Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Forward (+)

80388747 .. 80393428

Gene Structure 4682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34926

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGCACGCGCGCCACCGCAATCCCGGAAATGGGTACCGGTCTAATTCCATGGGTATGGACCGTATCGGAATGGGTCGGATCTCGCCGGAGGGCTCACTCCGCGGCCATGGCTATTACAACAACAACTCCGACCCCCCTCACCGCAACAACAACAACAACAACAGCTTCAATCGCGGCTTCGGCCGGTCGAAATCTTTCCAGCCGCCGCCACCTCCGCCGCCGCCGGCGGCTCCGCCGCGAAAGGGGGACGTCTTTATGGACGCGGGCCGGATGGCGGCGGAGTATCTGGTGGCGCAGGGGCTGCTGCCGGCGAGCGTGCTGTCGGCAAAGTGGCAGAAGAAGCAGCAGGTAGAGTTTGAGGGTGATCACATGAGAGAGGAGGGGAGGACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGAGGGAGGAGGGTACAGAAGAGGAAGGTTTGGAGGTGTGGATGAGTTCAGTAGTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGCGGCGGGTATGGGTCGGATACCCGGCCCGATTGGTATGGGAGGAGTGGGACGTTTTCGGATAGGCATAGTAGGGCTTCTTCTGAGTGTGAGGATGATTCTGCTTCTGGGAGGCATGAGGAGCACAAGGTGGGGAGAGATGTTGGGAATGCAAGGGAGAGTGAGGATGCAGTGGATTCGGAGACAAAGGAGGATATGAGCTCGAAGCCGAGTTCTTCTGGTGCAAATGGGAGTGACGGAGTTGTTGTTGGAGTAAATGTGGAGCCCAACAAGGTGAATGATGTAGAGATGAAGGATAAGGATTGTGGCAATGGTGATGAAACTGAGAAACAGAGTGTTGTGGAGGAGTTGCCGGCTCAGGTTAAGGCCGATGGAGAGGGGGATTTGGGTGGTAGGAATGGCACTGATTTGTTGAAACTATGCAAATTCGCCAAGGTGCCTACTAGAATTCGCTCGGCATTGACTACTAGGGGTTTGAAGGTTGATCCACTTCCAATTATCCAAGAGGGAAGCACGTTGTCTGACATTGGTCTGCAACCGGGAGGATCATCTCAAGGTTTAATCGAAAACCGTTCTCTTGATGTTGCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGTTGATCCTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATTAGGTTCTGGATTTGGTATTGAGCAGAATAAGTTTGAAAGGTCCCAGTCATTACCAGATAGAGCTTTTAAGCGTGAGAATGAACAAGAATTGATTCAAGGGCCAGCAGGGCTTAGGAGTTTTAGCTTTGCAGTTAAGGAAAGAGGTGAGAAGAGGGCTTTAGAAGATCATGATAAGCAGGTGGAAGCAAAAAAACCAAGAGAATGGCGTCCCTACGCAGAGTCAGATGATTGTTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCATTGGAGGACAACACTTCTCCTGCTGAGAAAGTGATTGTAGCTGTTGATCATGACAGCTCAATGGGAAATGATTCCCAGTTCCGAAAAGATGGAGCTGAAATTTGTGTCGATTATATGCAAGAGAAGCAGCTTTTTCCTAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAGTCGTGATAGTAATTCTGTAATAAACTACACGGATGTCTCTGGAGTGAAAAAAGAAGCAGCGCCGGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAGAGCAGTAGACGCCCTGTGGATGTCAAAGGGATAGAAGTAATTGATTTAGAAAATGACTCTATTCCTGAAGACAAGGCCTTCAATAATGCGGAAAGAAAGACAGGGGCTGAATTTATACCTCTAGATGGCTTTTCCAACCAACCACAGAACTCTAGTGATATCCCCGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAGTTGCTGGGAAATGATTTCCCTACTTGTTCTTCAGTACCGGAGGATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGCAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGCGAAATACCATTAACCTTCATGAGTCCCTGGGAGCAGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

