Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0002898

Physical Location & Seq

Genomic Coordinates Reverse (-)

5383737 .. 5393642

Gene Structure 9906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g05990.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGTGGAAGCTGAAGATAGCGGAGGGAGGGAGTCCATGGCTGCGGACGCTGAACAACCACGTCGGCCGCCAAGTCTGGGAGTTCGATCCCACGCTCGGAACTCCGGAGGAGCTCGAGGAGGTCGAGAAGGCTCGCGAGCACTACCGTAACCACCGCTTCGTTCACAAGCACAGCTCCGATCGCCTCATGCGCATTCAGTTTGCCAAGGAAAACCCAGTTAAGGATGTTTTACCCCAGATCAAAGTAAAGGACACAGAAGATCTGACCGACGAGACAGTTACTACTATTTTAAAAAGGGCTATAAATTTCCATTCCACACTTCAAGCGCACGATGGACATTGGCCTGGGGATTATGGAGGTCCTATGTTTCTGCTGCCTGGCCTGGTTATTACTTTGTCCATCACTGGGGCACTGAATGCAGTCTTATCAGATGAGCATAGGAAGGAGATCTGTCGATACCTTTACAATCATCAGAATGAAGATGGTGGGTGGGGTTTACACATAGAGGGCCCCAGTACCATGTTTGGTAGTGTCTTGACTTATGTTACCTTAAGGTTGCTTGGCGAAGGGGCTAAAGATGGAAAAGGAGCGATGGAGAACGGGCGTAAATGGATTTTGGACCATGGGAGTGCCACAGCAATTACATCATGGGGGAAAATGTGGCTATCAGTACTTGGAGCATTTGAATGGTCTGGCAATAATCCCCTGCCCCCTGAGATATGGCTTCTCCCTTACATACTCCCTATCCATCCAGGAAGGATGTGGTGTCATTGCCGCATGGTCTATTTGCCAATGTCTTACTTGTATGGAAAGCGGTTTGTTGGTCCAATCACACCAACAGTTTTGTCTTTGAGGAAAGAGCTTTTTAATGTCCCCTATCATGAAATAGATTGGAACCAGGCGCGGAACGAGTGTGCAAAGGAGGATTTGTACTATCCACATCCCCTTGTACAAGACATACTTTGGACCTCTCTTCATAAGGCTGTTGAACCAGTCTTGATGCATTGGCCTGGAAAGAAGTTGAGAGAAAAGGCTCTGAAAACCGCAATTGAGCACATACACTACGAAGATGAGAATACTCGTTACATTTGCATTGGGCCTGTGAATAAGGTGTTAAATATGCTATGTTGTTGGGTGGAAGATCCGAATTCAGAGGCTTTCAAGTTGCATATTCCAAGAATCTATGATTATCTCTGGATTGCTGAAGATGGCATGAAAATGCAGGGGTATAATGGAAGCCAGTTATGGGACACTGCTTTCGCAGTTCAAGCAATCGTATCAACCAACCTTGTTGAAGAGTATAGTTCAACTCTAAGAAAGGGACATAAATTCATAAAAGATTCACAGGTTTTAGAAAATTGCCCAGGTGATCTCGACGATTGGTATCGCCACATTTCAAAGGGAGCTTGGCCTTTCTCTACTGGCGATCACGGATGGCCTATCTCAGACTGCACAGCAGAAGGGCTGAAAGCTGTTCTAGTCCTGTCAAAAATTCCATCAGAAATTGTCGGTGAACCCCTAGATGCGAATCGGTTGTATGACGCTGTCAATGTCATACTCTCATTACAGAATGGGGATGGTGGCTTTGCGACATACGAACTCACAAGATCCTACAGATGGTTGGAGTTGATCAATCCTGCTGAGACATTTGGTGACATTGTTATTGATTATCCATATGTTGAATGTACCTCAGCTGCTATTCAAGCTCTGGCATCATTTAAAAAATTATATCCTGGTCATCGGCCACGAGAAATAGAACAGTGCATCAAGAAGGGAGTTGAGTTTATAGAGAAGATACAAGAGTCTGATGGCTCATGGTATGGTTCTTGGGGTGTTTGCTTCACTTATGGTACATGGTTTGGGGTAAAAGGGTTGGTCGCAGCTGGAATGAACTACAACAATAGCTCTAGCATTCGTAAAGCTTGTGATTTTCTGCTATCCAAACAGCTTGATTCGGGTGGCTGGGCAGAGAGTTATCTTTCATGCCAAAACAAGGAGTACACAAATCTTAAGGGGAATAGGTCTCATGTGGTAAACACTGGATGGGCTATGTTAGCTCTTATTGATGCCGGGCAGGCTGAAAGAGATCCAACACCATTGCACCGTGGGGCTAGATGTTTGATAAATTCTCAAATGGAGAATGGAGATTTTCCTCAGGAGGAAATCATGGGTGTCTTCAACCGGAACTGTATGATCGCCTATTCTGCATACAGAAACATATTCCCCATATGGGCATTGGGAGAATACCGCTGCAGGGTGTTGGGATCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009555 GO:0009657 GO:0009668 GO:0009987 GO:0010027 GO:0010685 GO:0010686 GO:0016043 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0016871 GO:0019742 GO:0019745 GO:0031559 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048856 GO:0061024 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 map00100 map00909 map01100 map01110

Pfam Domains

Protein Families

Prenyltrans SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

758

Amino Acids

86.12

Weight (kDa)

6.1

Isoelectric Point (pI)

39.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SQHop_cyclase_N	PF13249	22 - 257	2.3e-36	Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C	PF13243	292 - 629	3.4e-55	Squalene-hopene cyclase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07050 AT2G07050
fragaria_vesca	FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_6g36510 FvH4_6g36510
malus_domestica	MD00G1130000.v1.1 MD00G1220900.v1.1 MD13G1232100.v1.1 MD16G1237000.v1.1 MD17G1159900.v1.1 MD17G1245900.v1.1 MD17G1246400.v1.1
prunus_persica	Prupe.1G063400_v2.0.a1 Prupe.3G026100_v2.0.a1 Prupe.3G026100_v2.0.a1
pyrus_communis	pycom09g08550
rosa_chinensis	RchiOBHm_Chr2g0148711 RchiOBHm_Chr2g0148821 RchiOBHm_Chr2g0148951 RchiOBHm_Chr4g0397221
rosa_laevigata	RLG00000009438 RLG00000020359
rosa_multiflora	Rmu_sc0001796.1_g000004 Rmu_sc0002312.1_g000065 Rmu_sc0008532.1_g000008 Rmu_sc0017689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098550 Rroxscaffold_5G00342160
rosa_rugosa	Rorug03G0225900 Rorug03G0343900 Rorug03G0343900
rosa_samantha	Rh2AG467200 Rh2DG488900
rosa_wichuraiana	Rw2G038090 Rw4G006310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	191
AccII	CGCG	2 cut(s)	135, 904
AccIII	TCCGGA	1 cut(s)	103
AciI	CCGC	9 cut(s)	20, 43, 67, 154, 775, 814, 904, 1044, 2248
AclWI	GGATC	5 cut(s)	80, 1136, 1602, 2081, 2272
