Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Forward (+)

79291696 .. 79295989

Gene Structure 4294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G045380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGCACGCGCGCCACCGCAATCCCGGAAATGGGTACCGGTCTAATTCCATGGGTATGGACCGTATCGGAATGGGTCGGATCTCGCCGGAGGGCTCACTCCGCGGCCATGGCTATTACAACAACAACTCCGACCCCCCTCACCGCAACAACAACAACAACAACAACAGCTTCAATCGCGGCTACGGCCGGTCGAAATCGTTCCAGCAGCCGCCGCCGCCGCCGCCGGCTCCGCCGCGAAAGGGGGACGTATTTATGGACGCGGGCCGGATGGCGGCGGAGTATCTGGTGGCGCAGGGGCTGCTGCCGGCGAGCGTGCTGTCGGCAAAGTGGCAGAAGAAGCAGCAGGTAGAGTTTGAGGGTGATCACATGAGAGAGGAGGGGAGGACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGAGGGAGGAGGGTACAGAAGAGGAAGGTTCGGGGGTGTGGATGAGTTCAGTAGTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGCGGCGGGTATGGGTCGGATACCCGGCCCGATTGGTATGGGAGGAGTGGGACGTTTTCGGATAGGCATAGTAGGGCTTCTTCTGAGTGTGAGGATGATTCTGCTTCTGGGAGGCATGAGGAGCACAAGGTGGGGAGAGATGTTGGGAATGCAAGGGAGAGTGAGGATGCAGTGGATTCGGAGACGAAGGAGGATATGAGCTCGAAGCCGAGTTCTTCTGGTGCAAATGGGAGTGACGGAGTTGTTGTTGGAGTAAATGTGGAGCCCAACAAGGTGAATGATGTAGAGATGAAGGATAAGGATTGTGGCAATGGTGATGAAACTGAGAAACAGAGTGTTGTGGAGGAGTTGCCGGCTCAGGTTAAGGCCGATGGAGAGGGGGATTTGGGTGGTAGGAATGGCACTGATTTGTTGAAACTATGCAAATTCGCCAAGGTGCCTACTAGAATTCGCTCGGCATTGACTACTAGGGGTTTGAAGGTTGATCCACTTCCAATTATCCAAGAGGGAAGCACGGCGTCTGACGTTGGTCTGCAACCGGGAGGATCATCTCAAGGTTTAATCGAAAACCGTTCTCTTGATGTTGCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGTTGATCCTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATTAGGTTCTGGATTTGGTATTGAGCAGAATAAGTTTGAAAGGTCCCAGTCATTACCAGATAGAGCTTTTAAGCGTGAGAATGAACAAGAATTGATTCAAGGGCCAGCAGGGCTTAGGAGTTTTAGCTTTGCAGGTAAGGAAAGAGGTGAGAAGAGGGCTTTAGAAGATCATGATAAGCAGGTGGAAGCAAAAAAACCAAGAGAATGGCTTCCCTACGCAGAGTCAGATGATTGTTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCATTGGAGGACAACACTTCTCCTGCTGAGAAAGTGATTGTAGCTGTTGATCATGACAGCTCAATGGGAAATGATTCCCAGTTCCGAAAAGATGGAGCTGAAATTTGTGTTGATTATATGCAAGAGAAGCAGCTTTTTCCTAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAGTCGTGATAGTAGTTCTGTAATAAACTACACAGATGTCTCTGGAGTGAAGAAAGAAGCAGCGCCGGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAGAGCAGTAGACGCCCTGTGGATGTCAAAGGGATAGAAGTAATTGATTTAGAAAATGACTCTATTCCTGAAGACAAGGCCTTCAATAATGCGGAAAGAAAGACAGGGACTGAATTTATACCTCTAGATGGCTTTTCCAACCAACCACAGAACTCTAGTGATATCCCCGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAGTTGCTGGGAAATGATTTCCCTACTTGTTCTTCAGTACCGGAGGATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGCAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGTGAAATACCATTAACCTTCATGAGTCCCTGGGAGCAGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

