Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Reverse (-)

9005246 .. 9010485

Gene Structure 5240 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00007030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGCACGCCCGCCACCGCAATCCCGGAAATGGGTACCGGTCTAATTCCATGGGTATGGACCGTATCGGAATGGGTCGGATCTCGCCGGAGGGCTCACTCCGCGGCCATGGCTATTACAACAACAACTCGGACCCCCCTCACCGCAACAACAACAACAACAACTTCAATCGCGGCTACGGCCGGTCGAAATCGTTCCAGCCGCCGCCACCGCCTCCGCCGCCGCCGCCGCGAAAAGGGGACATCTTTATGGACGCCGGGCGGATGGCGGCGGAGTATTTGGTGGCGCAGGGGCTTCTGCCGGCGAGCGTGCTGTCGGCCAAGTGGCAGAAGAAGCAGCAGGTAGAGTTTGAGGGTGGTGATCATATGAGAGAGGAGGGGCGGACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGAGGGAGGAGGGTACAGAAGAGGAAGGTTTGGGGGTGTGGATGAGTTCAGTAGTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGCGGCGGGTACGGGTCGGATACCCGGCCCGATTGGTATGGGAGGAGTGGGACATTTTCGGATAGGCATAGTAGGGCTTCTTCTGAGTGTGAGGATGATTCTGCTTCTGGGAGGCATGAGGAGCCCAAGGTGGGGAGAGATGTTGGGAATGCAAGGGAGAGTGAGGATGCAGTGGATTCGGAGACGAAGGAGGATACGAGCTCGAAGCCGAGTTCTGCTGGTGCAAATGGGACTGAAGGAGTTGTTGTTGGAGTAAATGTGGAGCCCAACAAGGTGAATGATGTAGAGATGAAGGATAAGGATTGTGGCAATGGTGATGAAACTGAGAAACAGAGTGTTGTGGAGGAGTTGCCGGTTCAGGTTAAGGCCGAGGGAGAGGGGGATTTGGGTGGTAGGAATGGCACTGATTTGTTGAAACTATGCAAATTCGCCAAGGTGCCTACTAGAATTCGCTCGGCATTGACTACTAGGGGTTTGAAGGTTGATCCACTTCCAATTATCCAAGAGGGAAGCACGTCGTCTGACATTGGTCTGCAACTGGGAGGATCATCTCAAGGTTTAGTCGAAAACCGTTCTCTTGATGTCGCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGTTGATCCTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATTAGGTTCTGGATTTGGTATTGAGCAGAATAAGTTTGAAAGGTCCCAGTCATTACCAGATAGAGCTTTTAAGCGTGAGAATGAACAAGAATTGATTCAAGGGCCAGCAGGGCGTAGGAGTTTTAGCTTTGCAGTTAAGGAAAGAGGTGAGAAGAGGGCTTTAGAAGACCATGATAAGCAGGTGGAAGCAAAAAAACCAAGAGAATGGCTTCCCTACGCAGAGTCAGATGATTGTTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCGTTGGAGGACAACACTTCTCCTGCTGAGAAAGTGATTGTAGCTGTTGATCATGACAGCTCAATGGGAAATGATTCCCAGTTCCGAAAAGATGGAGCTGAAATTTGTGTCGATTATATGCAAGAGAAGCAGCTTTTTCCTAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAGTCGTGATAGTAATTCTGTAATAAACTACACGGATGTCTCTAAAGTGAAGAAAGAAGCAGCGCCGGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAGAGCAGTAGACGCCCTGTGGATGTCAAAGGGATAGAAGTAATTGATTTAGAAAATGACTGTATTCCTGAAGACAAGGCCTTCAATAATGCGGAAAGAAAGACAGGGACTGAATTTATACCTCTAGATGGCTTTTCCAACCAACCACAGAACTCTAGTGATATCCCCGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAGTTGCTGGGAAATGATTTCCCTACTTGTTCTTCAGTACCGGAGGATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGCAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGTGAAATACCATTAACCTTCATGAGTCCCTGGGAGCGGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

