Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005626

Physical Location & Seq

Genomic Coordinates Forward (+)

52576856 .. 52587200

Gene Structure 10345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00258270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1821 bp

ATGGGGAACAGGAGGTTCGCGCAGATCGCGACGAGCGACGACGAAGAGGACGACTTCGCGCGGCAGAGCCAGCAGTCGTCGGAGGAAGTTCCGGCGTCGACGAGGAAGAGGAAGCTGAAGAGAGTGGCGGAGGAGGAGGAGGAGGAGGAGAGGCGGAGGAGTAGGAAGAAGAAGAAAAAGGGAGAGGAAGAGGCCGAAACGGCGTCGGAGGGAGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGATGAGCTGGAAGCCAAGCCGATTGGGGAGATGGTTAAGATTTCCGGCAAGGGGAGGACTCGGAGGCATCATTACCAGGCTTTTGAGTATGATGGAAACCAATACGAGCTGGAGGATCCGGTTCTTCTAACGCCCTCTGATAGAAGAGAGAAGCCGTATGTGGCAATTATTAAGGATATCACTCAGCTCAAAGATGGGAACATGGTGGTGTTAGGGCAATGGTTTTATCGTCCTGAAGAGGCAGAGAAAAAAGGTGGTGGAAACTGGCAGTCACAAGACACAAGGGAGCTGTTCTATAGTTTTCATCGTGATGAGTGTCCAGCAGAATCTGTGATGCATAAATGTGTGGTTCATTTTGTTCCTTTACACAAGCAGCTGCCAAAGCGTAAAGAACATCCTGGATTCATTGTGCAAAAGGTGTATGACACCGATGGGAAGAAGCTTTGGAAGCTAACAGATAGAGACTATGAAGAAGATAAGCAGCATGAAATTGACTTACTAGTTCAGAAAACCATGCGAAGATTGGTAGATCTTCCTGATATTGAGATTGGAGATCCAACTACTAATCAGGATGATCAATTGAAGAGCAAAAGAAATTTGATCAAAAAGAATATAGCACCCCTTGATGTTTCTAGAGTGGAAGAAGCAACAACTAGGCCTGGTAAAAATCAAAAAGCTGAAACACCTGGAAGCTGTATGACTAATTCCTCGGAGTACCATCGTATTTTAGTTGAGCTCAATGCATTAACTGGAGACACACATCGTGACAAATGGTTGGAGAAACTTATAAGGGAGCTACAGTTCATATGCAGCTCTGCTGACAGCATGAATGGAGGTGGTAAAAGAAAATCTGGTTCTGATGAAACTGACTGTAAGTCCCCAGATGTTGCAAATGGACGTCAGGATACAAATCTCAAGGGCGGCAAGCCTTTTCACTGGCCAGATGATGCTGTCCGTGCAGCTACTGCTCTGGAGAAGGCCTCACATGATTCCCTCTCCTCTGATTACCAGAAGTATAACCAAAAATTGCGGTCATTGTCCTACAATCTCTCGAAACAAGTGGTGCTAGCCCGCCGTCTGCTAAGTGGAGAGTTAGAGCCTTCAACAATACTAAATATGTCACCAGATGAGTTAAAGGAGGGTTTAACAGCTGAGGAGAGAGCAATGAAGGAGCCTGATGAGTCAGAGCGTATGCAGATGACTGATGCACGTTGCACAAGATGTTCGGAGCTCAAAGTAGGAGTGAGAAACATCATTCAAGCAGGACATGGTGCTCGCTATGAGTTGGAGTGTACTGCCTGTGGTAATATGTGGTACGCCGCCCGAGATGCAGTTTCTATGCTTACTATTGACACACCAAGTTCAAACAAGAATGTTGGTACTGTTCCATTGGCCACTGCTAAATTTGAAGATGTTGAGAAGAAGCTGGTCAGTCCCCGTGAATCTGACAAGACAGCAGCTCCCGAAACTATAAAAAAGACTACTGAAGCATATATGCCCGTCTTAGAGGCACAAAGATCATTTGGTAAGTCCAAAAGGGAAGAAAACTCTGAATCTGCAAAGAATGCTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH DUF3527 TFIIS_M