715

Amino Acids

78.2

Weight (kDa)

4.86

Isoelectric Point (pI)

54.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1351
AatII	GACGTC	1 cut(s)	389
Acc36I	ACCTGC	3 cut(s)	334, 1304, 1351
Acc65I	GGTACC	2 cut(s)	33, 1097
AccB1I	GGYRCC	3 cut(s)	33, 940, 1097
AccI	GTMKAC	1 cut(s)	1756
AccII	CGCG	6 cut(s)	8, 10, 102, 177, 235, 260
AclWI	GGATC	5 cut(s)	86, 983, 1057, 1124, 2001
AcoI	YGGCCR	3 cut(s)	103, 184, 1918
AcsI	RAATTY	6 cut(s)	929, 951, 1171, 1422, 1554, 1859
AcuI	CTGAAG	2 cut(s)	1836, 1965
AcyI	GRCGYC	3 cut(s)	386, 1022, 1759
AdeI	CACNNNGTG	1 cut(s)	634
AfaI	GTAC	4 cut(s)	35, 431, 1099, 1986
AfiI	CCNNNNNNNGG	5 cut(s)	29, 30, 239, 271, 1874
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	172, 919, 982, 1220, 1280, 1831, 2061
AjnI	CCWGG	1 cut(s)	2105
AluBI	AGCT	8 cut(s)	168, 705, 1247, 1308, 1496, 1512, 1550, 1585
AluI	AGCT	8 cut(s)	168, 705, 1247, 1308, 1496, 1512, 1550, 1585
Alw21I	GWGCWC	2 cut(s)	630, 707
Alw26I	GTCTC	3 cut(s)	680, 1681, 1746
AlwI	GGATC	5 cut(s)	86, 983, 1057, 1124, 2001
AlwNI	CAGNNNCTG	2 cut(s)	298, 1856
AoxI	GGCC	8 cut(s)	103, 184, 262, 530, 870, 1283, 1824, 1918
ApeKI	GCWGC	7 cut(s)	205, 298, 301, 340, 1582, 1697, 2113
ApoI	RAATTY	6 cut(s)	929, 951, 1171, 1422, 1554, 1859
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	5 cut(s)	197, 412, 1275, 1389, 1525
Asp718I	GGTACC	2 cut(s)	33, 1097
AspLEI	GCGC	5 cut(s)	10, 12, 292, 394, 1702
AspS9I	GGNCC	5 cut(s)	58, 262, 531, 1224, 1283
AsuC2I	CCSGG	4 cut(s)	24, 503, 529, 1044
AsuHPI	GGTGA	6 cut(s)	131, 371, 790, 830, 1340, 2090
AvaII	GGWCC	2 cut(s)	58, 1224
AxyI	CCTNAGG	1 cut(s)	1093
BaeI	ACNNNNGTAYC	2 cut(s)	1089, 1122
BalI	TGGCCA	1 cut(s)	1920
BanI	GGYRCC	3 cut(s)	33, 940, 1097
BanII	GRGCYC	3 cut(s)	95, 707, 771
BarI	GAAGNNNNNNTAC	2 cut(s)	568, 600
BauI	CACGAG	1 cut(s)	1743
BbsI	GAAGAC	2 cut(s)	1824, 2015
Bbv12I	GWGCWC	2 cut(s)	630, 707
BbvI	GCAGC	7 cut(s)	217, 285, 288, 352, 1594, 1709, 2125
BccI	CCATC	6 cut(s)	262, 869, 1538, 1868, 1910, 1919
BceAI	ACGGC	2 cut(s)	199, 1035
BcgI	CGANNNNNNTGC	2 cut(s)	663, 697
BciT130I	CCWGG	1 cut(s)	2107
BciVI	GTATCC	1 cut(s)	517
BclI	TGATCA	2 cut(s)	361, 1501
BcnI	CCSGG	4 cut(s)	24, 503, 529, 1044
