Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005626

Physical Location & Seq

Genomic Coordinates Forward (+)

54270994 .. 54276852

Gene Structure 5859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003917

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGGGGAACAGGAGGTTCGCGCAGATCGCGACGAGCGACGACGAAGAGGACGACTACGCGCGGCAGAGCCAGCAGTCGTCGGAGGAAGTTCCGGCGTCGACGAGGAAGAGGAAGCTGAAGAGAGTGGCGGAGGAGGAAGAGGAGGAGGAGGAGGCGGAGAGGCGGAGGAGTAGGAAGAAGAAGAAGAAGAAGAAGGGGGAGGAAGAGGCCGAAACGGCGTCGGAGGGAGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGATGAGCTGGAAGCCAAGCCGATTGGGCAGATGGTTAAGATTTCCGGCAAGGGGAGAACTCGGAGGCATCATTACCAGGCTTTTGAGTATGATGGAAACCAATACGAGCTGGAGGATCCGGTTCTTCTAACGCCCTCTGATAGAAGAGAGAAGCCTTATGTGGCAATTATTAAGGATATCACTCAGCTCAAAGATGGGAACATGGTGGTGTTAGGGCAATGGTTTTATCGTCCTGAAGAGGCAGAGAAAAAAGGTGGTGGAAACTGGCAGTCACAAGACACAAGGGAGCTGTTCTATAGTTTTCATCGTGATGAGTGTCCAGCAGAATCTGTGATGCATAAATGTGTGGTTCATTTTGTTCCTTTACACAAGCAGCTGCCAAAGCGTAAAGAGCACCCTGGATTCATTGTGCAAAAGGTGTATGACACCGATGGGAAAAAGCTTTGGAAGCTAACAGATAGAGACTATGAAGAAGATAAGCAGCATGAAATTGACTTACTAGTTCAGAAAACCATGCGAAGATTGGTAGATCTTCCTGATATTGAGATTGGAGATCCAACTACTAATCAGGATGATCAATTGAAGAGCAAAAGAAATTTGATTAAAAAGAATATAGCACCCCTTGATGTTTCTAGAGTGGAAGAAGCAACAACTAGGCCTGGTAAAAATCAAAAAGCTGAAACACCTGGAAGCTGTATGACTAATTCCTCAGAGTACCATCGTATTTTAGTTGAGCTCAATGCATTAACTGGAGACACACATCGTGACAAATGGTTGGAGAAACTTATAAAAGAGCTACAGTTTCTATGCAGTTCTGCTGACAGCATGATCGGAGGTGATAAAAGAAAATCTGGTTCTGATGAAACTGACTGTAAGTCCCCAGATGTTGCAAATGGACGTCAGGATACAAATCTCAAGGGCGGCAAGCCTTTTCACTGGCCAGATGATGCTGTCCGTGCAGCTACTGCTCTGGAGAAGGCCTCACATGATTCCCTCTCCTCAGATTACCAGAAGTATAACCAAAAATTGCGGTCATTGTCCTACAATCTCTCGAAACAAGTGGTGCTAGCCCGCCGTCTGCTAAGTGGAGAGTTAGAGCCTTCAACAATACTAAATATGTCACCAGATGAGTTAAAGGAGGGTTTAACAGCTGAGGAGAGAGCAATGAAGGAGCCTGATGAGTCAGAGCGTATGCAGATGACTGATGCGCGTTGCACAAGATGCTCGGAGCTCAAAGTAGGAGTGAGAAACATCATTCAAGCAGGACATGGTGCTCGCTATGAGTTGGAGTGTAGTGCCTGTGGTAATATGTGGTACGCCGCTCGAGATGCAGTTTCTATGCTTACTATTGACACACCAAGTTCAAACAAGAATGTTGGTACTGTTCCATTGGCCACTGCTAAATTTGAAGATGTTGAGAAGAAGCTGGTCAGTCCCCGTGAATCTGACAAGACAGCAGCTCCCGAAACTATAAAAAAGACTACTGAAGCATATATGCCCGTCCTAGAGGCACAAAGATCATTTGGTAAGTCTAAAAGGGAAGAAAACTCTGAATCTGCAAAGAATGCTGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH DUF3527 TFIIS_M

