Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0002898

Physical Location & Seq

Genomic Coordinates Forward (+)

6566668 .. 6572898

Gene Structure 6231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g08550.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGTGGAAGCTGAAGGTAGGGGCAGAGACAGTAGGAGGAGAAAGTGGAGGTCAGTGGCTGAAGAGTGTGAACAACCACTTGGGCCGCCAAGTGTGGGAGTTCCATCCAGAGATTGGAACCCCAGAAGAGCTTCAACAAATTGAAGATGCCCGCAAGGCTTTCTGGAACAATCGTTTCGAAAGGCGGCACAGCTCTGACCTCCTCATGAGAATTCAGTTTGCAAAGGAGAATCCACATGCCACTAATCTACCGCAACTCAAAGTTAAAGATCAAGAAGGGGTGAAGGAAGAGGCAGTGGCAACCACTTTACGAAGGGCTCTCAGTTTTTATTCAACAATCCAGGCGCATGATGGTCATTGGGCTGGGGATTATGGGGGTCCCATGTTTCTGCTCCCTGGTTTGAATGAAGATGGGGGATGGGGTCTGCATATTGAGGGGCCAAGTACCATGTTTGGTACTGCTCTAAATTATGTTACTTTGAGGTTGCTTGGCGAAGGTGCGGATGATGGACAAGGGGCAATCGAACTTGCACGGAAATGGATATTAGACCATGGTGGCGTGACTGCAATTACTTCTTGGGGCAAAATGTGGCTTTCAGTACTTGGGGCATATGAATGGTCTGGGAATAATCCACTGCCGCCTGAAGTATGGCTATGTCCTTACTCCCTGCCATTTCATCCAGGAAGAATGTGGTGTCATTGCCGAATGGTGTATTTGCCTATGTCGTATTTGTATGGGAAAAGGTTTGTTGGACCTATCACACCCACAATCCGGTCATTGAGGAAGGAGCTTTATACAGTCCCCTATCATGAAGTTGACTGGAATAAAGCTCGCAATCTATGTGCAAAGGTTGGTAAGAAACATCTGCGCCTTCAATATACTCTGCTTCCTCCAGCTACCCTGCGTAAAGATCCCGTGTCTGTGAGTTTAATGAACATTCTTATCTTTCATAGGGAAGATCTATACTATCCACACCCAATGGTACAAGATGTCTTGTGGGGGTCTCTTCACTATGTTTATGAACCTGTTTTCACACGTTGGCCTGCAAAAGAATTGAGGGAGAGTGCTTTGAAGACTGTAATGCAGCATATTCATTATGAAGATGAAAATACTCGGTACATATGCATAGGGCCTGTTAACAAGGTGTTAAATATGCTTTGTTGTTGGGCGGAGGATCCAAACTCAGAGGCATTCAAATTGCATCTCCCGAGAATCCCTGATTATTTGTGGATTGCTGAAGATGGCATGAAAATGCAGGGCTACAATGGAAGTCAAGCATGGGATACTTCTTTTGCCATTCAAGCGATTATATCAACCAACCTGGTTGAAGAATATGGACCTACTTTAAGAAAAGCGCATCAGTATATCAAAGATTCCCAGGTCTTGGAAGATTGTCCTGGAGATCTGGATTATTGGTATCGTCACATTTCAAAAGGTGCTTGGCCATTCTCAACAGCAGATCATGGGTGGCCTATCTCTGACTGCACAGCTGAAGGACTGAAGGCTGCCTTATTACTATCGAAACTTCCAACACAAACAGTTGGTGAATCATTGGATATGAAGCGATTTTATGATGCTGTAAATGTTACCCTTTCCTTACAGAATGACGATGGTGGTTTTGCCACTTATGAACTAACTAGATCGTATCAGTGGTTAGAGCTAATCAACCCTGCCGAAACTTTTGGTGACATCGTCATTGATTATCCATATGTTGAATGCACCTCAGCAGCAATTCAAGCACTTGCATTGTTCAAAAGGTTATGTCCTGGGCATAGGAGTGATGAAATAGAAAACTGCATTGCTCGTGCTGCAAAGTTCATTGAAACGATACAAGCAGCGGATGGATCTTGGTATGGTTCCTGGGGAGTATGCTTCACCTATGCTGGCTGGTTTGGAATAAAGGGGTTGGTTGCTGCGGGAAGGACATACGAAGACTGCTCAAGCATCCGTAAAGCATGCGACTTTTTGTTATCCAAAGAGCTTCCTTCAGGTGGATGGGGAGAAAGCTATCTATCATGTCAGAACAAGGTGTATACAAATCTCAAGGACAATAGGCCACATATAGTTCAAACTGCATGGGCTATGTTGGCCCTTATTGGTGCTGGGCAGGCTAAGAGAGACCCAACTCCGTTGCATCGGGCAGCTAGAGTACTAATCAATTCTCAAATGAAAAATGGAGATTTCCCACAGAAGGAGATCACTGGTGTCTTCAACAAGAACTGTATGATCAGCTATTCAGCCTACCGAAACATTTTTCCCATTTGGGCCCTTGGAGAATATCGTTGCCAAGTATTGGAGGCTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 map00100 map01100 map01110

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

769

Amino Acids

87.15

Weight (kDa)

6.4

Isoelectric Point (pI)

41.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07050 AT2G07050
fragaria_vesca	FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_4g05990 FvH4_6g36510 FvH4_6g36510
malus_domestica	MD00G1130000.v1.1 MD00G1220900.v1.1 MD13G1232100.v1.1 MD16G1237000.v1.1 MD17G1159900.v1.1 MD17G1245900.v1.1 MD17G1246400.v1.1
prunus_persica	Prupe.1G063400_v2.0.a1 Prupe.3G026100_v2.0.a1 Prupe.3G026100_v2.0.a1
pyrus_communis	pycom09g08550
rosa_chinensis	RchiOBHm_Chr2g0148711 RchiOBHm_Chr2g0148821 RchiOBHm_Chr2g0148951 RchiOBHm_Chr4g0397221
rosa_laevigata	RLG00000009438 RLG00000020359
rosa_multiflora	Rmu_sc0001796.1_g000004 Rmu_sc0002312.1_g000065 Rmu_sc0008532.1_g000008 Rmu_sc0017689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098550 Rroxscaffold_5G00342160
rosa_rugosa	Rorug03G0225900 Rorug03G0343900 Rorug03G0343900
rosa_samantha	Rh2AG467200 Rh2DG488900
rosa_wichuraiana	Rw2G038090 Rw4G006310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	113, 1384, 2293
AccI	GTMKAC	1 cut(s)	2033
AciI	CCGC	9 cut(s)	85, 151, 184, 251, 500, 638, 1169, 1838, 1916
AclWI	GGATC	4 cut(s)	905, 1169, 1182, 1852
AcoI	YGGCCR	1 cut(s)	1442
AcsI	RAATTY	1 cut(s)	210
AcuI	CTGAAG	7 cut(s)	32, 80, 663, 1257, 1512, 1520, 1971
AfaI	GTAC	6 cut(s)	445, 457, 600, 984, 1118, 2151
AfiI	CCNNNNNNNGG	7 cut(s)	94, 113, 771, 1384, 1991, 2191, 2293
AflIII	ACRYGT	1 cut(s)	1034
AjnI	CCWGG	8 cut(s)	339, 394, 679, 1320, 1377, 1396, 1765, 1859
AjuI	GAANNNNNNNTTGG	2 cut(s)	62, 94
Alw26I	GTCTC	3 cut(s)	20, 1008, 2112
AlwI	GGATC	4 cut(s)	905, 1169, 1182, 1852
AlwNI	CAGNNNCTG	1 cut(s)	58
Ama87I	CYCGRG	1 cut(s)	1207
AoxI	GGCC	9 cut(s)	82, 437, 1040, 1130, 1442, 1469, 2054, 2088, 2265
ApaI	GGGCCC	1 cut(s)	2269
