Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Forward (+)

74790389 .. 74793776

Gene Structure 3388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG534200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGCACGCGCGCCACCGCAATCCCGGAAATGGGTACCGGTCTAATTCCATGGGTATGGACCGTATCGGAATGGGTCGGATCTCGCCGGAGGGCTCACTCCGCGGCCATGGCTATTACAACAACAACTCCGACCCCCCTCACCGCAACAACAACAACAACAACAACAGCTTCAATCGCGGCTACGGCCGGTCGAAATCGTTCCAGCAGCCGCCACCTCCGCCGCCTCCGCCGCCCGCTCCGCCGCGAAAGGGGGACGTATTTATGGACGCGGGCCGGATGGCGGCGGAGTATCTGGTGGCGCAGGGGCTGCTGCCGGCGAGCGTGCTGTCGGCAAAGTGGCAGAAGAAGCAGCAGGTAGAGTTTGAGGGTGATCACATGAGAGAGGAGGGGAGGACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGAGGGAGGAGGGTACAGAAGAGGAAGGTTCGGGGGTGTGGATGAGTTCAGTAGTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGCGGCGGGTATGGGTCGGATACCCGGCCCGATTGGTATGGGAGGAGTGGGACGTTTTCGGATAGGCATAGTAGGGCTTCTTCTGAGTGTGAGGATGATTCTGCTTCTGGGAGGCATGAGGAGCACAAGGTGGGGAGAGATGTTGGGAATGCAAGGGAGAGTGAGGATGCAGTGGATTCGGAGACGAAGGAGGATATGAGCTCGAAGCCGAGTTCTTCTGGTGCAAATGGGAGTGACGGAGTTGTTGTTGGAGTAAATGTGGAGCCCAACAAGGTGAATGATGTAGAGATGAAGGATAAGGATTGTGGCAATGGTGATGAAACTGAGAAACAGAGTGTTGTGGAGGAGTTGCCGGCTCAGGTTAAGGCCGATGGAGAGGGGGATTTGGGTGGTAGGAATGGCACTGATTTGTTGAAACTATGCAAATTCGCCAAGGTGCCTACTAGAATTCGCTCGGCATTGACTACTAGGGGTTTGAAGGTTGATCCACTTCCAATTATCCAAGAGGGAAGCACGTCGTCTGACACTGGTCTGCAACCGGGAGGATCATCTCAAGGTTTAATCGAAAACCGTTCTCTTGATGTTGCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGTTGATCCTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATTAGGTTCTGGATTTGGTATTGAGCAGAATAAGTTTGAAAGGTCCCAGTCATTACCAGATAGAGCTTTTAAGCGTGAGAATGAACAAGAATTGATTCAAGGGCCAGCAGGGCTTAGGAGTTTTAGCTTTGCAGTTAAGGAAAGAGGTGAGAAGAGGGCTTTAGAAGATCATGATAAGCAGGTGGAAGCAAAAAAACCAAGAGAATGGCTTCCCTACGCAGAGTCAGATGATTGTTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCGTTGGAGGACAACACTTCTCCTGCTGAGAAAGTGATTGTAGCTGTTGATCATGACAACTCAATGGGAAATGATTCCCAGTTCCGAAAAGATGGAGCTGAAATTTGTGTTGATTATATGCAAGAGAAGCAGCTTTTTCCTAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAGTCGTGATAGTAATTCTGTAATAAACTACACAGATGTCTCTGGAGTGAAGAAAGAAGCAGCGCCGGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAGAGCAGTAGACGCCCTGTGGATGTCAAAGGGATAGAAGTAATTGATTTAGAAAATGACTCTATTCCTGAAGACAAGGCCTTCAATAATGCGGAAAGAAAGACAGGGACTGAATTTATACCTCTAGATGGCTTTTCCAACCAACCACAGAACTCTAGTGATATCCCCGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAGTTGCTGGGAAATGATTTCCCTACTTGTTCTTCAGTACCAGAGGATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGCAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGCGAAATACCATTAACCTACATGAGTCCCTGGGAGCAGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

