Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0004367

Physical Location & Seq

Genomic Coordinates Forward (+)

81122498 .. 81125882

Gene Structure 3385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG523000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCACGCCCGCCACCGCAATCCCGGAAATGGGTACCGGTCTAATTCCATGGGTATGGACCGTATCGGAATGGGTCGGATCTCGCCGGAGGGCTCACTCCGCGGCCATGGCTATTACAACAACAACAGCTCCGACCCCCCTCACCGCAACTTCAATCGCGGCTACGGCCGGTCGAAATCGTTCCAGCCGCCGCCAGCTCCGCCGCGAAAGGGGGACGTCTTTATGGACGCGGGCCGGATGGCGGCGGAGTATCTGGTGGCGCAGGGGCTGCTGCCGGCGAGCGTGCTGTCGGCAAAGTGGCAGAAGAAGCAGCAGGTAGAGTTTGAGGGTGATCACATGAGAGAGGAGGGGAGGACGTCGGCGCTTTCCCGATTAGGAAATGTTTCGGAGGGAGGAGGGTACAGAAGAGGAAGGTTTGGGGGTGTGGATGAGTTCAGTAGTAGTAATGCGAGGAATAAGGGGAGGAGGAGGAACCGGGGCGGCGGGTATGGGTCGGATACCCGGCCCGATTGGTATGGGAGGAGTGGGACGTTTTCGGATAGGCATAGTAGGGCTTCTTCTGAGTGTGAGGATGATTCTGCTTCTGGGAGGCATGAGGAGCACAAGGTGGGGAGAGATGTTGGGAATGCAAGGGAGAGTGAGGATGCAGTGGATTCGGAGACGAAGGAGGATATGAGCTCGAAGCCGAGTTCTTCTGGTGCAAGTGGGAGTGATGGAGTTGTTGTTGGAGTAAATGTGGAGCCCAACAAGGTGAATGATGTAGAGATGAAGGATAAGGATTGTGGCAATGGTGATGAAACTGAGAAACAGAGTGTTGTGGAGGAGTTGCCGGTTCAGGTTAAGGCCAAGGGAGAGGGGGATTTGGGTGGTAGGAATGCCACTGATTTGTTGAAACTATGCAAATTCGCCAAGGTGCCTACTAGAATTCGCTCGGCATTGACTACTAGGGGTTTGAAGGTTGATCCACTTCCAATTATCCAAGAGGGAAGCACGTCGTCTGACATTGGTCTGCAACCGGGAGGATCATCTCAAGGTTTAATCGAAAACCGTTCTCTTGATGTTGCCTCAGGTACCCCAGTATTAGATAACTCTCATTATGTTGATCCTGAAACTTCTAAAGTTGAGTCCAGTCAATCTGTTGAGAATTTGGTAGAATTAGGTTCTGGATTTGGTATTGAGCAGAATAAGTTTGAAAGGTCCCAGTCATTACCAGATAGAGCTTTTAAGCGTGAGAATGAACAAGAATTGATTCAAGGGCCAGCAGGGCTTAGGAGTTTTAGCTTTGCAGTTAAGGAAAGAGGTGAGAAGAGGGCTTTAGAAGACCATGATAAGCAGGTGGAAGCAAAAAAACCAAGAGAATGGCTTCCCTACGCAGAGTCAGATGATTGTTTCCAAATTTCCAATTTGAGCGAAAAGAAAGCAAGTCCATTGGAGGACAACACTTCTCCTGCTGAGAAAGTGATTGTAGCTGTTGATCATGACAGCTCAATGGGAAATGATTCCCAGTTCCGAAAAGATGAAGCTGAAATTTGTGTCGATTATATGCAAGAGAAGCAGCTTTTTCCTAATTCATTCGACCTTAATCTCATGGAGGTTAGCGATGCACATGAGAGTCGTGATAGTAATTCTGTAATAAACTACACGGATGTCTCTGGAGTGAAGAAAGAAGCAGCGCCGGTTGATATTGACTTGTCAATGAGTAACTGCAATATGTCTCGTGAGAGCAGTAGACGCCCTGTGGATGTCAAAGGGATAGAAGTAATTGATTTAGAAAATGACTGTATTCCTGAAGACAAGGCCTTCAATAATGCGGAAAGAAAGACAGGGACTGAATTTATACCTCTAGATGGCTTTTCCAACCAAGCACAGAACTCTAGTGATATCCCCGATGGCCAAGATGGTTATGGGCTAATGATCTCGGAGTTGCTGGGAAATGATTTCCCTACTTGTTCTTCAGTACCGGAGGATCTTACTCCAATGCCTAACGATATTGGTCTTCCTAATGCAGAGGGGACTCTTGCAGATGATGATTCAATATATATGGCTCTGGGCGAAATACCATTAACCTTCATGAGTCCCTGGGAGCGGCCACCCCCGCAAGAGTATGAGAAGCCCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

706

Amino Acids

77.4

Weight (kDa)

4.91

Isoelectric Point (pI)

54.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004367)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26450 AT4G26450
fragaria_vesca	FvH4_3g41520 FvH4_3g41520
malus_domestica	MD03G1043600.v1.1 MD11G1047100.v1.1
prunus_persica	Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1 Prupe.6G035900_v2.0.a1
pyrus_communis	pycom03g03370 pycom11g03820
rosa_chinensis	RchiOBHm_Chr5g0074471
rosa_laevigata	RLG00000036482
rosa_multiflora	Rmu_co8239039.1_g000001 Rmu_sc0001467.1_g000022
rosa_roxburghii	Rroxscaffold_1G00007030
rosa_rugosa	Rorug05G0432100 Rorug05G0432200 Rorug05G0432200 Rorug05G0432300
rosa_samantha	Rh5AG489400 Rh5BG510400 Rh5CG534200 Rh5DG523000
rosa_wichuraiana	Rw5G045380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1324
AatII	GACGTC	2 cut(s)	219, 359
Acc36I	ACCTGC	2 cut(s)	304, 1324
Acc65I	GGTACC	2 cut(s)	33, 1070
AccB1I	GGYRCC	3 cut(s)	33, 913, 1070
AccBSI	CCGCTC	1 cut(s)	2086
AccI	GTMKAC	1 cut(s)	1729
AccII	CGCG	4 cut(s)	102, 159, 205, 230
AclWI	GGATC	5 cut(s)	86, 956, 1030, 1097, 1974
AcoI	YGGCCR	4 cut(s)	103, 166, 1891, 2087
AcsI	RAATTY	6 cut(s)	902, 924, 1144, 1395, 1527, 1832
AcuI	CTGAAG	2 cut(s)	1809, 1938
AcyI	GRCGYC	3 cut(s)	216, 356, 1732
AdeI	CACNNNGTG	1 cut(s)	607
AfaI	GTAC	4 cut(s)	35, 401, 1072, 1959
AfiI	CCNNNNNNNGG	6 cut(s)	29, 30, 209, 241, 1847, 2085
AgeI	ACCGGT	1 cut(s)	36
AgsI	TTSAA	7 cut(s)	154, 892, 955, 1193, 1253, 1804, 2034
AjiI	CACGTC	1 cut(s)	993
AjnI	CCWGG	1 cut(s)	2078
AluBI	AGCT	9 cut(s)	129, 197, 678, 1220, 1281, 1469, 1485, 1523, 1558
AluI	AGCT	9 cut(s)	129, 197, 678, 1220, 1281, 1469, 1485, 1523, 1558
Alw21I	GWGCWC	2 cut(s)	603, 680
Alw26I	GTCTC	3 cut(s)	653, 1654, 1719