ApeKI	GCWGC	7 cut(s)	1084, 1505, 1727, 1808, 1835, 1913, 2141
ApoI	RAATTY	1 cut(s)	210
Asp700I	GAANNNNTTC	1 cut(s)	129
AspLEI	GCGC	3 cut(s)	346, 870, 1357
AspS9I	GGNCC	9 cut(s)	82, 377, 437, 752, 1130, 1337, 2089, 2265, 2266
AsuHPI	GGTGA	4 cut(s)	292, 1556, 1697, 1867
AsuII	TTCGAA	1 cut(s)	177
AvaI	CYCGRG	1 cut(s)	1207
AvaII	GGWCC	3 cut(s)	377, 752, 1337
BaeGI	GKGCMC	1 cut(s)	2269
BalI	TGGCCA	1 cut(s)	1444
BamHI	GGATCC	1 cut(s)	1174
BanII	GRGCYC	2 cut(s)	319, 2269
BauI	CACGAG	1 cut(s)	1803
BbsI	GAAGAC	3 cut(s)	1079, 1938, 2200
BbvCI	CCTCAGC	1 cut(s)	1723
BbvI	GCAGC	7 cut(s)	1096, 1492, 1739, 1795, 1847, 1900, 2153
BccI	CCATC	9 cut(s)	111, 344, 404, 411, 500, 1235, 1604, 1835, 1989
BciT130I	CCWGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
BciVI	GTATCC	1 cut(s)	1276
BclI	TGATCA	1 cut(s)	2226
BcoDI	GTCTC	3 cut(s)	20, 1008, 2112
BfaI	CTAG	2 cut(s)	1638, 2145
BfuI	GTATCC	1 cut(s)	1276
BglI	GCCNNNNNGGC	1 cut(s)	155
BglII	AGATCT	2 cut(s)	958, 1402
BmcAI	AGTACT	2 cut(s)	600, 2151
Bme1390I	CCNGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
Bme18I	GGWCC	3 cut(s)	377, 752, 1337
BmeT110I	CYCGRG	1 cut(s)	1207
BmgT120I	GGNCC	9 cut(s)	82, 377, 437, 752, 1130, 1337, 2089, 2265, 2266
BmiI	GGNNCC	7 cut(s)	118, 378, 379, 438, 1176, 1858, 2267
BmrFI	CCNGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
BmsI	GCATC	6 cut(s)	136, 1210, 1366, 1564, 1953, 2143
BpiI	GAAGAC	3 cut(s)	1079, 1938, 2200
BpmI	CTGGAG	2 cut(s)	876, 1419
Bpu10I	CCTNAGC	1 cut(s)	1723
Bpu14I	TTCGAA	1 cut(s)	177
BpuEI	CTTGAG	2 cut(s)	1924, 2027
BsaI	GGTCTC	2 cut(s)	1008, 2112
BsaJI	CCNNGG	6 cut(s)	394, 550, 1377, 1766, 1860, 2269
BsaWI	WCCGGW	1 cut(s)	771
Bsc4I	CCNNNNNNNGG	7 cut(s)	94, 113, 771, 1384, 1991, 2191, 2293
Bse1I	ACTGG	2 cut(s)	824, 2206
Bse3DI	GCAATG	2 cut(s)	697, 1797
BseBI	CCWGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
BseDI	CCNNGG	6 cut(s)	394, 550, 1377, 1766, 1860, 2269
BseGI	GGATG	7 cut(s)	103, 422, 508, 676, 1846, 1944, 2000
BseLI	CCNNNNNNNGG	7 cut(s)	94, 113, 771, 1384, 1991, 2191, 2293
BseMI	GCAATG	2 cut(s)	697, 1797
BseMII	CTCAG	3 cut(s)	334, 1197, 1737
BseNI	ACTGG	2 cut(s)	824, 2206
BseRI	GAGGAG	2 cut(s)	51, 191
BseSI	GKGCMC	1 cut(s)	2269
BseXI	GCAGC	7 cut(s)	1096, 1492, 1739, 1795, 1847, 1900, 2153