Protein Analysis

613

Amino Acids

69.86

Weight (kDa)

5.45

Isoelectric Point (pI)

63.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAH	PF01426	122 - 239	3.4e-20	BAH domain
TFIIS_M	PF07500	338 - 479	1.2e-14	Transcription factor S-II (TFIIS), central domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005626)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11560 AT4G11560
fragaria_vesca	FvH4_4g24221 FvH4_4g36830 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390 FvH4_5g02390
malus_domestica	MD06G1082900.v1.1 MD14G1104300.v1.1
prunus_persica	Prupe.5G100000_v2.0.a1 Prupe.5G100000_v2.0.a1
pyrus_communis	pycom06g07970 pycom06g07980 pycom14g10050
rosa_chinensis	RchiOBHm_Chr7g0197721
rosa_laevigata	RLG00000003917 RLG00000015451
rosa_multiflora	Rmu_sc0006732.1_g000010 Rmu_sc0029951.1_g000001 Rmu_sc0029952.1_g000001
rosa_roxburghii	Rroxscaffold_3G00258270
rosa_rugosa	Rorug07G0042600
rosa_samantha	Rh7AG166900 Rh7BG169000 Rh7CG175400 Rh7DG168700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1052
AatII	GACGTC	1 cut(s)	1165
AccBSI	CCGCTC	1 cut(s)	1586
AccI	GTMKAC	1 cut(s)	98
AccII	CGCG	5 cut(s)	20, 29, 59, 61, 1474
AciI	CCGC	8 cut(s)	61, 128, 155, 163, 1185, 1294, 1336, 1584
AclWI	GGATC	3 cut(s)	374, 387, 812
AcoI	YGGCCR	2 cut(s)	1202, 1656
AcsI	RAATTY	2 cut(s)	859, 1667
AcuI	CTGAAG	3 cut(s)	137, 519, 1770
AcyI	GRCGYC	3 cut(s)	95, 218, 1162
AdeI	CACNNNGTG	1 cut(s)	1028
AfaI	GTAC	3 cut(s)	980, 1580, 1645
AfiI	CCNNNNNNNGG	1 cut(s)	315
AgsI	TTSAA	5 cut(s)	847, 1368, 1523, 1629, 1673
AhdI	GACNNNNNGTC	1 cut(s)	1138
AhlI	ACTAGT	1 cut(s)	763
AjnI	CCWGG	4 cut(s)	339, 661, 922, 949
Alw21I	GWGCWC	4 cut(s)	660, 1002, 1497, 1540
Alw26I	GTCTC	2 cut(s)	720, 1011
AlwI	GGATC	3 cut(s)	374, 387, 812
AlwNI	CAGNNNCTG	2 cut(s)	593, 1229
Ama87I	CYCGRG	1 cut(s)	1587
AoxI	GGCC	5 cut(s)	207, 920, 1202, 1242, 1656
ApeKI	GCWGC	5 cut(s)	637, 640, 745, 1223, 1721
ApoI	RAATTY	2 cut(s)	859, 1667
AspLEI	GCGC	3 cut(s)	22, 61, 1474
AsuHPI	GGTGA	2 cut(s)	1112, 1377
AsuNHI	GCTAGC	1 cut(s)	1330
AvaI	CYCGRG	1 cut(s)	1587
BalI	TGGCCA	2 cut(s)	1204, 1658