714

Amino Acids

78.31

Weight (kDa)

4.92

Isoelectric Point (pI)

52.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1348
AatII	GACGTC	1 cut(s)	386
Acc36I	ACCTGC	2 cut(s)	328, 1348
Acc65I	GGTACC	2 cut(s)	33, 1094
AccB1I	GGYRCC	3 cut(s)	33, 937, 1094
AccBSI	CCGCTC	1 cut(s)	2110
AccI	GTMKAC	1 cut(s)	1753
AccII	CGCG	3 cut(s)	102, 171, 229
AclWI	GGATC	5 cut(s)	86, 980, 1054, 1121, 1998
AcoI	YGGCCR	5 cut(s)	103, 178, 315, 1915, 2111
AcsI	RAATTY	6 cut(s)	926, 948, 1168, 1419, 1551, 1856
AcuI	CTGAAG	3 cut(s)	756, 1833, 1962
AcyI	GRCGYC	3 cut(s)	252, 383, 1756
AfaI	GTAC	5 cut(s)	35, 428, 512, 1096, 1983
AfiI	CCNNNNNNNGG	7 cut(s)	29, 30, 233, 632, 633, 1871, 2109
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	166, 916, 979, 1217, 1277, 1828, 2058
AjiI	CACGTC	1 cut(s)	1017
AjnI	CCWGG	1 cut(s)	2102
AluBI	AGCT	7 cut(s)	702, 1244, 1305, 1493, 1509, 1547, 1582
AluI	AGCT	7 cut(s)	702, 1244, 1305, 1493, 1509, 1547, 1582
Alw21I	GWGCWC	1 cut(s)	704
Alw26I	GTCTC	3 cut(s)	677, 1678, 1743
AlwI	GGATC	5 cut(s)	86, 980, 1054, 1121, 1998
AlwNI	CAGNNNCTG	1 cut(s)	1853
AoxI	GGCC	9 cut(s)	103, 178, 315, 527, 867, 1280, 1821, 1915, 2111
ApeKI	GCWGC	3 cut(s)	334, 1579, 1694
ApoI	RAATTY	6 cut(s)	926, 948, 1168, 1419, 1551, 1856
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	5 cut(s)	191, 409, 1272, 1386, 1522
Asp718I	GGTACC	2 cut(s)	33, 1094
AspLEI	GCGC	3 cut(s)	286, 391, 1699
AspS9I	GGNCC	5 cut(s)	58, 130, 528, 1221, 1280
AsuC2I	CCSGG	4 cut(s)	24, 256, 500, 526
AsuHPI	GGTGA	6 cut(s)	131, 368, 787, 827, 1337, 2087
AvaII	GGWCC	3 cut(s)	58, 130, 1221
AxyI	CCTNAGG	1 cut(s)	1090
BaeI	ACNNNNGTAYC	2 cut(s)	1086, 1119
BalI	TGGCCA	1 cut(s)	1917
BanI	GGYRCC	3 cut(s)	33, 937, 1094
BanII	GRGCYC	4 cut(s)	95, 627, 704, 768
BarI	GAAGNNNNNNTAC	2 cut(s)	565, 597
BauI	CACGAG	1 cut(s)	1740
BbsI	GAAGAC	3 cut(s)	1350, 1821, 2012
Bbv12I	GWGCWC	1 cut(s)	704
BbvI	GCAGC	3 cut(s)	346, 1591, 1706
BccI	CCATC	5 cut(s)	256, 1535, 1865, 1907, 1916
BceAI	ACGGC	1 cut(s)	193
BcgI	CGANNNNNNTGC	2 cut(s)	660, 694
BciT130I	CCWGG	1 cut(s)	2104
