Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Forward (+)

83433208 .. 83436635

Gene Structure 3428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG489400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGCACGCGCGCCACCGCAATCCCGGAAATGGGTACCGGTCCAATTCCATGGGTATGGACCGTATTGGAATTGGTCGGATCTCGCCGGAGGGCTCACTCCGCGGCCATGGCTATTACAACAACAACTCCGACCCCCCTCACCGCAACAACAACAACAACAACAACAGCAACAACAACTTCAATCGCGGCTACGGCCGGTCGAAATCGTTCCAGACGCCGCCACCTCCGCCGCCGCCGCCGGTGGCTCCGCCGCGAAAGGGGGACGTATTTATGGACGCGGGCCGGATGGCGGCGGAGTATCTGGTGGCGCAGGGGCTGCTGCCGGCGAGCGTGCTGTCGGCAAAGTGGCAGAAGAAGCAGCAGGTAGAGTTTGAGGGTGATCACATGAGAGAGGAGGGGAGGACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGAGGGAGGAGGGTACAGAAGAGGAAGGTTTGGGGGTGTGGATGAGTTCAGTAGTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGCGGCGGGTATGGGTCGGATACCCGGCCCGATTGGTATGGGAGGAGTGGGACGTTTTCGGATAGGCATAGTAGGGCTTCTTCTGAGTGTGAGGATGATTCTGCTTCTGGGAGGCATGAGGAGCACAAGGTGGGGAGAGATGTTGGGAATGCAAGGGAGAGTGAGGAAGCAGTGGATTCGGAGACGAAGGAGGATATGAGCTCGAAGCCGAGTTCTTCTGGTGCAAATGGGAGTGACGGAGTTGTTGTTGGAGTAAATGTGGAGCCCAACAAGGTGAATGATGTAGAGATGAAGGATAAGGATTGTCGCAATGGTGATGAAACTGAGAAACAAAGTGTTGTGGAGGAGTTGCCGGCTCAGGTTAAGGCCGATGGAGAGGGGGATTTGGGTGGTAGGAATGGCACTGATTTGTTGAAACTATGCAAATTCGCCAAGGTGCCTACTAGAATTCGCTCGGCATTGACTACTAGGGGTTTGAAGGTTGATCCACTTCCAATTATCCAAGAGGGAAGCATGTCGTCTGACATTGGTCTGCAACCGGGAGGATCATCTCAAGGTTTAATCGAAAACCGTTCTCTTGATGTTGCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGTTGATCCTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATTAGGTTCTGGATTTGGTATTGAGCAGAATAAGTTTGAAAGGTCCCAGTCATTACCAGATAGAGCTTTTAAGCGTGAGAATGAACAAGAATCGATTCAAGGGCCAGCAGGGCTTAGGAGTTTTAGCTTTGCAGTTAAGGAAAGAGGTGAGAAGAGGACTTTAGAAGATCATGATAAGCAGGTGGAAGCAAAAAAACCAAGAGAATGGCTTCCCTACGCAGAGTCAGATGATTGTTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCATTGGAGGACAACACTTCTCCTGCTGAGAAAGTGATTGTAGCTGTTGATCATGACAGCTCAATGGGAAATGATTCCCAGTTCCGAAAAGATGGAGCTGAAATTTGTGTCGATTATATGCAAGAGAAGCAGCTTTTTCCTAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAGTCGTGATAGTAATTCTGTAATAAACTACACGGATGTCTCTGGAGTGAAGAAAGAAGCAGCACCGGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAGAGCAGTAGACGCCCTGTGGATGTCAAAGGGATAGAAGTAATTGATTTAGAAAATGACTCTATTCCTGAAGACAAGGCCTTCAATAATGCGGAAAGAAAGACAGGGACTGAATTTATACCTCTAGATGGCTTTTCCAACCAACCACAGAACTCTAGTGATATCCCCGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAGTTGCTGGGAAATGATTTCCCTACTTGTTCTTCAGTACCGGAGGATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGCAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGCGAAATACCATTAACCTTCATGAGTCCCTGGGAGCAGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