BcoDI	GTCTC	3 cut(s)	680, 1681, 1746
BfaI	CTAG	4 cut(s)	948, 972, 1871, 1902
BfoI	RGCGCY	2 cut(s)	395, 1703
BfuAI	ACCTGC	3 cut(s)	334, 1304, 1351
BfuI	GTATCC	1 cut(s)	517
BglI	GCCNNNNNGGC	1 cut(s)	1291
Bme1390I	CCNGG	5 cut(s)	24, 503, 529, 1044, 2107
Bme18I	GGWCC	2 cut(s)	58, 1224
BmgT120I	GGNCC	5 cut(s)	58, 262, 531, 1224, 1283
BmiI	GGNNCC	7 cut(s)	35, 228, 500, 768, 942, 1099, 1226
BmrFI	CCNGG	5 cut(s)	24, 503, 529, 1044, 2107
BmrI	ACTGGG	3 cut(s)	1097, 1222, 1525
BmsI	GCATC	2 cut(s)	661, 1618
BmuI	ACTGGG	3 cut(s)	1097, 1222, 1525
BoxI	GACNNNNGTC	1 cut(s)	1032
BpiI	GAAGAC	2 cut(s)	1824, 2015
BpmI	CTGGAG	1 cut(s)	1701
Bpu10I	CCTNAGC	2 cut(s)	861, 1295
BpuEI	CTTGAG	1 cut(s)	1041
BpuMI	CCSGG	4 cut(s)	24, 503, 529, 1044
BsaHI	GRCGYC	3 cut(s)	386, 1022, 1759
BsaJI	CCNNGG	7 cut(s)	48, 100, 106, 502, 936, 2105, 2106
BsaWI	WCCGGW	2 cut(s)	36, 1987
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 140, 735, 747, 765, 777
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 30, 239, 271, 1874
Bse118I	RCCGGY	6 cut(s)	36, 186, 223, 304, 856, 1702
Bse1I	ACTGG	4 cut(s)	1103, 1155, 1228, 1531
Bse21I	CCTNAGG	1 cut(s)	1093
Bse3DI	GCAATG	1 cut(s)	820
BseBI	CCWGG	1 cut(s)	2107
BseDI	CCNNGG	7 cut(s)	48, 100, 106, 502, 936, 2105, 2106
BseGI	GGATG	5 cut(s)	273, 463, 604, 676, 1774
BseLI	CCNNNNNNNGG	5 cut(s)	29, 30, 239, 271, 1874
BseMI	GCAATG	1 cut(s)	820
BseMII	CTCAG	5 cut(s)	579, 819, 875, 1107, 1470
BseNI	ACTGG	4 cut(s)	1103, 1155, 1228, 1531
BsePI	GCGCGC	1 cut(s)	8
BseRI	GAGGAG	7 cut(s)	389, 438, 505, 508, 562, 638, 863
BseX3I	CGGCCG	1 cut(s)	184
BseXI	GCAGC	7 cut(s)	217, 285, 288, 352, 1594, 1709, 2125
BseYI	CCCAGC	1 cut(s)	1954
Bsh1236I	CGCG	6 cut(s)	8, 10, 102, 177, 235, 260
Bsh1285I	CGRYCG	2 cut(s)	187, 191
BshFI	GGCC	8 cut(s)	105, 186, 264, 532, 872, 1285, 1826, 1920
BshNI	GGYRCC	3 cut(s)	33, 940, 1097
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	2 cut(s)	187, 191
BsiHKAI	GWGCWC	2 cut(s)	630, 707
BslFI	GGGAC	6 cut(s)	257, 568, 1210, 1867, 2053, 2088
BslI	CCNNNNNNNGG	5 cut(s)	29, 30, 239, 271, 1874
BsmAI	GTCTC	3 cut(s)	680, 1681, 1746
BsmBI	CGTCTC	1 cut(s)	680
BsmFI	GGGAC	6 cut(s)	257, 568, 1210, 1867, 2053, 2088
BsmI	GAATGC	1 cut(s)	658
BsnI	GGCC	8 cut(s)	105, 186, 264, 532, 872, 1285, 1826, 1920
Bsp1286I	GDGCHC	4 cut(s)	95, 630, 707, 771
Bsp143I	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	8 cut(s)	105, 186, 264, 532, 872, 1285, 1826, 1920
