Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001467.1

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Reverse (-)

77014 .. 80867

Gene Structure 3854 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001467.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

atgcacgcgcgccaccgcaatcccggaaatgggtaccggtctaattccatgggtatggaccgtattggaatgggtcggatctcgccggagggctcactccgcggccatggctattacaacaacaactccgacccccctcaccgcaacaacaacaacaacagcttcaatcgcggctacggccggtcgaaatcgttccagcagccgccacctcctccgccgccgccgccgcccgctccgccgcgaaagggggacgtatttatggacgcgggccggatggcggcggagtatctggtggcgcaggggctgctgccggcgagcgtgctgtcggcaaagtggcagaagaagcagcaggtagagtttgagggtgatcacatgagagaggaggggaggacgtcggcgctttcccgattaggaaatgtttcggagggaggagggtacagaagaggaaggtttgggggtgtggatgagttcagtagtaatgcgaggaataaggggaggaggaggaaccggggcggcgggtatgggtcggatacccggcccgattggtatgggaggagtgggacgttttcggataggcatagtagggcttcttctgagtgtgaggatgattctgcttctgggaggcatgaggagcacaaggtggggagagatgttgggaatgcaagggagagtgaggatgcagtggattcggagacgaaggaggatatgagctcgaagccgagttcttctggtgcaaatgggagtgacggagttgttgttggagtaaatgtggagcccaacaaggtgaatgatgtagagatgaaggataaggattgtggcaatggtgatgaaactgagaaacagagtgttgtggaggagttgccggctcaggttaaggccgatggagagggggatttgggtggtaggaatggcactgatttgttgaaactatgcaaattcgccaaggtgcctactagaattcgctcggcattgactactaggggtttgaaggttgatccacttccaattatccaagagggaagcacgtcgtctgacactggtctgcaaccgggaggatcatctcaaggtttaatcgaaaaccgttctcttgatgttgcctcaggtaccccagtattagataactctcattatgttgatcctgaaacttctaaagttgagtccagtcaatctgttgagaatttggtagaattaggttctggatttggtattgagcagaataagtttgaaaggtcccagtcattaccagatagagcttttaagcgtgagaatgaacaagaattgattcaagggccagcagggcttaggagttttagctttgcagttaaggaaagaggtgagaagagggctttagaagatcatgataagcaggtggaagcaaaaaaaccaagagaatggcttccctacgcagagtcagatgattgtttccaaatttccaatttgagcgaaaagaaagcaagtccgttggaggacaacacttctcctgctgagaaagtgattgtagctgttgatcatgacagctcaatgggaaatgattcccagttccgaaaagatggagctgaaatttgtgttgattatatgcaagagaagcagctttttcctaattcattcgaccttaatctcatggaggttagcgatgcacatgagagtcgtgatagtaattctgtaataaactacacagatgtctctggagtgaagaaagaagcagcgccggttgatattgacttgtcaatgagtaactgcaatatgtctcgtgagagcagtagacgccctgtggatgtcaaagggatagaagtaattgatttagaaaatgactctattcctgaagacaaggccttcaataatgcggaaagaaagacagggactgaatttatacctctagatggcttttccaaccaaccacagaactctagtgatatccccgatggccaagatggttatgggctaatgatctcggagttgctgggaaatgatttccctacttgttcttcagtaccggaggatcttactccaatgcctaacgatattggtcttcctaatgcagaggggactcttgcagatgatgattcaatatatatggctctgggcgaaataccattaacctacatgagtccctgggagcagccacccccgcaagagtatgagaagcccttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