716

Amino Acids

78.35

Weight (kDa)

4.89

Isoelectric Point (pI)

54.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1354
AatII	GACGTC	2 cut(s)	252, 392
Acc36I	ACCTGC	2 cut(s)	337, 1354
Acc65I	GGTACC	2 cut(s)	33, 1100
AccB1I	GGYRCC	3 cut(s)	33, 943, 1100
AccI	GTMKAC	1 cut(s)	1759
AccII	CGCG	6 cut(s)	8, 10, 102, 174, 238, 263
AclWI	GGATC	5 cut(s)	86, 986, 1060, 1127, 2004
AcoI	YGGCCR	3 cut(s)	103, 181, 1921
AcsI	RAATTY	6 cut(s)	932, 954, 1174, 1425, 1557, 1862
AcuI	CTGAAG	2 cut(s)	1839, 1968
AcyI	GRCGYC	4 cut(s)	249, 389, 1393, 1762
AdeI	CACNNNGTG	1 cut(s)	637
AfaI	GTAC	4 cut(s)	35, 434, 1102, 1989
AfiI	CCNNNNNNNGG	5 cut(s)	29, 30, 242, 274, 1877
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	169, 922, 985, 1223, 1283, 1834, 2064
AjnI	CCWGG	1 cut(s)	2108
AluBI	AGCT	8 cut(s)	165, 708, 1250, 1311, 1499, 1515, 1553, 1588
AluI	AGCT	8 cut(s)	165, 708, 1250, 1311, 1499, 1515, 1553, 1588
Alw21I	GWGCWC	2 cut(s)	633, 710
Alw26I	GTCTC	3 cut(s)	683, 1684, 1749
AlwI	GGATC	5 cut(s)	86, 986, 1060, 1127, 2004
AlwNI	CAGNNNCTG	2 cut(s)	301, 1859
AoxI	GGCC	8 cut(s)	103, 181, 265, 533, 873, 1286, 1827, 1921
ApeKI	GCWGC	6 cut(s)	301, 304, 343, 1585, 1700, 2116
ApoI	RAATTY	6 cut(s)	932, 954, 1174, 1425, 1557, 1862
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	4 cut(s)	194, 415, 1278, 1528
Asp718I	GGTACC	2 cut(s)	33, 1100
AspLEI	GCGC	5 cut(s)	10, 12, 295, 397, 1705
AspS9I	GGNCC	5 cut(s)	58, 265, 534, 1227, 1286
AsuC2I	CCSGG	4 cut(s)	24, 506, 532, 1047
AsuHPI	GGTGA	5 cut(s)	131, 374, 793, 833, 1343
AvaII	GGWCC	2 cut(s)	58, 1227
AxyI	CCTNAGG	1 cut(s)	1096
BaeI	ACNNNNGTAYC	2 cut(s)	1092, 1125
BalI	TGGCCA	1 cut(s)	1923
BanI	GGYRCC	3 cut(s)	33, 943, 1100
BanII	GRGCYC	3 cut(s)	95, 710, 774
BarI	GAAGNNNNNNTAC	2 cut(s)	571, 603
BauI	CACGAG	1 cut(s)	1746
BbsI	GAAGAC	2 cut(s)	1827, 2018
Bbv12I	GWGCWC	2 cut(s)	633, 710
BbvI	GCAGC	6 cut(s)	288, 291, 355, 1597, 1712, 2128
BccI	CCATC	6 cut(s)	265, 872, 1541, 1871, 1913, 1922
BcgI	CGANNNNNNTGC	2 cut(s)	666, 700
BciT130I	CCWGG	1 cut(s)	2110
BciVI	GTATCC	1 cut(s)	520
BclI	TGATCA	2 cut(s)	364, 1504
BcnI	CCSGG	4 cut(s)	24, 506, 532, 1047
BcoDI	GTCTC	3 cut(s)	683, 1684, 1749