Protein Analysis

606

Amino Acids

69.11

Weight (kDa)

5.48

Isoelectric Point (pI)

62.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	116 - 233	3.4e-20	BAH domain
TFIIS_M	PF07500	332 - 473	1.8e-14	Transcription factor S-II (TFIIS), central domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11560 AT4G11560
fragaria_vesca	FvH4_4g24221 FvH4_4g36830 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390
malus_domestica	MD06G1082900.v1.1 MD14G1104300.v1.1
prunus_persica	Prupe.5G100000_v2.0.a1 Prupe.5G100000_v2.0.a1
pyrus_communis	pycom06g07970 pycom06g07980 pycom14g10050
rosa_chinensis	RchiOBHm_Chr7g0197721
rosa_laevigata	RLG00000003917 RLG00000015451
rosa_multiflora	Rmu_sc0006732.1_g000010 Rmu_sc0029951.1_g000001 Rmu_sc0029952.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258270
rosa_rugosa	Rorug07G0042600
rosa_samantha	Rh7AG166900 Rh7BG169000 Rh7CG175400 Rh7DG168700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1034
AatII	GACGTC	1 cut(s)	1147
AccI	GTMKAC	1 cut(s)	98
AccII	CGCG	4 cut(s)	20, 29, 59, 61
AciI	CCGC	7 cut(s)	61, 128, 154, 1167, 1276, 1318, 1566
AclWI	GGATC	3 cut(s)	356, 369, 794
AcoI	YGGCCR	2 cut(s)	1184, 1638
AcsI	RAATTY	2 cut(s)	841, 1649
AcuI	CTGAAG	3 cut(s)	137, 501, 1752
AcyI	GRCGYC	3 cut(s)	95, 203, 1144
AdeI	CACNNNGTG	1 cut(s)	1010
AfaI	GTAC	4 cut(s)	962, 1540, 1562, 1627
AfiI	CCNNNNNNNGG	1 cut(s)	297
AgsI	TTSAA	5 cut(s)	829, 1350, 1505, 1611, 1655
AhdI	GACNNNNNGTC	1 cut(s)	1120
AhlI	ACTAGT	1 cut(s)	745
AjnI	CCWGG	4 cut(s)	321, 643, 904, 931
AloI	GAACNNNNNNTCC	2 cut(s)	1031, 1063
Alw21I	GWGCWC	3 cut(s)	984, 1479, 1522
Alw26I	GTCTC	2 cut(s)	702, 993
AlwI	GGATC	3 cut(s)	356, 369, 794
AlwNI	CAGNNNCTG	2 cut(s)	575, 1211
Ama87I	CYCGRG	1 cut(s)	1569
AoxI	GGCC	5 cut(s)	192, 902, 1184, 1224, 1638
ApeKI	GCWGC	6 cut(s)	619, 622, 727, 1056, 1205, 1703
ApoI	RAATTY	2 cut(s)	841, 1649
AspLEI	GCGC	2 cut(s)	22, 61
AsuHPI	GGTGA	1 cut(s)	1359
AsuNHI	GCTAGC	1 cut(s)	1312
AvaI	CYCGRG	1 cut(s)	1569
BalI	TGGCCA	2 cut(s)	1186, 1640
BamHI	GGATCC	1 cut(s)	361
BanII	GRGCYC	2 cut(s)	984, 1479
Bbv12I	GWGCWC	3 cut(s)	984, 1479, 1522
BbvCI	CCTCAGC	1 cut(s)	1398