717

Amino Acids

78.47

Weight (kDa)

4.86

Isoelectric Point (pI)

55.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1357
AatII	GACGTC	1 cut(s)	395
Acc36I	ACCTGC	2 cut(s)	340, 1357
Acc65I	GGTACC	2 cut(s)	33, 1103
AccB1I	GGYRCC	3 cut(s)	33, 946, 1103
AccBSI	CCGCTC	1 cut(s)	233
AccI	GTMKAC	1 cut(s)	1762
AccII	CGCG	6 cut(s)	8, 10, 102, 171, 241, 266
AclWI	GGATC	5 cut(s)	86, 989, 1063, 1130, 2007
AcoI	YGGCCR	3 cut(s)	103, 178, 1924
AcsI	RAATTY	6 cut(s)	935, 957, 1177, 1428, 1560, 1865
AcuI	CTGAAG	2 cut(s)	1842, 1971
AcyI	GRCGYC	2 cut(s)	392, 1765
AdeI	CACNNNGTG	1 cut(s)	640
AfaI	GTAC	4 cut(s)	35, 437, 1105, 1992
AfiI	CCNNNNNNNGG	5 cut(s)	29, 30, 245, 277, 1880
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	166, 925, 988, 1226, 1286, 1837, 2067
AjiI	CACGTC	1 cut(s)	1026
AjnI	CCWGG	1 cut(s)	2111
AluBI	AGCT	8 cut(s)	162, 711, 1253, 1314, 1502, 1518, 1556, 1591
AluI	AGCT	8 cut(s)	162, 711, 1253, 1314, 1502, 1518, 1556, 1591
Alw21I	GWGCWC	2 cut(s)	636, 713
Alw26I	GTCTC	3 cut(s)	686, 1687, 1752
AlwI	GGATC	5 cut(s)	86, 989, 1063, 1130, 2007
AlwNI	CAGNNNCTG	2 cut(s)	304, 1862
AoxI	GGCC	8 cut(s)	103, 178, 268, 536, 876, 1289, 1830, 1924
ApeKI	GCWGC	7 cut(s)	199, 304, 307, 346, 1588, 1703, 2119
ApoI	RAATTY	6 cut(s)	935, 957, 1177, 1428, 1560, 1865
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	5 cut(s)	191, 418, 1281, 1395, 1531
Asp718I	GGTACC	2 cut(s)	33, 1103
AspLEI	GCGC	5 cut(s)	10, 12, 298, 400, 1708
AspS9I	GGNCC	5 cut(s)	58, 268, 537, 1230, 1289
AsuC2I	CCSGG	4 cut(s)	24, 509, 535, 1050
AsuHPI	GGTGA	5 cut(s)	131, 377, 796, 836, 1346
AvaII	GGWCC	2 cut(s)	58, 1230
AxyI	CCTNAGG	1 cut(s)	1099
BaeI	ACNNNNGTAYC	2 cut(s)	1095, 1128
BalI	TGGCCA	1 cut(s)	1926
BanI	GGYRCC	3 cut(s)	33, 946, 1103
BanII	GRGCYC	3 cut(s)	95, 713, 777
BarI	GAAGNNNNNNTAC	2 cut(s)	574, 606
BauI	CACGAG	1 cut(s)	1749
BbsI	GAAGAC	2 cut(s)	1830, 2021
Bbv12I	GWGCWC	2 cut(s)	636, 713
BbvI	GCAGC	7 cut(s)	211, 291, 294, 358, 1600, 1715, 2131
BccI	CCATC	6 cut(s)	268, 875, 1544, 1874, 1916, 1925
BceAI	ACGGC	1 cut(s)	193
BcgI	CGANNNNNNTGC	2 cut(s)	669, 703
BciT130I	CCWGG	1 cut(s)	2113
BciVI	GTATCC	1 cut(s)	523
BclI	TGATCA	2 cut(s)	367, 1507
BcnI	CCSGG	4 cut(s)	24, 509, 535, 1050
