Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002898

Physical Location & Seq

Genomic Coordinates Reverse (-)

10938103 .. 10950728

Gene Structure 12626 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00342160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2274 bp

ATGTGGAAGCTGAAGATTGCGGAGGGAGGGAATCCATGGCTGCGGACGCTCAACAACCACGTCGGCCGGCATGTCTGGGAGTTCGATCCCAAGCTCGGAACTCCGGCCGAGCTTGAGGAGGTCGAGAAGGCTCGCGAGCACTACCACAACCACCGCTTTGCTCACAAGCACAGCTCCGATCGGCTCATGCGCATTCAGTTTTCCAAGGAGAACCCTGTTCATGATGTTTTACCCCAGATCAAAGTAAAGGACACGGAAGATCTGACCGACGAGACAGTTACTAAAACTTTAAGAAGGGCTATAAATTTCCATTCCACACTTCAAGCCCATGATGGACATTGGCCTGGGGACTATGGAGGCCCTATGTTTCTACTGCCTGGCCTGGTGATTACTTTGTCCATCACTGGGGCACTGAACGCAGTGTTATCAGATGAACATAGGAAGGAGATCTGTCGATACCTTTACAATCATCAGAATGAAGATGGTGGGTGGGGTTTACACATAGAGGGCCCCAGTACCATGTTTGGTAGTGTCTTGACTTATGTTACCTTAAGGTTGCTTGGTGAAGGGGCTAAAGATGGAAAAGGAGCGATGGAGACCGGGCGTAAATGGATTTTGGACCATGGGAGTGCCACAGCAATTACATCATGGGGCAAAATGTGGTTATCAGTACTTGGAGCATTTGAATGGTCTGGCAATAATCCCCTGCCCCCTGAGATATGGCTTCTTCCTTACATGCTCCCTATCCATCCAGGAAGGATGTGGTGTCATTGCCGCATGGTCTATTTGCCAATGTCTTACTTGTATGGAAAGCGGTTTGTTGGTCCAATCACACCAACAGTTTTGTCTTTGAGAAAGGAGCTTTTTAATGTCCCCTATCATGAAATAGATTGGAACCAGGCGCGGAATGAGTGTGCAAAGGAGGATTTGTACTATCCGCATCCCCTTGTACAAGACATACTTTGGACCTCTCTTCATAAGGCTGTTGAACCGGTCTTGATGCGTTGGCCTGGAAAGAAGTTGAGAGAAAAGGCTCTGCAAACTGCGATTGAGCACATACATTATGAAGATGAGAATACTCGTTATATTTGCATTGGGCCTGTGAATAAGGTGTTAAATATGCTTTGCTGTTGGGTGGAAGATCCAAATTCAGAGGCTTTCAAGTTGCATATTCCAAGAATCTATGATTATCTATGGATTGCTGAAGATGGCATGAAAATGCAGGGCTATAATGGAAGCCAGTTATGGGACACTGCTTTCGCAGTTCAAGCAATCGTGTCAACCAACCTTATTGAAGAATATGGTTCAACTCTTAGGAAGGGACATAAATTCATAAAAGATTCACAGGTTTTAGAAAATTGCCCAGGGGATCTCGACTTTTGGTATCGCCACATTTCAAAGGGTGCTTGGCCTTTCTCTACTGCTGATCATGGATGGCCCATCTCAGACTGCACAGCAGAAGGACTGAAAGCTGTTCTAATCTTGTCAAAAATCCCATCAGAAATTGTCGGTGAACCCCTAGATGCGAATCGGTTGTATGATGCTGTCAATGTCGTACTCTCATTACAGAATGGGGATGGTGGTTTTGCGACATATGAACTCACAAGATCCTACAGATGGTTGGAGTTGATCAACCCTGCTGAGACATTTGGTGACATTGTTATCGATTATCCATATGTTGAATGTACCTCAGCTGCTATTCAAGCTTTGGCATCATTTAAAAAATTATATCCTGGTCATCGGCGACAAGAAGTAGAACAGTGCATCAAAAAGGGAGTTGAGTTTACTGAGAAGATACAAGAGTCTGATGGCTCATGGTATGGTTCTTGGGGTGTTTGCTTCACTTATGGTACATGGTTTGGGGTAAAAGGGTTGGTGGCTGCTGGAAGGAACTACGACAATAGCTCTAGCATTCGTAAAGCTTGTGATTTTCTGCTATCAAAACAGCTTGCTTCTGGTGGCTGGGGAGAGAGTTATCTTTCATGCCAAAACAAGGAGTACACAAATCTCAAGGGGGATAGGTCTCATGTGGTAAACACTGGATGGGCTATGTTAGCTCTTATTGATGCTGGGCAGGCTGAAAGAGATCCGACACCGTTGCACCGTGGGGCTAGATGTTTGATAAATTCTCAAATGGAGAATGGTGATTTTCCTCAAGAGGAAATCATGGGTGTCTTCAACCGGAACTGTATGATCACCTATTCTGCATACAGAAACATATTCCCCATATGGGCATTGGGAGAATACCGCTGTAGGGTGTTGGGATCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006629 GO:0006720 GO:0006721 GO:0006722 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009555 GO:0009657 GO:0009668 GO:0009987 GO:0010027 GO:0010685 GO:0010686 GO:0016043 GO:0016104 GO:0016114 GO:0016853 GO:0016866 GO:0016871 GO:0019742 GO:0019745 GO:0031559 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048856 GO:0061024 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 map00100 map00909 map01100 map01110