BspCNI	CTCAG	5 cut(s)	580, 820, 874, 1106, 1471
BspFNI	CGCG	6 cut(s)	8, 10, 102, 177, 235, 260
BspHI	TCATGA	3 cut(s)	1351, 1504, 2097
BspLI	GGNNCC	7 cut(s)	35, 228, 500, 768, 942, 1099, 1226
BspMI	ACCTGC	3 cut(s)	334, 1304, 1351
BspPI	GGATC	5 cut(s)	86, 983, 1057, 1124, 2001
BspT107I	GGYRCC	3 cut(s)	33, 940, 1097
BsrDI	GCAATG	1 cut(s)	820
BsrFI	RCCGGY	6 cut(s)	36, 186, 223, 304, 856, 1702
BsrI	ACTGG	4 cut(s)	1103, 1155, 1228, 1531
BssAI	RCCGGY	6 cut(s)	36, 186, 223, 304, 856, 1702
BssECI	CCNNGG	7 cut(s)	48, 100, 106, 502, 936, 2105, 2106
BssHII	GCGCGC	1 cut(s)	8
BssMI	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
BssNI	GRCGYC	3 cut(s)	386, 1022, 1759
BssSI	CACGAG	1 cut(s)	1743
BssT1I	CCWWGG	3 cut(s)	48, 106, 936
Bst2BI	CACGAG	1 cut(s)	1743
Bst2UI	CCWGG	1 cut(s)	2107
Bst4CI	ACNGT	2 cut(s)	62, 1076
Bst6I	CTCTTC	2 cut(s)	430, 1328
BstACI	GRCGYC	3 cut(s)	386, 1022, 1759
BstAPI	GCANNNNNTGC	1 cut(s)	298
BstC8I	GCNNGC	9 cut(s)	6, 10, 225, 262, 306, 310, 314, 858, 1287
BstDEI	CTNAG	6 cut(s)	588, 828, 861, 1093, 1295, 1479
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	5 cut(s)	273, 463, 604, 676, 1774
BstFNI	CGCG	6 cut(s)	8, 10, 102, 177, 235, 260
BstH2I	RGCGCY	2 cut(s)	395, 1703
BstHHI	GCGC	5 cut(s)	10, 12, 292, 394, 1702
BstKTI	GATC	9 cut(s)	81, 364, 991, 1052, 1132, 1351, 1504, 1944, 1996
BstMAI	GTCTC	3 cut(s)	680, 1681, 1746
BstMBI	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
BstMCI	CGRYCG	2 cut(s)	187, 191
BstNI	CCWGG	1 cut(s)	2107
BstPAI	GACNNNNGTC	1 cut(s)	1032
BstSCI	CCNGG	5 cut(s)	22, 501, 527, 1042, 2105
BstUI	CGCG	6 cut(s)	8, 10, 102, 177, 235, 260
BstV1I	GCAGC	7 cut(s)	217, 285, 288, 352, 1594, 1709, 2125
BstV2I	GAAGAC	2 cut(s)	1824, 2015
BstX2I	RGATCY	2 cut(s)	78, 1993
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1386
BstYI	RGATCY	2 cut(s)	78, 1993
BstZI	CGGCCG	1 cut(s)	184
Bsu36I	CCTNAGG	1 cut(s)	1093
BsuI	GTATCC	1 cut(s)	517
BsuRI	GGCC	8 cut(s)	105, 186, 264, 532, 872, 1285, 1826, 1920
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1641
BtsCI	GGATG	5 cut(s)	273, 463, 604, 676, 1774
BtsI	GCAGTG	1 cut(s)	681
BtsIMutI	CAGTG	2 cut(s)	681, 906
BveI	ACCTGC	3 cut(s)	334, 1304, 1351
Cac8I	GCNNGC	9 cut(s)	6, 10, 225, 262, 306, 310, 314, 858, 1287
CaiI	CAGNNNCTG	2 cut(s)	298, 1856
CciI	TCATGA	3 cut(s)	1351, 1504, 2097