AlwI	GGATC	5 cut(s)	86, 956, 1030, 1097, 1974
AlwNI	CAGNNNCTG	2 cut(s)	268, 1829
AoxI	GGCC	9 cut(s)	103, 166, 232, 503, 843, 1256, 1797, 1891, 2087
ApeKI	GCWGC	5 cut(s)	268, 271, 310, 1555, 1670
ApoI	RAATTY	6 cut(s)	902, 924, 1144, 1395, 1527, 1832
AsiGI	ACCGGT	1 cut(s)	36
Asp700I	GAANNNNTTC	5 cut(s)	179, 382, 1248, 1362, 1498
Asp718I	GGTACC	2 cut(s)	33, 1070
AspLEI	GCGC	3 cut(s)	262, 364, 1675
AspS9I	GGNCC	5 cut(s)	58, 232, 504, 1197, 1256
AsuC2I	CCSGG	4 cut(s)	24, 476, 502, 1017
AsuHPI	GGTGA	5 cut(s)	134, 341, 763, 803, 1313
AvaII	GGWCC	2 cut(s)	58, 1197
AxyI	CCTNAGG	1 cut(s)	1066
BaeI	ACNNNNGTAYC	2 cut(s)	1062, 1095
BalI	TGGCCA	1 cut(s)	1893
BanI	GGYRCC	3 cut(s)	33, 913, 1070
BanII	GRGCYC	3 cut(s)	95, 680, 744
BarI	GAAGNNNNNNTAC	2 cut(s)	541, 573
BauI	CACGAG	1 cut(s)	1716
BbsI	GAAGAC	3 cut(s)	1326, 1797, 1988
Bbv12I	GWGCWC	2 cut(s)	603, 680
BbvI	GCAGC	5 cut(s)	255, 258, 322, 1567, 1682
BccI	CCATC	5 cut(s)	232, 707, 1841, 1883, 1892
BceAI	ACGGC	1 cut(s)	181
BcgI	CGANNNNNNTGC	2 cut(s)	636, 670
BciT130I	CCWGG	1 cut(s)	2080
BciVI	GTATCC	1 cut(s)	490
BclI	TGATCA	2 cut(s)	331, 1474
BcnI	CCSGG	4 cut(s)	24, 476, 502, 1017
BcoDI	GTCTC	3 cut(s)	653, 1654, 1719
BfaI	CTAG	4 cut(s)	921, 945, 1844, 1875
BfoI	RGCGCY	2 cut(s)	365, 1676
BfuAI	ACCTGC	2 cut(s)	304, 1324
BfuI	GTATCC	1 cut(s)	490
BglI	GCCNNNNNGGC	1 cut(s)	1264
Bme1390I	CCNGG	5 cut(s)	24, 476, 502, 1017, 2080
Bme18I	GGWCC	2 cut(s)	58, 1197
BmgBI	CACGTC	1 cut(s)	993
BmgT120I	GGNCC	5 cut(s)	58, 232, 504, 1197, 1256
BmiI	GGNNCC	6 cut(s)	35, 473, 741, 915, 1072, 1199
BmrFI	CCNGG	5 cut(s)	24, 476, 502, 1017, 2080
BmrI	ACTGGG	3 cut(s)	1070, 1195, 1498
BmsI	GCATC	2 cut(s)	634, 1591
BmuI	ACTGGG	3 cut(s)	1070, 1195, 1498
BoxI	GACNNNNGTC	1 cut(s)	1005
BpiI	GAAGAC	3 cut(s)	1326, 1797, 1988
BpmI	CTGGAG	1 cut(s)	1674
Bpu10I	CCTNAGC	1 cut(s)	1268
BpuEI	CTTGAG	1 cut(s)	1014
BpuMI	CCSGG	4 cut(s)	24, 476, 502, 1017
BsaHI	GRCGYC	3 cut(s)	216, 356, 1732
BsaJI	CCNNGG	8 cut(s)	48, 100, 106, 475, 846, 909, 2078, 2079
BsaWI	WCCGGW	2 cut(s)	36, 1960
BsaXI	ACNNNNNCTCC	6 cut(s)	113, 143, 708, 720, 738, 750
Bsc4I	CCNNNNNNNGG	6 cut(s)	29, 30, 209, 241, 1847, 2085