Pfam Domains

Protein Families

Prenyltrans SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

757

Amino Acids

86.2

Weight (kDa)

6.25

Isoelectric Point (pI)

40.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SQHop_cyclase_C	PF13243	88 - 167	8.1e-06	Squalene-hopene cyclase C-terminal domain
SQHop_cyclase_N	PF13249	98 - 377	9.2e-38	Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C	PF13243	413 - 750	4.8e-55	Squalene-hopene cyclase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07050 AT2G07050
fragaria_vesca	FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_6g36510 FvH4_6g36510
malus_domestica	MD00G1130000.v1.1 MD00G1220900.v1.1 MD13G1232100.v1.1 MD16G1237000.v1.1 MD17G1159900.v1.1 MD17G1245900.v1.1 MD17G1246400.v1.1
prunus_persica	Prupe.1G063400_v2.0.a1 Prupe.3G026100_v2.0.a1 Prupe.3G026100_v2.0.a1
pyrus_communis	pycom09g08550
rosa_chinensis	RchiOBHm_Chr2g0148711 RchiOBHm_Chr2g0148821 RchiOBHm_Chr2g0148951 RchiOBHm_Chr4g0397221
rosa_laevigata	RLG00000009438 RLG00000020359
rosa_multiflora	Rmu_sc0001796.1_g000004 Rmu_sc0002312.1_g000065 Rmu_sc0008532.1_g000008 Rmu_sc0017689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098550 Rroxscaffold_5G00342160
rosa_rugosa	Rorug03G0225900 Rorug03G0343900 Rorug03G0343900
rosa_samantha	Rh2AG467200 Rh2DG488900
rosa_wichuraiana	Rw2G038090 Rw4G006310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	191
AccII	CGCG	2 cut(s)	135, 904
AciI	CCGC	8 cut(s)	20, 43, 154, 775, 814, 904, 938, 2248
AclWI	GGATC	6 cut(s)	80, 1136, 1377, 1602, 2081, 2272
AcoI	YGGCCR	2 cut(s)	64, 105
AcsI	RAATTY	4 cut(s)	304, 1147, 1328, 2125
AcuI	CTGAAG	2 cut(s)	32, 1224
AfaI	GTAC	8 cut(s)	517, 672, 932, 951, 1557, 1687, 1852, 2000
AfiI	CCNNNNNNNGG	7 cut(s)	95, 405, 1246, 1617, 1993, 2230, 2254
AflII	CTTAAG	1 cut(s)	550
AgeI	ACCGGT	1 cut(s)	991
AjiI	CACGTC	1 cut(s)	61
AjnI	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
Alw21I	GWGCWC	2 cut(s)	141, 1056
Alw26I	GTCTC	4 cut(s)	266, 590, 1637, 2028
AlwI	GGATC	6 cut(s)	80, 1136, 1377, 1602, 2081, 2272
ApaI	GGGCCC	1 cut(s)	512
ApeKI	GCWGC	3 cut(s)	40, 1694, 1880
ApoI	RAATTY	4 cut(s)	304, 1147, 1328, 2125
ArsI	GACNNNNNNTTYG	2 cut(s)	1241, 1273
AsiGI	ACCGGT	1 cut(s)	991
AspLEI	GCGC	2 cut(s)	192, 904
AspS9I	GGNCC	8 cut(s)	359, 508, 509, 619, 824, 966, 1097, 1437