BbvI	GCAGC	6 cut(s)	609, 631, 739, 1068, 1217, 1715
BccI	CCATC	5 cut(s)	271, 332, 434, 671, 972
BceAI	ACGGC	3 cut(s)	216, 385, 1305
BciT130I	CCWGG	4 cut(s)	323, 645, 906, 933
BciVI	GTATCC	1 cut(s)	1144
BclI	TGATCA	2 cut(s)	820, 846
BcoDI	GTCTC	2 cut(s)	702, 993
BcuI	ACTAGT	1 cut(s)	745
BfaI	CTAG	4 cut(s)	746, 879, 900, 1313
BfmI	CTRYAG	2 cut(s)	541, 1043
BfuI	GTATCC	1 cut(s)	1144
BglI	GCCNNNNNGGC	1 cut(s)	200
BglII	AGATCT	1 cut(s)	775
BisI	GCNGC	9 cut(s)	62, 620, 623, 728, 1057, 1168, 1206, 1566, 1704
BlsI	GCNGC	9 cut(s)	63, 621, 624, 729, 1058, 1169, 1207, 1567, 1705
Bme1390I	CCNGG	4 cut(s)	323, 645, 906, 933
BmeRI	GACNNNNNGTC	1 cut(s)	1120
BmeT110I	CYCGRG	1 cut(s)	1569
BmiI	GGNNCC	2 cut(s)	363, 1419
BmrFI	CCNGG	4 cut(s)	323, 645, 906, 933
BmsI	GCATC	5 cut(s)	322, 570, 1183, 1441, 1564
BmtI	GCTAGC	1 cut(s)	1316
BplI	GAGNNNNNCTC	2 cut(s)	1211, 1243
BpmI	CTGGAG	3 cut(s)	377, 1017, 1238
Bpu10I	CCTNAGC	1 cut(s)	1398
BpuEI	CTTGAG	1 cut(s)	1145
BsaBI	GATNNNNATC	1 cut(s)	1155
BsaHI	GRCGYC	3 cut(s)	95, 203, 1144
BsaJI	CCNNGG	1 cut(s)	954
BsaWI	WCCGGW	1 cut(s)	364
BsaXI	ACNNNNNCTCC	4 cut(s)	1031, 1061, 1690, 1720
Bsc4I	CCNNNNNNNGG	1 cut(s)	297
Bse1I	ACTGG	3 cut(s)	515, 1000, 1187
Bse3DI	GCAATG	2 cut(s)	470, 1416
Bse8I	GATNNNNATC	1 cut(s)	1155
BseBI	CCWGG	4 cut(s)	323, 645, 906, 933
BseDI	CCNNGG	1 cut(s)	954
BseGI	GGATG	3 cut(s)	253, 640, 823
BseJI	GATNNNNATC	1 cut(s)	1155
BseLI	CCNNNNNNNGG	1 cut(s)	297
BseMI	GCAATG	2 cut(s)	470, 1416
BseMII	CTCAG	3 cut(s)	443, 1389, 1806
BseNI	ACTGG	3 cut(s)	515, 1000, 1187
BseXI	GCAGC	6 cut(s)	609, 631, 739, 1068, 1217, 1715
BsgI	GTGCAG	1 cut(s)	1224
Bsh1236I	CGCG	4 cut(s)	20, 29, 59, 61
BshFI	GGCC	5 cut(s)	194, 904, 1186, 1226, 1640
BsiHKAI	GWGCWC	3 cut(s)	984, 1479, 1522
BsiHKCI	CYCGRG	1 cut(s)	1569
BsiSI	CCGG	3 cut(s)	92, 291, 365
BslFI	GGGAC	2 cut(s)	1108, 1665
BslI	CCNNNNNNNGG	1 cut(s)	297
BsmAI	GTCTC	2 cut(s)	702, 993
BsmFI	GGGAC	2 cut(s)	1108, 1665
BsmI	GAATGC	1 cut(s)	1816
BsnI	GGCC	5 cut(s)	194, 904, 1186, 1226, 1640
BsoBI	CYCGRG	1 cut(s)	1569
Bsp1286I	GDGCHC	3 cut(s)	984, 1479, 1522
Bsp143I	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