BseYI	CCCAGC	2 cut(s)	362, 2102
BsgI	GTGCAG	1 cut(s)	1468
BshFI	GGCC	9 cut(s)	84, 439, 1042, 1132, 1444, 1471, 2056, 2090, 2267
BsiHKCI	CYCGRG	1 cut(s)	1207
BsiSI	CCGG	1 cut(s)	772
BslFI	GGGAC	2 cut(s)	363, 785
BslI	CCNNNNNNNGG	7 cut(s)	94, 113, 771, 1384, 1991, 2191, 2293
BsmAI	GTCTC	3 cut(s)	20, 1008, 2112
BsmFI	GGGAC	2 cut(s)	363, 785
BsmI	GAATGC	2 cut(s)	1190, 1721
BsnI	GGCC	9 cut(s)	84, 439, 1042, 1132, 1444, 1471, 2056, 2090, 2267
Bso31I	GGTCTC	2 cut(s)	1008, 2112
BsoBI	CYCGRG	1 cut(s)	1207
Bsp119I	TTCGAA	1 cut(s)	177
Bsp120I	GGGCCC	1 cut(s)	2265
Bsp1286I	GDGCHC	2 cut(s)	319, 2269
Bsp19I	CCATGG	1 cut(s)	550
BspACI	CCGC	9 cut(s)	85, 151, 184, 251, 500, 638, 1169, 1838, 1916
BspANI	GGCC	9 cut(s)	84, 439, 1042, 1132, 1444, 1471, 2056, 2090, 2267
BspCNI	CTCAG	3 cut(s)	333, 1196, 1736
BspHI	TCATGA	2 cut(s)	204, 808
BspLI	GGNNCC	7 cut(s)	118, 378, 379, 438, 1176, 1858, 2267
BspPI	GGATC	4 cut(s)	905, 1169, 1182, 1852
BspQI	GCTCTTC	1 cut(s)	120
BspT104I	TTCGAA	1 cut(s)	177
BspTNI	GGTCTC	2 cut(s)	1008, 2112
BsrDI	GCAATG	2 cut(s)	697, 1797
BsrI	ACTGG	2 cut(s)	824, 2206
BssECI	CCNNGG	6 cut(s)	394, 550, 1377, 1766, 1860, 2269
BssNAI	GTATAC	1 cut(s)	2034
BssSI	CACGAG	1 cut(s)	1803
BssT1I	CCWWGG	2 cut(s)	550, 2269
Bst1107I	GTATAC	1 cut(s)	2034
Bst2BI	CACGAG	1 cut(s)	1803
Bst2UI	CCWGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
Bst4CI	ACNGT	5 cut(s)	31, 799, 1078, 1540, 2222
Bst6I	CTCTTC	4 cut(s)	56, 120, 282, 1011
BstBI	TTCGAA	1 cut(s)	177
BstC8I	GCNNGC	6 cut(s)	151, 832, 1044, 1885, 1957, 2109
BstDEI	CTNAG	4 cut(s)	320, 1183, 1723, 2112
BstDSI	CCRYGG	1 cut(s)	550
BstF5I	GGATG	7 cut(s)	103, 422, 508, 676, 1846, 1944, 2000
BstHHI	GCGC	3 cut(s)	346, 870, 1357
BstMAI	GTCTC	3 cut(s)	20, 1008, 2112
BstMWI	GCNNNNNNNGC	6 cut(s)	155, 1301, 1736, 1808, 2087, 2108
BstNI	CCWGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
BstNSI	RCATGY	2 cut(s)	239, 1959
BstSCI	CCNGG	8 cut(s)	339, 394, 679, 1320, 1377, 1396, 1765, 1859
BstSLI	GKGCMC	1 cut(s)	2269
BstV1I	GCAGC	7 cut(s)	1096, 1492, 1739, 1795, 1847, 1900, 2153
BstV2I	GAAGAC	3 cut(s)	1079, 1938, 2200
BstX2I	RGATCY	5 cut(s)	910, 958, 1174, 1402, 1844
BstYI	RGATCY	5 cut(s)	910, 958, 1174, 1402, 1844
BstZ17I	GTATAC	1 cut(s)	2034
BsuI	GTATCC	1 cut(s)	1276
