Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002898

Physical Location & Seq

Genomic Coordinates Forward (+)

41479571 .. 41486431

Gene Structure 6861 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0343900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGCAAAACAAGTGTTTTTGGGGGTTTAGAAGCGTGGTTCGGCGGAAGCAAGTTGATTCAGTTCATGTGAAAAGACAGGGAGAGGGCCATCATGAATTGGCTAGGATATTATGTGTCACTGACCTCATTGCCATTGGAGTTGGAGCTACAATAGGTGCTGGAGTGTATGTGCTTGTGGGAACAGTTGCAAGAGAGCAGGCAGGGCCTGCGCTTACCATTTCATTCTTGATTGCTGGGATAGCTGCTGCACTCTCTGCCTTTTGCTATGCAGAGCTTGCTTGTCGCTGTCCGTCTGCTGGCAGTGCTTATCACTATTCCTACATATGTCTTGGAGAAGGTGTTGCTTGGTTCGTTGGTTGGGCTCTTGTTCTAGAATACACTATTGGTGCTTCTGCTGTTGCTCGTGGCATTACCCCAAATCTGGCCTTGTTTTTTGGAGGTCTGGATAATTTGCCTGCTGTTTTCGCCCGTCACACCATCCCTGTGATTGGTGTCGTGGTTGATCCATCTGCAGCAGTATTAGTTCTTATCGTCACTTTCCTCTTGTGTACAGGAATCAAGGAGAGTTCATTGGTACAGATGATTGTTACATCAGTAAATGTTTTTGTCTTGCTATTCATCTTGATAGTCGGTGGATATTTGGGTTTCAAAAATGGATGGGTTGGATATGAACTTCCCAGCGGGTATTTTCCCTTTGGAATAAATGGGATGTTTACTGGCTCTGCTGTGGTCTTCTTTTCATACATTGGTTTCGATTCAGTTACCAGCACAGCTGAGGAGGTGAAGAATCCTCAACGGGATCTGCCCCTCGGTATAGCAATATCATTGCTTATATGTTGCATCTTGTATATGCTTCTATCTGTTGTTATTACCGGTTTAGTACCATACTATGCCTTGGATCCAGACACTCCCATCTCCTCAGTATTTGCCGGCTATGGCGTGCAATGGGCAGTGTATATTATAACAACTGGAGCAGTTACTGCTCTCTCTGCAAGTTTGTTGGGTTCGATTCTTGCCCAGCCACGGATCCTGATGGCAATGGCCAGAGATGGATTGTTGCCTTCATTTTTTTCAGACATTAATAAAAACACCCATGTTCCTGTGAAGAGCACTGTTGCAACTGGTATCTTTGCAGCAGTTTTGGCATTCTTTATGGATGTTTCACAATTGGCTGCAATGGTTAGTGTTGGTACCCTTTTTGCATTTACTACCGCAGCAGTTTCAGTCTTGATACTTAGATATGTTCCTCCAGATGAGGTGCCCCTTTCATCATCACTTCAAGAGGCTATTAAGTCAGTATCATCACGATTAAGTTGCAATATTCAAGAAAGTGACAGCAAAAACCTTCAGAATTCTGCCGGCTCATCTGAGAATGAGAGTCACAATCTACATGAAATTGGGGAGGCATTACTCGGCTGTCCTCCGATTGAGAAAAGCATATCACAAGTAGATCTAAATGAACAAACAAGGCGAAAAATTGCTTCCTGGACCATAACCTGTCTCTGTATAGGGGTTTTTATCCTTGCATTCGCAGCTTCAGCTAAAGGTCTTTCCAGCACTCTTCGTTTCACATTGTGCGGGCTGTGTGGAATTTTCCTGCTTTGCTGCTTGATTGTGCTGTCCTGTATAGGTCAAGATTTTGCAAGGCACAGTTTTGGACACACCGGAGGCAAAAAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000250 GO:0003674 GO:0003824 GO:0016853 GO:0016866 GO:0031559

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 ko01130 map00100 map01100 map01110 map01130

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

560

Amino Acids

59.46

Weight (kDa)