CfoI	GCGC	5 cut(s)	10, 12, 292, 394, 1702
Cfr10I	RCCGGY	6 cut(s)	36, 186, 223, 304, 856, 1702
Cfr13I	GGNCC	5 cut(s)	58, 262, 531, 1224, 1283
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	3 cut(s)	266, 1011, 1767
Csp6I	GTAC	4 cut(s)	34, 430, 1098, 1985
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	9 cut(s)	49, 107, 367, 620, 1352, 1505, 1615, 1634, 2098
CviQI	GTAC	4 cut(s)	34, 430, 1098, 1985
DdeI	CTNAG	6 cut(s)	588, 828, 861, 1093, 1295, 1479
DpnI	GATC	9 cut(s)	80, 363, 990, 1051, 1131, 1350, 1503, 1943, 1995
DpnII	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
DraIII	CACNNNGTG	1 cut(s)	634
EaeI	YGGCCR	3 cut(s)	103, 184, 1918
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	2 cut(s)	430, 1328
EarI	CTCTTC	2 cut(s)	430, 1328
EciI	GGCGGA	2 cut(s)	219, 290
Ecl136II	GAGCTC	1 cut(s)	705
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	3 cut(s)	48, 106, 936
Eco147I	AGGCCT	1 cut(s)	1826
Eco24I	GRGCYC	3 cut(s)	95, 707, 771
Eco32I	GATATC	1 cut(s)	1909
Eco47I	GGWCC	2 cut(s)	58, 1224
Eco52I	CGGCCG	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	705
Eco57I	CTGAAG	2 cut(s)	1836, 1965
Eco81I	CCTNAGG	1 cut(s)	1093
EcoICRI	GAGCTC	1 cut(s)	705
EcoO109I	RGGNCCY	1 cut(s)	1224
EcoRI	GAATTC	1 cut(s)	951
EcoRII	CCWGG	1 cut(s)	2105
EcoRV	GATATC	1 cut(s)	1909
EcoT14I	CCWWGG	3 cut(s)	48, 106, 936
EcoT38I	GRGCYC	3 cut(s)	95, 707, 771
ErhI	CCWWGG	3 cut(s)	48, 106, 936
Esp3I	CGTCTC	1 cut(s)	680
FaeI	CATG	9 cut(s)	52, 110, 370, 623, 1355, 1508, 1618, 1637, 2101
FaqI	GGGAC	6 cut(s)	257, 568, 1210, 1867, 2053, 2088
FatI	CATG	9 cut(s)	48, 106, 366, 619, 1351, 1504, 1614, 1633, 2097
FauI	CCCGC	3 cut(s)	253, 503, 2130
FbaI	TGATCA	2 cut(s)	361, 1501
FblI	GTMKAC	1 cut(s)	1756
FokI	GGATG	5 cut(s)	280, 470, 611, 683, 1781
FriOI	GRGCYC	3 cut(s)	95, 707, 771
FspBI	CTAG	4 cut(s)	948, 972, 1871, 1902
GlaI	GCGC	5 cut(s)	9, 11, 291, 393, 1701
GsaI	CCCAGC	1 cut(s)	1958
GsuI	CTGGAG	1 cut(s)	1701
HaeII	RGCGCY	2 cut(s)	395, 1703
HaeIII	GGCC	8 cut(s)	105, 186, 264, 532, 872, 1285, 1826, 1920
HgaI	GACGC	3 cut(s)	266, 1011, 1767
HhaI	GCGC	5 cut(s)	10, 12, 292, 394, 1702
Hin1I	GRCGYC	3 cut(s)	386, 1022, 1759
Hin1II	CATG	9 cut(s)	52, 110, 370, 623, 1355, 1508, 1618, 1637, 2101
Hin6I	GCGC	5 cut(s)	8, 10, 290, 392, 1700
HinP1I	GCGC	5 cut(s)	8, 10, 290, 392, 1700
HphI	GGTGA	6 cut(s)	131, 371, 790, 830, 1340, 2090