BfaI	CTAG	4 cut(s)	951, 975, 1874, 1905
BfoI	RGCGCY	2 cut(s)	398, 1706
BfuAI	ACCTGC	2 cut(s)	337, 1354
BfuI	GTATCC	1 cut(s)	520
BglI	GCCNNNNNGGC	1 cut(s)	1294
Bme1390I	CCNGG	5 cut(s)	24, 506, 532, 1047, 2110
Bme18I	GGWCC	2 cut(s)	58, 1227
BmgT120I	GGNCC	5 cut(s)	58, 265, 534, 1227, 1286
BmiI	GGNNCC	7 cut(s)	35, 231, 503, 771, 945, 1102, 1229
BmrFI	CCNGG	5 cut(s)	24, 506, 532, 1047, 2110
BmrI	ACTGGG	3 cut(s)	1100, 1225, 1528
BmsI	GCATC	2 cut(s)	664, 1621
BmuI	ACTGGG	3 cut(s)	1100, 1225, 1528
BoxI	GACNNNNGTC	1 cut(s)	1035
BpiI	GAAGAC	2 cut(s)	1827, 2018
BpmI	CTGGAG	1 cut(s)	1704
Bpu10I	CCTNAGC	2 cut(s)	864, 1298
BpuEI	CTTGAG	1 cut(s)	1044
BpuMI	CCSGG	4 cut(s)	24, 506, 532, 1047
BsaHI	GRCGYC	4 cut(s)	249, 389, 1393, 1762
BsaJI	CCNNGG	7 cut(s)	48, 100, 106, 505, 939, 2108, 2109
BsaWI	WCCGGW	2 cut(s)	36, 1990
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 140, 738, 750, 768, 780
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 30, 242, 274, 1877
Bse118I	RCCGGY	6 cut(s)	36, 183, 223, 307, 859, 1705
Bse1I	ACTGG	4 cut(s)	1106, 1158, 1231, 1534
Bse21I	CCTNAGG	1 cut(s)	1096
Bse3DI	GCAATG	1 cut(s)	823
BseBI	CCWGG	1 cut(s)	2110
BseDI	CCNNGG	7 cut(s)	48, 100, 106, 505, 939, 2108, 2109
BseGI	GGATG	6 cut(s)	276, 466, 607, 679, 1681, 1777
BseLI	CCNNNNNNNGG	5 cut(s)	29, 30, 242, 274, 1877
BseMI	GCAATG	1 cut(s)	823
BseMII	CTCAG	5 cut(s)	582, 822, 878, 1110, 1473
BseNI	ACTGG	4 cut(s)	1106, 1158, 1231, 1534
BsePI	GCGCGC	1 cut(s)	8
BseRI	GAGGAG	7 cut(s)	392, 441, 508, 511, 565, 641, 866
BseX3I	CGGCCG	1 cut(s)	181
BseXI	GCAGC	6 cut(s)	288, 291, 355, 1597, 1712, 2128
BseYI	CCCAGC	1 cut(s)	1957
Bsh1236I	CGCG	6 cut(s)	8, 10, 102, 174, 238, 263
Bsh1285I	CGRYCG	2 cut(s)	184, 188
BshFI	GGCC	8 cut(s)	105, 183, 267, 535, 875, 1288, 1829, 1923
BshNI	GGYRCC	3 cut(s)	33, 943, 1100
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	2 cut(s)	184, 188
BsiHKAI	GWGCWC	2 cut(s)	633, 710
BslFI	GGGAC	6 cut(s)	260, 571, 1213, 1380, 2056, 2091
BslI	CCNNNNNNNGG	5 cut(s)	29, 30, 242, 274, 1877
BsmAI	GTCTC	3 cut(s)	683, 1684, 1749
BsmFI	GGGAC	6 cut(s)	260, 571, 1213, 1380, 2056, 2091
BsmI	GAATGC	1 cut(s)	661
BsnI	GGCC	8 cut(s)	105, 183, 267, 535, 875, 1288, 1829, 1923
Bsp1286I	GDGCHC	4 cut(s)	95, 633, 710, 774
Bsp143I	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	8 cut(s)	105, 183, 267, 535, 875, 1288, 1829, 1923
BspCNI	CTCAG	5 cut(s)	583, 823, 877, 1109, 1474