6.78

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_permease_2	PF13520	41 - 419	5.1e-53	Amino acid permease
AA_permease	PF00324	42 - 412	1.8e-39	Amino acid permease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07050 AT2G07050
fragaria_vesca	FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_6g36510 FvH4_6g36510
malus_domestica	MD00G1130000.v1.1 MD00G1220900.v1.1 MD13G1232100.v1.1 MD16G1237000.v1.1 MD17G1159900.v1.1 MD17G1245900.v1.1 MD17G1246400.v1.1
prunus_persica	Prupe.1G063400_v2.0.a1 Prupe.3G026100_v2.0.a1 Prupe.3G026100_v2.0.a1
pyrus_communis	pycom09g08550
rosa_chinensis	RchiOBHm_Chr2g0148711 RchiOBHm_Chr2g0148821 RchiOBHm_Chr2g0148951 RchiOBHm_Chr4g0397221
rosa_laevigata	RLG00000009438 RLG00000020359
rosa_multiflora	Rmu_sc0001796.1_g000004 Rmu_sc0002312.1_g000065 Rmu_sc0008532.1_g000008 Rmu_sc0017689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098550 Rroxscaffold_5G00342160
rosa_rugosa	Rorug03G0225900 Rorug03G0343900 Rorug03G0343900
rosa_samantha	Rh2AG467200 Rh2DG488900
rosa_wichuraiana	Rw2G038090 Rw4G006310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	962
Acc65I	GGTACC	1 cut(s)	1190
AccB1I	GGYRCC	2 cut(s)	1190, 1258
AciI	CCGC	4 cut(s)	43, 681, 1212, 1578
AclWI	GGATC	6 cut(s)	497, 807, 893, 906, 1021, 1034
AcoI	YGGCCR	1 cut(s)	1041
AcsI	RAATTY	2 cut(s)	1351, 1590
AcuI	CTGAAG	2 cut(s)	1331, 1521
AdeI	CACNNNGTG	1 cut(s)	1575
AfaI	GTAC	4 cut(s)	550, 576, 882, 1192
AfiI	CCNNNNNNNGG	4 cut(s)	296, 421, 488, 1023
AgeI	ACCGGT	1 cut(s)	872
AgsI	TTSAA	3 cut(s)	649, 1280, 1325
AjnI	CCWGG	1 cut(s)	1484
AjuI	GAANNNNNNNTTGG	2 cut(s)	366, 398
AluBI	AGCT	6 cut(s)	146, 242, 274, 773, 1535, 1541
AluI	AGCT	6 cut(s)	146, 242, 274, 773, 1535, 1541
Alw21I	GWGCWC	1 cut(s)	1112
Alw26I	GTCTC	1 cut(s)	1505
AlwI	GGATC	6 cut(s)	497, 807, 893, 906, 1021, 1034
AlwNI	CAGNNNCTG	2 cut(s)	206, 980
AoxI	GGCC	4 cut(s)	85, 203, 423, 1041
ApeKI	GCWGC	8 cut(s)	242, 245, 512, 1133, 1172, 1214, 1532, 1605
ApoI	RAATTY	2 cut(s)	1351, 1590
AseI	ATTAAT	1 cut(s)	1080
AsiGI	ACCGGT	1 cut(s)	872
Asp718I	GGTACC	1 cut(s)	1190
AspLEI	GCGC	1 cut(s)	211
AspS9I	GGNCC	3 cut(s)	85, 203, 1488
AsuHPI	GGTGA	1 cut(s)	793
AvaII	GGWCC	1 cut(s)	1488
BaeGI	GKGCMC	1 cut(s)	1263
BalI	TGGCCA	1 cut(s)	1043
BamHI	GGATCC	2 cut(s)	898, 1026
BanI	GGYRCC	2 cut(s)	1190, 1258
BanII	GRGCYC	1 cut(s)	364