Hpy166II	GTNNAC	1 cut(s)	1757
Hpy8I	GTNNAC	1 cut(s)	1757
Hpy99I	CGWCG	1 cut(s)	391
HpyAV	CCTTC	6 cut(s)	435, 685, 790, 976, 1837, 2104
HpyCH4III	ACNGT	2 cut(s)	62, 1076
HpyCH4IV	ACGT	4 cut(s)	246, 386, 557, 1029
HpyF3I	CTNAG	6 cut(s)	588, 828, 861, 1093, 1295, 1479
HpySE526I	ACGT	4 cut(s)	246, 386, 557, 1029
Hsp92I	GRCGYC	3 cut(s)	386, 1022, 1759
Hsp92II	CATG	9 cut(s)	52, 110, 370, 623, 1355, 1508, 1618, 1637, 2101
HspAI	GCGC	5 cut(s)	8, 10, 290, 392, 1700
KpnI	GGTACC	2 cut(s)	37, 1101
KroI	GCCGGC	3 cut(s)	223, 304, 856
KroNI	GCCGGC	3 cut(s)	225, 306, 858
Ksp22I	TGATCA	2 cut(s)	361, 1501
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
LmnI	GCTCC	5 cut(s)	232, 625, 766, 1547, 2110
Lsp1109I	GCAGC	7 cut(s)	217, 285, 288, 352, 1594, 1709, 2125
LweI	GCATC	2 cut(s)	661, 1618
MaeI	CTAG	4 cut(s)	948, 972, 1871, 1902
MaeII	ACGT	4 cut(s)	246, 386, 557, 1029
MaeIII	GTNAC	2 cut(s)	737, 1727
MalI	GATC	9 cut(s)	80, 363, 990, 1051, 1131, 1350, 1503, 1943, 1995
MboI	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
MflI	RGATCY	2 cut(s)	78, 1993
MhlI	GDGCHC	4 cut(s)	95, 630, 707, 771
MlsI	TGGCCA	1 cut(s)	1920
MluNI	TGGCCA	1 cut(s)	1920
MlyI	GAGTC	6 cut(s)	1160, 1412, 1648, 1799, 2035, 2110
MmeI	TCCRAC	5 cut(s)	56, 153, 501, 733, 1908
Mox20I	TGGCCA	1 cut(s)	1920
MroNI	GCCGGC	3 cut(s)	223, 304, 856
MroXI	GAANNNNTTC	5 cut(s)	197, 412, 1275, 1389, 1525
MscI	TGGCCA	1 cut(s)	1920
MseI	TTAA	5 cut(s)	867, 1064, 1251, 1608, 2090
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1920
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 503, 529, 1044, 2107
Mva1269I	GAATGC	1 cut(s)	658
MvaI	CCWGG	1 cut(s)	2107
MvnI	CGCG	6 cut(s)	8, 10, 102, 177, 235, 260
NaeI	GCCGGC	3 cut(s)	225, 306, 858
NciI	CCSGG	4 cut(s)	24, 503, 529, 1044
NcoI	CCATGG	2 cut(s)	48, 106
NdeII	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
NgoMIV	GCCGGC	3 cut(s)	223, 304, 856
NlaIII	CATG	9 cut(s)	52, 110, 370, 623, 1355, 1508, 1618, 1637, 2101
NlaIV	GGNNCC	7 cut(s)	35, 228, 500, 768, 942, 1099, 1226
NmeAIII	GCCGAG	2 cut(s)	738, 938
NmuCI	GTSAC	1 cut(s)	737
PagI	TCATGA	3 cut(s)	1351, 1504, 2097
PaqCI	CACCTGC	1 cut(s)	1351
PasI	CCCWGGG	1 cut(s)	2106
PauI	GCGCGC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	1826
PctI	GAATGC	1 cut(s)	658
PdiI	GCCGGC	3 cut(s)	225, 306, 858
PdmI	GAANNNNTTC	5 cut(s)	197, 412, 1275, 1389, 1525
PfeI	GAWTC	5 cut(s)	602, 680, 1276, 1526, 2057