AcoI	YGGCCR	2 cut(s)	64, 1742
AcsI	RAATTY	5 cut(s)	304, 1147, 1328, 1491, 2125
AcuI	CTGAAG	2 cut(s)	32, 1224
AfaI	GTAC	7 cut(s)	517, 672, 932, 951, 1687, 1852, 2000
AfiI	CCNNNNNNNGG	9 cut(s)	76, 95, 220, 405, 1246, 1617, 1993, 2230, 2254
AflII	CTTAAG	2 cut(s)	550, 2009
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
Alw21I	GWGCWC	3 cut(s)	114, 141, 1056
Alw26I	GTCTC	3 cut(s)	266, 1637, 2028
AlwI	GGATC	5 cut(s)	80, 1136, 1602, 2081, 2272
Ama87I	CYCGRG	1 cut(s)	113
Aor13HI	TCCGGA	1 cut(s)	103
AoxI	GGCC	9 cut(s)	64, 341, 379, 508, 1007, 1097, 1409, 1436, 1742
ApaI	GGGCCC	1 cut(s)	512
ApeKI	GCWGC	5 cut(s)	40, 373, 1694, 1880, 2250
ApoI	RAATTY	5 cut(s)	304, 1147, 1328, 1491, 2125
ArsI	GACNNNNNNTTYG	2 cut(s)	1241, 1273
AspLEI	GCGC	3 cut(s)	192, 328, 904
AspS9I	GGNCC	7 cut(s)	359, 508, 509, 619, 824, 966, 1097
AsuC2I	CCSGG	1 cut(s)	2071
AsuHPI	GGTGA	3 cut(s)	1379, 1523, 1664
AvaI	CYCGRG	1 cut(s)	113
AvaII	GGWCC	4 cut(s)	359, 619, 824, 966
AxyI	CCTNAGG	1 cut(s)	2154
BaeGI	GKGCMC	2 cut(s)	412, 512
BaeI	ACNNNNGTAYC	2 cut(s)	1787, 1820
BanII	GRGCYC	2 cut(s)	114, 512
BauI	CACGAG	1 cut(s)	1746
BbsI	GAAGAC	1 cut(s)	2167
Bbv12I	GWGCWC	3 cut(s)	114, 141, 1056
BbvCI	CCTCAGC	1 cut(s)	1690
BbvI	GCAGC	5 cut(s)	27, 360, 1681, 1892, 2237
BciT130I	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
BclI	TGATCA	1 cut(s)	1629
BcnI	CCSGG	1 cut(s)	2071
BcoDI	GTCTC	3 cut(s)	266, 1637, 2028
BfaI	CTAG	4 cut(s)	1478, 1520, 1908, 2112
BfmI	CTRYAG	2 cut(s)	1612, 2251
BfrI	CTTAAG	2 cut(s)	550, 2009
BglI	GCCNNNNNGGC	1 cut(s)	2075
BglII	AGATCT	2 cut(s)	259, 447
BisI	GCNGC	7 cut(s)	41, 67, 374, 775, 1695, 1881, 2251
BlsI	GCNGC	7 cut(s)	42, 68, 375, 776, 1696, 1882, 2252
BmcAI	AGTACT	1 cut(s)	672
Bme1390I	CCNGG	9 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734, 2071
Bme18I	GGWCC	4 cut(s)	359, 619, 824, 966
BmeT110I	CYCGRG	1 cut(s)	113
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	7 cut(s)	359, 508, 509, 619, 824, 966, 1097
BmiI	GGNNCC	3 cut(s)	510, 511, 896
BmrFI	CCNGG	9 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734, 2071
BmrI	ACTGGG	3 cut(s)	209, 414, 507
BmsI	GCATC	5 cut(s)	990, 1513, 1721, 1773, 2056
BmuI	ACTGGG	3 cut(s)	209, 414, 507
