Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Forward (+)

34864798 .. 34869390

Gene Structure 4593 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g41520.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGCACGCTCGTCACCGCAATCCCGGAAATGGGTACCGGTCTAATTCCATGGCTATGGACCGAATCGGAATGGGTCGGATCTCGCCGGAAACCTCACTCCGCGGCCACGGCTATTACAACCACCACAACAACGAACCACCTCCTCGCAACAACGCCGCGGCCTACAACCGCGGCTTCGGCCGGTCGAAATCGTTTCAACCGCCACCTCCGCCGCCGCCGCTGACAGCTCCGCCGCGGAAAGGTGATGTTTTTATGGACGCCGGCCGGATGGCGGCGGAGTATCTGGTGGCCCAGGGGCTGCTGCCGCCGAGCGTGCTTTCGGGGAAGTGGCAGAAGAAGCAGCAGGTGGAGTTTGAGGGTGATCAAATGCGAGAGGATGGCCGAACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGACGGAGGTTACCGAAGAGGAAGGTTTGGAGTGGATGAGTTCAGTAGTACTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGTGGGTATGGGTCGGATACCCGGCCCGATTGGGGGAGGGAGTATGGGAGGAGTGGGTCGTTTTCGGATAGGCATAGCCGGGCAGCCTCGTCTGAAGATGACTCTGCTTCTGGGAGACATGAGGAGCAGAAGGTGGGAAGAGATGTGGGGAATGCGTGGCAGCAGAATGCTAGGGAGAGTGAGGATGCAGTGGATTCGGAGACGAAATCGGAGAAGGAGGATATGAGCTCGAAGCCGAGTTCTTCTGGGGCTTGGAGAGACGGTGCAAATGGGAGTGATGGAGTTGCTGAAGTTAATGTGGAACCCAGGAAGTTGAAGGATGTAGAGATGAAGGATAAGGATTGTGCAACCAATGATGAAACCGAGAAACAGAATGCTGTGGAGGACTTGCCGGTTCAGGTTAAAGCCGAGGGGGAGGGCACTGATTTGTTGAAGCTATGTAAATTTGCCAAGGTGCCTACTAGAATTCGTTCGGCATTGACCAGTAGGAGTTTGAAGGTTGATCCCCAACCAAATATCCAAGAGGGAAGCACGTCGTCTGGCATTGGTCTGCAACTGGGAGGATCATCTCAAGGTTTGGTCGAAAACAGTACTCTTGATGTCTCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGCAAGTTGTGTTGATCGTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATCAGGTTCTGGATTTGGTATCGAGCATAATAAGTTTGAGAGGTCCCAGTCATTACCTGATAGAGCTTTTATGCGTGAGAATGAGCCTAAAGGGCCAGCAGGGCTTAGGAGTTTTAGCTTTGTAGTTAATGACAGAGGTGAAAAGAGAGCTTTAGAAGACTATGATAAGCAGATGGAAGCAAAAAAACCAAGAGAATGGCTTCCCTATGCAGAGTCAGATGATTGCTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCATTGGAGGACAACACTTCTCCTGCTGAAAAAGTGATTGTTGCTGTTGATCATGACAGCTCTATGGGAAATGATCCTCAGTTCCGAAAAGATGGAGCTGAAATTTGTATTGACTATATGCAAGAGAAGCAGCTTTTTCCAAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAATCGTGATAATAATCGTGTAATAAACTACCCGGATGTCTCTGGAGTGAAGAAAGAAGCAGCACCAGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAAAGCAATAGACGCACTGTGGATGTCAAAGAGATTGAAGTAATTGATTTAGAAAATGACTCTACTCCTGAAGACAAGGCCTTCAATAATGCAGAAAGAAAGACAGGGACTGAATTTATACCTCTAGATGGCTTTTCCAACCAACCAAAGAACTCTAGCGGTATCCCTGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAATTGTTGGGAAATGATTTCCCAACTTGTTCTTCAGTACCAGAGAATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGGAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGAGAAATACCATTGACCTTCATGAGTCCCTGGGAGCAGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

721

Amino Acids

79.39

Weight (kDa)

4.98

Isoelectric Point (pI)

51.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	334
Acc36I	ACCTGC	1 cut(s)	334
Acc65I	GGTACC	2 cut(s)	33, 1112
AccB1I	GGYRCC	3 cut(s)	33, 955, 1112
AccII	CGCG	4 cut(s)	102, 158, 171, 235
AclWI	GGATC	4 cut(s)	86, 998, 1072, 1535
AcoI	YGGCCR	5 cut(s)	103, 178, 262, 379, 1933
AcsI	RAATTY	7 cut(s)	944, 966, 1195, 1437, 1569, 1609, 1874
AcuI	CTGAAG	4 cut(s)	615, 810, 1851, 1980
AcyI	GRCGYC	1 cut(s)	258
AfaI	GTAC	5 cut(s)	35, 466, 1093, 1114, 2001
AfiI	CCNNNNNNNGG	8 cut(s)	29, 30, 239, 271, 388, 533, 534, 1889
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	197, 817, 934, 997, 1799, 1846, 2076
AjiI	CACGTC	1 cut(s)	1035
AjnI	CCWGG	3 cut(s)	291, 806, 2120
AjuI	GAANNNNNNNTTGG	2 cut(s)	1978, 2010
AluBI	AGCT	9 cut(s)	227, 729, 937, 1271, 1323, 1355, 1527, 1565, 1600
AluI	AGCT	9 cut(s)	227, 729, 937, 1271, 1323, 1355, 1527, 1565, 1600
Alw21I	GWGCWC	1 cut(s)	731
Alw26I	GTCTC	6 cut(s)	610, 695, 753, 1108, 1696, 1761
AlwI	GGATC	4 cut(s)	86, 998, 1072, 1535
AlwNI	CAGNNNCTG	3 cut(s)	298, 1214, 1871
ApeKI	GCWGC	8 cut(s)	298, 301, 340, 584, 661, 1597, 1712, 2128
ApoI	RAATTY	7 cut(s)	944, 966, 1195, 1437, 1569, 1609, 1874
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	3 cut(s)	412, 970, 1404
Asp718I	GGTACC	2 cut(s)	33, 1112
AspLEI	GCGC	1 cut(s)	394
AspS9I	GGNCC	5 cut(s)	58, 289, 525, 1248, 1298
AsuC2I	CCSGG	5 cut(s)	24, 500, 523, 581, 1685
AsuHPI	GGTGA	4 cut(s)	5, 254, 371, 1355
AvaII	GGWCC	2 cut(s)	58, 1248
AxyI	CCTNAGG	1 cut(s)	1108
BaeGI	GKGCMC	1 cut(s)	923
BaeI	ACNNNNGTAYC	2 cut(s)	1104, 1137
BalI	TGGCCA	1 cut(s)	1935
BanI	GGYRCC	3 cut(s)	33, 955, 1112
BanII	GRGCYC	1 cut(s)	731
BauI	CACGAG	1 cut(s)	1758
BbsI	GAAGAC	3 cut(s)	1368, 1839, 2030
Bbv12I	GWGCWC	1 cut(s)	731
BbvI	GCAGC	8 cut(s)	285, 288, 352, 596, 673, 1609, 1724, 2140
