No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06511 FvH4_3g36980 FvH4_4g08883 FvH4_6g17112 FvH4_6g38731 FvH4_6g40891 FvH4_6g40892 |
| malus_domestica | MD05G1324200.v1.1 |
| rosa_laevigata | RLG00000020915 |
| rosa_multiflora | Rmu_sc0005392.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00093010 |
| rosa_rugosa | Rorug02G0453200 |
| rosa_samantha | Rh2AG519600 Rh2BG531900 Rh2CG504600 Rh2DG540800 Rh2DG540900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 52 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AgsI | TTSAA | 3 cut(s) | 62, 93, 275 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 197, 229 |
| AluBI | AGCT | 1 cut(s) | 172 |
| AluI | AGCT | 1 cut(s) | 172 |
| Alw26I | GTCTC | 1 cut(s) | 221 |
| ApoI | RAATTY | 1 cut(s) | 52 |
| AspS9I | GGNCC | 1 cut(s) | 181 |
| AvaII | GGWCC | 1 cut(s) | 181 |
| BccI | CCATC | 1 cut(s) | 250 |
| BcoDI | GTCTC | 1 cut(s) | 221 |
| BfaI | CTAG | 1 cut(s) | 134 |
| Bme18I | GGWCC | 1 cut(s) | 181 |
| BmgT120I | GGNCC | 1 cut(s) | 181 |
| BseGI | GGATG | 2 cut(s) | 148, 261 |
| BseMII | CTCAG | 1 cut(s) | 57 |
| BsmAI | GTCTC | 1 cut(s) | 221 |
| Bsp1407I | TGTACA | 1 cut(s) | 174 |
| Bsp143I | GATC | 1 cut(s) | 196 |
| BspCNI | CTCAG | 1 cut(s) | 58 |
| BsrGI | TGTACA | 1 cut(s) | 174 |
| BssMI | GATC | 1 cut(s) | 196 |
| BstAUI | TGTACA | 1 cut(s) | 174 |
| BstDEI | CTNAG | 1 cut(s) | 66 |
| BstF5I | GGATG | 2 cut(s) | 148, 261 |
| BstKTI | GATC | 1 cut(s) | 199 |
| BstMAI | GTCTC | 1 cut(s) | 221 |
| BstMBI | GATC | 1 cut(s) | 196 |
| BtsCI | GGATG | 2 cut(s) | 148, 261 |
| Cfr13I | GGNCC | 1 cut(s) | 181 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviAII | CATG | 2 cut(s) | 77, 217 |
| CviJI | RGCY | 1 cut(s) | 172 |
| CviKI_1 | RGCY | 1 cut(s) | 172 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DdeI | CTNAG | 1 cut(s) | 66 |
| DpnI | GATC | 1 cut(s) | 198 |
| DpnII | GATC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 1 cut(s) | 181 |
| EcoO109I | RGGNCCY | 1 cut(s) | 181 |
| FaeI | CATG | 2 cut(s) | 80, 220 |
| FaiI | YATR | 6 cut(s) | 17, 29, 78, 98, 188, 218 |
| FatI | CATG | 2 cut(s) | 76, 216 |
| FokI | GGATG | 2 cut(s) | 155, 268 |
| FspBI | CTAG | 1 cut(s) | 134 |
| Hin1II | CATG | 2 cut(s) | 80, 220 |
| HinfI | GANTC | 3 cut(s) | 68, 89, 130 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 255 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 131 |
| HpyCH4V | TGCA | 1 cut(s) | 242 |
| HpyF3I | CTNAG | 1 cut(s) | 66 |
| Hsp92II | CATG | 2 cut(s) | 80, 220 |
| Kzo9I | GATC | 1 cut(s) | 196 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MaeIII | GTNAC | 1 cut(s) | 151 |
| MalI | GATC | 1 cut(s) | 198 |
| MboI | GATC | 1 cut(s) | 196 |
| MboII | GAAGA | 5 cut(s) | 17, 92, 98, 125, 131 |
| MluCI | AATT | 2 cut(s) | 52, 289 |
| MlyI | GAGTC | 2 cut(s) | 77, 139 |
| MmeI | TCCRAC | 1 cut(s) | 233 |
| MseI | TTAA | 2 cut(s) | 162, 292 |
| MslI | CAYNNNNRTG | 1 cut(s) | 81 |
| NdeII | GATC | 1 cut(s) | 196 |
| NlaIII | CATG | 2 cut(s) | 80, 220 |
| NmuCI | GTSAC | 1 cut(s) | 151 |
| PfeI | GAWTC | 1 cut(s) | 89 |
| PleI | GAGTC | 2 cut(s) | 76, 138 |
| PpsI | GAGTC | 2 cut(s) | 76, 138 |
| PpuMI | RGGWCCY | 1 cut(s) | 181 |
| Psp5II | RGGWCCY | 1 cut(s) | 181 |
| PspPI | GGNCC | 1 cut(s) | 181 |
| PspPPI | RGGWCCY | 1 cut(s) | 181 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| RseI | CAYNNNNRTG | 1 cut(s) | 81 |
| SaqAI | TTAA | 2 cut(s) | 162, 292 |
| Sau3AI | GATC | 1 cut(s) | 196 |
| Sau96I | GGNCC | 1 cut(s) | 181 |
| SchI | GAGTC | 2 cut(s) | 77, 139 |
| SetI | ASST | 3 cut(s) | 174, 186, 253 |
| SgeI | CNNG | 9 cut(s) | 89, 139, 146, 190, 212, 229, 238, 260, 287 |
| SinI | GGWCC | 1 cut(s) | 181 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 81 |
| Sse9I | AATT | 2 cut(s) | 52, 289 |
| SspI | AATATT | 1 cut(s) | 282 |
| SspMI | CTAG | 1 cut(s) | 134 |
| TasI | AATT | 2 cut(s) | 52, 289 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TfiI | GAWTC | 1 cut(s) | 89 |
| Tru1I | TTAA | 2 cut(s) | 162, 292 |
| Tru9I | TTAA | 2 cut(s) | 162, 292 |
| TseFI | GTSAC | 1 cut(s) | 151 |
| Tsp45I | GTSAC | 1 cut(s) | 151 |
| TspDTI | ATGAA | 7 cut(s) | 44, 57, 93, 99, 126, 132, 205 |
| VpaK11BI | GGWCC | 1 cut(s) | 181 |
| XapI | RAATTY | 1 cut(s) | 52 |
| XbaI | TCTAGA | 1 cut(s) | 133 |
| XspI | CTAG | 1 cut(s) | 134 |