BsuRI	GGCC	9 cut(s)	84, 439, 1042, 1132, 1444, 1471, 2056, 2090, 2267
BtgI	CCRYGG	1 cut(s)	550
BtsCI	GGATG	7 cut(s)	103, 422, 508, 676, 1846, 1944, 2000
BtsI	GCAGTG	2 cut(s)	300, 632
BtsIMutI	CAGTG	5 cut(s)	59, 300, 632, 1655, 2199
Cac8I	GCNNGC	6 cut(s)	151, 832, 1044, 1885, 1957, 2109
CaiI	CAGNNNCTG	1 cut(s)	58
CciI	TCATGA	2 cut(s)	204, 808
CfoI	GCGC	3 cut(s)	346, 870, 1357
Cfr13I	GGNCC	9 cut(s)	82, 377, 437, 752, 1130, 1337, 2089, 2265, 2266
CsiI	ACCWGGT	1 cut(s)	1320
Csp6I	GTAC	6 cut(s)	444, 456, 599, 983, 1117, 2150
CviQI	GTAC	6 cut(s)	444, 456, 599, 983, 1117, 2150
DdeI	CTNAG	4 cut(s)	320, 1183, 1723, 2112
EaeI	YGGCCR	1 cut(s)	1442
Eam1104I	CTCTTC	4 cut(s)	56, 120, 282, 1011
EarI	CTCTTC	4 cut(s)	56, 120, 282, 1011
EciI	GGCGGA	1 cut(s)	1184
Eco130I	CCWWGG	2 cut(s)	550, 2269
Eco24I	GRGCYC	2 cut(s)	319, 2269
Eco31I	GGTCTC	2 cut(s)	1008, 2112
Eco47I	GGWCC	3 cut(s)	377, 752, 1337
Eco57I	CTGAAG	7 cut(s)	32, 80, 663, 1257, 1512, 1520, 1971
Eco88I	CYCGRG	1 cut(s)	1207
EcoO109I	RGGNCCY	3 cut(s)	377, 1130, 2266
EcoRI	GAATTC	1 cut(s)	210
EcoRII	CCWGG	8 cut(s)	339, 394, 679, 1320, 1377, 1396, 1765, 1859
EcoT14I	CCWWGG	2 cut(s)	550, 2269
EcoT22I	ATGCAT	1 cut(s)	1127
EcoT38I	GRGCYC	2 cut(s)	319, 2269
ErhI	CCWWGG	2 cut(s)	550, 2269
FalI	AAGNNNNNCTT	2 cut(s)	1493, 1525
FaqI	GGGAC	2 cut(s)	363, 785
FauI	CCCGC	2 cut(s)	158, 1909
FauNDI	CATATG	3 cut(s)	610, 1121, 1708
FbaI	TGATCA	1 cut(s)	2226
FblI	GTMKAC	1 cut(s)	2033
FokI	GGATG	7 cut(s)	90, 429, 515, 663, 1853, 1931, 2007
FriOI	GRGCYC	2 cut(s)	319, 2269
FspBI	CTAG	2 cut(s)	1638, 2145
GlaI	GCGC	3 cut(s)	345, 869, 1356
GsaI	CCCAGC	2 cut(s)	366, 2106
GsuI	CTGGAG	2 cut(s)	876, 1419
HaeIII	GGCC	9 cut(s)	84, 439, 1042, 1132, 1444, 1471, 2056, 2090, 2267
HapII	CCGG	1 cut(s)	772
HhaI	GCGC	3 cut(s)	346, 870, 1357
Hin6I	GCGC	3 cut(s)	344, 868, 1355
HinP1I	GCGC	3 cut(s)	344, 868, 1355
HincII	GTYRAC	2 cut(s)	817, 1138
HindII	GTYRAC	2 cut(s)	817, 1138
HinfI	GANTC	4 cut(s)	229, 1212, 1373, 1547
HpaI	GTTAAC	1 cut(s)	1138
HpaII	CCGG	1 cut(s)	772
HphI	GGTGA	4 cut(s)	292, 1556, 1697, 1867
Hpy166II	GTNNAC	4 cut(s)	70, 817, 1138, 2034
Hpy188I	TCNGA	5 cut(s)	196, 1186, 1480, 2022, 2306
Hpy188III	TCNNGA	7 cut(s)	107, 163, 205, 272, 809, 1207, 1406