721

Amino Acids

79.04

Weight (kDa)

4.89

Isoelectric Point (pI)

55.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1369
AatII	GACGTC	1 cut(s)	407
Acc36I	ACCTGC	2 cut(s)	352, 1369
Acc65I	GGTACC	2 cut(s)	33, 1115
AccB1I	GGYRCC	3 cut(s)	33, 958, 1115
AccI	GTMKAC	1 cut(s)	1774
AccII	CGCG	6 cut(s)	8, 10, 102, 186, 253, 278
AclWI	GGATC	5 cut(s)	86, 1001, 1075, 1142, 2019
AcoI	YGGCCR	3 cut(s)	103, 193, 1936
AcsI	RAATTY	6 cut(s)	947, 969, 1189, 1440, 1572, 1877
AcuI	CTGAAG	2 cut(s)	1854, 1983
AcyI	GRCGYC	3 cut(s)	215, 404, 1777
AdeI	CACNNNGTG	1 cut(s)	652
AfaI	GTAC	4 cut(s)	35, 449, 1117, 2004
AfiI	CCNNNNNNNGG	5 cut(s)	29, 30, 257, 289, 1892
AgeI	ACCGGT	2 cut(s)	36, 1720
AgsI	TTSAA	7 cut(s)	181, 937, 1000, 1238, 1298, 1849, 2079
AjnI	CCWGG	1 cut(s)	2123
AluBI	AGCT	7 cut(s)	723, 1265, 1326, 1514, 1530, 1568, 1603
AluI	AGCT	7 cut(s)	723, 1265, 1326, 1514, 1530, 1568, 1603
Alw21I	GWGCWC	2 cut(s)	648, 725
Alw26I	GTCTC	3 cut(s)	698, 1699, 1764
AlwI	GGATC	5 cut(s)	86, 1001, 1075, 1142, 2019
AlwNI	CAGNNNCTG	2 cut(s)	316, 1874
AoxI	GGCC	8 cut(s)	103, 193, 280, 548, 888, 1301, 1842, 1936
ApeKI	GCWGC	6 cut(s)	316, 319, 358, 1600, 1715, 2131
ApoI	RAATTY	6 cut(s)	947, 969, 1189, 1440, 1572, 1877
AsiGI	ACCGGT	2 cut(s)	36, 1720
Asp700I	GAANNNNTTC	5 cut(s)	206, 430, 1293, 1407, 1543
Asp718I	GGTACC	2 cut(s)	33, 1115
AspLEI	GCGC	4 cut(s)	10, 12, 310, 412
AspS9I	GGNCC	6 cut(s)	39, 58, 280, 549, 1242, 1301
AsuC2I	CCSGG	4 cut(s)	24, 521, 547, 1062
AsuHPI	GGTGA	5 cut(s)	131, 389, 808, 848, 1358
AvaII	GGWCC	3 cut(s)	39, 58, 1242
AxyI	CCTNAGG	1 cut(s)	1111
BaeI	ACNNNNGTAYC	2 cut(s)	1107, 1140
BalI	TGGCCA	1 cut(s)	1938
BanI	GGYRCC	3 cut(s)	33, 958, 1115
BanII	GRGCYC	3 cut(s)	95, 725, 789
BarI	GAAGNNNNNNTAC	2 cut(s)	586, 618
BauI	CACGAG	1 cut(s)	1761
BbsI	GAAGAC	2 cut(s)	1842, 2033
Bbv12I	GWGCWC	2 cut(s)	648, 725
BbvI	GCAGC	6 cut(s)	303, 306, 370, 1612, 1727, 2143
BccI	CCATC	6 cut(s)	280, 887, 1556, 1886, 1928, 1937
BceAI	ACGGC	1 cut(s)	208
BcgI	CGANNNNNNTGC	2 cut(s)	681, 715
BciT130I	CCWGG	1 cut(s)	2125
BciVI	GTATCC	1 cut(s)	535
BclI	TGATCA	2 cut(s)	379, 1519