BspFNI	CGCG	6 cut(s)	8, 10, 102, 174, 238, 263
BspHI	TCATGA	3 cut(s)	1354, 1507, 2100
BspLI	GGNNCC	7 cut(s)	35, 231, 503, 771, 945, 1102, 1229
BspMI	ACCTGC	2 cut(s)	337, 1354
BspPI	GGATC	5 cut(s)	86, 986, 1060, 1127, 2004
BspT107I	GGYRCC	3 cut(s)	33, 943, 1100
BsrDI	GCAATG	1 cut(s)	823
BsrFI	RCCGGY	6 cut(s)	36, 183, 223, 307, 859, 1705
BsrI	ACTGG	4 cut(s)	1106, 1158, 1231, 1534
BssAI	RCCGGY	6 cut(s)	36, 183, 223, 307, 859, 1705
BssECI	CCNNGG	7 cut(s)	48, 100, 106, 505, 939, 2108, 2109
BssHII	GCGCGC	1 cut(s)	8
BssMI	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
BssNI	GRCGYC	4 cut(s)	249, 389, 1393, 1762
BssSI	CACGAG	1 cut(s)	1746
BssT1I	CCWWGG	3 cut(s)	48, 106, 939
Bst2BI	CACGAG	1 cut(s)	1746
Bst2UI	CCWGG	1 cut(s)	2110
Bst4CI	ACNGT	2 cut(s)	62, 1079
Bst6I	CTCTTC	2 cut(s)	433, 1331
BstACI	GRCGYC	4 cut(s)	249, 389, 1393, 1762
BstAPI	GCANNNNNTGC	1 cut(s)	301
BstC8I	GCNNGC	9 cut(s)	6, 10, 225, 265, 309, 313, 317, 861, 1290
BstDEI	CTNAG	6 cut(s)	591, 831, 864, 1096, 1298, 1482
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	6 cut(s)	276, 466, 607, 679, 1681, 1777
BstFNI	CGCG	6 cut(s)	8, 10, 102, 174, 238, 263
BstH2I	RGCGCY	2 cut(s)	398, 1706
BstHHI	GCGC	5 cut(s)	10, 12, 295, 397, 1705
BstKTI	GATC	9 cut(s)	81, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
BstMAI	GTCTC	3 cut(s)	683, 1684, 1749
BstMBI	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
BstMCI	CGRYCG	2 cut(s)	184, 188
BstNI	CCWGG	1 cut(s)	2110
BstPAI	GACNNNNGTC	1 cut(s)	1035
BstSCI	CCNGG	5 cut(s)	22, 504, 530, 1045, 2108
BstUI	CGCG	6 cut(s)	8, 10, 102, 174, 238, 263
BstV1I	GCAGC	6 cut(s)	288, 291, 355, 1597, 1712, 2128
BstV2I	GAAGAC	2 cut(s)	1827, 2018
BstX2I	RGATCY	2 cut(s)	78, 1996
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1389
BstYI	RGATCY	2 cut(s)	78, 1996
BstZI	CGGCCG	1 cut(s)	181
Bsu36I	CCTNAGG	1 cut(s)	1096
BsuI	GTATCC	1 cut(s)	520
BsuRI	GGCC	8 cut(s)	105, 183, 267, 535, 875, 1288, 1829, 1923
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1644
BtsCI	GGATG	6 cut(s)	276, 466, 607, 679, 1681, 1777
BtsI	GCAGTG	1 cut(s)	684
BtsIMutI	CAGTG	2 cut(s)	684, 909
BveI	ACCTGC	2 cut(s)	337, 1354
Cac8I	GCNNGC	9 cut(s)	6, 10, 225, 265, 309, 313, 317, 861, 1290
CaiI	CAGNNNCTG	2 cut(s)	301, 1859
CciI	TCATGA	3 cut(s)	1354, 1507, 2100
CfoI	GCGC	5 cut(s)	10, 12, 295, 397, 1705
Cfr10I	RCCGGY	6 cut(s)	36, 183, 223, 307, 859, 1705