Bsp68I	TCGCGA	1 cut(s)	29
BspACI	CCGC	7 cut(s)	61, 128, 154, 1167, 1276, 1318, 1566
BspANI	GGCC	5 cut(s)	194, 904, 1186, 1226, 1640
BspCNI	CTCAG	3 cut(s)	442, 1390, 1807
BspFNI	CGCG	4 cut(s)	20, 29, 59, 61
BspLI	GGNNCC	2 cut(s)	363, 1419
BspOI	GCTAGC	1 cut(s)	1316
BspPI	GGATC	3 cut(s)	356, 369, 794
BspQI	GCTCTTC	1 cut(s)	824
BsrDI	GCAATG	2 cut(s)	470, 1416
BsrI	ACTGG	3 cut(s)	515, 1000, 1187
BssECI	CCNNGG	1 cut(s)	954
BssMI	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
BssNI	GRCGYC	3 cut(s)	95, 203, 1144
Bst2UI	CCWGG	4 cut(s)	323, 645, 906, 933
Bst4CI	ACNGT	3 cut(s)	1047, 1118, 1630
Bst6I	CTCTTC	9 cut(s)	39, 101, 113, 183, 210, 222, 385, 477, 824
BstACI	GRCGYC	3 cut(s)	95, 203, 1144
BstAPI	GCANNNNNTGC	2 cut(s)	1211, 1811
BstC8I	GCNNGC	5 cut(s)	71, 1172, 1314, 1318, 1522
BstDEI	CTNAG	5 cut(s)	429, 1328, 1398, 1750, 1815
BstF5I	GGATG	3 cut(s)	253, 640, 823
BstFNI	CGCG	4 cut(s)	20, 29, 59, 61
BstHHI	GCGC	2 cut(s)	22, 61
BstKTI	GATC	7 cut(s)	27, 364, 778, 802, 823, 849, 1766
BstMAI	GTCTC	2 cut(s)	702, 993
BstMBI	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
BstMWI	GCNNNNNNNGC	9 cut(s)	26, 70, 200, 628, 694, 1202, 1211, 1574, 1811
BstNI	CCWGG	4 cut(s)	323, 645, 906, 933
BstSCI	CCNGG	4 cut(s)	321, 643, 904, 931
BstSFI	CTRYAG	2 cut(s)	541, 1043
BstUI	CGCG	4 cut(s)	20, 29, 59, 61
BstV1I	GCAGC	6 cut(s)	609, 631, 739, 1068, 1217, 1715
BstX2I	RGATCY	3 cut(s)	361, 775, 799
BstYI	RGATCY	3 cut(s)	361, 775, 799
BsuI	GTATCC	1 cut(s)	1144
BsuRI	GGCC	5 cut(s)	194, 904, 1186, 1226, 1640
BtsCI	GGATG	3 cut(s)	253, 640, 823
BtsI	GCAGTG	1 cut(s)	1641
BtsIMutI	CAGTG	2 cut(s)	1180, 1641
BtuMI	TCGCGA	1 cut(s)	29
Cac8I	GCNNGC	5 cut(s)	71, 1172, 1314, 1318, 1522
CaiI	CAGNNNCTG	2 cut(s)	575, 1211
CfoI	GCGC	2 cut(s)	22, 61
CseI	GACGC	2 cut(s)	84, 192
Csp6I	GTAC	4 cut(s)	961, 1539, 1561, 1626
CviAII	CATG	6 cut(s)	448, 731, 760, 1072, 1232, 1514
CviQI	GTAC	4 cut(s)	961, 1539, 1561, 1626
DdeI	CTNAG	5 cut(s)	429, 1328, 1398, 1750, 1815
DpnI	GATC	7 cut(s)	26, 363, 777, 801, 822, 848, 1765
DpnII	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
DraIII	CACNNNGTG	1 cut(s)	1010
DriI	GACNNNNNGTC	1 cut(s)	1120