BcnI	CCSGG	4 cut(s)	24, 521, 547, 1062
BcoDI	GTCTC	3 cut(s)	698, 1699, 1764
BfaI	CTAG	4 cut(s)	966, 990, 1889, 1920
BfoI	RGCGCY	1 cut(s)	413
BfuAI	ACCTGC	2 cut(s)	352, 1369
BfuI	GTATCC	1 cut(s)	535
BglI	GCCNNNNNGGC	1 cut(s)	1309
Bme1390I	CCNGG	5 cut(s)	24, 521, 547, 1062, 2125
Bme18I	GGWCC	3 cut(s)	39, 58, 1242
BmgT120I	GGNCC	6 cut(s)	39, 58, 280, 549, 1242, 1301
BmiI	GGNNCC	7 cut(s)	35, 246, 518, 786, 960, 1117, 1244
BmrFI	CCNGG	5 cut(s)	24, 521, 547, 1062, 2125
BmrI	ACTGGG	3 cut(s)	1115, 1240, 1543
BmsI	GCATC	1 cut(s)	1636
BmuI	ACTGGG	3 cut(s)	1115, 1240, 1543
BoxI	GACNNNNGTC	1 cut(s)	1050
BpiI	GAAGAC	2 cut(s)	1842, 2033
BpmI	CTGGAG	1 cut(s)	1719
Bpu10I	CCTNAGC	2 cut(s)	879, 1313
BpuEI	CTTGAG	1 cut(s)	1059
BpuMI	CCSGG	4 cut(s)	24, 521, 547, 1062
Bsa29I	ATCGAT	1 cut(s)	1292
BsaHI	GRCGYC	3 cut(s)	215, 404, 1777
BsaJI	CCNNGG	7 cut(s)	48, 100, 106, 520, 954, 2123, 2124
BsaWI	WCCGGW	3 cut(s)	36, 1720, 2005
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 140, 753, 765, 783, 795
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 30, 257, 289, 1892
Bse118I	RCCGGY	6 cut(s)	36, 195, 238, 322, 874, 1720
Bse1I	ACTGG	4 cut(s)	1121, 1173, 1246, 1549
Bse21I	CCTNAGG	1 cut(s)	1111
Bse3DI	GCAATG	1 cut(s)	838
BseBI	CCWGG	1 cut(s)	2125
BseCI	ATCGAT	1 cut(s)	1292
BseDI	CCNNGG	7 cut(s)	48, 100, 106, 520, 954, 2123, 2124
BseGI	GGATG	5 cut(s)	291, 481, 622, 1696, 1792
BseLI	CCNNNNNNNGG	5 cut(s)	29, 30, 257, 289, 1892
BseMI	GCAATG	1 cut(s)	838
BseMII	CTCAG	5 cut(s)	597, 837, 893, 1125, 1488
BseNI	ACTGG	4 cut(s)	1121, 1173, 1246, 1549
BsePI	GCGCGC	1 cut(s)	8
BseRI	GAGGAG	7 cut(s)	407, 456, 523, 526, 580, 656, 881
BseX3I	CGGCCG	1 cut(s)	193
BseXI	GCAGC	6 cut(s)	303, 306, 370, 1612, 1727, 2143
BseYI	CCCAGC	1 cut(s)	1972
Bsh1236I	CGCG	6 cut(s)	8, 10, 102, 186, 253, 278
Bsh1285I	CGRYCG	2 cut(s)	196, 200
BshFI	GGCC	8 cut(s)	105, 195, 282, 550, 890, 1303, 1844, 1938
BshNI	GGYRCC	3 cut(s)	33, 958, 1115
BshTI	ACCGGT	2 cut(s)	36, 1720
BshVI	ATCGAT	1 cut(s)	1292
BsiEI	CGRYCG	2 cut(s)	196, 200
BsiHKAI	GWGCWC	2 cut(s)	648, 725
BslFI	GGGAC	6 cut(s)	275, 586, 1228, 1885, 2071, 2106
BslI	CCNNNNNNNGG	5 cut(s)	29, 30, 257, 289, 1892
BsmAI	GTCTC	3 cut(s)	698, 1699, 1764
BsmBI	CGTCTC	1 cut(s)	698
BsmFI	GGGAC	6 cut(s)	275, 586, 1228, 1885, 2071, 2106
BsmI	GAATGC	1 cut(s)	676