Cfr13I	GGNCC	5 cut(s)	58, 265, 534, 1227, 1286
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	3 cut(s)	269, 1382, 1770
Csp6I	GTAC	4 cut(s)	34, 433, 1101, 1988
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	9 cut(s)	49, 107, 370, 623, 1355, 1508, 1618, 1637, 2101
CviQI	GTAC	4 cut(s)	34, 433, 1101, 1988
DdeI	CTNAG	6 cut(s)	591, 831, 864, 1096, 1298, 1482
DpnI	GATC	9 cut(s)	80, 366, 993, 1054, 1134, 1353, 1506, 1946, 1998
DpnII	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
DraIII	CACNNNGTG	1 cut(s)	637
EaeI	YGGCCR	3 cut(s)	103, 181, 1921
EagI	CGGCCG	1 cut(s)	181
Eam1104I	CTCTTC	2 cut(s)	433, 1331
EarI	CTCTTC	2 cut(s)	433, 1331
EciI	GGCGGA	3 cut(s)	204, 222, 293
Ecl136II	GAGCTC	1 cut(s)	708
EclXI	CGGCCG	1 cut(s)	181
Eco130I	CCWWGG	3 cut(s)	48, 106, 939
Eco147I	AGGCCT	1 cut(s)	1829
Eco24I	GRGCYC	3 cut(s)	95, 710, 774
Eco32I	GATATC	1 cut(s)	1912
Eco47I	GGWCC	2 cut(s)	58, 1227
Eco52I	CGGCCG	1 cut(s)	181
Eco53kI	GAGCTC	1 cut(s)	708
Eco57I	CTGAAG	2 cut(s)	1839, 1968
Eco81I	CCTNAGG	1 cut(s)	1096
EcoICRI	GAGCTC	1 cut(s)	708
EcoO109I	RGGNCCY	1 cut(s)	1227
EcoRI	GAATTC	1 cut(s)	954
EcoRII	CCWGG	1 cut(s)	2108
EcoRV	GATATC	1 cut(s)	1912
EcoT14I	CCWWGG	3 cut(s)	48, 106, 939
EcoT38I	GRGCYC	3 cut(s)	95, 710, 774
ErhI	CCWWGG	3 cut(s)	48, 106, 939
FaeI	CATG	9 cut(s)	52, 110, 373, 626, 1358, 1511, 1621, 1640, 2104
FaqI	GGGAC	6 cut(s)	260, 571, 1213, 1380, 2056, 2091
FatI	CATG	9 cut(s)	48, 106, 369, 622, 1354, 1507, 1617, 1636, 2100
FauI	CCCGC	3 cut(s)	256, 506, 2133
FbaI	TGATCA	2 cut(s)	364, 1504
FblI	GTMKAC	1 cut(s)	1759
FokI	GGATG	6 cut(s)	283, 473, 614, 686, 1688, 1784
FriOI	GRGCYC	3 cut(s)	95, 710, 774
FspBI	CTAG	4 cut(s)	951, 975, 1874, 1905
GlaI	GCGC	5 cut(s)	9, 11, 294, 396, 1704
GsaI	CCCAGC	1 cut(s)	1961
GsuI	CTGGAG	1 cut(s)	1704
HaeII	RGCGCY	2 cut(s)	398, 1706
HaeIII	GGCC	8 cut(s)	105, 183, 267, 535, 875, 1288, 1829, 1923
HgaI	GACGC	3 cut(s)	269, 1382, 1770
HhaI	GCGC	5 cut(s)	10, 12, 295, 397, 1705
Hin1I	GRCGYC	4 cut(s)	249, 389, 1393, 1762
Hin1II	CATG	9 cut(s)	52, 110, 373, 626, 1358, 1511, 1621, 1640, 2104
Hin6I	GCGC	5 cut(s)	8, 10, 293, 395, 1703
HinP1I	GCGC	5 cut(s)	8, 10, 293, 395, 1703
HphI	GGTGA	5 cut(s)	131, 374, 793, 833, 1343
Hpy166II	GTNNAC	1 cut(s)	1760
Hpy8I	GTNNAC	1 cut(s)	1760
Hpy99I	CGWCG	1 cut(s)	394
HpyAV	CCTTC	5 cut(s)	438, 793, 979, 1840, 2107