BcoDI	GTCTC	3 cut(s)	686, 1687, 1752
BfaI	CTAG	4 cut(s)	954, 978, 1877, 1908
BfoI	RGCGCY	2 cut(s)	401, 1709
BfuAI	ACCTGC	2 cut(s)	340, 1357
BfuI	GTATCC	1 cut(s)	523
BglI	GCCNNNNNGGC	1 cut(s)	1297
Bme1390I	CCNGG	5 cut(s)	24, 509, 535, 1050, 2113
Bme18I	GGWCC	2 cut(s)	58, 1230
BmgBI	CACGTC	1 cut(s)	1026
BmgT120I	GGNCC	5 cut(s)	58, 268, 537, 1230, 1289
BmiI	GGNNCC	6 cut(s)	35, 506, 774, 948, 1105, 1232
BmrFI	CCNGG	5 cut(s)	24, 509, 535, 1050, 2113
BmrI	ACTGGG	3 cut(s)	1103, 1228, 1531
BmsI	GCATC	2 cut(s)	667, 1624
BmuI	ACTGGG	3 cut(s)	1103, 1228, 1531
BoxI	GACNNNNGTC	1 cut(s)	1038
BpiI	GAAGAC	2 cut(s)	1830, 2021
BpmI	CTGGAG	1 cut(s)	1707
Bpu10I	CCTNAGC	2 cut(s)	867, 1301
BpuEI	CTTGAG	1 cut(s)	1047
BpuMI	CCSGG	4 cut(s)	24, 509, 535, 1050
BsaHI	GRCGYC	2 cut(s)	392, 1765
BsaJI	CCNNGG	7 cut(s)	48, 100, 106, 508, 942, 2111, 2112
BsaWI	WCCGGW	2 cut(s)	36, 1993
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 140, 741, 753, 771, 783
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 30, 245, 277, 1880
Bse118I	RCCGGY	5 cut(s)	36, 180, 310, 862, 1708
Bse1I	ACTGG	5 cut(s)	1042, 1109, 1161, 1234, 1537
Bse21I	CCTNAGG	1 cut(s)	1099
Bse3DI	GCAATG	1 cut(s)	826
BseBI	CCWGG	1 cut(s)	2113
BseDI	CCNNGG	7 cut(s)	48, 100, 106, 508, 942, 2111, 2112
BseGI	GGATG	5 cut(s)	279, 469, 610, 682, 1780
BseLI	CCNNNNNNNGG	5 cut(s)	29, 30, 245, 277, 1880
BseMI	GCAATG	1 cut(s)	826
BseMII	CTCAG	5 cut(s)	585, 825, 881, 1113, 1476
BseNI	ACTGG	5 cut(s)	1042, 1109, 1161, 1234, 1537
BsePI	GCGCGC	1 cut(s)	8
BseRI	GAGGAG	8 cut(s)	201, 395, 444, 511, 514, 568, 644, 869
BseX3I	CGGCCG	1 cut(s)	178
BseXI	GCAGC	7 cut(s)	211, 291, 294, 358, 1600, 1715, 2131
BseYI	CCCAGC	1 cut(s)	1960
Bsh1236I	CGCG	6 cut(s)	8, 10, 102, 171, 241, 266
Bsh1285I	CGRYCG	2 cut(s)	181, 185
BshFI	GGCC	8 cut(s)	105, 180, 270, 538, 878, 1291, 1832, 1926
BshNI	GGYRCC	3 cut(s)	33, 946, 1103
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	2 cut(s)	181, 185
BsiHKAI	GWGCWC	2 cut(s)	636, 713
BslFI	GGGAC	6 cut(s)	263, 574, 1216, 1873, 2059, 2094
BslI	CCNNNNNNNGG	5 cut(s)	29, 30, 245, 277, 1880
BsmAI	GTCTC	3 cut(s)	686, 1687, 1752
BsmBI	CGTCTC	1 cut(s)	686
BsmFI	GGGAC	6 cut(s)	263, 574, 1216, 1873, 2059, 2094
BsmI	GAATGC	1 cut(s)	664
BsnI	GGCC	8 cut(s)	105, 180, 270, 538, 878, 1291, 1832, 1926
Bsp1286I	GDGCHC	4 cut(s)	95, 636, 713, 777