AsuC2I	CCSGG	1 cut(s)	601
AsuHPI	GGTGA	6 cut(s)	397, 575, 1523, 1664, 2156, 2188
AvaII	GGWCC	3 cut(s)	619, 824, 966
BaeGI	GKGCMC	2 cut(s)	412, 512
BaeI	ACNNNNGTAYC	2 cut(s)	1787, 1820
BanII	GRGCYC	1 cut(s)	512
BbsI	GAAGAC	1 cut(s)	2167
Bbv12I	GWGCWC	2 cut(s)	141, 1056
BbvCI	CCTCAGC	1 cut(s)	1690
BbvI	GCAGC	3 cut(s)	27, 1681, 1867
BcgI	CGANNNNNNTGC	2 cut(s)	2080, 2114
BciT130I	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
BclI	TGATCA	3 cut(s)	1426, 1629, 2193
BcnI	CCSGG	1 cut(s)	601
BcoDI	GTCTC	4 cut(s)	266, 590, 1637, 2028
BfaI	CTAG	3 cut(s)	1520, 1908, 2112
BfmI	CTRYAG	2 cut(s)	1612, 2251
BfrI	CTTAAG	1 cut(s)	550
BglII	AGATCT	2 cut(s)	259, 447
BisI	GCNGC	4 cut(s)	41, 775, 1695, 1881
BlsI	GCNGC	4 cut(s)	42, 776, 1696, 1882
BmcAI	AGTACT	1 cut(s)	672
Bme1390I	CCNGG	9 cut(s)	345, 378, 383, 601, 753, 899, 1011, 1365, 1734
Bme18I	GGWCC	3 cut(s)	619, 824, 966
BmgBI	CACGTC	1 cut(s)	61
BmgT120I	GGNCC	8 cut(s)	359, 508, 509, 619, 824, 966, 1097, 1437
BmiI	GGNNCC	3 cut(s)	510, 511, 896
BmrFI	CCNGG	9 cut(s)	345, 378, 383, 601, 753, 899, 1011, 1365, 1734
BmrI	ACTGGG	2 cut(s)	414, 507
BmsI	GCATC	7 cut(s)	949, 990, 1513, 1531, 1721, 1773, 2056
BmuI	ACTGGG	2 cut(s)	414, 507
BpiI	GAAGAC	1 cut(s)	2167
Bpu10I	CCTNAGC	1 cut(s)	1690
BpuEI	CTTGAG	3 cut(s)	134, 1994, 2139
BpuMI	CCSGG	1 cut(s)	601
Bsa29I	ATCGAT	1 cut(s)	1665
BsaBI	GATNNNNATC	1 cut(s)	1527
BsaI	GGTCTC	2 cut(s)	590, 2028
BsaJI	CCNNGG	7 cut(s)	35, 204, 344, 622, 1363, 1364, 2104
BsaWI	WCCGGW	2 cut(s)	991, 2181
BsaXI	ACNNNNNCTCC	2 cut(s)	914, 944
Bsc4I	CCNNNNNNNGG	7 cut(s)	95, 405, 1246, 1617, 1993, 2230, 2254
Bse118I	RCCGGY	2 cut(s)	66, 991
Bse1I	ACTGG	4 cut(s)	409, 513, 1240, 2044
Bse3DI	GCAATG	1 cut(s)	769
Bse8I	GATNNNNATC	1 cut(s)	1527
BseBI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
BseCI	ATCGAT	1 cut(s)	1665
BseDI	CCNNGG	7 cut(s)	35, 204, 344, 622, 1363, 1364, 2104
BseGI	GGATG	6 cut(s)	748, 765, 940, 1439, 1582, 2048
BseJI	GATNNNNATC	1 cut(s)	1527
BseLI	CCNNNNNNNGG	7 cut(s)	95, 405, 1246, 1617, 1993, 2230, 2254
BseMI	GCAATG	1 cut(s)	769
BseMII	CTCAG	5 cut(s)	705, 1458, 1632, 1704, 1779
BseNI	ACTGG	4 cut(s)	409, 513, 1240, 2044
BseRI	GAGGAG	1 cut(s)	131
BseSI	GKGCMC	2 cut(s)	412, 512
BseX3I	CGGCCG	2 cut(s)	64, 105
BseXI	GCAGC	3 cut(s)	27, 1681, 1867
BseYI	CCCAGC	2 cut(s)	1962, 2069
