RNAse P Rpr2/Rpp21/SNM1 subunit domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G11560 AT4G11560 |
| fragaria_vesca | FvH4_4g24221 FvH4_4g36830 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 |
| malus_domestica | MD06G1082900.v1.1 MD14G1104300.v1.1 |
| prunus_persica | Prupe.5G100000_v2.0.a1 Prupe.5G100000_v2.0.a1 |
| pyrus_communis | pycom06g07970 pycom06g07980 pycom14g10050 |
| rosa_chinensis | RchiOBHm_Chr7g0197721 |
| rosa_laevigata | RLG00000003917 RLG00000015451 |
| rosa_multiflora | Rmu_sc0006732.1_g000010 Rmu_sc0029951.1_g000001 Rmu_sc0029952.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00258270 |
| rosa_rugosa | Rorug07G0042600 |
| rosa_samantha | Rh7AG166900 Rh7BG169000 Rh7CG175400 Rh7DG168700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 49 |
| AciI | CCGC | 1 cut(s) | 134 |
| AcuI | CTGAAG | 2 cut(s) | 12, 32 |
| AgsI | TTSAA | 5 cut(s) | 37, 115, 171, 185, 382 |
| AhlI | ACTAGT | 1 cut(s) | 374 |
| AluBI | AGCT | 1 cut(s) | 26 |
| AluI | AGCT | 1 cut(s) | 26 |
| Alw21I | GWGCWC | 1 cut(s) | 8 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 189 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| BbsI | GAAGAC | 1 cut(s) | 86 |
| Bbv12I | GWGCWC | 1 cut(s) | 8 |
| BcuI | ACTAGT | 1 cut(s) | 374 |
| BfaI | CTAG | 2 cut(s) | 150, 375 |
| BfuAI | ACCTGC | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 287 |
| BpiI | GAAGAC | 1 cut(s) | 86 |
| BsaJI | CCNNGG | 2 cut(s) | 219, 231 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 109, 139 |
| Bse1I | ACTGG | 2 cut(s) | 84, 124 |
| BseDI | CCNNGG | 2 cut(s) | 219, 231 |
| BseGI | GGATG | 1 cut(s) | 142 |
| BseMII | CTCAG | 1 cut(s) | 71 |
| BseNI | ACTGG | 2 cut(s) | 84, 124 |
| BseRI | GAGGAG | 1 cut(s) | 373 |
| BsgI | GTGCAG | 1 cut(s) | 108 |
| BsiHKAI | GWGCWC | 1 cut(s) | 8 |
| BslFI | GGGAC | 1 cut(s) | 192 |
| BsmFI | GGGAC | 1 cut(s) | 192 |
| Bsp1286I | GDGCHC | 1 cut(s) | 8 |
| Bsp143I | GATC | 1 cut(s) | 162 |
| Bsp19I | CCATGG | 2 cut(s) | 219, 231 |
| BspACI | CCGC | 1 cut(s) | 134 |
| BspCNI | CTCAG | 1 cut(s) | 70 |
| BspMI | ACCTGC | 1 cut(s) | 49 |
| BsrI | ACTGG | 2 cut(s) | 84, 124 |
| BssECI | CCNNGG | 2 cut(s) | 219, 231 |
| BssMI | GATC | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 2 cut(s) | 219, 231 |
| Bst4CI | ACNGT | 2 cut(s) | 199, 206 |
| Bst6I | CTCTTC | 2 cut(s) | 135, 180 |
| BstDEI | CTNAG | 1 cut(s) | 57 |
| BstDSI | CCRYGG | 2 cut(s) | 219, 231 |
| BstF5I | GGATG | 1 cut(s) | 142 |
| BstKTI | GATC | 1 cut(s) | 165 |
| BstMBI | GATC | 1 cut(s) | 162 |
| BstV2I | GAAGAC | 1 cut(s) | 86 |
| BtgI | CCRYGG | 2 cut(s) | 219, 231 |
| BtsCI | GGATG | 1 cut(s) | 142 |
| BtsIMutI | CAGTG | 1 cut(s) | 91 |
| BveI | ACCTGC | 1 cut(s) | 49 |
| CviAII | CATG | 3 cut(s) | 220, 232, 369 |
| CviJI | RGCY | 1 cut(s) | 26 |
| CviKI_1 | RGCY | 1 cut(s) | 26 |