BccI	CCATC	8 cut(s)	262, 371, 773, 1372, 1553, 1883, 1925, 1934
BceAI	ACGGC	1 cut(s)	124
BcgI	CGANNNNNNTGC	2 cut(s)	678, 712
BciT130I	CCWGG	3 cut(s)	293, 808, 2122
BciVI	GTATCC	2 cut(s)	511, 1934
BclI	TGATCA	2 cut(s)	361, 1516
BcnI	CCSGG	5 cut(s)	24, 500, 523, 581, 1685
BcoDI	GTCTC	6 cut(s)	610, 695, 753, 1108, 1696, 1761
BfaI	CTAG	4 cut(s)	672, 963, 1886, 1917
BfoI	RGCGCY	1 cut(s)	395
BfuAI	ACCTGC	1 cut(s)	334
BfuI	GTATCC	2 cut(s)	511, 1934
BglI	GCCNNNNNGGC	2 cut(s)	1297, 1306
BmcAI	AGTACT	2 cut(s)	466, 1093
Bme1390I	CCNGG	8 cut(s)	24, 293, 500, 523, 581, 808, 1685, 2122
Bme18I	GGWCC	2 cut(s)	58, 1248
BmgBI	CACGTC	1 cut(s)	1035
BmgT120I	GGNCC	5 cut(s)	58, 289, 525, 1248, 1298
BmiI	GGNNCC	6 cut(s)	35, 497, 804, 957, 1114, 1250
BmrFI	CCNGG	8 cut(s)	24, 293, 500, 523, 581, 808, 1685, 2122
BmrI	ACTGGG	3 cut(s)	1067, 1112, 1246
BmsI	GCATC	2 cut(s)	676, 1633
BmuI	ACTGGG	3 cut(s)	1067, 1112, 1246
BpiI	GAAGAC	3 cut(s)	1368, 1839, 2030
BpmI	CTGGAG	1 cut(s)	1716
Bpu10I	CCTNAGC	1 cut(s)	1310
BpuEI	CTTGAG	1 cut(s)	1056
BpuMI	CCSGG	5 cut(s)	24, 500, 523, 581, 1685
BsaBI	GATNNNNATC	1 cut(s)	1665
BsaHI	GRCGYC	1 cut(s)	258
BsaWI	WCCGGW	1 cut(s)	36
BsaXI	ACNNNNNCTCC	2 cut(s)	748, 778
Bsc4I	CCNNNNNNNGG	8 cut(s)	29, 30, 239, 271, 388, 533, 534, 1889
Bse118I	RCCGGY	4 cut(s)	36, 180, 260, 892
Bse1I	ACTGG	6 cut(s)	984, 1062, 1118, 1179, 1252, 1718
Bse21I	CCTNAGG	1 cut(s)	1108
Bse8I	GATNNNNATC	1 cut(s)	1665
BseBI	CCWGG	3 cut(s)	293, 808, 2122
BseGI	GGATG	7 cut(s)	273, 382, 457, 691, 826, 1693, 1789
BseJI	GATNNNNATC	1 cut(s)	1665
BseLI	CCNNNNNNNGG	8 cut(s)	29, 30, 239, 271, 388, 533, 534, 1889
BseMII	CTCAG	2 cut(s)	1122, 1559
BseNI	ACTGG	6 cut(s)	984, 1062, 1118, 1179, 1252, 1718
BseRI	GAGGAG	6 cut(s)	132, 502, 505, 565, 638, 1096
BseSI	GKGCMC	1 cut(s)	923
BseX3I	CGGCCG	2 cut(s)	178, 262
BseXI	GCAGC	8 cut(s)	285, 288, 352, 596, 673, 1609, 1724, 2140
Bsh1236I	CGCG	4 cut(s)	102, 158, 171, 235
Bsh1285I	CGRYCG	3 cut(s)	181, 185, 265
BshNI	GGYRCC	3 cut(s)	33, 955, 1112
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	3 cut(s)	181, 185, 265
BsiHKAI	GWGCWC	1 cut(s)	731
BslFI	GGGAC	4 cut(s)	1234, 1882, 2068, 2103
BslI	CCNNNNNNNGG	8 cut(s)	29, 30, 239, 271, 388, 533, 534, 1889
BsmAI	GTCTC	6 cut(s)	610, 695, 753, 1108, 1696, 1761