BpiI	GAAGAC	1 cut(s)	2167
Bpu10I	CCTNAGC	1 cut(s)	1690
BpuMI	CCSGG	1 cut(s)	2071
BsaBI	GATNNNNATC	2 cut(s)	1383, 1527
BsaI	GGTCTC	1 cut(s)	2028
BsaJI	CCNNGG	6 cut(s)	35, 204, 344, 622, 1363, 2104
BsaWI	WCCGGW	2 cut(s)	103, 2181
BsaXI	ACNNNNNCTCC	2 cut(s)	914, 944
Bsc4I	CCNNNNNNNGG	9 cut(s)	76, 95, 220, 405, 1246, 1617, 1993, 2230, 2254
Bse1I	ACTGG	7 cut(s)	215, 409, 513, 992, 1240, 1426, 2044
Bse21I	CCTNAGG	1 cut(s)	2154
Bse3DI	GCAATG	2 cut(s)	769, 2096
Bse8I	GATNNNNATC	2 cut(s)	1383, 1527
BseAI	TCCGGA	1 cut(s)	103
BseBI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
BseDI	CCNNGG	6 cut(s)	35, 204, 344, 622, 1363, 2104
BseGI	GGATG	7 cut(s)	229, 748, 765, 940, 1439, 1582, 2048
BseJI	GATNNNNATC	2 cut(s)	1383, 1527
BseLI	CCNNNNNNNGG	9 cut(s)	76, 95, 220, 405, 1246, 1617, 1993, 2230, 2254
BseMI	GCAATG	2 cut(s)	769, 2096
BseMII	CTCAG	5 cut(s)	705, 1458, 1632, 1704, 2168
BseNI	ACTGG	7 cut(s)	215, 409, 513, 992, 1240, 1426, 2044
BseRI	GAGGAG	2 cut(s)	122, 131
BseSI	GKGCMC	2 cut(s)	412, 512
BseX3I	CGGCCG	1 cut(s)	64
BseXI	GCAGC	5 cut(s)	27, 360, 1681, 1892, 2237
BseYI	CCCAGC	1 cut(s)	1962
BsgI	GTGCAG	1 cut(s)	1435
Bsh1236I	CGCG	2 cut(s)	135, 904
Bsh1285I	CGRYCG	2 cut(s)	67, 181
BshFI	GGCC	9 cut(s)	66, 343, 381, 510, 1009, 1099, 1411, 1438, 1744
BsiEI	CGRYCG	2 cut(s)	67, 181
BsiHKAI	GWGCWC	3 cut(s)	114, 141, 1056
BsiHKCI	CYCGRG	1 cut(s)	113
BsiSI	CCGG	3 cut(s)	104, 2070, 2182
BslFI	GGGAC	3 cut(s)	857, 1262, 1335
BslI	CCNNNNNNNGG	9 cut(s)	76, 95, 220, 405, 1246, 1617, 1993, 2230, 2254
BsmAI	GTCTC	3 cut(s)	266, 1637, 2028
BsmFI	GGGAC	3 cut(s)	857, 1262, 1335
BsmI	GAATGC	3 cut(s)	192, 421, 1911
BsnI	GGCC	9 cut(s)	66, 343, 381, 510, 1009, 1099, 1411, 1438, 1744
Bso31I	GGTCTC	1 cut(s)	2028
BsoBI	CYCGRG	1 cut(s)	113
Bsp120I	GGGCCC	1 cut(s)	508
Bsp1286I	GDGCHC	5 cut(s)	114, 141, 412, 512, 1056
Bsp13I	TCCGGA	1 cut(s)	103
Bsp1407I	TGTACA	1 cut(s)	949
Bsp19I	CCATGG	2 cut(s)	35, 622
Bsp68I	TCGCGA	1 cut(s)	135
BspACI	CCGC	9 cut(s)	20, 43, 67, 154, 775, 814, 904, 1044, 2248
BspANI	GGCC	9 cut(s)	66, 343, 381, 510, 1009, 1099, 1411, 1438, 1744
BspCNI	CTCAG	5 cut(s)	706, 1457, 1633, 1703, 2167
BspEI	TCCGGA	1 cut(s)	103
BspFNI	CGCG	2 cut(s)	135, 904
BspHI	TCATGA	2 cut(s)	880, 2270
