAI GCGC 4 cut(s) 253, 275, 277, 622
Kzo9I GATC 3 cut(s) 359, 965, 1280
LmnI GCTCC 3 cut(s) 10, 769, 858
Lsp1109I GCAGC 8 cut(s) 193, 251, 533, 636, 926, 1100, 1283, 1466
LweI GCATC 7 cut(s) 22, 295, 533, 926, 1317, 1430, 1453
MaeI CTAG 2 cut(s) 1524, 1539
MaeII ACGT 1 cut(s) 775
MaeIII GTNAC 9 cut(s) 554, 563, 793, 880, 1062, 1138, 1190, 1204, 1372
MalI GATC 3 cut(s) 361, 967, 1282
MboI GATC 3 cut(s) 359, 965, 1280
MboII GAAGA 4 cut(s) 15, 410, 455, 848
MfeI CAATTG 1 cut(s) 1143
MflI RGATCY 1 cut(s) 965
MlsI TGGCCA 2 cut(s) 49, 353
MluCI AATT 7 cut(s) 19, 73, 494, 691, 708, 1143, 1174
MluNI TGGCCA 2 cut(s) 49, 353
MlyI GAGTC 3 cut(s) 809, 976, 1570
Mox20I TGGCCA 2 cut(s) 49, 353
Mph1103I ATGCAT 1 cut(s) 1417
MroXI GAANNNNTTC 3 cut(s) 220, 417, 462
MscI TGGCCA 2 cut(s) 49, 353
MseI TTAA 5 cut(s) 89, 1028, 1130, 1398, 1535
MslI CAYNNNNRTG 2 cut(s) 576, 1471
Msp20I TGGCCA 2 cut(s) 49, 353
MspA1I CMGCKG 3 cut(s) 242, 1274, 1457
MspCI CTTAAG 1 cut(s) 88
MspI CCGG 1 cut(s) 1060
MspR9I CCNGG 4 cut(s) 355, 1007, 1298, 1305
MunI CAATTG 1 cut(s) 1143
Mva1269I GAATGC 2 cut(s) 1187, 1542
MvaI CCWGG 4 cut(s) 355, 1007, 1298, 1305
MvnI CGCG 1 cut(s) 277
MwoI GCNNNNNNNGC 4 cut(s) 239, 283, 521, 1463
NdeII GATC 3 cut(s) 359, 965, 1280
NlaIV GGNNCC 6 cut(s) 6, 294, 771, 1036, 1058, 1302
NmuCI GTSAC 6 cut(s) 554, 563, 793, 1190, 1204, 1372
NsiI ATGCAT 1 cut(s) 1417
NspI RCATGY 2 cut(s) 1212, 1509
NspV TTCGAA 1 cut(s) 706
OliI CACNNNNGTG 1 cut(s) 1471
PaeR7I CTCGAG 1 cut(s) 119
PagI TCATGA 3 cut(s) 409, 1546, 1585
PauI GCGCGC 1 cut(s) 275
PceI AGGCCT 1 cut(s) 1351
PctI GAATGC 2 cut(s) 1187, 1542
PdmI GAANNNNTTC 3 cut(s) 220, 417, 462
PfeI GAWTC 5 cut(s) 443, 488, 1019, 1517, 1564
PflFI GACNNNGTC 2 cut(s) 584, 799
PflMI CCANNNNNTGG 1 cut(s) 62
PinAI ACCGGT 1 cut(s) 1059
PkrI GCNGC 8 cut(s) 208, 241, 548, 626, 916, 1090, 1273, 1456
PleI GAGTC 3 cut(s) 808, 976, 1570
PmaCI CACGTG 1 cut(s) 776
PmlI CACGTG 1 cut(s) 776
PpsI GAGTC 3 cut(s) 808, 976, 1570
Ppu21I YACGTR 1 cut(s) 776
PpuMI RGGWCCY 1 cut(s) 1034
Psp5II RGGWCCY 1 cut(s) 1034
Psp6I CCWGG 4 cut(s) 353, 1005, 1296, 1303
PspCI CACGTG 1 cut(s) 776
PspEI GGTNACC 1 cut(s) 554
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 4 cut(s) 353, 1005, 1296, 1303
PspN4I GGNNCC 6 cut(s) 6, 294, 771, 1036, 1058, 1302