718

Amino Acids

78.63

Weight (kDa)

4.86

Isoelectric Point (pI)

54.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1360
AatII	GACGTC	1 cut(s)	398
Acc36I	ACCTGC	2 cut(s)	343, 1360
Acc65I	GGTACC	2 cut(s)	33, 1106
AccB1I	GGYRCC	3 cut(s)	33, 949, 1106
AccBSI	CCGCTC	1 cut(s)	236
AccI	GTMKAC	1 cut(s)	1765
AccII	CGCG	6 cut(s)	8, 10, 102, 177, 244, 269
AclWI	GGATC	5 cut(s)	86, 992, 1066, 1133, 2010
AcoI	YGGCCR	3 cut(s)	103, 184, 1927
AcsI	RAATTY	6 cut(s)	938, 960, 1180, 1431, 1563, 1868
AcuI	CTGAAG	2 cut(s)	1845, 1974
AcyI	GRCGYC	2 cut(s)	395, 1768
AdeI	CACNNNGTG	1 cut(s)	643
AfaI	GTAC	4 cut(s)	35, 440, 1108, 1995
AfiI	CCNNNNNNNGG	5 cut(s)	29, 30, 248, 280, 1883
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	172, 928, 991, 1229, 1289, 1840, 2070
AjiI	CACGTC	1 cut(s)	1029
AjnI	CCWGG	1 cut(s)	2114
AluBI	AGCT	7 cut(s)	168, 714, 1256, 1317, 1505, 1559, 1594
AluI	AGCT	7 cut(s)	168, 714, 1256, 1317, 1505, 1559, 1594
Alw21I	GWGCWC	2 cut(s)	639, 716
Alw26I	GTCTC	3 cut(s)	689, 1690, 1755
AlwI	GGATC	5 cut(s)	86, 992, 1066, 1133, 2010
AlwNI	CAGNNNCTG	2 cut(s)	307, 1865
AoxI	GGCC	8 cut(s)	103, 184, 271, 539, 879, 1292, 1833, 1927
ApeKI	GCWGC	7 cut(s)	205, 307, 310, 349, 1591, 1706, 2122
ApoI	RAATTY	6 cut(s)	938, 960, 1180, 1431, 1563, 1868
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	5 cut(s)	197, 421, 1284, 1398, 1534
Asp718I	GGTACC	2 cut(s)	33, 1106
AspLEI	GCGC	5 cut(s)	10, 12, 301, 403, 1711
AspS9I	GGNCC	5 cut(s)	58, 271, 540, 1233, 1292
AsuC2I	CCSGG	4 cut(s)	24, 512, 538, 1053
AsuHPI	GGTGA	5 cut(s)	131, 380, 799, 839, 1349
AvaII	GGWCC	2 cut(s)	58, 1233
AxyI	CCTNAGG	1 cut(s)	1102
BaeI	ACNNNNGTAYC	2 cut(s)	1098, 1131
BalI	TGGCCA	1 cut(s)	1929
BanI	GGYRCC	3 cut(s)	33, 949, 1106
BanII	GRGCYC	3 cut(s)	95, 716, 780
BarI	GAAGNNNNNNTAC	2 cut(s)	577, 609
BauI	CACGAG	1 cut(s)	1752
BbsI	GAAGAC	2 cut(s)	1833, 2024
Bbv12I	GWGCWC	2 cut(s)	639, 716
BbvI	GCAGC	7 cut(s)	217, 294, 297, 361, 1603, 1718, 2134
BccI	CCATC	6 cut(s)	271, 878, 1547, 1877, 1919, 1928
BceAI	ACGGC	1 cut(s)	199
BcgI	CGANNNNNNTGC	2 cut(s)	672, 706
BciT130I	CCWGG	1 cut(s)	2116
BciVI	GTATCC	1 cut(s)	526
BclI	TGATCA	2 cut(s)	370, 1510
BcnI	CCSGG	4 cut(s)	24, 512, 538, 1053