BsgI	GTGCAG	1 cut(s)	1435
Bsh1236I	CGCG	2 cut(s)	135, 904
Bsh1285I	CGRYCG	3 cut(s)	67, 108, 181
BshTI	ACCGGT	1 cut(s)	991
BshVI	ATCGAT	1 cut(s)	1665
BsiEI	CGRYCG	3 cut(s)	67, 108, 181
BsiHKAI	GWGCWC	2 cut(s)	141, 1056
BsiSI	CCGG	5 cut(s)	67, 104, 600, 992, 2182
BslFI	GGGAC	4 cut(s)	362, 857, 1262, 1335
BslI	CCNNNNNNNGG	7 cut(s)	95, 405, 1246, 1617, 1993, 2230, 2254
BsmAI	GTCTC	4 cut(s)	266, 590, 1637, 2028
BsmFI	GGGAC	4 cut(s)	362, 857, 1262, 1335
BsmI	GAATGC	2 cut(s)	192, 1911
Bso31I	GGTCTC	2 cut(s)	590, 2028
Bsp120I	GGGCCC	1 cut(s)	508
Bsp1286I	GDGCHC	4 cut(s)	141, 412, 512, 1056
Bsp1407I	TGTACA	1 cut(s)	949
Bsp19I	CCATGG	2 cut(s)	35, 622
Bsp68I	TCGCGA	1 cut(s)	135
BspACI	CCGC	8 cut(s)	20, 43, 154, 775, 814, 904, 938, 2248
BspCNI	CTCAG	5 cut(s)	706, 1457, 1633, 1703, 1780
BspDI	ATCGAT	1 cut(s)	1665
BspFNI	CGCG	2 cut(s)	135, 904
BspHI	TCATGA	3 cut(s)	220, 880, 2270
BspLI	GGNNCC	3 cut(s)	510, 511, 896
BspPI	GGATC	6 cut(s)	80, 1136, 1377, 1602, 2081, 2272
BspTI	CTTAAG	1 cut(s)	550
BspTNI	GGTCTC	2 cut(s)	590, 2028
BsrDI	GCAATG	1 cut(s)	769
BsrFI	RCCGGY	2 cut(s)	66, 991
BsrGI	TGTACA	1 cut(s)	949
BsrI	ACTGG	4 cut(s)	409, 513, 1240, 2044
BssAI	RCCGGY	2 cut(s)	66, 991
BssECI	CCNNGG	7 cut(s)	35, 204, 344, 622, 1363, 1364, 2104
BssT1I	CCWWGG	3 cut(s)	35, 204, 622
Bst2UI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
Bst4CI	ACNGT	6 cut(s)	277, 841, 1761, 2097, 2105, 2189
Bst6I	CTCTTC	1 cut(s)	978
BstAFI	CTTAAG	1 cut(s)	550
BstAUI	TGTACA	1 cut(s)	949
BstC8I	GCNNGC	5 cut(s)	68, 133, 137, 1950, 2076
BstDEI	CTNAG	6 cut(s)	714, 1313, 1444, 1641, 1690, 1788
BstDSI	CCRYGG	3 cut(s)	35, 622, 2104
BstF5I	GGATG	6 cut(s)	748, 765, 940, 1439, 1582, 2048
BstFNI	CGCG	2 cut(s)	135, 904
BstHHI	GCGC	2 cut(s)	192, 904
BstMAI	GTCTC	4 cut(s)	266, 590, 1637, 2028
BstMCI	CGRYCG	3 cut(s)	67, 108, 181
BstMWI	GCNNNNNNNGC	6 cut(s)	46, 416, 1268, 1703, 2054, 2075
BstNI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
BstNSI	RCATGY	2 cut(s)	74, 739
BstSCI	CCNGG	9 cut(s)	343, 376, 381, 599, 751, 897, 1009, 1363, 1732
BstSFI	CTRYAG	2 cut(s)	1612, 2251
BstSLI	GKGCMC	2 cut(s)	412, 512
BstUI	CGCG	2 cut(s)	135, 904
BstV1I	GCAGC	3 cut(s)	27, 1681, 1867
BstV2I	GAAGAC	1 cut(s)	2167
BstX2I	RGATCY	7 cut(s)	259, 447, 1141, 1369, 1607, 2086, 2264
BstYI	RGATCY	7 cut(s)	259, 447, 1141, 1369, 1607, 2086, 2264