| DdeI | CTNAG | 1 cut(s) | 57 |
| DpnI | GATC | 1 cut(s) | 164 |
| DpnII | GATC | 1 cut(s) | 162 |
| Eam1104I | CTCTTC | 2 cut(s) | 135, 180 |
| EarI | CTCTTC | 2 cut(s) | 135, 180 |
| Eco130I | CCWWGG | 2 cut(s) | 219, 231 |
| Eco57I | CTGAAG | 2 cut(s) | 12, 32 |
| EcoT14I | CCWWGG | 2 cut(s) | 219, 231 |
| ErhI | CCWWGG | 2 cut(s) | 219, 231 |
| FaeI | CATG | 3 cut(s) | 223, 235, 372 |
| FaiI | YATR | 4 cut(s) | 221, 233, 370, 446 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 177, 209 |
| FaqI | GGGAC | 1 cut(s) | 192 |
| FatI | CATG | 3 cut(s) | 219, 231, 368 |
| FokI | GGATG | 1 cut(s) | 149 |
| FspBI | CTAG | 2 cut(s) | 150, 375 |
| Hin1II | CATG | 3 cut(s) | 223, 235, 372 |
| HindIII | AAGCTT | 1 cut(s) | 24 |
| HinfI | GANTC | 3 cut(s) | 145, 190, 248 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy166II | GTNNAC | 1 cut(s) | 202 |
| Hpy188I | TCNGA | 2 cut(s) | 31, 60 |
| Hpy8I | GTNNAC | 1 cut(s) | 202 |
| HpyAV | CCTTC | 1 cut(s) | 376 |
| HpyCH4III | ACNGT | 2 cut(s) | 199, 206 |
| HpyCH4V | TGCA | 1 cut(s) | 89 |
| HpyF3I | CTNAG | 1 cut(s) | 57 |
| Hsp92II | CATG | 3 cut(s) | 223, 235, 372 |
| Kzo9I | GATC | 1 cut(s) | 162 |
| LmnI | GCTCC | 1 cut(s) | 11 |
| LpnPI | CCDG | 8 cut(s) | 23, 54, 97, 105, 306, 312, 324, 352 |
| LweI | GCATC | 1 cut(s) | 287 |
| MaeI | CTAG | 2 cut(s) | 150, 375 |
| MalI | GATC | 1 cut(s) | 164 |
| MboI | GATC | 1 cut(s) | 162 |
| MboII | GAAGA | 5 cut(s) | 25, 91, 152, 197, 421 |
| MhlI | GDGCHC | 1 cut(s) | 8 |
| MluCI | AATT | 2 cut(s) | 110, 432 |
| MlyI | GAGTC | 1 cut(s) | 242 |
| MmeI | TCCRAC | 2 cut(s) | 152, 225 |
| MnlI | CCTC | 2 cut(s) | 249, 351 |
| MroXI | GAANNNNTTC | 1 cut(s) | 189 |
| MseI | TTAA | 3 cut(s) | 99, 159, 317 |
| NcoI | CCATGG | 2 cut(s) | 219, 231 |
| NdeII | GATC | 1 cut(s) | 162 |
| NlaIII | CATG | 3 cut(s) | 223, 235, 372 |
| PdmI | GAANNNNTTC | 1 cut(s) | 189 |
| PfeI | GAWTC | 2 cut(s) | 145, 190 |
| PleI | GAGTC | 1 cut(s) | 242 |
| PpsI | GAGTC | 1 cut(s) | 242 |
| SaqAI | TTAA | 3 cut(s) | 99, 159, 317 |
| Sau3AI | GATC | 1 cut(s) | 162 |
| SchI | GAGTC | 1 cut(s) | 242 |
| SduI | GDGCHC | 1 cut(s) | 8 |
| SetI | ASST | 5 cut(s) | 28, 43, 105, 295, 301 |
| SfaNI | GCATC | 1 cut(s) | 287 |
| SpeI | ACTAGT | 1 cut(s) | 374 |
| Sse9I | AATT | 2 cut(s) | 110, 432 |
| SsiI | CCGC | 1 cut(s) | 134 |
| SspMI | CTAG | 2 cut(s) | 150, 375 |
| StyI | CCWWGG | 2 cut(s) | 219, 231 |
| TaaI | ACNGT | 2 cut(s) | 199, 206 |
| TasI | AATT | 2 cut(s) | 110, 432 |
| TfiI | GAWTC | 2 cut(s) | 145, 190 |
| Tru1I | TTAA | 3 cut(s) | 99, 159, 317 |
| Tru9I | TTAA | 3 cut(s) | 99, 159, 317 |
| TscAI | CASTG | 1 cut(s) | 91 |
| TspDTI | ATGAA | 2 cut(s) | 108, 153 |
| TspRI | CASTG | 1 cut(s) | 91 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 217 |
| XmnI | GAANNNNTTC | 1 cut(s) | 189 |
| XspI | CTAG | 2 cut(s) | 150, 375 |