BsmBI	CGTCTC	2 cut(s)	695, 753
BsmFI	GGGAC	4 cut(s)	1234, 1882, 2068, 2103
BsmI	GAATGC	3 cut(s)	658, 673, 880
Bsp1286I	GDGCHC	2 cut(s)	731, 923
Bsp143I	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
Bsp19I	CCATGG	1 cut(s)	48
BspCNI	CTCAG	2 cut(s)	1121, 1558
BspFNI	CGCG	4 cut(s)	102, 158, 171, 235
BspHI	TCATGA	2 cut(s)	1519, 2112
BspLI	GGNNCC	6 cut(s)	35, 497, 804, 957, 1114, 1250
BspMI	ACCTGC	1 cut(s)	334
BspPI	GGATC	4 cut(s)	86, 998, 1072, 1535
BspT107I	GGYRCC	3 cut(s)	33, 955, 1112
BsrFI	RCCGGY	4 cut(s)	36, 180, 260, 892
BsrI	ACTGG	6 cut(s)	984, 1062, 1118, 1179, 1252, 1718
BssAI	RCCGGY	4 cut(s)	36, 180, 260, 892
BssMI	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
BssNI	GRCGYC	1 cut(s)	258
BssSI	CACGAG	1 cut(s)	1758
BssT1I	CCWWGG	2 cut(s)	48, 951
Bst2BI	CACGAG	1 cut(s)	1758
Bst2UI	CCWGG	3 cut(s)	293, 808, 2122
Bst4CI	ACNGT	3 cut(s)	764, 1091, 1780
Bst6I	CTCTTC	2 cut(s)	427, 634
BstACI	GRCGYC	1 cut(s)	258
BstC8I	GCNNGC	4 cut(s)	6, 262, 314, 1302
BstDEI	CTNAG	3 cut(s)	1108, 1310, 1545
BstDSI	CCRYGG	6 cut(s)	48, 100, 106, 156, 169, 233
BstEII	GGTNACC	1 cut(s)	425
BstF5I	GGATG	7 cut(s)	273, 382, 457, 691, 826, 1693, 1789
BstFNI	CGCG	4 cut(s)	102, 158, 171, 235
BstH2I	RGCGCY	1 cut(s)	395
BstHHI	GCGC	1 cut(s)	394
BstKTI	GATC	8 cut(s)	81, 364, 1006, 1067, 1156, 1519, 1543, 1959
BstMAI	GTCTC	6 cut(s)	610, 695, 753, 1108, 1696, 1761
BstMBI	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
BstMCI	CGRYCG	3 cut(s)	181, 185, 265
BstNI	CCWGG	3 cut(s)	293, 808, 2122
BstPI	GGTNACC	1 cut(s)	425
BstSCI	CCNGG	8 cut(s)	22, 291, 498, 521, 579, 806, 1683, 2120
BstSLI	GKGCMC	1 cut(s)	923
BstUI	CGCG	4 cut(s)	102, 158, 171, 235
BstV1I	GCAGC	8 cut(s)	285, 288, 352, 596, 673, 1609, 1724, 2140
BstV2I	GAAGAC	3 cut(s)	1368, 1839, 2030
BstX2I	RGATCY	1 cut(s)	78
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1401
BstYI	RGATCY	1 cut(s)	78
BstZI	CGGCCG	2 cut(s)	178, 262
Bsu36I	CCTNAGG	1 cut(s)	1108
BsuI	GTATCC	2 cut(s)	511, 1934
BtgI	CCRYGG	6 cut(s)	48, 100, 106, 156, 169, 233
BtgZI	GCGATG	1 cut(s)	1656
BtrI	CACGTC	1 cut(s)	1035
BtsCI	GGATG	7 cut(s)	273, 382, 457, 691, 826, 1693, 1789
BtsI	GCAGTG	1 cut(s)	696
BtsIMutI	CAGTG	3 cut(s)	696, 921, 1776
BveI	ACCTGC	1 cut(s)	334