Bsp143I	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	8 cut(s)	105, 180, 270, 538, 878, 1291, 1832, 1926
BspCNI	CTCAG	5 cut(s)	586, 826, 880, 1112, 1477
BspFNI	CGCG	6 cut(s)	8, 10, 102, 171, 241, 266
BspHI	TCATGA	2 cut(s)	1357, 1510
BspLI	GGNNCC	6 cut(s)	35, 506, 774, 948, 1105, 1232
BspMI	ACCTGC	2 cut(s)	340, 1357
BspPI	GGATC	5 cut(s)	86, 989, 1063, 1130, 2007
BspT107I	GGYRCC	3 cut(s)	33, 946, 1103
BsrBI	CCGCTC	1 cut(s)	233
BsrDI	GCAATG	1 cut(s)	826
BsrFI	RCCGGY	5 cut(s)	36, 180, 310, 862, 1708
BsrI	ACTGG	5 cut(s)	1042, 1109, 1161, 1234, 1537
BssAI	RCCGGY	5 cut(s)	36, 180, 310, 862, 1708
BssECI	CCNNGG	7 cut(s)	48, 100, 106, 508, 942, 2111, 2112
BssHII	GCGCGC	1 cut(s)	8
BssMI	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
BssNI	GRCGYC	2 cut(s)	392, 1765
BssSI	CACGAG	1 cut(s)	1749
BssT1I	CCWWGG	3 cut(s)	48, 106, 942
Bst2BI	CACGAG	1 cut(s)	1749
Bst2UI	CCWGG	1 cut(s)	2113
Bst4CI	ACNGT	2 cut(s)	62, 1082
Bst6I	CTCTTC	2 cut(s)	436, 1334
BstACI	GRCGYC	2 cut(s)	392, 1765
BstAPI	GCANNNNNTGC	1 cut(s)	304
BstC8I	GCNNGC	9 cut(s)	6, 10, 231, 268, 312, 316, 320, 864, 1293
BstDEI	CTNAG	6 cut(s)	594, 834, 867, 1099, 1301, 1485
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	5 cut(s)	279, 469, 610, 682, 1780
BstFNI	CGCG	6 cut(s)	8, 10, 102, 171, 241, 266
BstH2I	RGCGCY	2 cut(s)	401, 1709
BstHHI	GCGC	5 cut(s)	10, 12, 298, 400, 1708
BstKTI	GATC	9 cut(s)	81, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
BstMAI	GTCTC	3 cut(s)	686, 1687, 1752
BstMBI	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
BstMCI	CGRYCG	2 cut(s)	181, 185
BstNI	CCWGG	1 cut(s)	2113
BstPAI	GACNNNNGTC	1 cut(s)	1038
BstSCI	CCNGG	5 cut(s)	22, 507, 533, 1048, 2111
BstUI	CGCG	6 cut(s)	8, 10, 102, 171, 241, 266
BstV1I	GCAGC	7 cut(s)	211, 291, 294, 358, 1600, 1715, 2131
BstV2I	GAAGAC	2 cut(s)	1830, 2021
BstX2I	RGATCY	2 cut(s)	78, 1999
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1392
BstYI	RGATCY	2 cut(s)	78, 1999
BstZI	CGGCCG	1 cut(s)	178
Bsu36I	CCTNAGG	1 cut(s)	1099
BsuI	GTATCC	1 cut(s)	523
BsuRI	GGCC	8 cut(s)	105, 180, 270, 538, 878, 1291, 1832, 1926
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1647
BtrI	CACGTC	1 cut(s)	1026
BtsCI	GGATG	5 cut(s)	279, 469, 610, 682, 1780
BtsI	GCAGTG	1 cut(s)	687
BtsIMutI	CAGTG	3 cut(s)	687, 912, 1035
BveI	ACCTGC	2 cut(s)	340, 1357
Cac8I	GCNNGC	9 cut(s)	6, 10, 231, 268, 312, 316, 320, 864, 1293
CaiI	CAGNNNCTG	2 cut(s)	304, 1862