Hpy8I	GTNNAC	4 cut(s)	70, 817, 1138, 2034
HpyCH4III	ACNGT	5 cut(s)	31, 799, 1078, 1540, 2222
HpyCH4IV	ACGT	1 cut(s)	1036
HpyF10VI	GCNNNNNNNGC	6 cut(s)	155, 1301, 1736, 1808, 2087, 2108
HpyF3I	CTNAG	4 cut(s)	320, 1183, 1723, 2112
HpySE526I	ACGT	1 cut(s)	1036
HspAI	GCGC	3 cut(s)	344, 868, 1355
KflI	GGGWCCC	1 cut(s)	377
Ksp22I	TGATCA	1 cut(s)	2226
KspAI	GTTAAC	1 cut(s)	1138
LguI	GCTCTTC	1 cut(s)	120
LmnI	GCTCC	2 cut(s)	396, 787
Lsp1109I	GCAGC	7 cut(s)	1096, 1492, 1739, 1795, 1847, 1900, 2153
LweI	GCATC	6 cut(s)	136, 1210, 1366, 1564, 1953, 2143
MabI	ACCWGGT	1 cut(s)	1320
MaeI	CTAG	2 cut(s)	1638, 2145
MaeII	ACGT	1 cut(s)	1036
MaeIII	GTNAC	5 cut(s)	472, 559, 1421, 1585, 1685
MflI	RGATCY	5 cut(s)	910, 958, 1174, 1402, 1844
MhlI	GDGCHC	2 cut(s)	319, 2269
MlsI	TGGCCA	1 cut(s)	1444
MluCI	AATT	8 cut(s)	138, 210, 466, 567, 1052, 1196, 1731, 2158
MluNI	TGGCCA	1 cut(s)	1444
MmeI	TCCRAC	2 cut(s)	730, 1553
Mox20I	TGGCCA	1 cut(s)	1444
Mph1103I	ATGCAT	1 cut(s)	1127
MroXI	GAANNNNTTC	1 cut(s)	129
MscI	TGGCCA	1 cut(s)	1444
MseI	TTAA	5 cut(s)	264, 929, 1137, 1148, 1346
MslI	CAYNNNNRTG	4 cut(s)	535, 613, 1250, 1776
Msp20I	TGGCCA	1 cut(s)	1444
MspA1I	CMGCKG	2 cut(s)	1490, 1838
MspI	CCGG	1 cut(s)	772
MspR9I	CCNGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
Mva1269I	GAATGC	2 cut(s)	1190, 1721
MvaI	CCWGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
MwoI	GCNNNNNNNGC	6 cut(s)	155, 1301, 1736, 1808, 2087, 2108
NcoI	CCATGG	1 cut(s)	550
NdeI	CATATG	3 cut(s)	610, 1121, 1708
NlaIV	GGNNCC	7 cut(s)	118, 378, 379, 438, 1176, 1858, 2267
NmuCI	GTSAC	3 cut(s)	559, 1421, 1685
NsiI	ATGCAT	1 cut(s)	1127
NspI	RCATGY	2 cut(s)	239, 1959
NspV	TTCGAA	1 cut(s)	177
PaeI	GCATGC	1 cut(s)	1959
PagI	TCATGA	2 cut(s)	204, 808
PciSI	GCTCTTC	1 cut(s)	120
PctI	GAATGC	2 cut(s)	1190, 1721
PdmI	GAANNNNTTC	1 cut(s)	129
PfeI	GAWTC	4 cut(s)	229, 1212, 1373, 1547
PflFI	GACNNNGTC	1 cut(s)	1691
PflMI	CCANNNNNTGG	3 cut(s)	113, 1384, 2293
PfoI	TCCNGGA	2 cut(s)	679, 1396
PpuMI	RGGWCCY	1 cut(s)	377
Psp5II	RGGWCCY	1 cut(s)	377
Psp6I	CCWGG	8 cut(s)	339, 394, 679, 1320, 1377, 1396, 1765, 1859
PspFI	CCCAGC	2 cut(s)	362, 2102
PspGI	CCWGG	8 cut(s)	339, 394, 679, 1320, 1377, 1396, 1765, 1859
PspN4I	GGNNCC	7 cut(s)	118, 378, 379, 438, 1176, 1858, 2267
PspOMI	GGGCCC	1 cut(s)	2265