BamHI	GGATCC	1 cut(s)	379
BanII	GRGCYC	2 cut(s)	1002, 1497
Bbv12I	GWGCWC	4 cut(s)	660, 1002, 1497, 1540
BbvCI	CCTCAGC	1 cut(s)	1416
BbvI	GCAGC	5 cut(s)	627, 649, 757, 1235, 1733
BccI	CCATC	5 cut(s)	289, 350, 452, 689, 990
BceAI	ACGGC	2 cut(s)	231, 1323
BciT130I	CCWGG	4 cut(s)	341, 663, 924, 951
BciVI	GTATCC	1 cut(s)	1162
BclI	TGATCA	1 cut(s)	838
BcoDI	GTCTC	2 cut(s)	720, 1011
BcuI	ACTAGT	1 cut(s)	763
BfaI	CTAG	5 cut(s)	764, 897, 918, 1331, 1769
BfmI	CTRYAG	2 cut(s)	559, 1061
BfuI	GTATCC	1 cut(s)	1162
BglI	GCCNNNNNGGC	2 cut(s)	215, 289
BglII	AGATCT	1 cut(s)	793
BisI	GCNGC	8 cut(s)	62, 638, 641, 746, 1186, 1224, 1584, 1722
BlsI	GCNGC	8 cut(s)	63, 639, 642, 747, 1187, 1225, 1585, 1723
Bme1390I	CCNGG	4 cut(s)	341, 663, 924, 951
BmeRI	GACNNNNNGTC	1 cut(s)	1138
BmeT110I	CYCGRG	1 cut(s)	1587
BmiI	GGNNCC	2 cut(s)	381, 1437
BmrFI	CCNGG	4 cut(s)	341, 663, 924, 951
BmsI	GCATC	6 cut(s)	340, 588, 1201, 1459, 1475, 1582
BmtI	GCTAGC	1 cut(s)	1334
BplI	GAGNNNNNCTC	2 cut(s)	1229, 1261
BpmI	CTGGAG	3 cut(s)	395, 1035, 1256
Bpu10I	CCTNAGC	1 cut(s)	1416
BpuEI	CTTGAG	1 cut(s)	1163
BsaBI	GATNNNNATC	1 cut(s)	1173
BsaHI	GRCGYC	3 cut(s)	95, 218, 1162
BsaJI	CCNNGG	1 cut(s)	661
BsaWI	WCCGGW	1 cut(s)	382
BsaXI	ACNNNNNCTCC	2 cut(s)	1708, 1738
Bsc4I	CCNNNNNNNGG	1 cut(s)	315
Bse1I	ACTGG	3 cut(s)	533, 1018, 1205
Bse3DI	GCAATG	2 cut(s)	488, 1434
Bse8I	GATNNNNATC	1 cut(s)	1173
BseBI	CCWGG	4 cut(s)	341, 663, 924, 951
BseDI	CCNNGG	1 cut(s)	661
BseGI	GGATG	2 cut(s)	271, 841
BseJI	GATNNNNATC	1 cut(s)	1173
BseLI	CCNNNNNNNGG	1 cut(s)	315
BseMI	GCAATG	2 cut(s)	488, 1434
BseMII	CTCAG	5 cut(s)	461, 987, 1278, 1407, 1824
BseNI	ACTGG	3 cut(s)	533, 1018, 1205
BseXI	GCAGC	5 cut(s)	627, 649, 757, 1235, 1733
BsgI	GTGCAG	1 cut(s)	1242
Bsh1236I	CGCG	5 cut(s)	20, 29, 59, 61, 1474
BshFI	GGCC	5 cut(s)	209, 922, 1204, 1244, 1658
BsiHKAI	GWGCWC	4 cut(s)	660, 1002, 1497, 1540
BsiHKCI	CYCGRG	1 cut(s)	1587
BsiSI	CCGG	3 cut(s)	92, 309, 383
BslFI	GGGAC	2 cut(s)	1126, 1683
BslI	CCNNNNNNNGG	1 cut(s)	315
BsmAI	GTCTC	2 cut(s)	720, 1011
BsmFI	GGGAC	2 cut(s)	1126, 1683