HpyCH4III	ACNGT	2 cut(s)	62, 1079
HpyCH4IV	ACGT	4 cut(s)	249, 389, 560, 1022
HpyF3I	CTNAG	6 cut(s)	591, 831, 864, 1096, 1298, 1482
HpySE526I	ACGT	4 cut(s)	249, 389, 560, 1022
Hsp92I	GRCGYC	4 cut(s)	249, 389, 1393, 1762
Hsp92II	CATG	9 cut(s)	52, 110, 373, 626, 1358, 1511, 1621, 1640, 2104
HspAI	GCGC	5 cut(s)	8, 10, 293, 395, 1703
KpnI	GGTACC	2 cut(s)	37, 1104
KroI	GCCGGC	3 cut(s)	223, 307, 859
KroNI	GCCGGC	3 cut(s)	225, 309, 861
Ksp22I	TGATCA	2 cut(s)	364, 1504
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
LmnI	GCTCC	5 cut(s)	235, 628, 769, 1550, 2113
Lsp1109I	GCAGC	6 cut(s)	288, 291, 355, 1597, 1712, 2128
LweI	GCATC	2 cut(s)	664, 1621
MaeI	CTAG	4 cut(s)	951, 975, 1874, 1905
MaeII	ACGT	4 cut(s)	249, 389, 560, 1022
MaeIII	GTNAC	2 cut(s)	740, 1730
MalI	GATC	9 cut(s)	80, 366, 993, 1054, 1134, 1353, 1506, 1946, 1998
MboI	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
MboII	GAAGA	9 cut(s)	349, 450, 579, 714, 1348, 1361, 1832, 1974, 2018
MflI	RGATCY	2 cut(s)	78, 1996
MhlI	GDGCHC	4 cut(s)	95, 633, 710, 774
MlsI	TGGCCA	1 cut(s)	1923
MluNI	TGGCCA	1 cut(s)	1923
MlyI	GAGTC	6 cut(s)	1163, 1415, 1651, 1802, 2038, 2113
MmeI	TCCRAC	5 cut(s)	56, 153, 504, 736, 1911
Mox20I	TGGCCA	1 cut(s)	1923
MreI	CGCCGGCG	1 cut(s)	223
MroNI	GCCGGC	3 cut(s)	223, 307, 859
MroXI	GAANNNNTTC	4 cut(s)	194, 415, 1278, 1528
MscI	TGGCCA	1 cut(s)	1923
MseI	TTAA	6 cut(s)	870, 1067, 1254, 1320, 1611, 2093
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1923
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 506, 532, 1047, 2110
Mva1269I	GAATGC	1 cut(s)	661
MvaI	CCWGG	1 cut(s)	2110
MvnI	CGCG	6 cut(s)	8, 10, 102, 174, 238, 263
NaeI	GCCGGC	3 cut(s)	225, 309, 861
NciI	CCSGG	4 cut(s)	24, 506, 532, 1047
NcoI	CCATGG	2 cut(s)	48, 106
NdeII	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
NgoMIV	GCCGGC	3 cut(s)	223, 307, 859
NlaIII	CATG	9 cut(s)	52, 110, 373, 626, 1358, 1511, 1621, 1640, 2104
NlaIV	GGNNCC	7 cut(s)	35, 231, 503, 771, 945, 1102, 1229
NmeAIII	GCCGAG	2 cut(s)	741, 941
NmuCI	GTSAC	1 cut(s)	740
PagI	TCATGA	3 cut(s)	1354, 1507, 2100
PaqCI	CACCTGC	1 cut(s)	1354
PasI	CCCWGGG	1 cut(s)	2109
PauI	GCGCGC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	1829
PctI	GAATGC	1 cut(s)	661
PdiI	GCCGGC	3 cut(s)	225, 309, 861
PdmI	GAANNNNTTC	4 cut(s)	194, 415, 1278, 1528
PfeI	GAWTC	5 cut(s)	605, 683, 1279, 1529, 2060