BciVI	GTATCC	2 cut(s)	514, 688
BclI	TGATCA	2 cut(s)	358, 1498
BcnI	CCSGG	4 cut(s)	24, 256, 500, 526
BcoDI	GTCTC	3 cut(s)	677, 1678, 1743
BfaI	CTAG	4 cut(s)	945, 969, 1868, 1899
BfoI	RGCGCY	2 cut(s)	392, 1700
BfuAI	ACCTGC	2 cut(s)	328, 1348
BfuI	GTATCC	2 cut(s)	514, 688
BglI	GCCNNNNNGGC	1 cut(s)	1288
Bme1390I	CCNGG	5 cut(s)	24, 256, 500, 526, 2104
Bme18I	GGWCC	3 cut(s)	58, 130, 1221
BmgBI	CACGTC	1 cut(s)	1017
BmgT120I	GGNCC	5 cut(s)	58, 130, 528, 1221, 1280
BmiI	GGNNCC	8 cut(s)	35, 132, 497, 624, 765, 939, 1096, 1223
BmrFI	CCNGG	5 cut(s)	24, 256, 500, 526, 2104
BmrI	ACTGGG	4 cut(s)	1049, 1094, 1219, 1522
BmsI	GCATC	2 cut(s)	658, 1615
BmuI	ACTGGG	4 cut(s)	1049, 1094, 1219, 1522
BoxI	GACNNNNGTC	1 cut(s)	1029
BpiI	GAAGAC	3 cut(s)	1350, 1821, 2012
BpuEI	CTTGAG	1 cut(s)	1038
BpuMI	CCSGG	4 cut(s)	24, 256, 500, 526
BsaHI	GRCGYC	3 cut(s)	252, 383, 1756
BsaJI	CCNNGG	9 cut(s)	48, 100, 106, 499, 627, 870, 933, 2102, 2103
BsaWI	WCCGGW	2 cut(s)	36, 1984
BsaXI	ACNNNNNCTCC	4 cut(s)	732, 744, 762, 774
Bsc4I	CCNNNNNNNGG	7 cut(s)	29, 30, 233, 632, 633, 1871, 2109
Bse118I	RCCGGY	5 cut(s)	36, 180, 298, 853, 1699
Bse1I	ACTGG	5 cut(s)	1044, 1100, 1152, 1225, 1528
Bse21I	CCTNAGG	1 cut(s)	1090
Bse3DI	GCAATG	1 cut(s)	817
BseBI	CCWGG	1 cut(s)	2104
BseDI	CCNNGG	9 cut(s)	48, 100, 106, 499, 627, 870, 933, 2102, 2103
BseGI	GGATG	6 cut(s)	267, 460, 601, 673, 1675, 1771
BseLI	CCNNNNNNNGG	7 cut(s)	29, 30, 233, 632, 633, 1871, 2109
BseMI	GCAATG	1 cut(s)	817
BseMII	CTCAG	4 cut(s)	576, 816, 1104, 1467
BseNI	ACTGG	5 cut(s)	1044, 1100, 1152, 1225, 1528
BseRI	GAGGAG	7 cut(s)	386, 435, 502, 505, 559, 635, 860
BseX3I	CGGCCG	1 cut(s)	178
BseXI	GCAGC	3 cut(s)	346, 1591, 1706
BseYI	CCCAGC	1 cut(s)	1951
Bsh1236I	CGCG	3 cut(s)	102, 171, 229
Bsh1285I	CGRYCG	2 cut(s)	181, 185
BshFI	GGCC	9 cut(s)	105, 180, 317, 529, 869, 1282, 1823, 1917, 2113
BshNI	GGYRCC	3 cut(s)	33, 937, 1094
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	2 cut(s)	181, 185
BsiHKAI	GWGCWC	1 cut(s)	704
BslFI	GGGAC	7 cut(s)	251, 565, 745, 1207, 1864, 2050, 2085
BslI	CCNNNNNNNGG	7 cut(s)	29, 30, 233, 632, 633, 1871, 2109
BsmAI	GTCTC	3 cut(s)	677, 1678, 1743
BsmBI	CGTCTC	1 cut(s)	677
BsmFI	GGGAC	7 cut(s)	251, 565, 745, 1207, 1864, 2050, 2085
BsmI	GAATGC	1 cut(s)	655
BsnI	GGCC	9 cut(s)	105, 180, 317, 529, 869, 1282, 1823, 1917, 2113