BsmI	GAATGC	1 cut(s)	1834
BsnI	GGCC	5 cut(s)	209, 922, 1204, 1244, 1658
BsoBI	CYCGRG	1 cut(s)	1587
Bsp1286I	GDGCHC	4 cut(s)	660, 1002, 1497, 1540
Bsp143I	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
Bsp68I	TCGCGA	1 cut(s)	29
BspACI	CCGC	8 cut(s)	61, 128, 155, 163, 1185, 1294, 1336, 1584
BspANI	GGCC	5 cut(s)	209, 922, 1204, 1244, 1658
BspCNI	CTCAG	5 cut(s)	460, 986, 1277, 1408, 1825
BspFNI	CGCG	5 cut(s)	20, 29, 59, 61, 1474
BspLI	GGNNCC	2 cut(s)	381, 1437
BspOI	GCTAGC	1 cut(s)	1334
BspPI	GGATC	3 cut(s)	374, 387, 812
BspQI	GCTCTTC	1 cut(s)	842
BsrBI	CCGCTC	1 cut(s)	1586
BsrDI	GCAATG	2 cut(s)	488, 1434
BsrI	ACTGG	3 cut(s)	533, 1018, 1205
BssECI	CCNNGG	1 cut(s)	661
BssMI	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
BssNI	GRCGYC	3 cut(s)	95, 218, 1162
Bst2UI	CCWGG	4 cut(s)	341, 663, 924, 951
Bst4CI	ACNGT	3 cut(s)	1065, 1136, 1648
BstACI	GRCGYC	3 cut(s)	95, 218, 1162
BstAPI	GCANNNNNTGC	3 cut(s)	1229, 1485, 1829
BstC8I	GCNNGC	5 cut(s)	71, 1190, 1332, 1336, 1540
BstDEI	CTNAG	6 cut(s)	447, 973, 1264, 1346, 1416, 1833
BstF5I	GGATG	2 cut(s)	271, 841
BstFNI	CGCG	5 cut(s)	20, 29, 59, 61, 1474
BstHHI	GCGC	3 cut(s)	22, 61, 1474
BstKTI	GATC	7 cut(s)	27, 382, 796, 820, 841, 1095, 1784
BstMAI	GTCTC	2 cut(s)	720, 1011
BstMBI	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
BstNI	CCWGG	4 cut(s)	341, 663, 924, 951
BstSCI	CCNGG	4 cut(s)	339, 661, 922, 949
BstSFI	CTRYAG	2 cut(s)	559, 1061
BstUI	CGCG	5 cut(s)	20, 29, 59, 61, 1474
BstV1I	GCAGC	5 cut(s)	627, 649, 757, 1235, 1733
BstX2I	RGATCY	3 cut(s)	379, 793, 817
BstYI	RGATCY	3 cut(s)	379, 793, 817
BsuI	GTATCC	1 cut(s)	1162
BsuRI	GGCC	5 cut(s)	209, 922, 1204, 1244, 1658
BtsCI	GGATG	2 cut(s)	271, 841
BtsI	GCAGTG	1 cut(s)	1659
BtsIMutI	CAGTG	2 cut(s)	1198, 1659
BtuMI	TCGCGA	1 cut(s)	29
Cac8I	GCNNGC	5 cut(s)	71, 1190, 1332, 1336, 1540
CaiI	CAGNNNCTG	2 cut(s)	593, 1229
CfoI	GCGC	3 cut(s)	22, 61, 1474
CseI	GACGC	2 cut(s)	84, 207
Csp6I	GTAC	3 cut(s)	979, 1579, 1644
CviAII	CATG	6 cut(s)	466, 749, 778, 1090, 1250, 1532
CviQI	GTAC	3 cut(s)	979, 1579, 1644