EaeI	YGGCCR	2 cut(s)	1184, 1638
Eam1104I	CTCTTC	9 cut(s)	39, 101, 113, 183, 210, 222, 385, 477, 824
Eam1105I	GACNNNNNGTC	1 cut(s)	1120
EarI	CTCTTC	9 cut(s)	39, 101, 113, 183, 210, 222, 385, 477, 824
EciI	GGCGGA	2 cut(s)	143, 169
Ecl136II	GAGCTC	2 cut(s)	982, 1477
Eco147I	AGGCCT	2 cut(s)	904, 1226
Eco24I	GRGCYC	2 cut(s)	984, 1479
Eco32I	GATATC	1 cut(s)	424
Eco53kI	GAGCTC	2 cut(s)	982, 1477
Eco57I	CTGAAG	3 cut(s)	137, 501, 1752
Eco88I	CYCGRG	1 cut(s)	1569
EcoICRI	GAGCTC	2 cut(s)	982, 1477
EcoRII	CCWGG	4 cut(s)	321, 643, 904, 931
EcoRV	GATATC	1 cut(s)	424
EcoT22I	ATGCAT	2 cut(s)	585, 991
EcoT38I	GRGCYC	2 cut(s)	984, 1479
FaeI	CATG	6 cut(s)	451, 734, 763, 1075, 1235, 1517
FaqI	GGGAC	2 cut(s)	1108, 1665
FatI	CATG	6 cut(s)	447, 730, 759, 1071, 1231, 1513
FauI	CCCGC	1 cut(s)	1325
FauNDI	CATATG	1 cut(s)	1052
FbaI	TGATCA	2 cut(s)	820, 846
FblI	GTMKAC	1 cut(s)	98
Fnu4HI	GCNGC	9 cut(s)	62, 620, 623, 728, 1057, 1168, 1206, 1566, 1704
FokI	GGATG	3 cut(s)	260, 627, 830
FriOI	GRGCYC	2 cut(s)	984, 1479
Fsp4HI	GCNGC	9 cut(s)	62, 620, 623, 728, 1057, 1168, 1206, 1566, 1704
FspBI	CTAG	4 cut(s)	746, 879, 900, 1313
GlaI	GCGC	2 cut(s)	21, 60
GluI	GCNGC	9 cut(s)	62, 620, 623, 728, 1057, 1168, 1206, 1566, 1704
GsuI	CTGGAG	3 cut(s)	377, 1017, 1238
HaeIII	GGCC	5 cut(s)	194, 904, 1186, 1226, 1640
HapII	CCGG	3 cut(s)	92, 291, 365
HgaI	GACGC	2 cut(s)	84, 192
HhaI	GCGC	2 cut(s)	22, 61
Hin1I	GRCGYC	3 cut(s)	95, 203, 1144
Hin1II	CATG	6 cut(s)	451, 734, 763, 1075, 1235, 1517
Hin6I	GCGC	2 cut(s)	20, 59
HinP1I	GCGC	2 cut(s)	20, 59
HincII	GTYRAC	1 cut(s)	99
HindII	GTYRAC	1 cut(s)	99
HindIII	AAGCTT	1 cut(s)	686
HinfI	GANTC	7 cut(s)	304, 572, 648, 1235, 1427, 1688, 1799
HpaII	CCGG	3 cut(s)	92, 291, 365
HphI	GGTGA	1 cut(s)	1359
Hpy166II	GTNNAC	2 cut(s)	99, 1539
Hpy8I	GTNNAC	2 cut(s)	99, 1539
Hpy99I	CGWCG	7 cut(s)	34, 41, 44, 82, 100, 103, 208
HpyAV	CCTTC	3 cut(s)	1216, 1356, 1408
HpyCH4III	ACNGT	3 cut(s)	1047, 1118, 1630
HpyCH4IV	ACGT	2 cut(s)	1144, 1456
HpyF10VI	GCNNNNNNNGC	9 cut(s)	26, 70, 200, 628, 694, 1202, 1211, 1574, 1811
HpyF3I	CTNAG	5 cut(s)	429, 1328, 1398, 1750, 1815
HpySE526I	ACGT	2 cut(s)	1144, 1456