BstZI	CGGCCG	2 cut(s)	64, 105
Bsu15I	ATCGAT	1 cut(s)	1665
BsuTUI	ATCGAT	1 cut(s)	1665
BtgI	CCRYGG	3 cut(s)	35, 622, 2104
BtgZI	GCGATG	1 cut(s)	605
BtrI	CACGTC	1 cut(s)	61
BtsCI	GGATG	6 cut(s)	748, 765, 940, 1439, 1582, 2048
BtsI	GCAGTG	2 cut(s)	426, 1251
BtsIMutI	CAGTG	6 cut(s)	402, 410, 426, 1251, 1766, 2037
BtuMI	TCGCGA	1 cut(s)	135
Cac8I	GCNNGC	5 cut(s)	68, 133, 137, 1950, 2076
CciI	TCATGA	3 cut(s)	220, 880, 2270
CfoI	GCGC	2 cut(s)	192, 904
Cfr10I	RCCGGY	2 cut(s)	66, 991
Cfr13I	GGNCC	8 cut(s)	359, 508, 509, 619, 824, 966, 1097, 1437
ClaI	ATCGAT	1 cut(s)	1665
CseI	GACGC	1 cut(s)	55
Csp6I	GTAC	8 cut(s)	516, 671, 931, 950, 1556, 1686, 1851, 1999
CspAI	ACCGGT	1 cut(s)	991
CviQI	GTAC	8 cut(s)	516, 671, 931, 950, 1556, 1686, 1851, 1999
DdeI	CTNAG	6 cut(s)	714, 1313, 1444, 1641, 1690, 1788
DraI	TTTAAA	1 cut(s)	1720
EaeI	YGGCCR	2 cut(s)	64, 105
EagI	CGGCCG	2 cut(s)	64, 105
Eam1104I	CTCTTC	1 cut(s)	978
EarI	CTCTTC	1 cut(s)	978
EclXI	CGGCCG	2 cut(s)	64, 105
Eco130I	CCWWGG	3 cut(s)	35, 204, 622
Eco24I	GRGCYC	1 cut(s)	512
Eco31I	GGTCTC	2 cut(s)	590, 2028
Eco47I	GGWCC	3 cut(s)	619, 824, 966
Eco52I	CGGCCG	2 cut(s)	64, 105
Eco57I	CTGAAG	2 cut(s)	32, 1224
EcoO109I	RGGNCCY	3 cut(s)	359, 508, 509
EcoRII	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
EcoT14I	CCWWGG	3 cut(s)	35, 204, 622
EcoT38I	GRGCYC	1 cut(s)	512
ErhI	CCWWGG	3 cut(s)	35, 204, 622
FalI	AAGNNNNNCTT	2 cut(s)	945, 977
FaqI	GGGAC	4 cut(s)	362, 857, 1262, 1335
FauNDI	CATATG	3 cut(s)	1594, 1675, 2228
FbaI	TGATCA	3 cut(s)	1426, 1629, 2193
Fnu4HI	GCNGC	4 cut(s)	41, 775, 1695, 1881
FokI	GGATG	6 cut(s)	735, 772, 927, 1446, 1589, 2055
FriOI	GRGCYC	1 cut(s)	512
Fsp4HI	GCNGC	4 cut(s)	41, 775, 1695, 1881
FspAI	RTGCGCAY	1 cut(s)	191
FspBI	CTAG	3 cut(s)	1520, 1908, 2112
FspI	TGCGCA	1 cut(s)	191
GlaI	GCGC	2 cut(s)	191, 903
GluI	GCNGC	4 cut(s)	41, 775, 1695, 1881
GsaI	CCCAGC	2 cut(s)	1966, 2073
HapII	CCGG	5 cut(s)	67, 104, 600, 992, 2182
HgaI	GACGC	1 cut(s)	55
HhaI	GCGC	2 cut(s)	192, 904
Hin6I	GCGC	2 cut(s)	190, 902
HinP1I	GCGC	2 cut(s)	190, 902
HincII	GTYRAC	1 cut(s)	1281
HindII	GTYRAC	1 cut(s)	1281
HindIII	AAGCTT	2 cut(s)	1704, 1920
HinfI	GANTC	5 cut(s)	31, 1179, 1340, 1528, 1802
HpaII	CCGG	5 cut(s)	67, 104, 600, 992, 2182
HphI	GGTGA	6 cut(s)	397, 575, 1523, 1664, 2156, 2188
Hpy166II	GTNNAC	6 cut(s)	497, 1281, 1514, 1785, 2001, 2035