BauI	CACGAG	1 cut(s)	402
BbsI	GAAGAC	1 cut(s)	724
Bbv12I	GWGCWC	1 cut(s)	1112
BbvCI	CCTCAGC	1 cut(s)	774
BbvI	GCAGC	8 cut(s)	229, 232, 524, 1145, 1159, 1226, 1544, 1592
BccI	CCATC	7 cut(s)	96, 485, 514, 651, 920, 1027, 1043
BcgI	CGANNNNNNTGC	2 cut(s)	1296, 1330
BciT130I	CCWGG	1 cut(s)	1486
BcoDI	GTCTC	1 cut(s)	1505
BfaI	CTAG	2 cut(s)	102, 371
BfmI	CTRYAG	1 cut(s)	510
BglII	AGATCT	1 cut(s)	1450
BisI	GCNGC	8 cut(s)	243, 246, 513, 1134, 1173, 1215, 1533, 1606
BlsI	GCNGC	8 cut(s)	244, 247, 514, 1135, 1174, 1216, 1534, 1607
Bme1390I	CCNGG	1 cut(s)	1486
Bme18I	GGWCC	1 cut(s)	1488
BmgT120I	GGNCC	3 cut(s)	85, 203, 1488
BmiI	GGNNCC	4 cut(s)	900, 1028, 1192, 1260
BmrFI	CCNGG	1 cut(s)	1486
BmsI	GCATC	1 cut(s)	849
BpiI	GAAGAC	1 cut(s)	724
BpmI	CTGGAG	3 cut(s)	180, 990, 1233
Bpu10I	CCTNAGC	1 cut(s)	774
BsaJI	CCNNGG	3 cut(s)	808, 894, 1022
BsaWI	WCCGGW	2 cut(s)	872, 1664
BsaXI	ACNNNNNCTCC	4 cut(s)	153, 183, 324, 354
Bsc4I	CCNNNNNNNGG	4 cut(s)	296, 421, 488, 1023
Bse118I	RCCGGY	3 cut(s)	872, 929, 1358
Bse1I	ACTGG	3 cut(s)	721, 973, 1126
Bse3DI	GCAATG	5 cut(s)	126, 824, 950, 1044, 1182
BseBI	CCWGG	1 cut(s)	1486
BseDI	CCNNGG	3 cut(s)	808, 894, 1022
BseGI	GGATG	4 cut(s)	477, 662, 714, 1162
BseLI	CCNNNNNNNGG	4 cut(s)	296, 421, 488, 1023
BseMI	GCAATG	5 cut(s)	126, 824, 950, 1044, 1182
BseMII	CTCAG	3 cut(s)	765, 933, 1359
BseNI	ACTGG	3 cut(s)	721, 973, 1126
BseRI	GAGGAG	2 cut(s)	791, 907
BseSI	GKGCMC	1 cut(s)	1263
BseXI	GCAGC	8 cut(s)	229, 232, 524, 1145, 1159, 1226, 1544, 1592
BseYI	CCCAGC	3 cut(s)	233, 677, 1017
BsgI	GTGCAG	1 cut(s)	231
BshFI	GGCC	4 cut(s)	87, 205, 425, 1043
BshNI	GGYRCC	2 cut(s)	1190, 1258
BshTI	ACCGGT	1 cut(s)	872
BsiHKAI	GWGCWC	1 cut(s)	1112
BsiSI	CCGG	4 cut(s)	873, 930, 1359, 1665
BslI	CCNNNNNNNGG	4 cut(s)	296, 421, 488, 1023
BsmAI	GTCTC	1 cut(s)	1505
BsmI	GAATGC	2 cut(s)	1145, 1526
BsnI	GGCC	4 cut(s)	87, 205, 425, 1043
Bsp1286I	GDGCHC	3 cut(s)	364, 1112, 1263
Bsp1407I	TGTACA	1 cut(s)	548
Bsp143I	GATC	5 cut(s)	502, 799, 898, 1026, 1450
BspACI	CCGC	4 cut(s)	43, 681, 1212, 1578
BspANI	GGCC	4 cut(s)	87, 205, 425, 1043
BspCNI	CTCAG	3 cut(s)	766, 932, 1360
BspHI	TCATGA	1 cut(s)	91
BspLI	GGNNCC	4 cut(s)	900, 1028, 1192, 1260
BspMAI	CTGCAG	1 cut(s)	514
BspPI	GGATC	6 cut(s)	497, 807, 893, 906, 1021, 1034
BspQI	GCTCTTC	1 cut(s)	1100
BspT107I	GGYRCC	2 cut(s)	1190, 1258