Bsp1286I	GDGCHC	4 cut(s)	95, 627, 704, 768
Bsp143I	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	9 cut(s)	105, 180, 317, 529, 869, 1282, 1823, 1917, 2113
BspCNI	CTCAG	4 cut(s)	577, 817, 1103, 1468
BspFNI	CGCG	3 cut(s)	102, 171, 229
BspHI	TCATGA	2 cut(s)	1501, 2094
BspLI	GGNNCC	8 cut(s)	35, 132, 497, 624, 765, 939, 1096, 1223
BspMI	ACCTGC	2 cut(s)	328, 1348
BspPI	GGATC	5 cut(s)	86, 980, 1054, 1121, 1998
BspT107I	GGYRCC	3 cut(s)	33, 937, 1094
BsrBI	CCGCTC	1 cut(s)	2110
BsrDI	GCAATG	1 cut(s)	817
BsrFI	RCCGGY	5 cut(s)	36, 180, 298, 853, 1699
BsrI	ACTGG	5 cut(s)	1044, 1100, 1152, 1225, 1528
BssAI	RCCGGY	5 cut(s)	36, 180, 298, 853, 1699
BssECI	CCNNGG	9 cut(s)	48, 100, 106, 499, 627, 870, 933, 2102, 2103
BssMI	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
BssNI	GRCGYC	3 cut(s)	252, 383, 1756
BssSI	CACGAG	1 cut(s)	1740
BssT1I	CCWWGG	4 cut(s)	48, 106, 627, 933
Bst2BI	CACGAG	1 cut(s)	1740
Bst2UI	CCWGG	1 cut(s)	2104
Bst4CI	ACNGT	3 cut(s)	62, 1073, 1805
Bst6I	CTCTTC	2 cut(s)	427, 1325
BstACI	GRCGYC	3 cut(s)	252, 383, 1756
BstC8I	GCNNGC	6 cut(s)	6, 10, 300, 304, 308, 1284
BstDEI	CTNAG	4 cut(s)	585, 825, 1090, 1476
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	6 cut(s)	267, 460, 601, 673, 1675, 1771
BstFNI	CGCG	3 cut(s)	102, 171, 229
BstH2I	RGCGCY	2 cut(s)	392, 1700
BstHHI	GCGC	3 cut(s)	286, 391, 1699
BstKTI	GATC	8 cut(s)	81, 361, 988, 1049, 1129, 1501, 1941, 1993
BstMAI	GTCTC	3 cut(s)	677, 1678, 1743
BstMBI	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
BstMCI	CGRYCG	2 cut(s)	181, 185
BstNI	CCWGG	1 cut(s)	2104
BstPAI	GACNNNNGTC	1 cut(s)	1029
BstSCI	CCNGG	5 cut(s)	22, 254, 498, 524, 2102
BstUI	CGCG	3 cut(s)	102, 171, 229
BstV1I	GCAGC	3 cut(s)	346, 1591, 1706
BstV2I	GAAGAC	3 cut(s)	1350, 1821, 2012
BstX2I	RGATCY	2 cut(s)	78, 1990
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1383
BstYI	RGATCY	2 cut(s)	78, 1990
BstZI	CGGCCG	1 cut(s)	178
Bsu36I	CCTNAGG	1 cut(s)	1090
BsuI	GTATCC	2 cut(s)	514, 688
BsuRI	GGCC	9 cut(s)	105, 180, 317, 529, 869, 1282, 1823, 1917, 2113
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1638
BtrI	CACGTC	1 cut(s)	1017
BtsCI	GGATG	6 cut(s)	267, 460, 601, 673, 1675, 1771
BtsI	GCAGTG	1 cut(s)	678
BtsIMutI	CAGTG	2 cut(s)	678, 903
BveI	ACCTGC	2 cut(s)	328, 1348
Cac8I	GCNNGC	6 cut(s)	6, 10, 300, 304, 308, 1284