CciI	TCATGA	2 cut(s)	1357, 1510
CfoI	GCGC	5 cut(s)	10, 12, 298, 400, 1708
Cfr10I	RCCGGY	5 cut(s)	36, 180, 310, 862, 1708
Cfr13I	GGNCC	5 cut(s)	58, 268, 537, 1230, 1289
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	2 cut(s)	272, 1773
Csp6I	GTAC	4 cut(s)	34, 436, 1104, 1991
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	9 cut(s)	49, 107, 373, 626, 1358, 1511, 1621, 1640, 2104
CviQI	GTAC	4 cut(s)	34, 436, 1104, 1991
DdeI	CTNAG	6 cut(s)	594, 834, 867, 1099, 1301, 1485
DpnI	GATC	9 cut(s)	80, 369, 996, 1057, 1137, 1356, 1509, 1949, 2001
DpnII	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
DraIII	CACNNNGTG	1 cut(s)	640
EaeI	YGGCCR	3 cut(s)	103, 178, 1924
EagI	CGGCCG	1 cut(s)	178
Eam1104I	CTCTTC	2 cut(s)	436, 1334
EarI	CTCTTC	2 cut(s)	436, 1334
EciI	GGCGGA	3 cut(s)	204, 225, 296
Ecl136II	GAGCTC	1 cut(s)	711
EclXI	CGGCCG	1 cut(s)	178
Eco130I	CCWWGG	3 cut(s)	48, 106, 942
Eco147I	AGGCCT	1 cut(s)	1832
Eco24I	GRGCYC	3 cut(s)	95, 713, 777
Eco32I	GATATC	1 cut(s)	1915
Eco47I	GGWCC	2 cut(s)	58, 1230
Eco52I	CGGCCG	1 cut(s)	178
Eco53kI	GAGCTC	1 cut(s)	711
Eco57I	CTGAAG	2 cut(s)	1842, 1971
Eco81I	CCTNAGG	1 cut(s)	1099
EcoICRI	GAGCTC	1 cut(s)	711
EcoO109I	RGGNCCY	1 cut(s)	1230
EcoRI	GAATTC	1 cut(s)	957
EcoRII	CCWGG	1 cut(s)	2111
EcoRV	GATATC	1 cut(s)	1915
EcoT14I	CCWWGG	3 cut(s)	48, 106, 942
EcoT38I	GRGCYC	3 cut(s)	95, 713, 777
ErhI	CCWWGG	3 cut(s)	48, 106, 942
Esp3I	CGTCTC	1 cut(s)	686
FaeI	CATG	9 cut(s)	52, 110, 376, 629, 1361, 1514, 1624, 1643, 2107
FaqI	GGGAC	6 cut(s)	263, 574, 1216, 1873, 2059, 2094
FatI	CATG	9 cut(s)	48, 106, 372, 625, 1357, 1510, 1620, 1639, 2103
FauI	CCCGC	4 cut(s)	238, 259, 509, 2136
FbaI	TGATCA	2 cut(s)	367, 1507
FblI	GTMKAC	1 cut(s)	1762
FokI	GGATG	5 cut(s)	286, 476, 617, 689, 1787
FriOI	GRGCYC	3 cut(s)	95, 713, 777
FspBI	CTAG	4 cut(s)	954, 978, 1877, 1908
GlaI	GCGC	5 cut(s)	9, 11, 297, 399, 1707
GsaI	CCCAGC	1 cut(s)	1964
GsuI	CTGGAG	1 cut(s)	1707
HaeII	RGCGCY	2 cut(s)	401, 1709
HaeIII	GGCC	8 cut(s)	105, 180, 270, 538, 878, 1291, 1832, 1926
HgaI	GACGC	2 cut(s)	272, 1773
HhaI	GCGC	5 cut(s)	10, 12, 298, 400, 1708
Hin1I	GRCGYC	2 cut(s)	392, 1765
Hin1II	CATG	9 cut(s)	52, 110, 376, 629, 1361, 1514, 1624, 1643, 2107
Hin6I	GCGC	5 cut(s)	8, 10, 296, 398, 1706
HinP1I	GCGC	5 cut(s)	8, 10, 296, 398, 1706
HphI	GGTGA	5 cut(s)	131, 377, 796, 836, 1346
Hpy166II	GTNNAC	1 cut(s)	1763