BsrDI	GCAATG	5 cut(s)	126, 824, 950, 1044, 1182
BsrFI	RCCGGY	3 cut(s)	872, 929, 1358
BsrGI	TGTACA	1 cut(s)	548
BsrI	ACTGG	3 cut(s)	721, 973, 1126
BssAI	RCCGGY	3 cut(s)	872, 929, 1358
BssECI	CCNNGG	3 cut(s)	808, 894, 1022
BssMI	GATC	5 cut(s)	502, 799, 898, 1026, 1450
BssSI	CACGAG	1 cut(s)	402
BssT1I	CCWWGG	1 cut(s)	894
Bst2BI	CACGAG	1 cut(s)	402
Bst2UI	CCWGG	1 cut(s)	1486
Bst4CI	ACNGT	3 cut(s)	184, 1114, 1652
Bst6I	CTCTTC	2 cut(s)	1100, 1566
BstAPI	GCANNNNNTGC	4 cut(s)	206, 254, 275, 980
BstAUI	TGTACA	1 cut(s)	548
BstC8I	GCNNGC	9 cut(s)	198, 207, 276, 298, 456, 931, 941, 1360, 1580
BstDEI	CTNAG	4 cut(s)	774, 919, 1235, 1368
BstDSI	CCRYGG	1 cut(s)	1022
BstF5I	GGATG	4 cut(s)	477, 662, 714, 1162
BstHHI	GCGC	1 cut(s)	211
BstKTI	GATC	5 cut(s)	505, 802, 901, 1029, 1453
BstMAI	GTCTC	1 cut(s)	1505
BstMBI	GATC	5 cut(s)	502, 799, 898, 1026, 1450
BstNI	CCWGG	1 cut(s)	1486
BstSCI	CCNGG	1 cut(s)	1484
BstSFI	CTRYAG	1 cut(s)	510
BstSLI	GKGCMC	1 cut(s)	1263
BstV1I	GCAGC	8 cut(s)	229, 232, 524, 1145, 1159, 1226, 1544, 1592
BstV2I	GAAGAC	1 cut(s)	724
BstX2I	RGATCY	4 cut(s)	799, 898, 1026, 1450
BstYI	RGATCY	4 cut(s)	799, 898, 1026, 1450
BsuRI	GGCC	4 cut(s)	87, 205, 425, 1043
BtgI	CCRYGG	1 cut(s)	1022
BtsCI	GGATG	4 cut(s)	477, 662, 714, 1162
BtsI	GCAGTG	2 cut(s)	307, 957
BtsIMutI	CAGTG	4 cut(s)	117, 307, 957, 1110
Cac8I	GCNNGC	9 cut(s)	198, 207, 276, 298, 456, 931, 941, 1360, 1580
CaiI	CAGNNNCTG	2 cut(s)	206, 980
CciI	TCATGA	1 cut(s)	91
CfoI	GCGC	1 cut(s)	211
Cfr10I	RCCGGY	3 cut(s)	872, 929, 1358
Cfr13I	GGNCC	3 cut(s)	85, 203, 1488
Csp6I	GTAC	4 cut(s)	549, 575, 881, 1191
CspAI	ACCGGT	1 cut(s)	872
CviAII	CATG	4 cut(s)	65, 92, 1094, 1391
CviQI	GTAC	4 cut(s)	549, 575, 881, 1191
DdeI	CTNAG	4 cut(s)	774, 919, 1235, 1368
DpnI	GATC	5 cut(s)	504, 801, 900, 1028, 1452
DpnII	GATC	5 cut(s)	502, 799, 898, 1026, 1450
DraIII	CACNNNGTG	1 cut(s)	1575
EaeI	YGGCCR	1 cut(s)	1041
Eam1104I	CTCTTC	2 cut(s)	1100, 1566
EarI	CTCTTC	2 cut(s)	1100, 1566
EciI	GGCGGA	1 cut(s)	58
Eco130I	CCWWGG	1 cut(s)	894
Eco24I	GRGCYC	1 cut(s)	364
Eco47I	GGWCC	1 cut(s)	1488
Eco57I	CTGAAG	2 cut(s)	1331, 1521
EcoO109I	RGGNCCY	1 cut(s)	203
EcoRI	GAATTC	1 cut(s)	1351
EcoRII	CCWGG	1 cut(s)	1484
EcoT14I	CCWWGG	1 cut(s)	894
EcoT38I	GRGCYC	1 cut(s)	364
ErhI	CCWWGG	1 cut(s)	894
FaeI	CATG	4 cut(s)	68, 95, 1097, 1394
FatI	CATG	4 cut(s)	64, 91, 1093, 1390