CaiI	CAGNNNCTG	1 cut(s)	1853
CciI	TCATGA	2 cut(s)	1501, 2094
CfoI	GCGC	3 cut(s)	286, 391, 1699
Cfr10I	RCCGGY	5 cut(s)	36, 180, 298, 853, 1699
Cfr13I	GGNCC	5 cut(s)	58, 130, 528, 1221, 1280
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	2 cut(s)	260, 1764
Csp6I	GTAC	5 cut(s)	34, 427, 511, 1095, 1982
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	8 cut(s)	49, 107, 617, 1349, 1502, 1612, 1631, 2095
CviQI	GTAC	5 cut(s)	34, 427, 511, 1095, 1982
DdeI	CTNAG	4 cut(s)	585, 825, 1090, 1476
DpnI	GATC	8 cut(s)	80, 360, 987, 1048, 1128, 1500, 1940, 1992
DpnII	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
EaeI	YGGCCR	5 cut(s)	103, 178, 315, 1915, 2111
EagI	CGGCCG	1 cut(s)	178
Eam1104I	CTCTTC	2 cut(s)	427, 1325
EarI	CTCTTC	2 cut(s)	427, 1325
EciI	GGCGGA	4 cut(s)	204, 274, 284, 394
Ecl136II	GAGCTC	1 cut(s)	702
EclXI	CGGCCG	1 cut(s)	178
Eco130I	CCWWGG	4 cut(s)	48, 106, 627, 933
Eco147I	AGGCCT	1 cut(s)	1823
Eco24I	GRGCYC	4 cut(s)	95, 627, 704, 768
Eco32I	GATATC	1 cut(s)	1906
Eco47I	GGWCC	3 cut(s)	58, 130, 1221
Eco52I	CGGCCG	1 cut(s)	178
Eco53kI	GAGCTC	1 cut(s)	702
Eco57I	CTGAAG	3 cut(s)	756, 1833, 1962
Eco81I	CCTNAGG	1 cut(s)	1090
EcoICRI	GAGCTC	1 cut(s)	702
EcoO109I	RGGNCCY	1 cut(s)	1221
EcoRI	GAATTC	1 cut(s)	948
EcoRII	CCWGG	1 cut(s)	2102
EcoRV	GATATC	1 cut(s)	1906
EcoT14I	CCWWGG	4 cut(s)	48, 106, 627, 933
EcoT38I	GRGCYC	4 cut(s)	95, 627, 704, 768
ErhI	CCWWGG	4 cut(s)	48, 106, 627, 933
Esp3I	CGTCTC	1 cut(s)	677
FaeI	CATG	8 cut(s)	52, 110, 620, 1352, 1505, 1615, 1634, 2098
FaqI	GGGAC	7 cut(s)	251, 565, 745, 1207, 1864, 2050, 2085
FatI	CATG	8 cut(s)	48, 106, 616, 1348, 1501, 1611, 1630, 2094
FauI	CCCGC	3 cut(s)	17, 500, 2127
FauNDI	CATATG	1 cut(s)	363
FbaI	TGATCA	2 cut(s)	358, 1498
FblI	GTMKAC	1 cut(s)	1753
FokI	GGATG	6 cut(s)	274, 467, 608, 680, 1682, 1778
FriOI	GRGCYC	4 cut(s)	95, 627, 704, 768
FspBI	CTAG	4 cut(s)	945, 969, 1868, 1899
GlaI	GCGC	3 cut(s)	285, 390, 1698
GsaI	CCCAGC	1 cut(s)	1955
HaeII	RGCGCY	2 cut(s)	392, 1700
HaeIII	GGCC	9 cut(s)	105, 180, 317, 529, 869, 1282, 1823, 1917, 2113
HgaI	GACGC	2 cut(s)	260, 1764
HhaI	GCGC	3 cut(s)	286, 391, 1699
Hin1I	GRCGYC	3 cut(s)	252, 383, 1756
Hin1II	CATG	8 cut(s)	52, 110, 620, 1352, 1505, 1615, 1634, 2098
Hin6I	GCGC	3 cut(s)	284, 389, 1697
HinP1I	GCGC	3 cut(s)	284, 389, 1697