BsnI	GGCC	8 cut(s)	105, 195, 282, 550, 890, 1303, 1844, 1938
Bsp1286I	GDGCHC	4 cut(s)	95, 648, 725, 789
Bsp143I	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	8 cut(s)	105, 195, 282, 550, 890, 1303, 1844, 1938
BspCNI	CTCAG	5 cut(s)	598, 838, 892, 1124, 1489
BspDI	ATCGAT	1 cut(s)	1292
BspFNI	CGCG	6 cut(s)	8, 10, 102, 186, 253, 278
BspHI	TCATGA	3 cut(s)	1369, 1522, 2115
BspLI	GGNNCC	7 cut(s)	35, 246, 518, 786, 960, 1117, 1244
BspMI	ACCTGC	2 cut(s)	352, 1369
BspPI	GGATC	5 cut(s)	86, 1001, 1075, 1142, 2019
BspT107I	GGYRCC	3 cut(s)	33, 958, 1115
BsrDI	GCAATG	1 cut(s)	838
BsrFI	RCCGGY	6 cut(s)	36, 195, 238, 322, 874, 1720
BsrI	ACTGG	4 cut(s)	1121, 1173, 1246, 1549
BssAI	RCCGGY	6 cut(s)	36, 195, 238, 322, 874, 1720
BssECI	CCNNGG	7 cut(s)	48, 100, 106, 520, 954, 2123, 2124
BssHII	GCGCGC	1 cut(s)	8
BssMI	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
BssNI	GRCGYC	3 cut(s)	215, 404, 1777
BssSI	CACGAG	1 cut(s)	1761
BssT1I	CCWWGG	3 cut(s)	48, 106, 954
Bst2BI	CACGAG	1 cut(s)	1761
Bst2UI	CCWGG	1 cut(s)	2125
Bst4CI	ACNGT	2 cut(s)	62, 1094
Bst6I	CTCTTC	2 cut(s)	448, 1346
BstACI	GRCGYC	3 cut(s)	215, 404, 1777
BstAPI	GCANNNNNTGC	1 cut(s)	316
BstC8I	GCNNGC	8 cut(s)	6, 10, 280, 324, 328, 332, 876, 1305
BstDEI	CTNAG	6 cut(s)	606, 846, 879, 1111, 1313, 1497
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	5 cut(s)	291, 481, 622, 1696, 1792
BstFNI	CGCG	6 cut(s)	8, 10, 102, 186, 253, 278
BstH2I	RGCGCY	1 cut(s)	413
BstHHI	GCGC	4 cut(s)	10, 12, 310, 412
BstKTI	GATC	9 cut(s)	81, 382, 1009, 1070, 1150, 1369, 1522, 1962, 2014
BstMAI	GTCTC	3 cut(s)	698, 1699, 1764
BstMBI	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
BstMCI	CGRYCG	2 cut(s)	196, 200
BstNI	CCWGG	1 cut(s)	2125
BstNSI	RCATGY	1 cut(s)	1039
BstPAI	GACNNNNGTC	1 cut(s)	1050
BstSCI	CCNGG	5 cut(s)	22, 519, 545, 1060, 2123
BstUI	CGCG	6 cut(s)	8, 10, 102, 186, 253, 278
BstV1I	GCAGC	6 cut(s)	303, 306, 370, 1612, 1727, 2143
BstV2I	GAAGAC	2 cut(s)	1842, 2033
BstX2I	RGATCY	2 cut(s)	78, 2011
BstXI	CCANNNNNNTGG	3 cut(s)	49, 55, 1404
BstYI	RGATCY	2 cut(s)	78, 2011
BstZI	CGGCCG	1 cut(s)	193
Bsu15I	ATCGAT	1 cut(s)	1292
Bsu36I	CCTNAGG	1 cut(s)	1111
BsuI	GTATCC	1 cut(s)	535
BsuRI	GGCC	8 cut(s)	105, 195, 282, 550, 890, 1303, 1844, 1938
BsuTUI	ATCGAT	1 cut(s)	1292
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1659
BtsCI	GGATG	5 cut(s)	291, 481, 622, 1696, 1792