BspLI	GGNNCC	3 cut(s)	510, 511, 896
BspMAI	CTGCAG	1 cut(s)	2255
BspPI	GGATC	5 cut(s)	80, 1136, 1602, 2081, 2272
BspTI	CTTAAG	2 cut(s)	550, 2009
BspTNI	GGTCTC	1 cut(s)	2028
BsrDI	GCAATG	2 cut(s)	769, 2096
BsrGI	TGTACA	1 cut(s)	949
BsrI	ACTGG	7 cut(s)	215, 409, 513, 992, 1240, 1426, 2044
BssECI	CCNNGG	6 cut(s)	35, 204, 344, 622, 1363, 2104
BssSI	CACGAG	1 cut(s)	1746
BssT1I	CCWWGG	3 cut(s)	35, 204, 622
Bst2BI	CACGAG	1 cut(s)	1746
Bst2UI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
Bst4CI	ACNGT	6 cut(s)	146, 277, 841, 1761, 2105, 2189
Bst6I	CTCTTC	2 cut(s)	978, 1290
BstAFI	CTTAAG	2 cut(s)	550, 2009
BstAPI	GCANNNNNTGC	1 cut(s)	416
BstAUI	TGTACA	1 cut(s)	949
BstC8I	GCNNGC	3 cut(s)	133, 137, 2076
BstDEI	CTNAG	6 cut(s)	714, 1313, 1444, 1641, 1690, 2154
BstDSI	CCRYGG	3 cut(s)	35, 622, 2104
BstF5I	GGATG	7 cut(s)	229, 748, 765, 940, 1439, 1582, 2048
BstFNI	CGCG	2 cut(s)	135, 904
BstHHI	GCGC	3 cut(s)	192, 328, 904
BstMAI	GTCTC	3 cut(s)	266, 1637, 2028
BstMCI	CGRYCG	2 cut(s)	67, 181
BstMWI	GCNNNNNNNGC	9 cut(s)	46, 180, 189, 416, 1268, 1703, 2054, 2075, 2204
BstNI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
BstSCI	CCNGG	9 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732, 2069
BstSFI	CTRYAG	2 cut(s)	1612, 2251
BstSLI	GKGCMC	2 cut(s)	412, 512
BstUI	CGCG	2 cut(s)	135, 904
BstV1I	GCAGC	5 cut(s)	27, 360, 1681, 1892, 2237
BstV2I	GAAGAC	1 cut(s)	2167
BstX2I	RGATCY	6 cut(s)	259, 447, 1141, 1607, 2086, 2264
BstYI	RGATCY	6 cut(s)	259, 447, 1141, 1607, 2086, 2264
BstZI	CGGCCG	1 cut(s)	64
Bsu36I	CCTNAGG	1 cut(s)	2154
BsuRI	GGCC	9 cut(s)	66, 343, 381, 510, 1009, 1099, 1411, 1438, 1744
BtgI	CCRYGG	3 cut(s)	35, 622, 2104
BtgZI	GCGATG	1 cut(s)	605
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	7 cut(s)	229, 748, 765, 940, 1439, 1582, 2048
BtsI	GCAGTG	1 cut(s)	1251
BtsIMutI	CAGTG	5 cut(s)	402, 410, 1251, 1766, 2037
BtuMI	TCGCGA	1 cut(s)	135
Cac8I	GCNNGC	3 cut(s)	133, 137, 2076
CciI	TCATGA	2 cut(s)	880, 2270
CfoI	GCGC	3 cut(s)	192, 328, 904
Cfr13I	GGNCC	7 cut(s)	359, 508, 509, 619, 824, 966, 1097
CseI	GACGC	2 cut(s)	55, 1550
Csp6I	GTAC	7 cut(s)	516, 671, 931, 950, 1686, 1851, 1999
CviQI	GTAC	7 cut(s)	516, 671, 931, 950, 1686, 1851, 1999
DdeI	CTNAG	6 cut(s)	714, 1313, 1444, 1641, 1690, 2154
