No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G32930 AT3G32930 |
| fragaria_vesca | FvH4_3g44830 |
| malus_domestica | MD08G1205200.v1.1 |
| prunus_persica | Prupe.1G537200_v2.0.a1 |
| pyrus_communis | pycom08g17740 |
| rosa_chinensis | RchiOBHm_Chr5g0081531 |
| rosa_laevigata | RLG00000036945 |
| rosa_multiflora | Rmu_co8505191.1_g000002 Rmu_sc0004657.1_g000055 Rmu_sc0007702.1_g000001 Rmu_sc0037529.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00002020 |
| rosa_rugosa | Rorug05G0411800 Rorug05G0477000 Rorug05G0477100 |
| rosa_samantha | Rh5AG528400 Rh5BG553200 Rh5CG576000 Rh5DG563300 Rh7AG444400 |
| rosa_wichuraiana | Rw5G049160 Rw7G036920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 493 |
| AccB1I | GGYRCC | 1 cut(s) | 493 |
| AciI | CCGC | 2 cut(s) | 514, 671 |
| AclWI | GGATC | 1 cut(s) | 304 |
| AcuI | CTGAAG | 1 cut(s) | 528 |
| AfaI | GTAC | 2 cut(s) | 472, 495 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 682 |
| AgsI | TTSAA | 5 cut(s) | 20, 70, 230, 280, 391 |
| AluBI | AGCT | 4 cut(s) | 293, 305, 425, 661 |
| AluI | AGCT | 4 cut(s) | 293, 305, 425, 661 |
| Alw21I | GWGCWC | 2 cut(s) | 663, 759 |
| Alw26I | GTCTC | 3 cut(s) | 322, 353, 599 |
| AlwI | GGATC | 1 cut(s) | 304 |
| ApeKI | GCWGC | 1 cut(s) | 422 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 352, 384 |
| Asp718I | GGTACC | 1 cut(s) | 493 |
| AspS9I | GGNCC | 1 cut(s) | 767 |
| AsuHPI | GGTGA | 2 cut(s) | 30, 163 |
| AvaII | GGWCC | 1 cut(s) | 767 |
| BanI | GGYRCC | 1 cut(s) | 493 |
| BanII | GRGCYC | 2 cut(s) | 649, 663 |
| Bbv12I | GWGCWC | 2 cut(s) | 663, 759 |
| BbvI | GCAGC | 1 cut(s) | 434 |
| BccI | CCATC | 2 cut(s) | 218, 505 |
| BcoDI | GTCTC | 3 cut(s) | 322, 353, 599 |
| BfaI | CTAG | 1 cut(s) | 677 |
| BglII | AGATCT | 1 cut(s) | 761 |
| BisI | GCNGC | 2 cut(s) | 423, 515 |
| BlsI | GCNGC | 2 cut(s) | 424, 516 |
| Bme18I | GGWCC | 1 cut(s) | 767 |
| BmgT120I | GGNCC | 1 cut(s) | 767 |
| BmiI | GGNNCC | 1 cut(s) | 495 |
| BmsI | GCATC | 3 cut(s) | 270, 463, 559 |
| BpuEI | CTTGAG | 1 cut(s) | 285 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 609, 639 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 682 |
| Bse1I | ACTGG | 2 cut(s) | 236, 410 |
| Bse3DI | GCAATG | 1 cut(s) | 531 |
| BseGI | GGATG | 3 cut(s) | 32, 454, 556 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 682 |
| BseMI | GCAATG | 1 cut(s) | 531 |
| BseMII | CTCAG | 3 cut(s) | 333, 490, 772 |
| BseNI | ACTGG | 2 cut(s) | 236, 410 |