Bse118I	RCCGGY	5 cut(s)	36, 168, 274, 829, 1675
Bse1I	ACTGG	4 cut(s)	1076, 1128, 1201, 1504
Bse21I	CCTNAGG	1 cut(s)	1066
Bse3DI	GCAATG	1 cut(s)	793
BseBI	CCWGG	1 cut(s)	2080
BseDI	CCNNGG	8 cut(s)	48, 100, 106, 475, 846, 909, 2078, 2079
BseGI	GGATG	6 cut(s)	243, 433, 577, 649, 1651, 1747
BseLI	CCNNNNNNNGG	6 cut(s)	29, 30, 209, 241, 1847, 2085
BseMI	GCAATG	1 cut(s)	793
BseMII	CTCAG	4 cut(s)	552, 792, 1080, 1443
BseNI	ACTGG	4 cut(s)	1076, 1128, 1201, 1504
BseRI	GAGGAG	7 cut(s)	359, 408, 478, 481, 535, 611, 836
BseX3I	CGGCCG	1 cut(s)	166
BseXI	GCAGC	5 cut(s)	255, 258, 322, 1567, 1682
BseYI	CCCAGC	1 cut(s)	1927
Bsh1236I	CGCG	4 cut(s)	102, 159, 205, 230
Bsh1285I	CGRYCG	2 cut(s)	169, 173
BshFI	GGCC	9 cut(s)	105, 168, 234, 505, 845, 1258, 1799, 1893, 2089
BshNI	GGYRCC	3 cut(s)	33, 913, 1070
BshTI	ACCGGT	1 cut(s)	36
BsiEI	CGRYCG	2 cut(s)	169, 173
BsiHKAI	GWGCWC	2 cut(s)	603, 680
BslFI	GGGAC	6 cut(s)	227, 541, 1183, 1840, 2026, 2061
BslI	CCNNNNNNNGG	6 cut(s)	29, 30, 209, 241, 1847, 2085
BsmAI	GTCTC	3 cut(s)	653, 1654, 1719
BsmBI	CGTCTC	1 cut(s)	653
BsmFI	GGGAC	6 cut(s)	227, 541, 1183, 1840, 2026, 2061
BsmI	GAATGC	2 cut(s)	631, 880
BsnI	GGCC	9 cut(s)	105, 168, 234, 505, 845, 1258, 1799, 1893, 2089
Bsp1286I	GDGCHC	4 cut(s)	95, 603, 680, 744
Bsp143I	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
Bsp19I	CCATGG	2 cut(s)	48, 106
BspANI	GGCC	9 cut(s)	105, 168, 234, 505, 845, 1258, 1799, 1893, 2089
BspCNI	CTCAG	4 cut(s)	553, 793, 1079, 1444
BspFNI	CGCG	4 cut(s)	102, 159, 205, 230
BspHI	TCATGA	2 cut(s)	1477, 2070
BspLI	GGNNCC	6 cut(s)	35, 473, 741, 915, 1072, 1199
BspMI	ACCTGC	2 cut(s)	304, 1324
BspPI	GGATC	5 cut(s)	86, 956, 1030, 1097, 1974
BspT107I	GGYRCC	3 cut(s)	33, 913, 1070
BsrBI	CCGCTC	1 cut(s)	2086
BsrDI	GCAATG	1 cut(s)	793
BsrFI	RCCGGY	5 cut(s)	36, 168, 274, 829, 1675
BsrI	ACTGG	4 cut(s)	1076, 1128, 1201, 1504
BssAI	RCCGGY	5 cut(s)	36, 168, 274, 829, 1675
BssECI	CCNNGG	8 cut(s)	48, 100, 106, 475, 846, 909, 2078, 2079
BssMI	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
BssNI	GRCGYC	3 cut(s)	216, 356, 1732
BssSI	CACGAG	1 cut(s)	1716