Hpy8I	GTNNAC	1 cut(s)	1763
Hpy99I	CGWCG	2 cut(s)	397, 1030
HpyAV	CCTTC	5 cut(s)	441, 691, 796, 982, 1843
HpyCH4III	ACNGT	2 cut(s)	62, 1082
HpyCH4IV	ACGT	4 cut(s)	252, 392, 563, 1025
HpyF3I	CTNAG	6 cut(s)	594, 834, 867, 1099, 1301, 1485
HpySE526I	ACGT	4 cut(s)	252, 392, 563, 1025
Hsp92I	GRCGYC	2 cut(s)	392, 1765
Hsp92II	CATG	9 cut(s)	52, 110, 376, 629, 1361, 1514, 1624, 1643, 2107
HspAI	GCGC	5 cut(s)	8, 10, 296, 398, 1706
KpnI	GGTACC	2 cut(s)	37, 1107
KroI	GCCGGC	2 cut(s)	310, 862
KroNI	GCCGGC	2 cut(s)	312, 864
Ksp22I	TGATCA	2 cut(s)	367, 1507
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
LmnI	GCTCC	5 cut(s)	238, 631, 772, 1553, 2116
Lsp1109I	GCAGC	7 cut(s)	211, 291, 294, 358, 1600, 1715, 2131
LweI	GCATC	2 cut(s)	667, 1624
MaeI	CTAG	4 cut(s)	954, 978, 1877, 1908
MaeII	ACGT	4 cut(s)	252, 392, 563, 1025
MaeIII	GTNAC	2 cut(s)	743, 1733
MalI	GATC	9 cut(s)	80, 369, 996, 1057, 1137, 1356, 1509, 1949, 2001
MbiI	CCGCTC	1 cut(s)	233
MboI	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
MflI	RGATCY	2 cut(s)	78, 1999
MhlI	GDGCHC	4 cut(s)	95, 636, 713, 777
MlsI	TGGCCA	1 cut(s)	1926
MluNI	TGGCCA	1 cut(s)	1926
MlyI	GAGTC	6 cut(s)	1166, 1418, 1654, 1805, 2041, 2116
MmeI	TCCRAC	6 cut(s)	56, 153, 507, 739, 1443, 1914
Mox20I	TGGCCA	1 cut(s)	1926
MroNI	GCCGGC	2 cut(s)	310, 862
MroXI	GAANNNNTTC	5 cut(s)	191, 418, 1281, 1395, 1531
MscI	TGGCCA	1 cut(s)	1926
MseI	TTAA	6 cut(s)	873, 1070, 1257, 1323, 1614, 2096
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1926
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 509, 535, 1050, 2113
Mva1269I	GAATGC	1 cut(s)	664
MvaI	CCWGG	1 cut(s)	2113
MvnI	CGCG	6 cut(s)	8, 10, 102, 171, 241, 266
NaeI	GCCGGC	2 cut(s)	312, 864
NciI	CCSGG	4 cut(s)	24, 509, 535, 1050
NcoI	CCATGG	2 cut(s)	48, 106
NdeII	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
NgoMIV	GCCGGC	2 cut(s)	310, 862
NlaIII	CATG	9 cut(s)	52, 110, 376, 629, 1361, 1514, 1624, 1643, 2107
NlaIV	GGNNCC	6 cut(s)	35, 506, 774, 948, 1105, 1232
NmeAIII	GCCGAG	2 cut(s)	744, 944
NmuCI	GTSAC	1 cut(s)	743
PagI	TCATGA	2 cut(s)	1357, 1510
PaqCI	CACCTGC	1 cut(s)	1357
PasI	CCCWGGG	1 cut(s)	2112
PauI	GCGCGC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	1832
PctI	GAATGC	1 cut(s)	664
PdiI	GCCGGC	2 cut(s)	312, 864
PdmI	GAANNNNTTC	5 cut(s)	191, 418, 1281, 1395, 1531
PfeI	GAWTC	5 cut(s)	608, 686, 1282, 1532, 2063