| BseRI | GAGGAG | 2 cut(s) | 46, 565 |
| BseXI | GCAGC | 1 cut(s) | 434 |
| BsgI | GTGCAG | 1 cut(s) | 594 |
| BshNI | GGYRCC | 1 cut(s) | 493 |
| BsiHKAI | GWGCWC | 2 cut(s) | 663, 759 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 682 |
| BsmAI | GTCTC | 3 cut(s) | 322, 353, 599 |
| Bsp1286I | GDGCHC | 3 cut(s) | 649, 663, 759 |
| Bsp143I | GATC | 3 cut(s) | 200, 296, 761 |
| BspACI | CCGC | 2 cut(s) | 514, 671 |
| BspCNI | CTCAG | 3 cut(s) | 332, 489, 771 |
| BspLI | GGNNCC | 1 cut(s) | 495 |
| BspPI | GGATC | 1 cut(s) | 304 |
| BspT107I | GGYRCC | 1 cut(s) | 493 |
| BsrDI | GCAATG | 1 cut(s) | 531 |
| BsrI | ACTGG | 2 cut(s) | 236, 410 |
| BssMI | GATC | 3 cut(s) | 200, 296, 761 |
| BstDEI | CTNAG | 5 cut(s) | 77, 319, 381, 476, 758 |
| BstF5I | GGATG | 3 cut(s) | 32, 454, 556 |
| BstKTI | GATC | 3 cut(s) | 203, 299, 764 |
| BstMAI | GTCTC | 3 cut(s) | 322, 353, 599 |
| BstMBI | GATC | 3 cut(s) | 200, 296, 761 |
| BstV1I | GCAGC | 1 cut(s) | 434 |
| BstX2I | RGATCY | 2 cut(s) | 296, 761 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 243 |
| BstYI | RGATCY | 2 cut(s) | 296, 761 |
| BtsCI | GGATG | 3 cut(s) | 32, 454, 556 |
| BtsIMutI | CAGTG | 1 cut(s) | 417 |
| Cfr13I | GGNCC | 1 cut(s) | 767 |
| CseI | GACGC | 2 cut(s) | 428, 525 |
| Csp6I | GTAC | 2 cut(s) | 471, 494 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 569, 604 |
| CviAII | CATG | 1 cut(s) | 614 |
| CviQI | GTAC | 2 cut(s) | 471, 494 |
| DdeI | CTNAG | 5 cut(s) | 77, 319, 381, 476, 758 |
| DpnI | GATC | 3 cut(s) | 202, 298, 763 |
| DpnII | GATC | 3 cut(s) | 200, 296, 761 |
| Ecl136II | GAGCTC | 1 cut(s) | 661 |
| Eco24I | GRGCYC | 2 cut(s) | 649, 663 |
| Eco47I | GGWCC | 1 cut(s) | 767 |
| Eco53kI | GAGCTC | 1 cut(s) | 661 |
| Eco57I | CTGAAG | 1 cut(s) | 528 |
| EcoICRI | GAGCTC | 1 cut(s) | 661 |
| EcoT38I | GRGCYC | 2 cut(s) | 649, 663 |
| FaeI | CATG | 1 cut(s) | 617 |
| FaiI | YATR | 5 cut(s) | 244, 270, 398, 566, 615 |
| FatI | CATG | 1 cut(s) | 613 |
| FauI | CCCGC | 1 cut(s) | 678 |
| Fnu4HI | GCNGC | 2 cut(s) | 423, 515 |
| FokI | GGATG | 3 cut(s) | 19, 441, 563 |
| FriOI | GRGCYC | 2 cut(s) | 649, 663 |
| Fsp4HI | GCNGC | 2 cut(s) | 423, 515 |
| FspBI | CTAG | 1 cut(s) | 677 |
| GluI | GCNGC | 2 cut(s) | 423, 515 |
| HgaI | GACGC | 2 cut(s) | 428, 525 |
| Hin1II | CATG | 1 cut(s) | 617 |
| HinfI | GANTC | 1 cut(s) | 73 |
| HphI | GGTGA | 2 cut(s) | 30, 163 |
| Hpy166II | GTNNAC | 2 cut(s) | 194, 473 |