BssT1I	CCWWGG	4 cut(s)	48, 106, 846, 909
Bst2BI	CACGAG	1 cut(s)	1716
Bst2UI	CCWGG	1 cut(s)	2080
Bst4CI	ACNGT	3 cut(s)	62, 1049, 1781
Bst6I	CTCTTC	2 cut(s)	400, 1301
BstACI	GRCGYC	3 cut(s)	216, 356, 1732
BstAPI	GCANNNNNTGC	1 cut(s)	268
BstC8I	GCNNGC	8 cut(s)	6, 10, 195, 232, 276, 280, 284, 1260
BstDEI	CTNAG	5 cut(s)	561, 801, 1066, 1268, 1452
BstDSI	CCRYGG	3 cut(s)	48, 100, 106
BstF5I	GGATG	6 cut(s)	243, 433, 577, 649, 1651, 1747
BstFNI	CGCG	4 cut(s)	102, 159, 205, 230
BstH2I	RGCGCY	2 cut(s)	365, 1676
BstHHI	GCGC	3 cut(s)	262, 364, 1675
BstKTI	GATC	8 cut(s)	81, 334, 964, 1025, 1105, 1477, 1917, 1969
BstMAI	GTCTC	3 cut(s)	653, 1654, 1719
BstMBI	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
BstMCI	CGRYCG	2 cut(s)	169, 173
BstNI	CCWGG	1 cut(s)	2080
BstPAI	GACNNNNGTC	1 cut(s)	1005
BstSCI	CCNGG	5 cut(s)	22, 474, 500, 1015, 2078
BstUI	CGCG	4 cut(s)	102, 159, 205, 230
BstV1I	GCAGC	5 cut(s)	255, 258, 322, 1567, 1682
BstV2I	GAAGAC	3 cut(s)	1326, 1797, 1988
BstX2I	RGATCY	2 cut(s)	78, 1966
BstXI	CCANNNNNNTGG	2 cut(s)	55, 1359
BstYI	RGATCY	2 cut(s)	78, 1966
BstZI	CGGCCG	1 cut(s)	166
Bsu36I	CCTNAGG	1 cut(s)	1066
BsuI	GTATCC	1 cut(s)	490
BsuRI	GGCC	9 cut(s)	105, 168, 234, 505, 845, 1258, 1799, 1893, 2089
BtgI	CCRYGG	3 cut(s)	48, 100, 106
BtgZI	GCGATG	1 cut(s)	1614
BtrI	CACGTC	1 cut(s)	993
BtsCI	GGATG	6 cut(s)	243, 433, 577, 649, 1651, 1747
BtsI	GCAGTG	1 cut(s)	654
BtsIMutI	CAGTG	2 cut(s)	654, 879
BveI	ACCTGC	2 cut(s)	304, 1324
Cac8I	GCNNGC	8 cut(s)	6, 10, 195, 232, 276, 280, 284, 1260
CaiI	CAGNNNCTG	2 cut(s)	268, 1829
CciI	TCATGA	2 cut(s)	1477, 2070
CfoI	GCGC	3 cut(s)	262, 364, 1675
Cfr10I	RCCGGY	5 cut(s)	36, 168, 274, 829, 1675
Cfr13I	GGNCC	5 cut(s)	58, 232, 504, 1197, 1256
Cfr42I	CCGCGG	1 cut(s)	103
CseI	GACGC	2 cut(s)	236, 1740
Csp6I	GTAC	4 cut(s)	34, 400, 1071, 1958
CspAI	ACCGGT	1 cut(s)	36
CviAII	CATG	9 cut(s)	49, 107, 337, 593, 1325, 1478, 1588, 1607, 2071
CviQI	GTAC	4 cut(s)	34, 400, 1071, 1958
DdeI	CTNAG	5 cut(s)	561, 801, 1066, 1268, 1452
DpnI	GATC	8 cut(s)	80, 333, 963, 1024, 1104, 1476, 1916, 1968
DpnII	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