Hpy188III	TCNNGA	9 cut(s)	124, 134, 221, 535, 881, 997, 1373, 2156, 2271
Hpy8I	GTNNAC	6 cut(s)	497, 1281, 1514, 1785, 2001, 2035
Hpy99I	CGWCG	2 cut(s)	65, 272
HpyAV	CCTTC	8 cut(s)	121, 288, 436, 560, 750, 1312, 1454, 1881
HpyCH4III	ACNGT	6 cut(s)	277, 841, 1761, 2097, 2105, 2189
HpyCH4IV	ACGT	1 cut(s)	60
HpyCH4V	TGCA	9 cut(s)	917, 1039, 1092, 1168, 1222, 1452, 1764, 2101, 2207
HpyF10VI	GCNNNNNNNGC	6 cut(s)	46, 416, 1268, 1703, 2054, 2075
HpyF3I	CTNAG	6 cut(s)	714, 1313, 1444, 1641, 1690, 1788
HpySE526I	ACGT	1 cut(s)	60
HspAI	GCGC	2 cut(s)	190, 902
KroI	GCCGGC	1 cut(s)	66
KroNI	GCCGGC	1 cut(s)	68
Ksp22I	TGATCA	3 cut(s)	1426, 1629, 2193
LmnI	GCTCC	5 cut(s)	179, 587, 677, 744, 859
Lsp1109I	GCAGC	3 cut(s)	27, 1681, 1867
LweI	GCATC	7 cut(s)	949, 990, 1513, 1531, 1721, 1773, 2056
MaeI	CTAG	3 cut(s)	1520, 1908, 2112
MaeII	ACGT	1 cut(s)	60
MaeIII	GTNAC	3 cut(s)	277, 544, 1652
MflI	RGATCY	7 cut(s)	259, 447, 1141, 1369, 1607, 2086, 2264
MhlI	GDGCHC	4 cut(s)	141, 412, 512, 1056
MluCI	AATT	8 cut(s)	304, 639, 1147, 1328, 1357, 1503, 1724, 2125
MlyI	GAGTC	1 cut(s)	1811
MmeI	TCCRAC	2 cut(s)	1602, 2114
MroNI	GCCGGC	1 cut(s)	66
MseI	TTAA	5 cut(s)	290, 551, 867, 1115, 1719
MslI	CAYNNNNRTG	4 cut(s)	474, 627, 685, 1217
MspA1I	CMGCKG	2 cut(s)	1694, 2250
MspCI	CTTAAG	1 cut(s)	550
MspI	CCGG	5 cut(s)	67, 104, 600, 992, 2182
MspR9I	CCNGG	9 cut(s)	345, 378, 383, 601, 753, 899, 1011, 1365, 1734
Mva1269I	GAATGC	2 cut(s)	192, 1911
MvaI	CCWGG	8 cut(s)	345, 378, 383, 753, 899, 1011, 1365, 1734
MvnI	CGCG	2 cut(s)	135, 904
MwoI	GCNNNNNNNGC	6 cut(s)	46, 416, 1268, 1703, 2054, 2075
NaeI	GCCGGC	1 cut(s)	68
NciI	CCSGG	1 cut(s)	601
NcoI	CCATGG	2 cut(s)	35, 622
NdeI	CATATG	3 cut(s)	1594, 1675, 2228
NgoMIV	GCCGGC	1 cut(s)	66
NlaIV	GGNNCC	3 cut(s)	510, 511, 896
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	1 cut(s)	1652
NruI	TCGCGA	1 cut(s)	135
NsbI	TGCGCA	1 cut(s)	191
NspI	RCATGY	2 cut(s)	74, 739
PagI	TCATGA	3 cut(s)	220, 880, 2270
PasI	CCCWGGG	1 cut(s)	1364
PctI	GAATGC	2 cut(s)	192, 1911
PdiI	GCCGGC	1 cut(s)	68
PfeI	GAWTC	4 cut(s)	31, 1179, 1340, 1528
PfoI	TCCNGGA	1 cut(s)	751
PinAI	ACCGGT	1 cut(s)	991
PkrI	GCNGC	4 cut(s)	42, 776, 1696, 1882
Ple19I	CGATCG	1 cut(s)	181
PleI	GAGTC	1 cut(s)	1810
PpsI	GAGTC	1 cut(s)	1810
Psp6I	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