| Hpy188I | TCNGA | 7 cut(s) | 225, 322, 479, 508, 550, 594, 761 |
| Hpy188III | TCNNGA | 2 cut(s) | 70, 277 |
| Hpy8I | GTNNAC | 2 cut(s) | 194, 473 |
| HpyAV | CCTTC | 8 cut(s) | 76, 332, 426, 474, 503, 594, 745, 780 |
| HpyCH4V | TGCA | 3 cut(s) | 261, 611, 633 |
| HpyF3I | CTNAG | 5 cut(s) | 77, 319, 381, 476, 758 |
| Hsp92II | CATG | 1 cut(s) | 617 |
| KpnI | GGTACC | 1 cut(s) | 497 |
| Kzo9I | GATC | 3 cut(s) | 200, 296, 761 |
| LmnI | GCTCC | 1 cut(s) | 666 |
| Lsp1109I | GCAGC | 1 cut(s) | 434 |
| LweI | GCATC | 3 cut(s) | 270, 463, 559 |
| MaeI | CTAG | 1 cut(s) | 677 |
| MalI | GATC | 3 cut(s) | 202, 298, 763 |
| MboI | GATC | 3 cut(s) | 200, 296, 761 |
| MboII | GAAGA | 2 cut(s) | 256, 292 |
| MflI | RGATCY | 2 cut(s) | 296, 761 |
| MhlI | GDGCHC | 3 cut(s) | 649, 663, 759 |
| MluCI | AATT | 3 cut(s) | 437, 484, 743 |
| MlyI | GAGTC | 1 cut(s) | 67 |
| MmeI | TCCRAC | 2 cut(s) | 157, 528 |
| MnlI | CCTC | 9 cut(s) | 46, 64, 67, 110, 161, 173, 583, 586, 636 |
| MseI | TTAA | 1 cut(s) | 525 |
| MspA1I | CMGCKG | 1 cut(s) | 425 |
| NdeII | GATC | 3 cut(s) | 200, 296, 761 |
| NlaIII | CATG | 1 cut(s) | 617 |
| NlaIV | GGNNCC | 1 cut(s) | 495 |
| NmeAIII | GCCGAG | 1 cut(s) | 763 |
| PkrI | GCNGC | 2 cut(s) | 424, 516 |
| PleI | GAGTC | 1 cut(s) | 67 |
| PpsI | GAGTC | 1 cut(s) | 67 |
| Psp124BI | GAGCTC | 1 cut(s) | 663 |
| PspN4I | GGNNCC | 1 cut(s) | 495 |
| PspPI | GGNCC | 1 cut(s) | 767 |
| PsuI | RGATCY | 2 cut(s) | 296, 761 |
| PvuII | CAGCTG | 1 cut(s) | 425 |
| RsaI | GTAC | 2 cut(s) | 472, 495 |
| RsaNI | GTAC | 2 cut(s) | 471, 494 |
| SacI | GAGCTC | 1 cut(s) | 663 |
| SaqAI | TTAA | 1 cut(s) | 525 |
| SatI | GCNGC | 2 cut(s) | 423, 515 |
| Sau3AI | GATC | 3 cut(s) | 200, 296, 761 |
| Sau96I | GGNCC | 1 cut(s) | 767 |
| SchI | GAGTC | 1 cut(s) | 67 |
| SduI | GDGCHC | 3 cut(s) | 649, 663, 759 |
| SfaNI | GCATC | 3 cut(s) | 270, 463, 559 |
| SinI | GGWCC | 1 cut(s) | 767 |
| SmlI | CTYRAG | 1 cut(s) | 300 |
| SmoI | CTYRAG | 1 cut(s) | 300 |
| Sse9I | AATT | 3 cut(s) | 437, 484, 743 |
| SsiI | CCGC | 2 cut(s) | 514, 671 |
| SspMI | CTAG | 1 cut(s) | 677 |
| SstI | GAGCTC | 1 cut(s) | 663 |
| TasI | AATT | 3 cut(s) | 437, 484, 743 |
| TauI | GCSGC | 1 cut(s) | 517 |
| Tru1I | TTAA | 1 cut(s) | 525 |
| Tru9I | TTAA | 1 cut(s) | 525 |
| TscAI | CASTG | 1 cut(s) | 417 |
| TseI | GCWGC | 1 cut(s) | 422 |
| TspRI | CASTG | 1 cut(s) | 417 |
| VpaK11BI | GGWCC | 1 cut(s) | 767 |
| XspI | CTAG | 1 cut(s) | 677 |