BtsI	GCAGTG	1 cut(s)	699
BtsIMutI	CAGTG	2 cut(s)	699, 924
BveI	ACCTGC	2 cut(s)	352, 1369
Cac8I	GCNNGC	8 cut(s)	6, 10, 280, 324, 328, 332, 876, 1305
CaiI	CAGNNNCTG	2 cut(s)	316, 1874
CciI	TCATGA	3 cut(s)	1369, 1522, 2115
CfoI	GCGC	4 cut(s)	10, 12, 310, 412
Cfr10I	RCCGGY	6 cut(s)	36, 195, 238, 322, 874, 1720
Cfr13I	GGNCC	6 cut(s)	39, 58, 280, 549, 1242, 1301
Cfr42I	CCGCGG	1 cut(s)	103
ClaI	ATCGAT	1 cut(s)	1292
CseI	GACGC	3 cut(s)	223, 284, 1785
Csp6I	GTAC	4 cut(s)	34, 448, 1116, 2003
CspAI	ACCGGT	2 cut(s)	36, 1720
CviQI	GTAC	4 cut(s)	34, 448, 1116, 2003
DdeI	CTNAG	6 cut(s)	606, 846, 879, 1111, 1313, 1497
DpnI	GATC	9 cut(s)	80, 381, 1008, 1069, 1149, 1368, 1521, 1961, 2013
DpnII	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
DraIII	CACNNNGTG	1 cut(s)	652
EaeI	YGGCCR	3 cut(s)	103, 193, 1936
EagI	CGGCCG	1 cut(s)	193
Eam1104I	CTCTTC	2 cut(s)	448, 1346
EarI	CTCTTC	2 cut(s)	448, 1346
EciI	GGCGGA	3 cut(s)	216, 237, 308
Ecl136II	GAGCTC	1 cut(s)	723
EclXI	CGGCCG	1 cut(s)	193
Eco130I	CCWWGG	3 cut(s)	48, 106, 954
Eco147I	AGGCCT	1 cut(s)	1844
Eco24I	GRGCYC	3 cut(s)	95, 725, 789
Eco32I	GATATC	1 cut(s)	1927
Eco47I	GGWCC	3 cut(s)	39, 58, 1242
Eco52I	CGGCCG	1 cut(s)	193
Eco53kI	GAGCTC	1 cut(s)	723
Eco57I	CTGAAG	2 cut(s)	1854, 1983
Eco81I	CCTNAGG	1 cut(s)	1111
EcoICRI	GAGCTC	1 cut(s)	723
EcoO109I	RGGNCCY	1 cut(s)	1242
EcoRI	GAATTC	1 cut(s)	969
EcoRII	CCWGG	1 cut(s)	2123
EcoRV	GATATC	1 cut(s)	1927
EcoT14I	CCWWGG	3 cut(s)	48, 106, 954
EcoT38I	GRGCYC	3 cut(s)	95, 725, 789
ErhI	CCWWGG	3 cut(s)	48, 106, 954
Esp3I	CGTCTC	1 cut(s)	698
FaqI	GGGAC	6 cut(s)	275, 586, 1228, 1885, 2071, 2106
FauI	CCCGC	3 cut(s)	271, 521, 2148
FbaI	TGATCA	2 cut(s)	379, 1519
FblI	GTMKAC	1 cut(s)	1774
FokI	GGATG	5 cut(s)	298, 488, 629, 1703, 1799
FriOI	GRGCYC	3 cut(s)	95, 725, 789
FspBI	CTAG	4 cut(s)	966, 990, 1889, 1920
GlaI	GCGC	4 cut(s)	9, 11, 309, 411
GsaI	CCCAGC	1 cut(s)	1976
GsuI	CTGGAG	1 cut(s)	1719
HaeII	RGCGCY	1 cut(s)	413
HaeIII	GGCC	8 cut(s)	105, 195, 282, 550, 890, 1303, 1844, 1938
HgaI	GACGC	3 cut(s)	223, 284, 1785
HhaI	GCGC	4 cut(s)	10, 12, 310, 412
Hin1I	GRCGYC	3 cut(s)	215, 404, 1777
Hin6I	GCGC	4 cut(s)	8, 10, 308, 410
HinP1I	GCGC	4 cut(s)	8, 10, 308, 410
HphI	GGTGA	5 cut(s)	131, 389, 808, 848, 1358
Hpy166II	GTNNAC	1 cut(s)	1775
Hpy8I	GTNNAC	1 cut(s)	1775
Hpy99I	CGWCG	1 cut(s)	409