Hsp92I	GRCGYC	3 cut(s)	95, 203, 1144
Hsp92II	CATG	6 cut(s)	451, 734, 763, 1075, 1235, 1517
HspAI	GCGC	2 cut(s)	20, 59
Ksp22I	TGATCA	2 cut(s)	820, 846
Kzo9I	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
LguI	GCTCTTC	1 cut(s)	824
LmnI	GCTCC	5 cut(s)	532, 1039, 1417, 1474, 1711
Lsp1109I	GCAGC	6 cut(s)	609, 631, 739, 1068, 1217, 1715
LweI	GCATC	5 cut(s)	322, 570, 1183, 1441, 1564
MaeI	CTAG	4 cut(s)	746, 879, 900, 1313
MaeII	ACGT	2 cut(s)	1144, 1456
MaeIII	GTNAC	3 cut(s)	516, 1010, 1365
MalI	GATC	7 cut(s)	26, 363, 777, 801, 822, 848, 1765
MboI	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
MfeI	CAATTG	1 cut(s)	824
MflI	RGATCY	3 cut(s)	361, 775, 799
MhlI	GDGCHC	3 cut(s)	984, 1479, 1522
MlsI	TGGCCA	2 cut(s)	1186, 1640
MluCI	AATT	7 cut(s)	411, 735, 824, 841, 949, 1271, 1649
MluNI	TGGCCA	2 cut(s)	1186, 1640
MlyI	GAGTC	2 cut(s)	298, 1436
MmeI	TCCRAC	5 cut(s)	60, 186, 827, 1002, 1512
Mox20I	TGGCCA	2 cut(s)	1186, 1640
Mph1103I	ATGCAT	2 cut(s)	585, 991
MscI	TGGCCA	2 cut(s)	1186, 1640
MseI	TTAA	5 cut(s)	282, 417, 992, 1379, 1391
MslI	CAYNNNNRTG	3 cut(s)	452, 555, 588
Msp20I	TGGCCA	2 cut(s)	1186, 1640
MspA1I	CMGCKG	2 cut(s)	622, 1397
MspI	CCGG	3 cut(s)	92, 291, 365
MspR9I	CCNGG	4 cut(s)	323, 645, 906, 933
MunI	CAATTG	1 cut(s)	824
Mva1269I	GAATGC	1 cut(s)	1816
MvaI	CCWGG	4 cut(s)	323, 645, 906, 933
MvnI	CGCG	4 cut(s)	20, 29, 59, 61
MwoI	GCNNNNNNNGC	9 cut(s)	26, 70, 200, 628, 694, 1202, 1211, 1574, 1811
NdeI	CATATG	1 cut(s)	1052
NdeII	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
NheI	GCTAGC	1 cut(s)	1312
NlaIII	CATG	6 cut(s)	451, 734, 763, 1075, 1235, 1517
NlaIV	GGNNCC	2 cut(s)	363, 1419
NmuCI	GTSAC	3 cut(s)	516, 1010, 1365
NruI	TCGCGA	1 cut(s)	29
NsiI	ATGCAT	2 cut(s)	585, 991
PceI	AGGCCT	2 cut(s)	904, 1226
PciSI	GCTCTTC	1 cut(s)	824
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 48
PctI	GAATGC	1 cut(s)	1816
PfeI	GAWTC	5 cut(s)	572, 648, 1235, 1688, 1799
PfoI	TCCNGGA	1 cut(s)	643
PkrI	GCNGC	9 cut(s)	63, 621, 624, 729, 1058, 1169, 1207, 1567, 1705
PleI	GAGTC	2 cut(s)	298, 1435
PpsI	GAGTC	2 cut(s)	298, 1435
PsiI	TTATAA	1 cut(s)	1034
Psp124BI	GAGCTC	2 cut(s)	984, 1479