DdeI	CTNAG	6 cut(s)	447, 973, 1264, 1346, 1416, 1833
DpnI	GATC	7 cut(s)	26, 381, 795, 819, 840, 1094, 1783
DpnII	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
DraIII	CACNNNGTG	1 cut(s)	1028
DriI	GACNNNNNGTC	1 cut(s)	1138
EaeI	YGGCCR	2 cut(s)	1202, 1656
Eam1105I	GACNNNNNGTC	1 cut(s)	1138
EciI	GGCGGA	3 cut(s)	143, 170, 178
Ecl136II	GAGCTC	2 cut(s)	1000, 1495
Eco147I	AGGCCT	2 cut(s)	922, 1244
Eco24I	GRGCYC	2 cut(s)	1002, 1497
Eco32I	GATATC	1 cut(s)	442
Eco53kI	GAGCTC	2 cut(s)	1000, 1495
Eco57I	CTGAAG	3 cut(s)	137, 519, 1770
Eco88I	CYCGRG	1 cut(s)	1587
EcoICRI	GAGCTC	2 cut(s)	1000, 1495
EcoRII	CCWGG	4 cut(s)	339, 661, 922, 949
EcoRV	GATATC	1 cut(s)	442
EcoT22I	ATGCAT	2 cut(s)	603, 1009
EcoT38I	GRGCYC	2 cut(s)	1002, 1497
FaeI	CATG	6 cut(s)	469, 752, 781, 1093, 1253, 1535
FaqI	GGGAC	2 cut(s)	1126, 1683
FatI	CATG	6 cut(s)	465, 748, 777, 1089, 1249, 1531
FauI	CCCGC	1 cut(s)	1343
FbaI	TGATCA	1 cut(s)	838
FblI	GTMKAC	1 cut(s)	98
Fnu4HI	GCNGC	8 cut(s)	62, 638, 641, 746, 1186, 1224, 1584, 1722
FokI	GGATG	2 cut(s)	278, 848
FriOI	GRGCYC	2 cut(s)	1002, 1497
Fsp4HI	GCNGC	8 cut(s)	62, 638, 641, 746, 1186, 1224, 1584, 1722
FspBI	CTAG	5 cut(s)	764, 897, 918, 1331, 1769
GlaI	GCGC	3 cut(s)	21, 60, 1473
GluI	GCNGC	8 cut(s)	62, 638, 641, 746, 1186, 1224, 1584, 1722
GsuI	CTGGAG	3 cut(s)	395, 1035, 1256
HaeIII	GGCC	5 cut(s)	209, 922, 1204, 1244, 1658
HapII	CCGG	3 cut(s)	92, 309, 383
HgaI	GACGC	2 cut(s)	84, 207
HhaI	GCGC	3 cut(s)	22, 61, 1474
Hin1I	GRCGYC	3 cut(s)	95, 218, 1162
Hin1II	CATG	6 cut(s)	469, 752, 781, 1093, 1253, 1535
Hin6I	GCGC	3 cut(s)	20, 59, 1472
HinP1I	GCGC	3 cut(s)	20, 59, 1472
HincII	GTYRAC	1 cut(s)	99
HindII	GTYRAC	1 cut(s)	99
HindIII	AAGCTT	1 cut(s)	704
HinfI	GANTC	6 cut(s)	590, 666, 1253, 1445, 1706, 1817
HpaII	CCGG	3 cut(s)	92, 309, 383
HphI	GGTGA	2 cut(s)	1112, 1377
Hpy166II	GTNNAC	1 cut(s)	99
Hpy8I	GTNNAC	1 cut(s)	99
Hpy99I	CGWCG	7 cut(s)	34, 41, 44, 82, 100, 103, 223
HpyAV	CCTTC	4 cut(s)	187, 1234, 1374, 1426
HpyCH4III	ACNGT	3 cut(s)	1065, 1136, 1648
HpyCH4IV	ACGT	1 cut(s)	1162
HpyF3I	CTNAG	6 cut(s)	447, 973, 1264, 1346, 1416, 1833