HpyAV	CCTTC	6 cut(s)	453, 703, 808, 994, 1855, 2122
HpyCH4III	ACNGT	2 cut(s)	62, 1094
HpyCH4IV	ACGT	3 cut(s)	264, 404, 575
HpyF3I	CTNAG	6 cut(s)	606, 846, 879, 1111, 1313, 1497
HpySE526I	ACGT	3 cut(s)	264, 404, 575
Hsp92I	GRCGYC	3 cut(s)	215, 404, 1777
HspAI	GCGC	4 cut(s)	8, 10, 308, 410
KpnI	GGTACC	2 cut(s)	37, 1119
KroI	GCCGGC	2 cut(s)	322, 874
KroNI	GCCGGC	2 cut(s)	324, 876
Ksp22I	TGATCA	2 cut(s)	379, 1519
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
LmnI	GCTCC	5 cut(s)	250, 643, 784, 1565, 2128
Lsp1109I	GCAGC	6 cut(s)	303, 306, 370, 1612, 1727, 2143
LweI	GCATC	1 cut(s)	1636
MaeI	CTAG	4 cut(s)	966, 990, 1889, 1920
MaeII	ACGT	3 cut(s)	264, 404, 575
MaeIII	GTNAC	2 cut(s)	755, 1745
MalI	GATC	9 cut(s)	80, 381, 1008, 1069, 1149, 1368, 1521, 1961, 2013
MboI	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
MflI	RGATCY	2 cut(s)	78, 2011
MhlI	GDGCHC	4 cut(s)	95, 648, 725, 789
MlsI	TGGCCA	1 cut(s)	1938
MluNI	TGGCCA	1 cut(s)	1938
MlyI	GAGTC	6 cut(s)	1178, 1430, 1666, 1817, 2053, 2128
MmeI	TCCRAC	5 cut(s)	56, 153, 519, 751, 1926
Mox20I	TGGCCA	1 cut(s)	1938
MroNI	GCCGGC	2 cut(s)	322, 874
MroXI	GAANNNNTTC	5 cut(s)	206, 430, 1293, 1407, 1543
MscI	TGGCCA	1 cut(s)	1938
MseI	TTAA	6 cut(s)	885, 1082, 1269, 1335, 1626, 2108
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1938
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 521, 547, 1062, 2125
Mva1269I	GAATGC	1 cut(s)	676
MvaI	CCWGG	1 cut(s)	2125
MvnI	CGCG	6 cut(s)	8, 10, 102, 186, 253, 278
NaeI	GCCGGC	2 cut(s)	324, 876
NciI	CCSGG	4 cut(s)	24, 521, 547, 1062
NcoI	CCATGG	2 cut(s)	48, 106
NdeII	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
NgoMIV	GCCGGC	2 cut(s)	322, 874
NlaIV	GGNNCC	7 cut(s)	35, 246, 518, 786, 960, 1117, 1244
NmeAIII	GCCGAG	2 cut(s)	756, 956
NmuCI	GTSAC	1 cut(s)	755
NspI	RCATGY	1 cut(s)	1039
PagI	TCATGA	3 cut(s)	1369, 1522, 2115
PaqCI	CACCTGC	1 cut(s)	1369
PasI	CCCWGGG	1 cut(s)	2124
PauI	GCGCGC	1 cut(s)	8
PceI	AGGCCT	1 cut(s)	1844
PctI	GAATGC	1 cut(s)	676
PdiI	GCCGGC	2 cut(s)	324, 876
PdmI	GAANNNNTTC	5 cut(s)	206, 430, 1293, 1407, 1543
PfeI	GAWTC	6 cut(s)	620, 698, 1289, 1294, 1544, 2075
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	2 cut(s)	36, 1720
PleI	GAGTC	6 cut(s)	1177, 1429, 1665, 1817, 2053, 2127
PpsI	GAGTC	6 cut(s)	1177, 1429, 1665, 1817, 2053, 2127
PpuMI	RGGWCCY	1 cut(s)	1242
