A Receptor for Ubiquitination Targets
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g06511 FvH4_3g36980 FvH4_4g08883 FvH4_6g17112 FvH4_6g38731 FvH4_6g40891 FvH4_6g40892 |
| malus_domestica | MD05G1324200.v1.1 |
| rosa_laevigata | RLG00000020915 |
| rosa_multiflora | Rmu_sc0005392.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00093010 |
| rosa_rugosa | Rorug02G0453200 |
| rosa_samantha | Rh2AG519600 Rh2BG531900 Rh2CG504600 Rh2DG540800 Rh2DG540900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 449 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 138 |
| AccIII | TCCGGA | 1 cut(s) | 364 |
| AcuI | CTGAAG | 1 cut(s) | 84 |
| AfaI | GTAC | 2 cut(s) | 143, 341 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 138 |
| AgsI | TTSAA | 3 cut(s) | 80, 215, 295 |
| AhlI | ACTAGT | 1 cut(s) | 469 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 287, 319 |
| AluBI | AGCT | 1 cut(s) | 280 |
| AluI | AGCT | 1 cut(s) | 280 |
| Aor13HI | TCCGGA | 1 cut(s) | 364 |
| ApeKI | GCWGC | 1 cut(s) | 321 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 149, 181 |
| AspS9I | GGNCC | 1 cut(s) | 157 |
| AvaII | GGWCC | 1 cut(s) | 157 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 57, 89 |
| BbvI | GCAGC | 1 cut(s) | 308 |
| BcuI | ACTAGT | 1 cut(s) | 469 |
| BfaI | CTAG | 3 cut(s) | 99, 350, 470 |
| BisI | GCNGC | 1 cut(s) | 322 |
| BlsI | GCNGC | 1 cut(s) | 323 |
| Bme18I | GGWCC | 1 cut(s) | 157 |
| BmgT120I | GGNCC | 1 cut(s) | 157 |
| BmiI | GGNNCC | 1 cut(s) | 159 |
| BoxI | GACNNNNGTC | 1 cut(s) | 22 |
| BsaWI | WCCGGW | 1 cut(s) | 364 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 109, 139 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 138 |
| Bse3DI | GCAATG | 1 cut(s) | 413 |
| BseAI | TCCGGA | 1 cut(s) | 364 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 138 |
| BseMI | GCAATG | 1 cut(s) | 413 |
| BseXI | GCAGC | 1 cut(s) | 308 |
| BsgI | GTGCAG | 1 cut(s) | 307 |
| BsiSI | CCGG | 1 cut(s) | 365 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 138 |
| Bsp13I | TCCGGA | 1 cut(s) | 364 |
| Bsp143I | GATC | 2 cut(s) | 5, 29 |
| BspEI | TCCGGA | 1 cut(s) | 364 |
| BspLI | GGNNCC | 1 cut(s) | 159 |
| BsrDI | GCAATG | 1 cut(s) | 413 |
| BssMI | GATC | 2 cut(s) | 5, 29 |
| Bst4CI | ACNGT | 3 cut(s) | 24, 245, 328 |
| BstC8I | GCNNGC | 1 cut(s) | 333 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 2 cut(s) | 8, 32 |
| BstMBI | GATC | 2 cut(s) | 5, 29 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 22 |
| BstV1I | GCAGC | 1 cut(s) | 308 |
| Cac8I | GCNNGC | 1 cut(s) | 333 |
| Cfr13I | GGNCC | 1 cut(s) | 157 |
| Csp6I | GTAC | 2 cut(s) | 142, 340 |
| CviJI | RGCY | 1 cut(s) | 280 |
| CviKI_1 | RGCY | 1 cut(s) | 280 |
| CviQI | GTAC | 2 cut(s) | 142, 340 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 2 cut(s) | 7, 31 |