BcoDI	GTCTC	3 cut(s)	689, 1690, 1755
BfaI	CTAG	4 cut(s)	957, 981, 1880, 1911
BfoI	RGCGCY	2 cut(s)	404, 1712
BfuAI	ACCTGC	2 cut(s)	343, 1360
BfuI	GTATCC	1 cut(s)	526
BglI	GCCNNNNNGGC	1 cut(s)	1300
Bme1390I	CCNGG	5 cut(s)	24, 512, 538, 1053, 2116
Bme18I	GGWCC	2 cut(s)	58, 1233
BmgBI	CACGTC	1 cut(s)	1029
BmgT120I	GGNCC	5 cut(s)	58, 271, 540, 1233, 1292
BmiI	GGNNCC	6 cut(s)	35, 509, 777, 951, 1108, 1235
BmrFI	CCNGG	5 cut(s)	24, 512, 538, 1053, 2116
BmrI	ACTGGG	3 cut(s)	1106, 1231, 1534
BmsI	GCATC	2 cut(s)	670, 1627
BmuI	ACTGGG	3 cut(s)	1106, 1231, 1534
BoxI	GACNNNNGTC	1 cut(s)	1041
BpiI	GAAGAC	2 cut(s)	1833, 2024
BpmI	CTGGAG	1 cut(s)	1710
Bpu10I	CCTNAGC	2 cut(s)	870, 1304
BpuEI	CTTGAG	1 cut(s)	1050
BpuMI	CCSGG	4 cut(s)	24, 512, 538, 1053
BsaHI	GRCGYC	2 cut(s)	395, 1768
BsaJI	CCNNGG	7 cut(s)	48, 100, 106, 511, 945, 2114, 2115
BsaWI	WCCGGW	1 cut(s)	36
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 140, 744, 756, 774, 786
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 30, 248, 280, 1883
Bse118I	RCCGGY	5 cut(s)	36, 186, 313, 865, 1711
Bse1I	ACTGG	5 cut(s)	1045, 1112, 1164, 1237, 1540
Bse21I	CCTNAGG	1 cut(s)	1102
Bse3DI	GCAATG	1 cut(s)	829
BseBI	CCWGG	1 cut(s)	2116
BseDI	CCNNGG	7 cut(s)	48, 100, 106, 511, 945, 2114, 2115
BseGI	GGATG	5 cut(s)	282, 472, 613, 685, 1783
BseLI	CCNNNNNNNGG	5 cut(s)	29, 30, 248, 280, 1883
BseMI	GCAATG	1 cut(s)	829
BseMII	CTCAG	5 cut(s)	588, 828, 884, 1116, 1479
BseNI	ACTGG	5 cut(s)	1045, 1112, 1164, 1237, 1540
BsePI	GCGCGC	1 cut(s)	8
BseRI	GAGGAG	7 cut(s)	398, 447, 514, 517, 571, 647, 872
BseX3I	CGGCCG	1 cut(s)	184
BseXI	GCAGC	7 cut(s)	217, 294, 297, 361, 1603, 1718, 2134
BseYI	CCCAGC	1 cut(s)	1963
Bsh1236I	CGCG	6 cut(s)	8, 10, 102, 177, 244, 269
Bsh1285I	CGRYCG	2 cut(s)	187, 191
BshFI	GGCC	8 cut(s)	105, 186, 273, 541, 881, 1294, 1835, 1929
BshNI	GGYRCC	3 cut(s)	33, 949, 1106
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	2 cut(s)	187, 191
BsiHKAI	GWGCWC	2 cut(s)	639, 716
BslFI	GGGAC	6 cut(s)	266, 577, 1219, 1876, 2062, 2097
BslI	CCNNNNNNNGG	5 cut(s)	29, 30, 248, 280, 1883
BsmAI	GTCTC	3 cut(s)	689, 1690, 1755
BsmBI	CGTCTC	1 cut(s)	689
BsmFI	GGGAC	6 cut(s)	266, 577, 1219, 1876, 2062, 2097
BsmI	GAATGC	1 cut(s)	667
BsnI	GGCC	8 cut(s)	105, 186, 273, 541, 881, 1294, 1835, 1929
Bsp1286I	GDGCHC	4 cut(s)	95, 639, 716, 780
Bsp143I	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	8 cut(s)	105, 186, 273, 541, 881, 1294, 1835, 1929