PshAI	GACNNNNGTC	1 cut(s)	1050
Psp124BI	GAGCTC	1 cut(s)	725
Psp5II	RGGWCCY	1 cut(s)	1242
Psp6I	CCWGG	1 cut(s)	2123
PspFI	CCCAGC	1 cut(s)	1972
PspGI	CCWGG	1 cut(s)	2123
PspN4I	GGNNCC	7 cut(s)	35, 246, 518, 786, 960, 1117, 1244
PspPI	GGNCC	6 cut(s)	39, 58, 280, 549, 1242, 1301
PspPPI	RGGWCCY	1 cut(s)	1242
PstNI	CAGNNNCTG	2 cut(s)	316, 1874
PsuI	RGATCY	2 cut(s)	78, 2011
PteI	GCGCGC	1 cut(s)	8
RsaI	GTAC	4 cut(s)	35, 449, 1117, 2004
RsaNI	GTAC	4 cut(s)	34, 448, 1116, 2003
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	725
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	885, 1082, 1269, 1335, 1626, 2108
Sau3AI	GATC	9 cut(s)	78, 379, 1006, 1067, 1147, 1366, 1519, 1959, 2011
Sau96I	GGNCC	6 cut(s)	39, 58, 280, 549, 1242, 1301
SchI	GAGTC	6 cut(s)	1178, 1430, 1666, 1817, 2053, 2128
ScrFI	CCNGG	5 cut(s)	24, 521, 547, 1062, 2125
SduI	GDGCHC	4 cut(s)	95, 648, 725, 789
SfaNI	GCATC	1 cut(s)	1636
Sfr303I	CCGCGG	1 cut(s)	103
SgrAI	CRCCGGYG	1 cut(s)	238
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	3 cut(s)	39, 58, 1242
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1074
SmoI	CTYRAG	1 cut(s)	1074
SseBI	AGGCCT	1 cut(s)	1844
SspMI	CTAG	4 cut(s)	966, 990, 1889, 1920
SstI	GAGCTC	1 cut(s)	725
StuI	AGGCCT	1 cut(s)	1844
StyD4I	CCNGG	5 cut(s)	22, 519, 545, 1060, 2123
StyI	CCWWGG	3 cut(s)	48, 106, 954
TaaI	ACNGT	2 cut(s)	62, 1094
TaiI	ACGT	3 cut(s)	267, 407, 578
TaqI	TCGA	6 cut(s)	200, 725, 1086, 1292, 1581, 1620
TauI	GCSGC	9 cut(s)	105, 189, 220, 232, 235, 238, 253, 293, 528
TfiI	GAWTC	6 cut(s)	620, 698, 1289, 1294, 1544, 2075
Tru1I	TTAA	6 cut(s)	885, 1082, 1269, 1335, 1626, 2108
Tru9I	TTAA	6 cut(s)	885, 1082, 1269, 1335, 1626, 2108
TscAI	CASTG	2 cut(s)	699, 931
TseFI	GTSAC	1 cut(s)	755
TseI	GCWGC	6 cut(s)	316, 319, 358, 1600, 1715, 2131
Tsp45I	GTSAC	1 cut(s)	755
TspDTI	ATGAA	5 cut(s)	827, 855, 1296, 1605, 2104
TspGWI	ACGGA	2 cut(s)	774, 1703
TspRI	CASTG	2 cut(s)	699, 931
VpaK11BI	GGWCC	3 cut(s)	39, 58, 1242
XapI	RAATTY	6 cut(s)	947, 969, 1189, 1440, 1572, 1877
XbaI	TCTAGA	1 cut(s)	1888
XceI	RCATGY	1 cut(s)	1039
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1946
XmiI	GTMKAC	1 cut(s)	1774
XmnI	GAANNNNTTC	5 cut(s)	206, 430, 1293, 1407, 1543
XspI	CTAG	4 cut(s)	966, 990, 1889, 1920
ZraI	GACGTC	1 cut(s)	405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.