Cac8I	GCNNGC	4 cut(s)	6, 262, 314, 1302
CaiI	CAGNNNCTG	3 cut(s)	298, 1214, 1871
CciI	TCATGA	2 cut(s)	1519, 2112
CfoI	GCGC	1 cut(s)	394
Cfr10I	RCCGGY	4 cut(s)	36, 180, 260, 892
Cfr13I	GGNCC	5 cut(s)	58, 289, 525, 1248, 1298
Cfr42I	CCGCGG	4 cut(s)	103, 159, 172, 236
CseI	GACGC	2 cut(s)	266, 1782
Csp6I	GTAC	5 cut(s)	34, 465, 1092, 1113, 2000
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	6 cut(s)	49, 620, 1520, 1630, 1649, 2113
CviQI	GTAC	5 cut(s)	34, 465, 1092, 1113, 2000
DdeI	CTNAG	3 cut(s)	1108, 1310, 1545
DpnI	GATC	8 cut(s)	80, 363, 1005, 1066, 1155, 1518, 1542, 1958
DpnII	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
EaeI	YGGCCR	5 cut(s)	103, 178, 262, 379, 1933
EagI	CGGCCG	2 cut(s)	178, 262
Eam1104I	CTCTTC	2 cut(s)	427, 634
EarI	CTCTTC	2 cut(s)	427, 634
EciI	GGCGGA	3 cut(s)	198, 219, 290
Ecl136II	GAGCTC	1 cut(s)	729
EclXI	CGGCCG	2 cut(s)	178, 262
Eco130I	CCWWGG	2 cut(s)	48, 951
Eco147I	AGGCCT	1 cut(s)	1841
Eco24I	GRGCYC	1 cut(s)	731
Eco47I	GGWCC	2 cut(s)	58, 1248
Eco52I	CGGCCG	2 cut(s)	178, 262
Eco53kI	GAGCTC	1 cut(s)	729
Eco57I	CTGAAG	4 cut(s)	615, 810, 1851, 1980
Eco81I	CCTNAGG	1 cut(s)	1108
Eco91I	GGTNACC	1 cut(s)	425
EcoICRI	GAGCTC	1 cut(s)	729
EcoO109I	RGGNCCY	1 cut(s)	1248
EcoO65I	GGTNACC	1 cut(s)	425
EcoRI	GAATTC	1 cut(s)	966
EcoRII	CCWGG	3 cut(s)	291, 806, 2120
EcoT14I	CCWWGG	2 cut(s)	48, 951
EcoT38I	GRGCYC	1 cut(s)	731
ErhI	CCWWGG	2 cut(s)	48, 951
Esp3I	CGTCTC	2 cut(s)	695, 753
FaeI	CATG	6 cut(s)	52, 623, 1523, 1633, 1652, 2116
FaqI	GGGAC	4 cut(s)	1234, 1882, 2068, 2103
FatI	CATG	6 cut(s)	48, 619, 1519, 1629, 1648, 2112
FauI	CCCGC	1 cut(s)	2145
FbaI	TGATCA	2 cut(s)	361, 1516
FokI	GGATG	7 cut(s)	280, 389, 464, 698, 833, 1700, 1796
FriOI	GRGCYC	1 cut(s)	731
FspBI	CTAG	4 cut(s)	672, 963, 1886, 1917
GlaI	GCGC	1 cut(s)	393
GsuI	CTGGAG	1 cut(s)	1716
HaeII	RGCGCY	1 cut(s)	395
HgaI	GACGC	2 cut(s)	266, 1782
HhaI	GCGC	1 cut(s)	394
Hin1I	GRCGYC	1 cut(s)	258
Hin1II	CATG	6 cut(s)	52, 623, 1523, 1633, 1652, 2116
Hin6I	GCGC	1 cut(s)	392
HinP1I	GCGC	1 cut(s)	392
HphI	GGTGA	4 cut(s)	5, 254, 371, 1355
Hpy99I	CGWCG	2 cut(s)	391, 1039
HpyAV	CCTTC	8 cut(s)	432, 625, 709, 811, 826, 991, 1852, 2119
HpyCH4III	ACNGT	3 cut(s)	764, 1091, 1780
HpyCH4IV	ACGT	2 cut(s)	386, 1034