BspCNI	CTCAG	5 cut(s)	589, 829, 883, 1115, 1480
BspFNI	CGCG	6 cut(s)	8, 10, 102, 177, 244, 269
BspHI	TCATGA	2 cut(s)	1360, 1513
BspLI	GGNNCC	6 cut(s)	35, 509, 777, 951, 1108, 1235
BspMI	ACCTGC	2 cut(s)	343, 1360
BspPI	GGATC	5 cut(s)	86, 992, 1066, 1133, 2010
BspT107I	GGYRCC	3 cut(s)	33, 949, 1106
BsrBI	CCGCTC	1 cut(s)	236
BsrDI	GCAATG	1 cut(s)	829
BsrFI	RCCGGY	5 cut(s)	36, 186, 313, 865, 1711
BsrI	ACTGG	5 cut(s)	1045, 1112, 1164, 1237, 1540
BssAI	RCCGGY	5 cut(s)	36, 186, 313, 865, 1711
BssECI	CCNNGG	7 cut(s)	48, 100, 106, 511, 945, 2114, 2115
BssHII	GCGCGC	1 cut(s)	8
BssMI	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
BssNI	GRCGYC	2 cut(s)	395, 1768
BssSI	CACGAG	1 cut(s)	1752
BssT1I	CCWWGG	3 cut(s)	48, 106, 945
Bst2BI	CACGAG	1 cut(s)	1752
Bst2UI	CCWGG	1 cut(s)	2116
Bst4CI	ACNGT	2 cut(s)	62, 1085
Bst6I	CTCTTC	2 cut(s)	439, 1337
BstACI	GRCGYC	2 cut(s)	395, 1768
BstAPI	GCANNNNNTGC	1 cut(s)	307
BstC8I	GCNNGC	9 cut(s)	6, 10, 234, 271, 315, 319, 323, 867, 1296
BstDEI	CTNAG	6 cut(s)	597, 837, 870, 1102, 1304, 1488
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	5 cut(s)	282, 472, 613, 685, 1783
BstFNI	CGCG	6 cut(s)	8, 10, 102, 177, 244, 269
BstH2I	RGCGCY	2 cut(s)	404, 1712
BstHHI	GCGC	5 cut(s)	10, 12, 301, 403, 1711
BstKTI	GATC	9 cut(s)	81, 373, 1000, 1061, 1141, 1360, 1513, 1953, 2005
BstMAI	GTCTC	3 cut(s)	689, 1690, 1755
BstMBI	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
BstMCI	CGRYCG	2 cut(s)	187, 191
BstNI	CCWGG	1 cut(s)	2116
BstPAI	GACNNNNGTC	1 cut(s)	1041
BstSCI	CCNGG	5 cut(s)	22, 510, 536, 1051, 2114
BstUI	CGCG	6 cut(s)	8, 10, 102, 177, 244, 269
BstV1I	GCAGC	7 cut(s)	217, 294, 297, 361, 1603, 1718, 2134
BstV2I	GAAGAC	2 cut(s)	1833, 2024
BstX2I	RGATCY	2 cut(s)	78, 2002
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1395
BstYI	RGATCY	2 cut(s)	78, 2002
BstZI	CGGCCG	1 cut(s)	184
Bsu36I	CCTNAGG	1 cut(s)	1102
BsuI	GTATCC	1 cut(s)	526
BsuRI	GGCC	8 cut(s)	105, 186, 273, 541, 881, 1294, 1835, 1929
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1650
BtrI	CACGTC	1 cut(s)	1029
BtsCI	GGATG	5 cut(s)	282, 472, 613, 685, 1783
BtsI	GCAGTG	1 cut(s)	690
BtsIMutI	CAGTG	3 cut(s)	690, 915, 1038
BveI	ACCTGC	2 cut(s)	343, 1360
Cac8I	GCNNGC	9 cut(s)	6, 10, 234, 271, 315, 319, 323, 867, 1296
CaiI	CAGNNNCTG	2 cut(s)	307, 1865
CciI	TCATGA	2 cut(s)	1360, 1513