DraIII	CACNNNGTG	1 cut(s)	607
EaeI	YGGCCR	4 cut(s)	103, 166, 1891, 2087
EagI	CGGCCG	1 cut(s)	166
Eam1104I	CTCTTC	2 cut(s)	400, 1301
EarI	CTCTTC	2 cut(s)	400, 1301
EciI	GGCGGA	2 cut(s)	189, 260
Ecl136II	GAGCTC	1 cut(s)	678
EclXI	CGGCCG	1 cut(s)	166
Eco130I	CCWWGG	4 cut(s)	48, 106, 846, 909
Eco147I	AGGCCT	1 cut(s)	1799
Eco24I	GRGCYC	3 cut(s)	95, 680, 744
Eco32I	GATATC	1 cut(s)	1882
Eco47I	GGWCC	2 cut(s)	58, 1197
Eco52I	CGGCCG	1 cut(s)	166
Eco53kI	GAGCTC	1 cut(s)	678
Eco57I	CTGAAG	2 cut(s)	1809, 1938
Eco81I	CCTNAGG	1 cut(s)	1066
EcoICRI	GAGCTC	1 cut(s)	678
EcoO109I	RGGNCCY	1 cut(s)	1197
EcoRI	GAATTC	1 cut(s)	924
EcoRII	CCWGG	1 cut(s)	2078
EcoRV	GATATC	1 cut(s)	1882
EcoT14I	CCWWGG	4 cut(s)	48, 106, 846, 909
EcoT38I	GRGCYC	3 cut(s)	95, 680, 744
ErhI	CCWWGG	4 cut(s)	48, 106, 846, 909
Esp3I	CGTCTC	1 cut(s)	653
FaeI	CATG	9 cut(s)	52, 110, 340, 596, 1328, 1481, 1591, 1610, 2074
FaqI	GGGAC	6 cut(s)	227, 541, 1183, 1840, 2026, 2061
FatI	CATG	9 cut(s)	48, 106, 336, 592, 1324, 1477, 1587, 1606, 2070
FauI	CCCGC	4 cut(s)	17, 223, 476, 2103
FbaI	TGATCA	2 cut(s)	331, 1474
FblI	GTMKAC	1 cut(s)	1729
FokI	GGATG	6 cut(s)	250, 440, 584, 656, 1658, 1754
FriOI	GRGCYC	3 cut(s)	95, 680, 744
FspBI	CTAG	4 cut(s)	921, 945, 1844, 1875
GlaI	GCGC	3 cut(s)	261, 363, 1674
GsaI	CCCAGC	1 cut(s)	1931
GsuI	CTGGAG	1 cut(s)	1674
HaeII	RGCGCY	2 cut(s)	365, 1676
HaeIII	GGCC	9 cut(s)	105, 168, 234, 505, 845, 1258, 1799, 1893, 2089
HgaI	GACGC	2 cut(s)	236, 1740
HhaI	GCGC	3 cut(s)	262, 364, 1675
Hin1I	GRCGYC	3 cut(s)	216, 356, 1732
Hin1II	CATG	9 cut(s)	52, 110, 340, 596, 1328, 1481, 1591, 1610, 2074
Hin6I	GCGC	3 cut(s)	260, 362, 1673
HinP1I	GCGC	3 cut(s)	260, 362, 1673
HphI	GGTGA	5 cut(s)	134, 341, 763, 803, 1313
Hpy166II	GTNNAC	1 cut(s)	1730
Hpy8I	GTNNAC	1 cut(s)	1730
Hpy99I	CGWCG	2 cut(s)	361, 997
HpyAV	CCTTC	6 cut(s)	405, 658, 763, 949, 1810, 2077
HpyCH4III	ACNGT	3 cut(s)	62, 1049, 1781
HpyCH4IV	ACGT	4 cut(s)	216, 356, 530, 992
HpyF3I	CTNAG	5 cut(s)	561, 801, 1066, 1268, 1452
HpySE526I	ACGT	4 cut(s)	216, 356, 530, 992
Hsp92I	GRCGYC	3 cut(s)	216, 356, 1732