HpyF3I	CTNAG	3 cut(s)	1108, 1310, 1545
HpySE526I	ACGT	2 cut(s)	386, 1034
Hsp92I	GRCGYC	1 cut(s)	258
Hsp92II	CATG	6 cut(s)	52, 623, 1523, 1633, 1652, 2116
HspAI	GCGC	1 cut(s)	392
KpnI	GGTACC	2 cut(s)	37, 1116
KroI	GCCGGC	1 cut(s)	260
KroNI	GCCGGC	1 cut(s)	262
Ksp22I	TGATCA	2 cut(s)	361, 1516
KspI	CCGCGG	4 cut(s)	103, 159, 172, 236
Kzo9I	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
LmnI	GCTCC	4 cut(s)	232, 625, 1562, 2125
Lsp1109I	GCAGC	8 cut(s)	285, 288, 352, 596, 673, 1609, 1724, 2140
LweI	GCATC	2 cut(s)	676, 1633
MaeI	CTAG	4 cut(s)	672, 963, 1886, 1917
MaeII	ACGT	2 cut(s)	386, 1034
MaeIII	GTNAC	3 cut(s)	11, 425, 1742
MalI	GATC	8 cut(s)	80, 363, 1005, 1066, 1155, 1518, 1542, 1958
MboI	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
MflI	RGATCY	1 cut(s)	78
MhlI	GDGCHC	2 cut(s)	731, 923
MlsI	TGGCCA	1 cut(s)	1935
MluNI	TGGCCA	1 cut(s)	1935
MlyI	GAGTC	6 cut(s)	596, 1184, 1427, 1814, 2050, 2125
MmeI	TCCRAC	3 cut(s)	56, 495, 1923
Mox20I	TGGCCA	1 cut(s)	1935
MroNI	GCCGGC	1 cut(s)	260
MroXI	GAANNNNTTC	3 cut(s)	412, 970, 1404
MscI	TGGCCA	1 cut(s)	1935
MseI	TTAA	5 cut(s)	795, 903, 1332, 1623, 2161
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1935
MspA1I	CMGCKG	5 cut(s)	102, 158, 171, 220, 235
MspR9I	CCNGG	8 cut(s)	24, 293, 500, 523, 581, 808, 1685, 2122
Mva1269I	GAATGC	3 cut(s)	658, 673, 880
MvaI	CCWGG	3 cut(s)	293, 808, 2122
MvnI	CGCG	4 cut(s)	102, 158, 171, 235
NaeI	GCCGGC	1 cut(s)	262
NciI	CCSGG	5 cut(s)	24, 500, 523, 581, 1685
NcoI	CCATGG	1 cut(s)	48
NdeII	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
NgoMIV	GCCGGC	1 cut(s)	260
NlaIII	CATG	6 cut(s)	52, 623, 1523, 1633, 1652, 2116
NlaIV	GGNNCC	6 cut(s)	35, 497, 804, 957, 1114, 1250
NmeAIII	GCCGAG	3 cut(s)	333, 762, 934
NmuCI	GTSAC	1 cut(s)	11
PagI	TCATGA	2 cut(s)	1519, 2112
PaqCI	CACCTGC	1 cut(s)	334
PasI	CCCWGGG	2 cut(s)	292, 2121
PceI	AGGCCT	1 cut(s)	1841
PctI	GAATGC	3 cut(s)	658, 673, 880
PdiI	GCCGGC	1 cut(s)	262
PdmI	GAANNNNTTC	3 cut(s)	412, 970, 1404
PfeI	GAWTC	6 cut(s)	63, 695, 1205, 1654, 2008, 2072
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	6 cut(s)	596, 1183, 1426, 1814, 2050, 2124
PpsI	GAGTC	6 cut(s)	596, 1183, 1426, 1814, 2050, 2124
PpuMI	RGGWCCY	1 cut(s)	1248