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	6 cut(s)	1165, 1417, 1653, 1805, 2041, 2115
PpsI	GAGTC	6 cut(s)	1165, 1417, 1653, 1805, 2041, 2115
PpuMI	RGGWCCY	1 cut(s)	1230
PshAI	GACNNNNGTC	1 cut(s)	1038
Psp124BI	GAGCTC	1 cut(s)	713
Psp5II	RGGWCCY	1 cut(s)	1230
Psp6I	CCWGG	1 cut(s)	2111
PspFI	CCCAGC	1 cut(s)	1960
PspGI	CCWGG	1 cut(s)	2111
PspN4I	GGNNCC	6 cut(s)	35, 506, 774, 948, 1105, 1232
PspPI	GGNCC	5 cut(s)	58, 268, 537, 1230, 1289
PspPPI	RGGWCCY	1 cut(s)	1230
PstNI	CAGNNNCTG	2 cut(s)	304, 1862
PsuI	RGATCY	2 cut(s)	78, 1999
PteI	GCGCGC	1 cut(s)	8
RsaI	GTAC	4 cut(s)	35, 437, 1105, 1992
RsaNI	GTAC	4 cut(s)	34, 436, 1104, 1991
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	713
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	873, 1070, 1257, 1323, 1614, 2096
Sau3AI	GATC	9 cut(s)	78, 367, 994, 1055, 1135, 1354, 1507, 1947, 1999
Sau96I	GGNCC	5 cut(s)	58, 268, 537, 1230, 1289
SchI	GAGTC	6 cut(s)	1166, 1418, 1654, 1805, 2041, 2116
ScrFI	CCNGG	5 cut(s)	24, 509, 535, 1050, 2113
SduI	GDGCHC	4 cut(s)	95, 636, 713, 777
SfaNI	GCATC	2 cut(s)	667, 1624
Sfr303I	CCGCGG	1 cut(s)	103
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	58, 1230
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1062
SmoI	CTYRAG	1 cut(s)	1062
SseBI	AGGCCT	1 cut(s)	1832
SspMI	CTAG	4 cut(s)	954, 978, 1877, 1908
SstI	GAGCTC	1 cut(s)	713
StuI	AGGCCT	1 cut(s)	1832
StyD4I	CCNGG	5 cut(s)	22, 507, 533, 1048, 2111
StyI	CCWWGG	3 cut(s)	48, 106, 942
TaaI	ACNGT	2 cut(s)	62, 1082
TaiI	ACGT	4 cut(s)	255, 395, 566, 1028
TaqI	TCGA	4 cut(s)	185, 713, 1074, 1608
TfiI	GAWTC	5 cut(s)	608, 686, 1282, 1532, 2063
Tru1I	TTAA	6 cut(s)	873, 1070, 1257, 1323, 1614, 2096
Tru9I	TTAA	6 cut(s)	873, 1070, 1257, 1323, 1614, 2096
TscAI	CASTG	3 cut(s)	687, 919, 1042
TseFI	GTSAC	1 cut(s)	743
TseI	GCWGC	7 cut(s)	199, 304, 307, 346, 1588, 1703, 2119
Tsp45I	GTSAC	1 cut(s)	743
TspDTI	ATGAA	4 cut(s)	815, 843, 1284, 1593
TspGWI	ACGGA	2 cut(s)	762, 1449
TspRI	CASTG	3 cut(s)	687, 919, 1042
VpaK11BI	GGWCC	2 cut(s)	58, 1230
XapI	RAATTY	6 cut(s)	935, 957, 1177, 1428, 1560, 1865
XbaI	TCTAGA	1 cut(s)	1876
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1934
XmiI	GTMKAC	1 cut(s)	1762
XmnI	GAANNNNTTC	5 cut(s)	191, 418, 1281, 1395, 1531
XspI	CTAG	4 cut(s)	954, 978, 1877, 1908
ZraI	GACGTC	1 cut(s)	393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.