CfoI	GCGC	5 cut(s)	10, 12, 301, 403, 1711
Cfr10I	RCCGGY	5 cut(s)	36, 186, 313, 865, 1711
Cfr13I	GGNCC	5 cut(s)	58, 271, 540, 1233, 1292
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	2 cut(s)	275, 1776
Csp6I	GTAC	4 cut(s)	34, 439, 1107, 1994
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	9 cut(s)	49, 107, 376, 629, 1361, 1514, 1624, 1643, 2107
CviQI	GTAC	4 cut(s)	34, 439, 1107, 1994
DdeI	CTNAG	6 cut(s)	597, 837, 870, 1102, 1304, 1488
DpnI	GATC	9 cut(s)	80, 372, 999, 1060, 1140, 1359, 1512, 1952, 2004
DpnII	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
DraIII	CACNNNGTG	1 cut(s)	643
EaeI	YGGCCR	3 cut(s)	103, 184, 1927
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	2 cut(s)	439, 1337
EarI	CTCTTC	2 cut(s)	439, 1337
EciI	GGCGGA	4 cut(s)	207, 216, 228, 299
Ecl136II	GAGCTC	1 cut(s)	714
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	3 cut(s)	48, 106, 945
Eco147I	AGGCCT	1 cut(s)	1835
Eco24I	GRGCYC	3 cut(s)	95, 716, 780
Eco32I	GATATC	1 cut(s)	1918
Eco47I	GGWCC	2 cut(s)	58, 1233
Eco52I	CGGCCG	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	714
Eco57I	CTGAAG	2 cut(s)	1845, 1974
Eco81I	CCTNAGG	1 cut(s)	1102
EcoICRI	GAGCTC	1 cut(s)	714
EcoO109I	RGGNCCY	1 cut(s)	1233
EcoRI	GAATTC	1 cut(s)	960
EcoRII	CCWGG	1 cut(s)	2114
EcoRV	GATATC	1 cut(s)	1918
EcoT14I	CCWWGG	3 cut(s)	48, 106, 945
EcoT38I	GRGCYC	3 cut(s)	95, 716, 780
ErhI	CCWWGG	3 cut(s)	48, 106, 945
Esp3I	CGTCTC	1 cut(s)	689
FaeI	CATG	9 cut(s)	52, 110, 379, 632, 1364, 1517, 1627, 1646, 2110
FaqI	GGGAC	6 cut(s)	266, 577, 1219, 1876, 2062, 2097
FatI	CATG	9 cut(s)	48, 106, 375, 628, 1360, 1513, 1623, 1642, 2106
FauI	CCCGC	4 cut(s)	241, 262, 512, 2139
FbaI	TGATCA	2 cut(s)	370, 1510
FblI	GTMKAC	1 cut(s)	1765
FokI	GGATG	5 cut(s)	289, 479, 620, 692, 1790
FriOI	GRGCYC	3 cut(s)	95, 716, 780
FspBI	CTAG	4 cut(s)	957, 981, 1880, 1911
GlaI	GCGC	5 cut(s)	9, 11, 300, 402, 1710
GsaI	CCCAGC	1 cut(s)	1967
GsuI	CTGGAG	1 cut(s)	1710
HaeII	RGCGCY	2 cut(s)	404, 1712
HaeIII	GGCC	8 cut(s)	105, 186, 273, 541, 881, 1294, 1835, 1929
HgaI	GACGC	2 cut(s)	275, 1776
HhaI	GCGC	5 cut(s)	10, 12, 301, 403, 1711
Hin1I	GRCGYC	2 cut(s)	395, 1768
Hin1II	CATG	9 cut(s)	52, 110, 379, 632, 1364, 1517, 1627, 1646, 2110
Hin6I	GCGC	5 cut(s)	8, 10, 299, 401, 1709
HinP1I	GCGC	5 cut(s)	8, 10, 299, 401, 1709
HphI	GGTGA	5 cut(s)	131, 380, 799, 839, 1349
Hpy166II	GTNNAC	1 cut(s)	1766