FauI	CCCGC	2 cut(s)	674, 1571
FauNDI	CATATG	1 cut(s)	323
Fnu4HI	GCNGC	8 cut(s)	243, 246, 513, 1134, 1173, 1215, 1533, 1606
FokI	GGATG	4 cut(s)	464, 669, 721, 1169
FriOI	GRGCYC	1 cut(s)	364
Fsp4HI	GCNGC	8 cut(s)	243, 246, 513, 1134, 1173, 1215, 1533, 1606
FspBI	CTAG	2 cut(s)	102, 371
GlaI	GCGC	1 cut(s)	210
GluI	GCNGC	8 cut(s)	243, 246, 513, 1134, 1173, 1215, 1533, 1606
GsaI	CCCAGC	3 cut(s)	237, 681, 1021
GsuI	CTGGAG	3 cut(s)	180, 990, 1233
HaeIII	GGCC	4 cut(s)	87, 205, 425, 1043
HapII	CCGG	4 cut(s)	873, 930, 1359, 1665
HhaI	GCGC	1 cut(s)	211
Hin1II	CATG	4 cut(s)	68, 95, 1097, 1394
Hin6I	GCGC	1 cut(s)	209
HinP1I	GCGC	1 cut(s)	209
HinfI	GANTC	6 cut(s)	56, 555, 755, 787, 1009, 1378
HpaII	CCGG	4 cut(s)	873, 930, 1359, 1665
HphI	GGTGA	1 cut(s)	793
Hpy166II	GTNNAC	2 cut(s)	549, 714
Hpy188I	TCNGA	4 cut(s)	1075, 1350, 1369, 1425
Hpy8I	GTNNAC	2 cut(s)	549, 714
HpyAV	CCTTC	3 cut(s)	329, 1071, 1355
HpyCH4III	ACNGT	3 cut(s)	184, 1114, 1652
HpyF3I	CTNAG	4 cut(s)	774, 919, 1235, 1368
Hsp92II	CATG	4 cut(s)	68, 95, 1097, 1394
HspAI	GCGC	1 cut(s)	209
KpnI	GGTACC	1 cut(s)	1194
KroI	GCCGGC	2 cut(s)	929, 1358
KroNI	GCCGGC	2 cut(s)	931, 1360
Kzo9I	GATC	5 cut(s)	502, 799, 898, 1026, 1450
LguI	GCTCTTC	1 cut(s)	1100
LmnI	GCTCC	2 cut(s)	143, 971
Lsp1109I	GCAGC	8 cut(s)	229, 232, 524, 1145, 1159, 1226, 1544, 1592
LweI	GCATC	1 cut(s)	849
MaeI	CTAG	2 cut(s)	102, 371
MaeIII	GTNAC	8 cut(s)	115, 470, 532, 586, 760, 976, 1331, 1379
MalI	GATC	5 cut(s)	504, 801, 900, 1028, 1452
MboI	GATC	5 cut(s)	502, 799, 898, 1026, 1450
MboII	GAAGA	4 cut(s)	724, 796, 1117, 1553
MfeI	CAATTG	1 cut(s)	1166
MflI	RGATCY	4 cut(s)	799, 898, 1026, 1450
MhlI	GDGCHC	3 cut(s)	364, 1112, 1263
MlsI	TGGCCA	1 cut(s)	1043
MluCI	AATT	7 cut(s)	95, 448, 1166, 1351, 1395, 1476, 1590
MluNI	TGGCCA	1 cut(s)	1043
MlyI	GAGTC	1 cut(s)	1387
MmeI	TCCRAC	2 cut(s)	121, 643
Mox20I	TGGCCA	1 cut(s)	1043
MroNI	GCCGGC	2 cut(s)	929, 1358
MscI	TGGCCA	1 cut(s)	1043
MseI	TTAA	3 cut(s)	1080, 1290, 1310
MslI	CAYNNNNRTG	1 cut(s)	482
Msp20I	TGGCCA	1 cut(s)	1043
MspA1I	CMGCKG	2 cut(s)	681, 773
MspI	CCGG	4 cut(s)	873, 930, 1359, 1665
MspR9I	CCNGG	1 cut(s)	1486
MunI	CAATTG	1 cut(s)	1166
Mva1269I	GAATGC	2 cut(s)	1145, 1526
MvaI	CCWGG	1 cut(s)	1486
NaeI	GCCGGC	2 cut(s)	931, 1360
NdeI	CATATG	1 cut(s)	323
NdeII	GATC	5 cut(s)	502, 799, 898, 1026, 1450
NgoMIV	GCCGGC	2 cut(s)	929, 1358