PspPI	GGNCC	9 cut(s)	82, 377, 437, 752, 1130, 1337, 2089, 2265, 2266
PspPPI	RGGWCCY	1 cut(s)	377
PstNI	CAGNNNCTG	1 cut(s)	58
PsuI	RGATCY	5 cut(s)	910, 958, 1174, 1402, 1844
PsyI	GACNNNGTC	1 cut(s)	1691
PvuII	CAGCTG	1 cut(s)	1490
RsaI	GTAC	6 cut(s)	445, 457, 600, 984, 1118, 2151
RsaNI	GTAC	6 cut(s)	444, 456, 599, 983, 1117, 2150
RseI	CAYNNNNRTG	4 cut(s)	535, 613, 1250, 1776
SapI	GCTCTTC	1 cut(s)	120
SaqAI	TTAA	5 cut(s)	264, 929, 1137, 1148, 1346
Sau96I	GGNCC	9 cut(s)	82, 377, 437, 752, 1130, 1337, 2089, 2265, 2266
ScaI	AGTACT	2 cut(s)	600, 2151
ScrFI	CCNGG	8 cut(s)	341, 396, 681, 1322, 1379, 1398, 1767, 1861
SduI	GDGCHC	2 cut(s)	319, 2269
SexAI	ACCWGGT	1 cut(s)	1320
SfaNI	GCATC	6 cut(s)	136, 1210, 1366, 1564, 1953, 2143
SfuI	TTCGAA	1 cut(s)	177
SinI	GGWCC	3 cut(s)	377, 752, 1337
SmiMI	CAYNNNNRTG	4 cut(s)	535, 613, 1250, 1776
SmlI	CTYRAG	2 cut(s)	1939, 2042
SmoI	CTYRAG	2 cut(s)	1939, 2042
SphI	GCATGC	1 cut(s)	1959
Sse9I	AATT	8 cut(s)	138, 210, 466, 567, 1052, 1196, 1731, 2158
SsiI	CCGC	9 cut(s)	85, 151, 184, 251, 500, 638, 1169, 1838, 1916
SspMI	CTAG	2 cut(s)	1638, 2145
StyD4I	CCNGG	8 cut(s)	339, 394, 679, 1320, 1377, 1396, 1765, 1859
StyI	CCWWGG	2 cut(s)	550, 2269
TaaI	ACNGT	5 cut(s)	31, 799, 1078, 1540, 2222
TaiI	ACGT	1 cut(s)	1039
TaqI	TCGA	3 cut(s)	177, 522, 1520
TasI	AATT	8 cut(s)	138, 210, 466, 567, 1052, 1196, 1731, 2158
TatI	WGTACW	2 cut(s)	598, 2149
TauI	GCSGC	3 cut(s)	87, 187, 640
TfiI	GAWTC	4 cut(s)	229, 1212, 1373, 1547
Tru1I	TTAA	5 cut(s)	264, 929, 1137, 1148, 1346
Tru9I	TTAA	5 cut(s)	264, 929, 1137, 1148, 1346
TscAI	CASTG	5 cut(s)	59, 300, 639, 1655, 2206
TseFI	GTSAC	3 cut(s)	559, 1421, 1685
TseI	GCWGC	7 cut(s)	1084, 1505, 1727, 1808, 1835, 1913, 2141
Tsp45I	GTSAC	3 cut(s)	559, 1421, 1685
TspGWI	ACGGA	3 cut(s)	547, 1937, 2118
TspRI	CASTG	5 cut(s)	59, 300, 639, 1655, 2206
Tth111I	GACNNNGTC	1 cut(s)	1691
Van91I	CCANNNNNTGG	3 cut(s)	113, 1384, 2293
VpaK11BI	GGWCC	3 cut(s)	377, 752, 1337
XapI	RAATTY	1 cut(s)	210
XceI	RCATGY	2 cut(s)	239, 1959
XcmI	CCANNNNNNNNNTGG	3 cut(s)	110, 347, 687
XmiI	GTMKAC	1 cut(s)	2033
XmnI	GAANNNNTTC	1 cut(s)	129
XspI	CTAG	2 cut(s)	1638, 2145
ZrmI	AGTACT	2 cut(s)	600, 2151
Zsp2I	ATGCAT	1 cut(s)	1127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.