HphI	GGTGA	6 cut(s)	131, 368, 787, 827, 1337, 2087
Hpy166II	GTNNAC	1 cut(s)	1754
Hpy8I	GTNNAC	1 cut(s)	1754
Hpy99I	CGWCG	2 cut(s)	388, 1021
HpyAV	CCTTC	7 cut(s)	432, 682, 731, 787, 973, 1834, 2101
HpyCH4III	ACNGT	3 cut(s)	62, 1073, 1805
HpyCH4IV	ACGT	2 cut(s)	383, 1016
HpyF3I	CTNAG	4 cut(s)	585, 825, 1090, 1476
HpySE526I	ACGT	2 cut(s)	383, 1016
Hsp92I	GRCGYC	3 cut(s)	252, 383, 1756
Hsp92II	CATG	8 cut(s)	52, 110, 620, 1352, 1505, 1615, 1634, 2098
HspAI	GCGC	3 cut(s)	284, 389, 1697
KpnI	GGTACC	2 cut(s)	37, 1098
KroI	GCCGGC	1 cut(s)	298
KroNI	GCCGGC	1 cut(s)	300
Ksp22I	TGATCA	2 cut(s)	358, 1498
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
LmnI	GCTCC	4 cut(s)	622, 763, 1544, 2107
Lsp1109I	GCAGC	3 cut(s)	346, 1591, 1706
LweI	GCATC	2 cut(s)	658, 1615
MaeI	CTAG	4 cut(s)	945, 969, 1868, 1899
MaeII	ACGT	2 cut(s)	383, 1016
MaeIII	GTNAC	1 cut(s)	1724
MalI	GATC	8 cut(s)	80, 360, 987, 1048, 1128, 1500, 1940, 1992
MbiI	CCGCTC	1 cut(s)	2110
MboI	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
MboII	GAAGA	9 cut(s)	340, 444, 573, 1342, 1355, 1696, 1826, 1968, 2012
MflI	RGATCY	2 cut(s)	78, 1990
MhlI	GDGCHC	4 cut(s)	95, 627, 704, 768
MlsI	TGGCCA	1 cut(s)	1917
MluNI	TGGCCA	1 cut(s)	1917
MlyI	GAGTC	5 cut(s)	1157, 1409, 1645, 2032, 2107
MmeI	TCCRAC	5 cut(s)	56, 498, 730, 1434, 1905
Mox20I	TGGCCA	1 cut(s)	1917
MroNI	GCCGGC	1 cut(s)	298
MroXI	GAANNNNTTC	5 cut(s)	191, 409, 1272, 1386, 1522
MscI	TGGCCA	1 cut(s)	1917
MseI	TTAA	5 cut(s)	864, 1248, 1314, 1605, 2087
MslI	CAYNNNNRTG	2 cut(s)	53, 245
Msp20I	TGGCCA	1 cut(s)	1917
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 256, 500, 526, 2104
Mva1269I	GAATGC	1 cut(s)	655
MvaI	CCWGG	1 cut(s)	2104
MvnI	CGCG	3 cut(s)	102, 171, 229
NaeI	GCCGGC	1 cut(s)	300
NciI	CCSGG	4 cut(s)	24, 256, 500, 526
NcoI	CCATGG	2 cut(s)	48, 106
NdeI	CATATG	1 cut(s)	363
NdeII	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
NgoMIV	GCCGGC	1 cut(s)	298
NlaIII	CATG	8 cut(s)	52, 110, 620, 1352, 1505, 1615, 1634, 2098
NlaIV	GGNNCC	8 cut(s)	35, 132, 497, 624, 765, 939, 1096, 1223
NmeAIII	GCCGAG	3 cut(s)	735, 895, 935
PagI	TCATGA	2 cut(s)	1501, 2094
PaqCI	CACCTGC	1 cut(s)	1348
PasI	CCCWGGG	1 cut(s)	2103
PceI	AGGCCT	1 cut(s)	1823
PctI	GAATGC	1 cut(s)	655
PdiI	GCCGGC	1 cut(s)	300
PdmI	GAANNNNTTC	5 cut(s)	191, 409, 1272, 1386, 1522