| DpnII | GATC | 2 cut(s) | 5, 29 |
| Eco47I | GGWCC | 1 cut(s) | 157 |
| Eco57I | CTGAAG | 1 cut(s) | 84 |
| FaiI | YATR | 7 cut(s) | 184, 240, 269, 394, 396, 449, 481 |
| Fnu4HI | GCNGC | 1 cut(s) | 322 |
| Fsp4HI | GCNGC | 1 cut(s) | 322 |
| FspBI | CTAG | 3 cut(s) | 99, 350, 470 |
| GluI | GCNGC | 1 cut(s) | 322 |
| HapII | CCGG | 1 cut(s) | 365 |
| HincII | GTYRAC | 1 cut(s) | 43 |
| HindII | GTYRAC | 1 cut(s) | 43 |
| HindIII | AAGCTT | 1 cut(s) | 278 |
| HinfI | GANTC | 1 cut(s) | 93 |
| HpaII | CCGG | 1 cut(s) | 365 |
| Hpy166II | GTNNAC | 3 cut(s) | 43, 144, 439 |
| Hpy188I | TCNGA | 3 cut(s) | 117, 157, 285 |
| Hpy188III | TCNNGA | 2 cut(s) | 27, 365 |
| Hpy8I | GTNNAC | 3 cut(s) | 43, 144, 439 |
| Hpy99I | CGWCG | 2 cut(s) | 340, 406 |
| HpyAV | CCTTC | 1 cut(s) | 303 |
| HpyCH4III | ACNGT | 3 cut(s) | 24, 245, 328 |
| HpyCH4IV | ACGT | 1 cut(s) | 338 |
| HpyCH4V | TGCA | 3 cut(s) | 324, 387, 418 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| HpySE526I | ACGT | 1 cut(s) | 338 |
| Kpn2I | TCCGGA | 1 cut(s) | 364 |
| Kzo9I | GATC | 2 cut(s) | 5, 29 |
| LmnI | GCTCC | 1 cut(s) | 117 |
| LpnPI | CCDG | 4 cut(s) | 40, 75, 317, 378 |
| Lsp1109I | GCAGC | 1 cut(s) | 308 |
| MaeI | CTAG | 3 cut(s) | 99, 350, 470 |
| MaeII | ACGT | 1 cut(s) | 338 |
| MaeIII | GTNAC | 2 cut(s) | 101, 169 |
| MalI | GATC | 2 cut(s) | 7, 31 |
| MboI | GATC | 2 cut(s) | 5, 29 |
| MboII | GAAGA | 1 cut(s) | 77 |
| MlyI | GAGTC | 1 cut(s) | 87 |
| MnlI | CCTC | 2 cut(s) | 63, 197 |
| MroI | TCCGGA | 1 cut(s) | 364 |
| MspI | CCGG | 1 cut(s) | 365 |
| NdeII | GATC | 2 cut(s) | 5, 29 |
| NlaIV | GGNNCC | 1 cut(s) | 159 |
| NmuCI | GTSAC | 1 cut(s) | 169 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 332 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 138 |
| PkrI | GCNGC | 1 cut(s) | 323 |
| PleI | GAGTC | 1 cut(s) | 87 |
| PpsI | GAGTC | 1 cut(s) | 87 |
| PshAI | GACNNNNGTC | 1 cut(s) | 22 |
| PsiI | TTATAA | 1 cut(s) | 449 |
| PspN4I | GGNNCC | 1 cut(s) | 159 |
| PspPI | GGNCC | 1 cut(s) | 157 |
| RsaI | GTAC | 2 cut(s) | 143, 341 |
| RsaNI | GTAC | 2 cut(s) | 142, 340 |
| SatI | GCNGC | 1 cut(s) | 322 |
| Sau3AI | GATC | 2 cut(s) | 5, 29 |
| Sau96I | GGNCC | 1 cut(s) | 157 |
| SchI | GAGTC | 1 cut(s) | 87 |
| SetI | ASST | 6 cut(s) | 13, 42, 282, 341, 351, 410 |
| SinI | GGWCC | 1 cut(s) | 157 |
| SpeI | ACTAGT | 1 cut(s) | 469 |
| SspMI | CTAG | 3 cut(s) | 99, 350, 470 |
| TaaI | ACNGT | 3 cut(s) | 24, 245, 328 |
| TaiI | ACGT | 1 cut(s) | 341 |
| TaqI | TCGA | 1 cut(s) | 91 |
| TseFI | GTSAC | 1 cut(s) | 169 |
| TseI | GCWGC | 1 cut(s) | 321 |
| Tsp45I | GTSAC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 1 cut(s) | 215 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 138 |
| VpaK11BI | GGWCC | 1 cut(s) | 157 |
| XspI | CTAG | 3 cut(s) | 99, 350, 470 |