PspPI GGNCC 8 cut(s) 193, 302, 932, 1034, 1115, 1288, 1491, 1592
PspPPI RGGWCCY 1 cut(s) 1034
PstI CTGCAG 1 cut(s) 619
PsuI RGATCY 1 cut(s) 965
PsyI GACNNNGTC 2 cut(s) 584, 799
PteI GCGCGC 1 cut(s) 275
PvuII CAGCTG 3 cut(s) 242, 1274, 1457
RsaI GTAC 5 cut(s) 1004, 1103, 1255, 1386, 1392
RsaNI GTAC 5 cut(s) 1003, 1102, 1254, 1385, 1391
RseI CAYNNNNRTG 2 cut(s) 576, 1471
SaqAI TTAA 5 cut(s) 89, 1028, 1130, 1398, 1535
SatI GCNGC 8 cut(s) 207, 240, 547, 625, 915, 1089, 1272, 1455
Sau3AI GATC 3 cut(s) 359, 965, 1280
Sau96I GGNCC 8 cut(s) 193, 302, 932, 1034, 1115, 1288, 1491, 1592
ScaI AGTACT 1 cut(s) 1255
SchI GAGTC 3 cut(s) 809, 976, 1570
ScrFI CCNGG 4 cut(s) 355, 1007, 1298, 1305
SfaNI GCATC 7 cut(s) 22, 295, 533, 926, 1317, 1430, 1453
SfcI CTRYAG 1 cut(s) 615
Sfr274I CTCGAG 1 cut(s) 119
SfuI TTCGAA 1 cut(s) 706
SinI GGWCC 3 cut(s) 932, 1034, 1288
SlaI CTCGAG 1 cut(s) 119
SmiMI CAYNNNNRTG 2 cut(s) 576, 1471
SmlI CTYRAG 2 cut(s) 88, 119
SmoI CTYRAG 2 cut(s) 88, 119
SpeI ACTAGT 1 cut(s) 1523
Sse9I AATT 7 cut(s) 19, 73, 494, 691, 708, 1143, 1174
SseBI AGGCCT 1 cut(s) 1351
SspMI CTAG 2 cut(s) 1524, 1539
StuI AGGCCT 1 cut(s) 1351
StyD4I CCNGG 4 cut(s) 353, 1005, 1296, 1303
StyI CCWWGG 2 cut(s) 1216, 1595
TaaI ACNGT 7 cut(s) 184, 670, 904, 995, 1002, 1068, 1151
TaiI ACGT 1 cut(s) 778
TaqI TCGA 6 cut(s) 108, 120, 421, 466, 706, 1238
TasI AATT 7 cut(s) 19, 73, 494, 691, 708, 1143, 1174
TatI WGTACW 2 cut(s) 1253, 1384
TfiI GAWTC 5 cut(s) 443, 488, 1019, 1517, 1564
Tru1I TTAA 5 cut(s) 89, 1028, 1130, 1398, 1535
Tru9I TTAA 5 cut(s) 89, 1028, 1130, 1398, 1535
TscAI CASTG 5 cut(s) 847, 1000, 1073, 1507, 1565
TseFI GTSAC 6 cut(s) 554, 563, 793, 1190, 1204, 1372
TseI GCWGC 8 cut(s) 206, 239, 546, 624, 914, 1088, 1271, 1454
Tsp45I GTSAC 6 cut(s) 554, 563, 793, 1190, 1204, 1372
TspDTI ATGAA 6 cut(s) 33, 276, 426, 528, 1254, 1535
TspGWI ACGGA 1 cut(s) 679
TspRI CASTG 5 cut(s) 847, 1000, 1073, 1507, 1565
Tth111I GACNNNGTC 2 cut(s) 584, 799
Van91I CCANNNNNTGG 1 cut(s) 62
Vha464I CTTAAG 1 cut(s) 88
VpaK11BI GGWCC 3 cut(s) 932, 1034, 1288
XapI RAATTY 3 cut(s) 691, 708, 1174
XceI RCATGY 2 cut(s) 1212, 1509
XhoI CTCGAG 1 cut(s) 119
XmnI GAANNNNTTC 3 cut(s) 220, 417, 462
XspI CTAG 2 cut(s) 1524, 1539
ZrmI AGTACT 1 cut(s) 1255
Zsp2I ATGCAT 1 cut(s) 1417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.