Psp124BI	GAGCTC	1 cut(s)	731
Psp5II	RGGWCCY	1 cut(s)	1248
Psp6I	CCWGG	3 cut(s)	291, 806, 2120
PspEI	GGTNACC	1 cut(s)	425
PspGI	CCWGG	3 cut(s)	291, 806, 2120
PspN4I	GGNNCC	6 cut(s)	35, 497, 804, 957, 1114, 1250
PspPI	GGNCC	5 cut(s)	58, 289, 525, 1248, 1298
PspPPI	RGGWCCY	1 cut(s)	1248
PstNI	CAGNNNCTG	3 cut(s)	298, 1214, 1871
PsuI	RGATCY	1 cut(s)	78
RsaI	GTAC	5 cut(s)	35, 466, 1093, 1114, 2001
RsaNI	GTAC	5 cut(s)	34, 465, 1092, 1113, 2000
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	731
SacII	CCGCGG	4 cut(s)	103, 159, 172, 236
SaqAI	TTAA	5 cut(s)	795, 903, 1332, 1623, 2161
Sau3AI	GATC	8 cut(s)	78, 361, 1003, 1064, 1153, 1516, 1540, 1956
Sau96I	GGNCC	5 cut(s)	58, 289, 525, 1248, 1298
ScaI	AGTACT	2 cut(s)	466, 1093
SchI	GAGTC	6 cut(s)	596, 1184, 1427, 1814, 2050, 2125
ScrFI	CCNGG	8 cut(s)	24, 293, 500, 523, 581, 808, 1685, 2122
SduI	GDGCHC	2 cut(s)	731, 923
SfaNI	GCATC	2 cut(s)	676, 1633
Sfr303I	CCGCGG	4 cut(s)	103, 159, 172, 236
SgrBI	CCGCGG	4 cut(s)	103, 159, 172, 236
SinI	GGWCC	2 cut(s)	58, 1248
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1071
SmoI	CTYRAG	1 cut(s)	1071
SseBI	AGGCCT	1 cut(s)	1841
SspMI	CTAG	4 cut(s)	672, 963, 1886, 1917
SstI	GAGCTC	1 cut(s)	731
StuI	AGGCCT	1 cut(s)	1841
StyD4I	CCNGG	8 cut(s)	22, 291, 498, 521, 579, 806, 1683, 2120
StyI	CCWWGG	2 cut(s)	48, 951
TaaI	ACNGT	3 cut(s)	764, 1091, 1780
TaiI	ACGT	2 cut(s)	389, 1037
TaqI	TCGA	5 cut(s)	185, 731, 1083, 1227, 1617
TaqII	GACCGA	1 cut(s)	75
TatI	WGTACW	2 cut(s)	464, 1091
TfiI	GAWTC	6 cut(s)	63, 695, 1205, 1654, 2008, 2072
Tru1I	TTAA	5 cut(s)	795, 903, 1332, 1623, 2161
Tru9I	TTAA	5 cut(s)	795, 903, 1332, 1623, 2161
TscAI	CASTG	3 cut(s)	696, 928, 1783
TseFI	GTSAC	1 cut(s)	11
TseI	GCWGC	8 cut(s)	298, 301, 340, 584, 661, 1597, 1712, 2128
Tsp45I	GTSAC	1 cut(s)	11
TspDTI	ATGAA	4 cut(s)	845, 873, 1602, 2101
TspGWI	ACGGA	1 cut(s)	435
TspRI	CASTG	3 cut(s)	696, 928, 1783
VpaK11BI	GGWCC	2 cut(s)	58, 1248
XapI	RAATTY	7 cut(s)	944, 966, 1195, 1437, 1569, 1609, 1874
XbaI	TCTAGA	1 cut(s)	1885
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1943
XmnI	GAANNNNTTC	3 cut(s)	412, 970, 1404
XspI	CTAG	4 cut(s)	672, 963, 1886, 1917
ZrmI	AGTACT	2 cut(s)	466, 1093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.