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	6 cut(s)	1162, 1414, 1650, 1802, 2038, 2112
PpsI	GAGTC	6 cut(s)	1162, 1414, 1650, 1802, 2038, 2112
PpuMI	RGGWCCY	1 cut(s)	1227
PshAI	GACNNNNGTC	1 cut(s)	1035
Psp124BI	GAGCTC	1 cut(s)	710
Psp5II	RGGWCCY	1 cut(s)	1227
Psp6I	CCWGG	1 cut(s)	2108
PspFI	CCCAGC	1 cut(s)	1957
PspGI	CCWGG	1 cut(s)	2108
PspN4I	GGNNCC	7 cut(s)	35, 231, 503, 771, 945, 1102, 1229
PspPI	GGNCC	5 cut(s)	58, 265, 534, 1227, 1286
PspPPI	RGGWCCY	1 cut(s)	1227
PstNI	CAGNNNCTG	2 cut(s)	301, 1859
PsuI	RGATCY	2 cut(s)	78, 1996
PteI	GCGCGC	1 cut(s)	8
RsaI	GTAC	4 cut(s)	35, 434, 1102, 1989
RsaNI	GTAC	4 cut(s)	34, 433, 1101, 1988
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	710
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	870, 1067, 1254, 1320, 1611, 2093
Sau3AI	GATC	9 cut(s)	78, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
Sau96I	GGNCC	5 cut(s)	58, 265, 534, 1227, 1286
SchI	GAGTC	6 cut(s)	1163, 1415, 1651, 1802, 2038, 2113
ScrFI	CCNGG	5 cut(s)	24, 506, 532, 1047, 2110
SduI	GDGCHC	4 cut(s)	95, 633, 710, 774
SfaNI	GCATC	2 cut(s)	664, 1621
Sfr303I	CCGCGG	1 cut(s)	103
SgrAI	CRCCGGYG	1 cut(s)	223
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	58, 1227
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1059
SmoI	CTYRAG	1 cut(s)	1059
SseBI	AGGCCT	1 cut(s)	1829
SspMI	CTAG	4 cut(s)	951, 975, 1874, 1905
SstI	GAGCTC	1 cut(s)	710
StuI	AGGCCT	1 cut(s)	1829
StyD4I	CCNGG	5 cut(s)	22, 504, 530, 1045, 2108
StyI	CCWWGG	3 cut(s)	48, 106, 939
TaaI	ACNGT	2 cut(s)	62, 1079
TaiI	ACGT	4 cut(s)	252, 392, 563, 1025
TaqI	TCGA	5 cut(s)	188, 710, 1071, 1566, 1605
TfiI	GAWTC	5 cut(s)	605, 683, 1279, 1529, 2060
Tru1I	TTAA	6 cut(s)	870, 1067, 1254, 1320, 1611, 2093
Tru9I	TTAA	6 cut(s)	870, 1067, 1254, 1320, 1611, 2093
TscAI	CASTG	2 cut(s)	684, 916
TseFI	GTSAC	1 cut(s)	740
TseI	GCWGC	6 cut(s)	301, 304, 343, 1585, 1700, 2116
Tsp45I	GTSAC	1 cut(s)	740
TspDTI	ATGAA	5 cut(s)	812, 840, 1281, 1590, 2089
TspGWI	ACGGA	2 cut(s)	759, 1688
TspRI	CASTG	2 cut(s)	684, 916
VpaK11BI	GGWCC	2 cut(s)	58, 1227
XapI	RAATTY	6 cut(s)	932, 954, 1174, 1425, 1557, 1862
XbaI	TCTAGA	1 cut(s)	1873
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1931
XmiI	GTMKAC	1 cut(s)	1759
XmnI	GAANNNNTTC	4 cut(s)	194, 415, 1278, 1528
XspI	CTAG	4 cut(s)	951, 975, 1874, 1905
ZraI	GACGTC	2 cut(s)	250, 390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.