HpySE526I	ACGT	1 cut(s)	1162
Hsp92I	GRCGYC	3 cut(s)	95, 218, 1162
Hsp92II	CATG	6 cut(s)	469, 752, 781, 1093, 1253, 1535
HspAI	GCGC	3 cut(s)	20, 59, 1472
Ksp22I	TGATCA	1 cut(s)	838
Kzo9I	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
LguI	GCTCTTC	1 cut(s)	842
LmnI	GCTCC	4 cut(s)	550, 1435, 1492, 1729
Lsp1109I	GCAGC	5 cut(s)	627, 649, 757, 1235, 1733
LweI	GCATC	6 cut(s)	340, 588, 1201, 1459, 1475, 1582
MaeI	CTAG	5 cut(s)	764, 897, 918, 1331, 1769
MaeII	ACGT	1 cut(s)	1162
MaeIII	GTNAC	3 cut(s)	534, 1028, 1383
MalI	GATC	7 cut(s)	26, 381, 795, 819, 840, 1094, 1783
MbiI	CCGCTC	1 cut(s)	1586
MboI	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
MfeI	CAATTG	1 cut(s)	842
MflI	RGATCY	3 cut(s)	379, 793, 817
MhlI	GDGCHC	4 cut(s)	660, 1002, 1497, 1540
MlsI	TGGCCA	2 cut(s)	1204, 1658
MluCI	AATT	7 cut(s)	429, 753, 842, 859, 967, 1289, 1667
MluNI	TGGCCA	2 cut(s)	1204, 1658
MlyI	GAGTC	1 cut(s)	1454
MmeI	TCCRAC	5 cut(s)	60, 201, 845, 1020, 1530
Mox20I	TGGCCA	2 cut(s)	1204, 1658
Mph1103I	ATGCAT	2 cut(s)	603, 1009
MscI	TGGCCA	2 cut(s)	1204, 1658
MseI	TTAA	6 cut(s)	300, 435, 867, 1010, 1397, 1409
MslI	CAYNNNNRTG	3 cut(s)	470, 573, 606
Msp20I	TGGCCA	2 cut(s)	1204, 1658
MspA1I	CMGCKG	2 cut(s)	640, 1415
MspI	CCGG	3 cut(s)	92, 309, 383
MspR9I	CCNGG	4 cut(s)	341, 663, 924, 951
MunI	CAATTG	1 cut(s)	842
Mva1269I	GAATGC	1 cut(s)	1834
MvaI	CCWGG	4 cut(s)	341, 663, 924, 951
MvnI	CGCG	5 cut(s)	20, 29, 59, 61, 1474
NdeII	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
NheI	GCTAGC	1 cut(s)	1330
NlaIII	CATG	6 cut(s)	469, 752, 781, 1093, 1253, 1535
NlaIV	GGNNCC	2 cut(s)	381, 1437
NmuCI	GTSAC	3 cut(s)	534, 1028, 1383
NruI	TCGCGA	1 cut(s)	29
NsiI	ATGCAT	2 cut(s)	603, 1009
PaeR7I	CTCGAG	1 cut(s)	1587
PceI	AGGCCT	2 cut(s)	922, 1244
PciSI	GCTCTTC	1 cut(s)	842
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 48
PctI	GAATGC	1 cut(s)	1834
PfeI	GAWTC	5 cut(s)	590, 666, 1253, 1706, 1817
PkrI	GCNGC	8 cut(s)	63, 639, 642, 747, 1187, 1225, 1585, 1723
PleI	GAGTC	1 cut(s)	1453
PpsI	GAGTC	1 cut(s)	1453
PsiI	TTATAA	1 cut(s)	1052