Hsp92II	CATG	9 cut(s)	52, 110, 340, 596, 1328, 1481, 1591, 1610, 2074
HspAI	GCGC	3 cut(s)	260, 362, 1673
KpnI	GGTACC	2 cut(s)	37, 1074
KroI	GCCGGC	1 cut(s)	274
KroNI	GCCGGC	1 cut(s)	276
Ksp22I	TGATCA	2 cut(s)	331, 1474
KspI	CCGCGG	1 cut(s)	103
Kzo9I	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
LmnI	GCTCC	5 cut(s)	134, 202, 598, 739, 2083
Lsp1109I	GCAGC	5 cut(s)	255, 258, 322, 1567, 1682
LweI	GCATC	2 cut(s)	634, 1591
MaeI	CTAG	4 cut(s)	921, 945, 1844, 1875
MaeII	ACGT	4 cut(s)	216, 356, 530, 992
MaeIII	GTNAC	1 cut(s)	1700
MalI	GATC	8 cut(s)	80, 333, 963, 1024, 1104, 1476, 1916, 1968
MbiI	CCGCTC	1 cut(s)	2086
MboI	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
MflI	RGATCY	2 cut(s)	78, 1966
MhlI	GDGCHC	4 cut(s)	95, 603, 680, 744
MlsI	TGGCCA	1 cut(s)	1893
MluNI	TGGCCA	1 cut(s)	1893
MlyI	GAGTC	5 cut(s)	1133, 1385, 1621, 2008, 2083
MmeI	TCCRAC	5 cut(s)	56, 156, 474, 706, 1881
Mox20I	TGGCCA	1 cut(s)	1893
MroNI	GCCGGC	1 cut(s)	274
MroXI	GAANNNNTTC	5 cut(s)	179, 382, 1248, 1362, 1498
MscI	TGGCCA	1 cut(s)	1893
MseI	TTAA	6 cut(s)	840, 1037, 1224, 1290, 1581, 2063
MslI	CAYNNNNRTG	1 cut(s)	53
Msp20I	TGGCCA	1 cut(s)	1893
MspA1I	CMGCKG	1 cut(s)	102
MspR9I	CCNGG	5 cut(s)	24, 476, 502, 1017, 2080
Mva1269I	GAATGC	2 cut(s)	631, 880
MvaI	CCWGG	1 cut(s)	2080
MvnI	CGCG	4 cut(s)	102, 159, 205, 230
NaeI	GCCGGC	1 cut(s)	276
NciI	CCSGG	4 cut(s)	24, 476, 502, 1017
NcoI	CCATGG	2 cut(s)	48, 106
NdeII	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
NgoMIV	GCCGGC	1 cut(s)	274
NlaIII	CATG	9 cut(s)	52, 110, 340, 596, 1328, 1481, 1591, 1610, 2074
NlaIV	GGNNCC	6 cut(s)	35, 473, 741, 915, 1072, 1199
NmeAIII	GCCGAG	2 cut(s)	711, 911
PagI	TCATGA	2 cut(s)	1477, 2070
PaqCI	CACCTGC	1 cut(s)	1324
PasI	CCCWGGG	1 cut(s)	2079
PceI	AGGCCT	1 cut(s)	1799
PctI	GAATGC	2 cut(s)	631, 880
PdiI	GCCGGC	1 cut(s)	276
PdmI	GAANNNNTTC	5 cut(s)	179, 382, 1248, 1362, 1498
PfeI	GAWTC	5 cut(s)	575, 653, 1249, 1499, 2030
PfoI	TCCNGGA	1 cut(s)	22
PinAI	ACCGGT	1 cut(s)	36
PleI	GAGTC	5 cut(s)	1132, 1384, 1620, 2008, 2082
PpsI	GAGTC	5 cut(s)	1132, 1384, 1620, 2008, 2082
PpuMI	RGGWCCY	1 cut(s)	1197
PshAI	GACNNNNGTC	1 cut(s)	1005