NlaIII	CATG	4 cut(s)	68, 95, 1097, 1394
NlaIV	GGNNCC	4 cut(s)	900, 1028, 1192, 1260
NmeAIII	GCCGAG	1 cut(s)	1392
NmuCI	GTSAC	5 cut(s)	115, 470, 532, 1331, 1379
PagI	TCATGA	1 cut(s)	91
PciSI	GCTCTTC	1 cut(s)	1100
PctI	GAATGC	2 cut(s)	1145, 1526
PdiI	GCCGGC	2 cut(s)	931, 1360
PfeI	GAWTC	5 cut(s)	56, 555, 755, 787, 1009
PfoI	TCCNGGA	1 cut(s)	1484
PinAI	ACCGGT	1 cut(s)	872
PkrI	GCNGC	8 cut(s)	244, 247, 514, 1135, 1174, 1216, 1534, 1607
PleI	GAGTC	1 cut(s)	1386
PpsI	GAGTC	1 cut(s)	1386
PshBI	ATTAAT	1 cut(s)	1080
PsiI	TTATAA	1 cut(s)	962
Psp6I	CCWGG	1 cut(s)	1484
PspFI	CCCAGC	3 cut(s)	233, 677, 1017
PspGI	CCWGG	1 cut(s)	1484
PspN4I	GGNNCC	4 cut(s)	900, 1028, 1192, 1260
PspPI	GGNCC	3 cut(s)	85, 203, 1488
PstI	CTGCAG	1 cut(s)	514
PstNI	CAGNNNCTG	2 cut(s)	206, 980
PsuI	RGATCY	4 cut(s)	799, 898, 1026, 1450
PvuII	CAGCTG	1 cut(s)	773
RsaI	GTAC	4 cut(s)	550, 576, 882, 1192
RsaNI	GTAC	4 cut(s)	549, 575, 881, 1191
RseI	CAYNNNNRTG	1 cut(s)	482
SapI	GCTCTTC	1 cut(s)	1100
SaqAI	TTAA	3 cut(s)	1080, 1290, 1310
SatI	GCNGC	8 cut(s)	243, 246, 513, 1134, 1173, 1215, 1533, 1606
Sau3AI	GATC	5 cut(s)	502, 799, 898, 1026, 1450
Sau96I	GGNCC	3 cut(s)	85, 203, 1488
SchI	GAGTC	1 cut(s)	1387
ScrFI	CCNGG	1 cut(s)	1486
SduI	GDGCHC	3 cut(s)	364, 1112, 1263
SfaNI	GCATC	1 cut(s)	849
SfcI	CTRYAG	1 cut(s)	510
SinI	GGWCC	1 cut(s)	1488
SmiMI	CAYNNNNRTG	1 cut(s)	482
Sse9I	AATT	7 cut(s)	95, 448, 1166, 1351, 1395, 1476, 1590
SsiI	CCGC	4 cut(s)	43, 681, 1212, 1578
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	2 cut(s)	102, 371
StyD4I	CCNGG	1 cut(s)	1484
StyI	CCWWGG	1 cut(s)	894
TaaI	ACNGT	3 cut(s)	184, 1114, 1652
TaqI	TCGA	2 cut(s)	753, 1007
TasI	AATT	7 cut(s)	95, 448, 1166, 1351, 1395, 1476, 1590
TatI	WGTACW	1 cut(s)	548
TfiI	GAWTC	5 cut(s)	56, 555, 755, 787, 1009
Tru1I	TTAA	3 cut(s)	1080, 1290, 1310
Tru9I	TTAA	3 cut(s)	1080, 1290, 1310
TscAI	CASTG	4 cut(s)	124, 307, 957, 1117
TseFI	GTSAC	5 cut(s)	115, 470, 532, 1331, 1379
TseI	GCWGC	8 cut(s)	242, 245, 512, 1133, 1172, 1214, 1532, 1605
Tsp45I	GTSAC	5 cut(s)	115, 470, 532, 1331, 1379
TspGWI	ACGGA	2 cut(s)	279, 1039
TspRI	CASTG	4 cut(s)	124, 307, 957, 1117
VpaK11BI	GGWCC	1 cut(s)	1488
VspI	ATTAAT	1 cut(s)	1080
XapI	RAATTY	2 cut(s)	1351, 1590
XbaI	TCTAGA	1 cut(s)	370
XspI	CTAG	2 cut(s)	102, 371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.