Hpy8I	GTNNAC	1 cut(s)	1766
Hpy99I	CGWCG	2 cut(s)	400, 1033
HpyAV	CCTTC	5 cut(s)	444, 694, 799, 985, 1846
HpyCH4III	ACNGT	2 cut(s)	62, 1085
HpyCH4IV	ACGT	4 cut(s)	255, 395, 566, 1028
HpyF3I	CTNAG	6 cut(s)	597, 837, 870, 1102, 1304, 1488
HpySE526I	ACGT	4 cut(s)	255, 395, 566, 1028
Hsp92I	GRCGYC	2 cut(s)	395, 1768
Hsp92II	CATG	9 cut(s)	52, 110, 379, 632, 1364, 1517, 1627, 1646, 2110
HspAI	GCGC	5 cut(s)	8, 10, 299, 401, 1709
KpnI	GGTACC	2 cut(s)	37, 1110
KroI	GCCGGC	2 cut(s)	313, 865
KroNI	GCCGGC	2 cut(s)	315, 867
Ksp22I	TGATCA	2 cut(s)	370, 1510
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
LmnI	GCTCC	5 cut(s)	241, 634, 775, 1556, 2119
Lsp1109I	GCAGC	7 cut(s)	217, 294, 297, 361, 1603, 1718, 2134
LweI	GCATC	2 cut(s)	670, 1627
MaeI	CTAG	4 cut(s)	957, 981, 1880, 1911
MaeII	ACGT	4 cut(s)	255, 395, 566, 1028
MaeIII	GTNAC	2 cut(s)	746, 1736
MalI	GATC	9 cut(s)	80, 372, 999, 1060, 1140, 1359, 1512, 1952, 2004
MbiI	CCGCTC	1 cut(s)	236
MboI	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
MflI	RGATCY	2 cut(s)	78, 2002
MhlI	GDGCHC	4 cut(s)	95, 639, 716, 780
MlsI	TGGCCA	1 cut(s)	1929
MluNI	TGGCCA	1 cut(s)	1929
MlyI	GAGTC	6 cut(s)	1169, 1421, 1657, 1808, 2044, 2119
MmeI	TCCRAC	6 cut(s)	56, 153, 510, 742, 1446, 1917
Mox20I	TGGCCA	1 cut(s)	1929
MroNI	GCCGGC	2 cut(s)	313, 865
MroXI	GAANNNNTTC	5 cut(s)	197, 421, 1284, 1398, 1534
MscI	TGGCCA	1 cut(s)	1929
MseI	TTAA	6 cut(s)	876, 1073, 1260, 1326, 1617, 2099
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1929
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 512, 538, 1053, 2116
Mva1269I	GAATGC	1 cut(s)	667
MvaI	CCWGG	1 cut(s)	2116
MvnI	CGCG	6 cut(s)	8, 10, 102, 177, 244, 269
NaeI	GCCGGC	2 cut(s)	315, 867
NciI	CCSGG	4 cut(s)	24, 512, 538, 1053
NcoI	CCATGG	2 cut(s)	48, 106
NdeII	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
NgoMIV	GCCGGC	2 cut(s)	313, 865
NlaIII	CATG	9 cut(s)	52, 110, 379, 632, 1364, 1517, 1627, 1646, 2110
NlaIV	GGNNCC	6 cut(s)	35, 509, 777, 951, 1108, 1235
NmeAIII	GCCGAG	2 cut(s)	747, 947
NmuCI	GTSAC	1 cut(s)	746
PagI	TCATGA	2 cut(s)	1360, 1513
PaqCI	CACCTGC	1 cut(s)	1360
PasI	CCCWGGG	1 cut(s)	2115
PauI	GCGCGC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	1835
PctI	GAATGC	1 cut(s)	667
PdiI	GCCGGC	2 cut(s)	315, 867
PdmI	GAANNNNTTC	5 cut(s)	197, 421, 1284, 1398, 1534
PfeI	GAWTC	5 cut(s)	611, 689, 1285, 1535, 2066