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	6 cut(s)	1159, 1411, 1647, 1799, 2035, 2109
PpsI	GAGTC	6 cut(s)	1159, 1411, 1647, 1799, 2035, 2109
PpuMI	RGGWCCY	1 cut(s)	1224
PshAI	GACNNNNGTC	1 cut(s)	1032
Psp124BI	GAGCTC	1 cut(s)	707
Psp5II	RGGWCCY	1 cut(s)	1224
Psp6I	CCWGG	1 cut(s)	2105
PspFI	CCCAGC	1 cut(s)	1954
PspGI	CCWGG	1 cut(s)	2105
PspN4I	GGNNCC	7 cut(s)	35, 228, 500, 768, 942, 1099, 1226
PspPI	GGNCC	5 cut(s)	58, 262, 531, 1224, 1283
PspPPI	RGGWCCY	1 cut(s)	1224
PstNI	CAGNNNCTG	2 cut(s)	298, 1856
PsuI	RGATCY	2 cut(s)	78, 1993
PteI	GCGCGC	1 cut(s)	8
RsaI	GTAC	4 cut(s)	35, 431, 1099, 1986
RsaNI	GTAC	4 cut(s)	34, 430, 1098, 1985
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	707
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	5 cut(s)	867, 1064, 1251, 1608, 2090
Sau3AI	GATC	9 cut(s)	78, 361, 988, 1049, 1129, 1348, 1501, 1941, 1993
Sau96I	GGNCC	5 cut(s)	58, 262, 531, 1224, 1283
SchI	GAGTC	6 cut(s)	1160, 1412, 1648, 1799, 2035, 2110
ScrFI	CCNGG	5 cut(s)	24, 503, 529, 1044, 2107
SduI	GDGCHC	4 cut(s)	95, 630, 707, 771
SfaNI	GCATC	2 cut(s)	661, 1618
Sfr303I	CCGCGG	1 cut(s)	103
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	58, 1224
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1056
SmoI	CTYRAG	1 cut(s)	1056
SseBI	AGGCCT	1 cut(s)	1826
SspMI	CTAG	4 cut(s)	948, 972, 1871, 1902
SstI	GAGCTC	1 cut(s)	707
StuI	AGGCCT	1 cut(s)	1826
StyD4I	CCNGG	5 cut(s)	22, 501, 527, 1042, 2105
StyI	CCWWGG	3 cut(s)	48, 106, 936
TaaI	ACNGT	2 cut(s)	62, 1076
TaiI	ACGT	4 cut(s)	249, 389, 560, 1032
TaqI	TCGA	4 cut(s)	191, 707, 1068, 1602
TfiI	GAWTC	5 cut(s)	602, 680, 1276, 1526, 2057
Tru1I	TTAA	5 cut(s)	867, 1064, 1251, 1608, 2090
Tru9I	TTAA	5 cut(s)	867, 1064, 1251, 1608, 2090
TscAI	CASTG	2 cut(s)	681, 913
TseFI	GTSAC	1 cut(s)	737
TseI	GCWGC	7 cut(s)	205, 298, 301, 340, 1582, 1697, 2113
Tsp45I	GTSAC	1 cut(s)	737
TspDTI	ATGAA	5 cut(s)	809, 837, 1278, 1587, 2086
TspGWI	ACGGA	1 cut(s)	756
TspRI	CASTG	2 cut(s)	681, 913
VpaK11BI	GGWCC	2 cut(s)	58, 1224
XapI	RAATTY	6 cut(s)	929, 951, 1171, 1422, 1554, 1859
XbaI	TCTAGA	1 cut(s)	1870
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1928
XmiI	GTMKAC	1 cut(s)	1756
XmnI	GAANNNNTTC	5 cut(s)	197, 412, 1275, 1389, 1525
XspI	CTAG	4 cut(s)	948, 972, 1871, 1902
ZraI	GACGTC	1 cut(s)	387

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.