DraI	TTTAAA	2 cut(s)	291, 1720
EaeI	YGGCCR	2 cut(s)	64, 1742
EagI	CGGCCG	1 cut(s)	64
Eam1104I	CTCTTC	2 cut(s)	978, 1290
EarI	CTCTTC	2 cut(s)	978, 1290
Ecl136II	GAGCTC	1 cut(s)	112
EclXI	CGGCCG	1 cut(s)	64
Eco130I	CCWWGG	3 cut(s)	35, 204, 622
Eco24I	GRGCYC	2 cut(s)	114, 512
Eco31I	GGTCTC	1 cut(s)	2028
Eco47I	GGWCC	4 cut(s)	359, 619, 824, 966
Eco52I	CGGCCG	1 cut(s)	64
Eco53kI	GAGCTC	1 cut(s)	112
Eco57I	CTGAAG	2 cut(s)	32, 1224
Eco81I	CCTNAGG	1 cut(s)	2154
Eco88I	CYCGRG	1 cut(s)	113
EcoICRI	GAGCTC	1 cut(s)	112
EcoO109I	RGGNCCY	3 cut(s)	359, 508, 509
EcoRI	GAATTC	1 cut(s)	1147
EcoRII	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
EcoT14I	CCWWGG	3 cut(s)	35, 204, 622
EcoT22I	ATGCAT	1 cut(s)	1005
EcoT38I	GRGCYC	2 cut(s)	114, 512
ErhI	CCWWGG	3 cut(s)	35, 204, 622
FalI	AAGNNNNNCTT	2 cut(s)	945, 977
FaqI	GGGAC	3 cut(s)	857, 1262, 1335
FauNDI	CATATG	2 cut(s)	1675, 2228
FbaI	TGATCA	1 cut(s)	1629
Fnu4HI	GCNGC	7 cut(s)	41, 67, 374, 775, 1695, 1881, 2251
FokI	GGATG	7 cut(s)	236, 735, 772, 927, 1446, 1589, 2055
FriOI	GRGCYC	2 cut(s)	114, 512
Fsp4HI	GCNGC	7 cut(s)	41, 67, 374, 775, 1695, 1881, 2251
FspAI	RTGCGCAY	1 cut(s)	191
FspBI	CTAG	4 cut(s)	1478, 1520, 1908, 2112
FspI	TGCGCA	1 cut(s)	191
GlaI	GCGC	3 cut(s)	191, 327, 903
GluI	GCNGC	7 cut(s)	41, 67, 374, 775, 1695, 1881, 2251
GsaI	CCCAGC	1 cut(s)	1966
HaeIII	GGCC	9 cut(s)	66, 343, 381, 510, 1009, 1099, 1411, 1438, 1744
HapII	CCGG	3 cut(s)	104, 2070, 2182
HgaI	GACGC	2 cut(s)	55, 1550
HhaI	GCGC	3 cut(s)	192, 328, 904
Hin6I	GCGC	3 cut(s)	190, 326, 902
HinP1I	GCGC	3 cut(s)	190, 326, 902
HindIII	AAGCTT	1 cut(s)	1920
HinfI	GANTC	6 cut(s)	31, 1179, 1340, 1528, 1802, 1952
HpaII	CCGG	3 cut(s)	104, 2070, 2182
HphI	GGTGA	3 cut(s)	1379, 1523, 1664
Hpy166II	GTNNAC	5 cut(s)	163, 497, 1514, 2001, 2035
Hpy8I	GTNNAC	5 cut(s)	163, 497, 1514, 2001, 2035
Hpy99I	CGWCG	3 cut(s)	65, 272, 1379
HpyAV	CCTTC	6 cut(s)	121, 436, 560, 750, 1454, 1765
HpyCH4III	ACNGT	6 cut(s)	146, 277, 841, 1761, 2105, 2189
HpyCH4IV	ACGT	1 cut(s)	60
HpyF10VI	GCNNNNNNNGC	9 cut(s)	46, 180, 189, 416, 1268, 1703, 2054, 2075, 2204
HpyF3I	CTNAG	6 cut(s)	714, 1313, 1444, 1641, 1690, 2154
HpySE526I	ACGT	1 cut(s)	60
HspAI	GCGC	3 cut(s)	190, 326, 902