PspFI	CCCAGC	2 cut(s)	1962, 2069
PspGI	CCWGG	8 cut(s)	343, 376, 381, 751, 897, 1009, 1363, 1732
PspN4I	GGNNCC	3 cut(s)	510, 511, 896
PspOMI	GGGCCC	1 cut(s)	508
PspPI	GGNCC	8 cut(s)	359, 508, 509, 619, 824, 966, 1097, 1437
PsuI	RGATCY	7 cut(s)	259, 447, 1141, 1369, 1607, 2086, 2264
PvuI	CGATCG	1 cut(s)	181
PvuII	CAGCTG	1 cut(s)	1694
RruI	TCGCGA	1 cut(s)	135
RsaI	GTAC	8 cut(s)	517, 672, 932, 951, 1557, 1687, 1852, 2000
RsaNI	GTAC	8 cut(s)	516, 671, 931, 950, 1556, 1686, 1851, 1999
RseI	CAYNNNNRTG	4 cut(s)	474, 627, 685, 1217
SaqAI	TTAA	5 cut(s)	290, 551, 867, 1115, 1719
SatI	GCNGC	4 cut(s)	41, 775, 1695, 1881
Sau96I	GGNCC	8 cut(s)	359, 508, 509, 619, 824, 966, 1097, 1437
ScaI	AGTACT	1 cut(s)	672
SchI	GAGTC	1 cut(s)	1811
ScrFI	CCNGG	9 cut(s)	345, 378, 383, 601, 753, 899, 1011, 1365, 1734
SduI	GDGCHC	4 cut(s)	141, 412, 512, 1056
SfaNI	GCATC	7 cut(s)	949, 990, 1513, 1531, 1721, 1773, 2056
SfcI	CTRYAG	2 cut(s)	1612, 2251
SinI	GGWCC	3 cut(s)	619, 824, 966
SmiMI	CAYNNNNRTG	4 cut(s)	474, 627, 685, 1217
SmlI	CTYRAG	4 cut(s)	113, 550, 2009, 2154
SmoI	CTYRAG	4 cut(s)	113, 550, 2009, 2154
Sse9I	AATT	8 cut(s)	304, 639, 1147, 1328, 1357, 1503, 1724, 2125
SsiI	CCGC	8 cut(s)	20, 43, 154, 775, 814, 904, 938, 2248
SspMI	CTAG	3 cut(s)	1520, 1908, 2112
StyD4I	CCNGG	9 cut(s)	343, 376, 381, 599, 751, 897, 1009, 1363, 1732
StyI	CCWWGG	3 cut(s)	35, 204, 622
TaaI	ACNGT	6 cut(s)	277, 841, 1761, 2097, 2105, 2189
TaiI	ACGT	1 cut(s)	63
TaqI	TCGA	5 cut(s)	84, 123, 454, 1374, 1665
TaqII	GACCGA	1 cut(s)	281
TasI	AATT	8 cut(s)	304, 639, 1147, 1328, 1357, 1503, 1724, 2125
TatI	WGTACW	4 cut(s)	670, 930, 949, 1998
TauI	GCSGC	1 cut(s)	777
TfiI	GAWTC	4 cut(s)	31, 1179, 1340, 1528
Tru1I	TTAA	5 cut(s)	290, 551, 867, 1115, 1719
Tru9I	TTAA	5 cut(s)	290, 551, 867, 1115, 1719
TscAI	CASTG	6 cut(s)	409, 417, 426, 1258, 1766, 2044
TseFI	GTSAC	1 cut(s)	1652
TseI	GCWGC	3 cut(s)	40, 1694, 1880
Tsp45I	GTSAC	1 cut(s)	1652
TspGWI	ACGGA	1 cut(s)	269
TspRI	CASTG	6 cut(s)	409, 417, 426, 1258, 1766, 2044
Vha464I	CTTAAG	1 cut(s)	550
VpaK11BI	GGWCC	3 cut(s)	619, 824, 966
XapI	RAATTY	4 cut(s)	304, 1147, 1328, 2125
XceI	RCATGY	2 cut(s)	74, 739
XcmI	CCANNNNNNNNNTGG	2 cut(s)	759, 2233
XspI	CTAG	3 cut(s)	1520, 1908, 2112
ZrmI	AGTACT	1 cut(s)	672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.