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	6 cut(s)	1168, 1420, 1656, 1808, 2044, 2118
PpsI	GAGTC	6 cut(s)	1168, 1420, 1656, 1808, 2044, 2118
PpuMI	RGGWCCY	1 cut(s)	1233
PshAI	GACNNNNGTC	1 cut(s)	1041
Psp124BI	GAGCTC	1 cut(s)	716
Psp5II	RGGWCCY	1 cut(s)	1233
Psp6I	CCWGG	1 cut(s)	2114
PspFI	CCCAGC	1 cut(s)	1963
PspGI	CCWGG	1 cut(s)	2114
PspN4I	GGNNCC	6 cut(s)	35, 509, 777, 951, 1108, 1235
PspPI	GGNCC	5 cut(s)	58, 271, 540, 1233, 1292
PspPPI	RGGWCCY	1 cut(s)	1233
PstNI	CAGNNNCTG	2 cut(s)	307, 1865
PsuI	RGATCY	2 cut(s)	78, 2002
PteI	GCGCGC	1 cut(s)	8
RsaI	GTAC	4 cut(s)	35, 440, 1108, 1995
RsaNI	GTAC	4 cut(s)	34, 439, 1107, 1994
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	716
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	876, 1073, 1260, 1326, 1617, 2099
Sau3AI	GATC	9 cut(s)	78, 370, 997, 1058, 1138, 1357, 1510, 1950, 2002
Sau96I	GGNCC	5 cut(s)	58, 271, 540, 1233, 1292
SchI	GAGTC	6 cut(s)	1169, 1421, 1657, 1808, 2044, 2119
ScrFI	CCNGG	5 cut(s)	24, 512, 538, 1053, 2116
SduI	GDGCHC	4 cut(s)	95, 639, 716, 780
SfaNI	GCATC	2 cut(s)	670, 1627
Sfr303I	CCGCGG	1 cut(s)	103
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	58, 1233
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1065
SmoI	CTYRAG	1 cut(s)	1065
SseBI	AGGCCT	1 cut(s)	1835
SspMI	CTAG	4 cut(s)	957, 981, 1880, 1911
SstI	GAGCTC	1 cut(s)	716
StuI	AGGCCT	1 cut(s)	1835
StyD4I	CCNGG	5 cut(s)	22, 510, 536, 1051, 2114
StyI	CCWWGG	3 cut(s)	48, 106, 945
TaaI	ACNGT	2 cut(s)	62, 1085
TaiI	ACGT	4 cut(s)	258, 398, 569, 1031
TaqI	TCGA	4 cut(s)	191, 716, 1077, 1611
TauI	GCSGC	8 cut(s)	105, 180, 211, 223, 232, 244, 284, 519
TfiI	GAWTC	5 cut(s)	611, 689, 1285, 1535, 2066
Tru1I	TTAA	6 cut(s)	876, 1073, 1260, 1326, 1617, 2099
Tru9I	TTAA	6 cut(s)	876, 1073, 1260, 1326, 1617, 2099
TscAI	CASTG	3 cut(s)	690, 922, 1045
TseFI	GTSAC	1 cut(s)	746
TseI	GCWGC	7 cut(s)	205, 307, 310, 349, 1591, 1706, 2122
Tsp45I	GTSAC	1 cut(s)	746
TspDTI	ATGAA	4 cut(s)	818, 846, 1287, 1596
TspGWI	ACGGA	2 cut(s)	765, 1452
TspRI	CASTG	3 cut(s)	690, 922, 1045
VpaK11BI	GGWCC	2 cut(s)	58, 1233
XapI	RAATTY	6 cut(s)	938, 960, 1180, 1431, 1563, 1868
XbaI	TCTAGA	1 cut(s)	1879
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1937
XmiI	GTMKAC	1 cut(s)	1765
XmnI	GAANNNNTTC	5 cut(s)	197, 421, 1284, 1398, 1534
XspI	CTAG	4 cut(s)	957, 981, 1880, 1911
ZraI	GACGTC	1 cut(s)	396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.