Kpn2I	TCCGGA	1 cut(s)	103
Ksp22I	TGATCA	1 cut(s)	1629
LmnI	GCTCC	5 cut(s)	109, 179, 587, 677, 1403
Lsp1109I	GCAGC	5 cut(s)	27, 360, 1681, 1892, 2237
LweI	GCATC	5 cut(s)	990, 1513, 1721, 1773, 2056
MaeI	CTAG	4 cut(s)	1478, 1520, 1908, 2112
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	5 cut(s)	146, 277, 544, 1082, 1652
MfeI	CAATTG	1 cut(s)	1047
MflI	RGATCY	6 cut(s)	259, 447, 1141, 1607, 2086, 2264
MhlI	GDGCHC	5 cut(s)	114, 141, 412, 512, 1056
MlyI	GAGTC	2 cut(s)	40, 1811
MmeI	TCCRAC	2 cut(s)	1602, 2114
Mph1103I	ATGCAT	1 cut(s)	1005
MroI	TCCGGA	1 cut(s)	103
MseI	TTAA	7 cut(s)	219, 290, 551, 867, 1115, 1719, 2010
MslI	CAYNNNNRTG	4 cut(s)	474, 627, 685, 1217
MspA1I	CMGCKG	3 cut(s)	1694, 1883, 2250
MspCI	CTTAAG	2 cut(s)	550, 2009
MspI	CCGG	3 cut(s)	104, 2070, 2182
MspR9I	CCNGG	9 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734, 2071
MunI	CAATTG	1 cut(s)	1047
Mva1269I	GAATGC	3 cut(s)	192, 421, 1911
MvaI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
MvnI	CGCG	2 cut(s)	135, 904
MwoI	GCNNNNNNNGC	9 cut(s)	46, 180, 189, 416, 1268, 1703, 2054, 2075, 2204
NciI	CCSGG	1 cut(s)	2071
NcoI	CCATGG	2 cut(s)	35, 622
NdeI	CATATG	2 cut(s)	1675, 2228
NlaIV	GGNNCC	3 cut(s)	510, 511, 896
NmuCI	GTSAC	1 cut(s)	1652
NruI	TCGCGA	1 cut(s)	135
NsbI	TGCGCA	1 cut(s)	191
NsiI	ATGCAT	1 cut(s)	1005
PaeR7I	CTCGAG	1 cut(s)	113
PagI	TCATGA	2 cut(s)	880, 2270
PcsI	WCGNNNNNNNCGW	1 cut(s)	120
PctI	GAATGC	3 cut(s)	192, 421, 1911
PfeI	GAWTC	4 cut(s)	1179, 1340, 1528, 1952
PflFI	GACNNNGTC	1 cut(s)	1544
PfoI	TCCNGGA	1 cut(s)	751
PkrI	GCNGC	7 cut(s)	42, 68, 375, 776, 1696, 1882, 2252
Ple19I	CGATCG	1 cut(s)	181
PleI	GAGTC	2 cut(s)	39, 1810
PpsI	GAGTC	2 cut(s)	39, 1810
PpuMI	RGGWCCY	1 cut(s)	359
Psp124BI	GAGCTC	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	359
Psp6I	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
PspFI	CCCAGC	1 cut(s)	1962
PspGI	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
PspN4I	GGNNCC	3 cut(s)	510, 511, 896
PspOMI	GGGCCC	1 cut(s)	508
PspPI	GGNCC	7 cut(s)	359, 508, 509, 619, 824, 966, 1097
PspPPI	RGGWCCY	1 cut(s)	359
PspXI	VCTCGAGB	1 cut(s)	113
PstI	CTGCAG	1 cut(s)	2255
PsuI	RGATCY	6 cut(s)	259, 447, 1141, 1607, 2086, 2264
PsyI	GACNNNGTC	1 cut(s)	1544