Psp124BI	GAGCTC	1 cut(s)	680
Psp5II	RGGWCCY	1 cut(s)	1197
Psp6I	CCWGG	1 cut(s)	2078
PspFI	CCCAGC	1 cut(s)	1927
PspGI	CCWGG	1 cut(s)	2078
PspN4I	GGNNCC	6 cut(s)	35, 473, 741, 915, 1072, 1199
PspPI	GGNCC	5 cut(s)	58, 232, 504, 1197, 1256
PspPPI	RGGWCCY	1 cut(s)	1197
PstNI	CAGNNNCTG	2 cut(s)	268, 1829
PsuI	RGATCY	2 cut(s)	78, 1966
RsaI	GTAC	4 cut(s)	35, 401, 1072, 1959
RsaNI	GTAC	4 cut(s)	34, 400, 1071, 1958
RseI	CAYNNNNRTG	1 cut(s)	53
SacI	GAGCTC	1 cut(s)	680
SacII	CCGCGG	1 cut(s)	103
SaqAI	TTAA	6 cut(s)	840, 1037, 1224, 1290, 1581, 2063
Sau3AI	GATC	8 cut(s)	78, 331, 961, 1022, 1102, 1474, 1914, 1966
Sau96I	GGNCC	5 cut(s)	58, 232, 504, 1197, 1256
SchI	GAGTC	5 cut(s)	1133, 1385, 1621, 2008, 2083
ScrFI	CCNGG	5 cut(s)	24, 476, 502, 1017, 2080
SduI	GDGCHC	4 cut(s)	95, 603, 680, 744
SfaNI	GCATC	2 cut(s)	634, 1591
Sfr303I	CCGCGG	1 cut(s)	103
SgrBI	CCGCGG	1 cut(s)	103
SinI	GGWCC	2 cut(s)	58, 1197
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	1029
SmoI	CTYRAG	1 cut(s)	1029
SseBI	AGGCCT	1 cut(s)	1799
SspMI	CTAG	4 cut(s)	921, 945, 1844, 1875
SstI	GAGCTC	1 cut(s)	680
StuI	AGGCCT	1 cut(s)	1799
StyD4I	CCNGG	5 cut(s)	22, 474, 500, 1015, 2078
StyI	CCWWGG	4 cut(s)	48, 106, 846, 909
TaaI	ACNGT	3 cut(s)	62, 1049, 1781
TaiI	ACGT	4 cut(s)	219, 359, 533, 995
TaqI	TCGA	5 cut(s)	173, 680, 1041, 1536, 1575
TauI	GCSGC	8 cut(s)	105, 162, 190, 193, 205, 245, 483, 2089
TfiI	GAWTC	5 cut(s)	575, 653, 1249, 1499, 2030
Tru1I	TTAA	6 cut(s)	840, 1037, 1224, 1290, 1581, 2063
Tru9I	TTAA	6 cut(s)	840, 1037, 1224, 1290, 1581, 2063
TscAI	CASTG	2 cut(s)	654, 886
TseI	GCWGC	5 cut(s)	268, 271, 310, 1555, 1670
TspDTI	ATGAA	6 cut(s)	782, 810, 1251, 1533, 1560, 2059
TspGWI	ACGGA	1 cut(s)	1658
TspRI	CASTG	2 cut(s)	654, 886
VpaK11BI	GGWCC	2 cut(s)	58, 1197
XapI	RAATTY	6 cut(s)	902, 924, 1144, 1395, 1527, 1832
XbaI	TCTAGA	1 cut(s)	1843
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1901
XmiI	GTMKAC	1 cut(s)	1729
XmnI	GAANNNNTTC	5 cut(s)	179, 382, 1248, 1362, 1498
XspI	CTAG	4 cut(s)	921, 945, 1844, 1875
ZraI	GACGTC	2 cut(s)	217, 357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.