PfeI	GAWTC	5 cut(s)	599, 677, 1273, 1523, 2054
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	5 cut(s)	1156, 1408, 1644, 2032, 2106
PpsI	GAGTC	5 cut(s)	1156, 1408, 1644, 2032, 2106
PpuMI	RGGWCCY	1 cut(s)	1221
PshAI	GACNNNNGTC	1 cut(s)	1029
Psp124BI	GAGCTC	1 cut(s)	704
Psp5II	RGGWCCY	1 cut(s)	1221
Psp6I	CCWGG	1 cut(s)	2102
PspFI	CCCAGC	1 cut(s)	1951
PspGI	CCWGG	1 cut(s)	2102
PspN4I	GGNNCC	8 cut(s)	35, 132, 497, 624, 765, 939, 1096, 1223
PspPI	GGNCC	5 cut(s)	58, 130, 528, 1221, 1280
PspPPI	RGGWCCY	1 cut(s)	1221
PstNI	CAGNNNCTG	1 cut(s)	1853
PsuI	RGATCY	2 cut(s)	78, 1990
RsaI	GTAC	5 cut(s)	35, 428, 512, 1096, 1983
RsaNI	GTAC	5 cut(s)	34, 427, 511, 1095, 1982
RseI	CAYNNNNRTG	2 cut(s)	53, 245
SacI	GAGCTC	1 cut(s)	704
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	5 cut(s)	864, 1248, 1314, 1605, 2087
Sau3AI	GATC	8 cut(s)	78, 358, 985, 1046, 1126, 1498, 1938, 1990
Sau96I	GGNCC	5 cut(s)	58, 130, 528, 1221, 1280
SchI	GAGTC	5 cut(s)	1157, 1409, 1645, 2032, 2107
ScrFI	CCNGG	5 cut(s)	24, 256, 500, 526, 2104
SduI	GDGCHC	4 cut(s)	95, 627, 704, 768
SfaNI	GCATC	2 cut(s)	658, 1615
Sfr303I	CCGCGG	1 cut(s)	103
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	3 cut(s)	58, 130, 1221
SmiMI	CAYNNNNRTG	2 cut(s)	53, 245
SmlI	CTYRAG	1 cut(s)	1053
SmoI	CTYRAG	1 cut(s)	1053
SseBI	AGGCCT	1 cut(s)	1823
SspMI	CTAG	4 cut(s)	945, 969, 1868, 1899
SstI	GAGCTC	1 cut(s)	704
StuI	AGGCCT	1 cut(s)	1823
StyD4I	CCNGG	5 cut(s)	22, 254, 498, 524, 2102
StyI	CCWWGG	4 cut(s)	48, 106, 627, 933
TaaI	ACNGT	3 cut(s)	62, 1073, 1805
TaiI	ACGT	2 cut(s)	386, 1019
TaqI	TCGA	5 cut(s)	185, 704, 1065, 1560, 1599
TfiI	GAWTC	5 cut(s)	599, 677, 1273, 1523, 2054
Tru1I	TTAA	5 cut(s)	864, 1248, 1314, 1605, 2087
Tru9I	TTAA	5 cut(s)	864, 1248, 1314, 1605, 2087
TscAI	CASTG	2 cut(s)	678, 910
TseI	GCWGC	3 cut(s)	334, 1579, 1694
TspDTI	ATGAA	5 cut(s)	806, 834, 1275, 1584, 2083
TspGWI	ACGGA	2 cut(s)	1440, 1682
TspRI	CASTG	2 cut(s)	678, 910
VpaK11BI	GGWCC	3 cut(s)	58, 130, 1221
XapI	RAATTY	6 cut(s)	926, 948, 1168, 1419, 1551, 1856
XbaI	TCTAGA	1 cut(s)	1867
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1925
XmiI	GTMKAC	1 cut(s)	1753
XmnI	GAANNNNTTC	5 cut(s)	191, 409, 1272, 1386, 1522
XspI	CTAG	4 cut(s)	945, 969, 1868, 1899
ZraI	GACGTC	1 cut(s)	384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.