PvuI	CGATCG	1 cut(s)	181
PvuII	CAGCTG	2 cut(s)	1694, 1883
RruI	TCGCGA	1 cut(s)	135
RsaI	GTAC	7 cut(s)	517, 672, 932, 951, 1687, 1852, 2000
RsaNI	GTAC	7 cut(s)	516, 671, 931, 950, 1686, 1851, 1999
RseI	CAYNNNNRTG	4 cut(s)	474, 627, 685, 1217
SacI	GAGCTC	1 cut(s)	114
SaqAI	TTAA	7 cut(s)	219, 290, 551, 867, 1115, 1719, 2010
SatI	GCNGC	7 cut(s)	41, 67, 374, 775, 1695, 1881, 2251
Sau96I	GGNCC	7 cut(s)	359, 508, 509, 619, 824, 966, 1097
ScaI	AGTACT	1 cut(s)	672
SchI	GAGTC	2 cut(s)	40, 1811
ScrFI	CCNGG	9 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734, 2071
SduI	GDGCHC	5 cut(s)	114, 141, 412, 512, 1056
SfaNI	GCATC	5 cut(s)	990, 1513, 1721, 1773, 2056
SfcI	CTRYAG	2 cut(s)	1612, 2251
Sfr274I	CTCGAG	1 cut(s)	113
SinI	GGWCC	4 cut(s)	359, 619, 824, 966
SlaI	CTCGAG	1 cut(s)	113
SmiMI	CAYNNNNRTG	4 cut(s)	474, 627, 685, 1217
SmlI	CTYRAG	3 cut(s)	113, 550, 2009
SmoI	CTYRAG	3 cut(s)	113, 550, 2009
SsiI	CCGC	9 cut(s)	20, 43, 67, 154, 775, 814, 904, 1044, 2248
SspMI	CTAG	4 cut(s)	1478, 1520, 1908, 2112
SstI	GAGCTC	1 cut(s)	114
StyD4I	CCNGG	9 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732, 2069
StyI	CCWWGG	3 cut(s)	35, 204, 622
TaaI	ACNGT	6 cut(s)	146, 277, 841, 1761, 2105, 2189
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	5 cut(s)	84, 114, 123, 454, 1374
TaqII	GACCGA	1 cut(s)	281
TatI	WGTACW	4 cut(s)	670, 930, 949, 1998
TauI	GCSGC	2 cut(s)	69, 777
TfiI	GAWTC	4 cut(s)	1179, 1340, 1528, 1952
Tru1I	TTAA	7 cut(s)	219, 290, 551, 867, 1115, 1719, 2010
Tru9I	TTAA	7 cut(s)	219, 290, 551, 867, 1115, 1719, 2010
TscAI	CASTG	5 cut(s)	409, 417, 1258, 1766, 2044
TseFI	GTSAC	1 cut(s)	1652
TseI	GCWGC	5 cut(s)	40, 373, 1694, 1880, 2250
Tsp45I	GTSAC	1 cut(s)	1652
TspDTI	ATGAA	8 cut(s)	492, 897, 965, 1229, 1321, 1904, 1971, 2259
TspGWI	ACGGA	1 cut(s)	1446
TspRI	CASTG	5 cut(s)	409, 417, 1258, 1766, 2044
Tth111I	GACNNNGTC	1 cut(s)	1544
Vha464I	CTTAAG	2 cut(s)	550, 2009
VpaK11BI	GGWCC	4 cut(s)	359, 619, 824, 966
XapI	RAATTY	5 cut(s)	304, 1147, 1328, 1491, 2125
XcmI	CCANNNNNNNNNTGG	2 cut(s)	759, 2233
XhoI	CTCGAG	1 cut(s)	113
XspI	CTAG	4 cut(s)	1478, 1520, 1908, 2112
ZrmI	AGTACT	1 cut(s)	672
Zsp2I	ATGCAT	1 cut(s)	1005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.