Psp6I	CCWGG	4 cut(s)	321, 643, 904, 931
PspGI	CCWGG	4 cut(s)	321, 643, 904, 931
PspN4I	GGNNCC	2 cut(s)	363, 1419
PstNI	CAGNNNCTG	2 cut(s)	575, 1211
PsuI	RGATCY	3 cut(s)	361, 775, 799
PvuII	CAGCTG	2 cut(s)	622, 1397
RruI	TCGCGA	1 cut(s)	29
RsaI	GTAC	4 cut(s)	962, 1540, 1562, 1627
RsaNI	GTAC	4 cut(s)	961, 1539, 1561, 1626
RseI	CAYNNNNRTG	3 cut(s)	452, 555, 588
SacI	GAGCTC	2 cut(s)	984, 1479
SalI	GTCGAC	1 cut(s)	97
SapI	GCTCTTC	1 cut(s)	824
SaqAI	TTAA	5 cut(s)	282, 417, 992, 1379, 1391
SatI	GCNGC	9 cut(s)	62, 620, 623, 728, 1057, 1168, 1206, 1566, 1704
Sau3AI	GATC	7 cut(s)	24, 361, 775, 799, 820, 846, 1763
SchI	GAGTC	2 cut(s)	298, 1436
ScrFI	CCNGG	4 cut(s)	323, 645, 906, 933
SduI	GDGCHC	3 cut(s)	984, 1479, 1522
SfaNI	GCATC	5 cut(s)	322, 570, 1183, 1441, 1564
SfcI	CTRYAG	2 cut(s)	541, 1043
SgrDI	CGTCGACG	1 cut(s)	97
SmiMI	CAYNNNNRTG	3 cut(s)	452, 555, 588
SmlI	CTYRAG	1 cut(s)	1160
SmoI	CTYRAG	1 cut(s)	1160
SpeI	ACTAGT	1 cut(s)	745
Sse9I	AATT	7 cut(s)	411, 735, 824, 841, 949, 1271, 1649
SseBI	AGGCCT	2 cut(s)	904, 1226
SsiI	CCGC	7 cut(s)	61, 128, 154, 1167, 1276, 1318, 1566
SspMI	CTAG	4 cut(s)	746, 879, 900, 1313
SstI	GAGCTC	2 cut(s)	984, 1479
StuI	AGGCCT	2 cut(s)	904, 1226
StyD4I	CCNGG	4 cut(s)	321, 643, 904, 931
TaaI	ACNGT	3 cut(s)	1047, 1118, 1630
TaiI	ACGT	2 cut(s)	1147, 1459
TaqI	TCGA	2 cut(s)	98, 1298
TasI	AATT	7 cut(s)	411, 735, 824, 841, 949, 1271, 1649
TatI	WGTACW	1 cut(s)	1538
TauI	GCSGC	3 cut(s)	64, 1170, 1568
TfiI	GAWTC	5 cut(s)	572, 648, 1235, 1688, 1799
Tru1I	TTAA	5 cut(s)	282, 417, 992, 1379, 1391
Tru9I	TTAA	5 cut(s)	282, 417, 992, 1379, 1391
TscAI	CASTG	2 cut(s)	1187, 1648
TseFI	GTSAC	3 cut(s)	516, 1010, 1365
TseI	GCWGC	6 cut(s)	619, 622, 727, 1056, 1205, 1703
Tsp45I	GTSAC	3 cut(s)	516, 1010, 1365
TspDTI	ATGAA	9 cut(s)	539, 587, 640, 729, 747, 1039, 1088, 1122, 1427
TspGWI	ACGGA	1 cut(s)	1190
TspRI	CASTG	2 cut(s)	1187, 1648
XapI	RAATTY	2 cut(s)	841, 1649
XbaI	TCTAGA	1 cut(s)	878
XcmI	CCANNNNNNNNNTGG	1 cut(s)	766
XmiI	GTMKAC	1 cut(s)	98
XspI	CTAG	4 cut(s)	746, 879, 900, 1313
ZraI	GACGTC	1 cut(s)	1145
Zsp2I	ATGCAT	2 cut(s)	585, 991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.