Psp124BI	GAGCTC	2 cut(s)	1002, 1497
Psp6I	CCWGG	4 cut(s)	339, 661, 922, 949
PspGI	CCWGG	4 cut(s)	339, 661, 922, 949
PspN4I	GGNNCC	2 cut(s)	381, 1437
PstNI	CAGNNNCTG	2 cut(s)	593, 1229
PsuI	RGATCY	3 cut(s)	379, 793, 817
PvuII	CAGCTG	2 cut(s)	640, 1415
RruI	TCGCGA	1 cut(s)	29
RsaI	GTAC	3 cut(s)	980, 1580, 1645
RsaNI	GTAC	3 cut(s)	979, 1579, 1644
RseI	CAYNNNNRTG	3 cut(s)	470, 573, 606
SacI	GAGCTC	2 cut(s)	1002, 1497
SalI	GTCGAC	1 cut(s)	97
SapI	GCTCTTC	1 cut(s)	842
SaqAI	TTAA	6 cut(s)	300, 435, 867, 1010, 1397, 1409
SatI	GCNGC	8 cut(s)	62, 638, 641, 746, 1186, 1224, 1584, 1722
Sau3AI	GATC	7 cut(s)	24, 379, 793, 817, 838, 1092, 1781
SchI	GAGTC	1 cut(s)	1454
ScrFI	CCNGG	4 cut(s)	341, 663, 924, 951
SduI	GDGCHC	4 cut(s)	660, 1002, 1497, 1540
SfaNI	GCATC	6 cut(s)	340, 588, 1201, 1459, 1475, 1582
SfcI	CTRYAG	2 cut(s)	559, 1061
Sfr274I	CTCGAG	1 cut(s)	1587
SgrDI	CGTCGACG	1 cut(s)	97
SlaI	CTCGAG	1 cut(s)	1587
SmiMI	CAYNNNNRTG	3 cut(s)	470, 573, 606
SmlI	CTYRAG	2 cut(s)	1178, 1587
SmoI	CTYRAG	2 cut(s)	1178, 1587
SpeI	ACTAGT	1 cut(s)	763
Sse9I	AATT	7 cut(s)	429, 753, 842, 859, 967, 1289, 1667
SseBI	AGGCCT	2 cut(s)	922, 1244
SsiI	CCGC	8 cut(s)	61, 128, 155, 163, 1185, 1294, 1336, 1584
SspMI	CTAG	5 cut(s)	764, 897, 918, 1331, 1769
SstI	GAGCTC	2 cut(s)	1002, 1497
StuI	AGGCCT	2 cut(s)	922, 1244
StyD4I	CCNGG	4 cut(s)	339, 661, 922, 949
TaaI	ACNGT	3 cut(s)	1065, 1136, 1648
TaiI	ACGT	1 cut(s)	1165
TaqI	TCGA	3 cut(s)	98, 1316, 1588
TasI	AATT	7 cut(s)	429, 753, 842, 859, 967, 1289, 1667
TauI	GCSGC	3 cut(s)	64, 1188, 1586
TfiI	GAWTC	5 cut(s)	590, 666, 1253, 1706, 1817
Tru1I	TTAA	6 cut(s)	300, 435, 867, 1010, 1397, 1409
Tru9I	TTAA	6 cut(s)	300, 435, 867, 1010, 1397, 1409
TscAI	CASTG	2 cut(s)	1205, 1666
TseFI	GTSAC	3 cut(s)	534, 1028, 1383
TseI	GCWGC	5 cut(s)	637, 640, 745, 1223, 1721
Tsp45I	GTSAC	3 cut(s)	534, 1028, 1383
TspDTI	ATGAA	7 cut(s)	557, 605, 658, 747, 765, 1140, 1445
TspGWI	ACGGA	1 cut(s)	1208
TspRI	CASTG	2 cut(s)	1205, 1666
XapI	RAATTY	2 cut(s)	859, 1667
XbaI	TCTAGA	1 cut(s)	896
XcmI	CCANNNNNNNNNTGG	1 cut(s)	784
XhoI	CTCGAG	1 cut(s)	1587
XmiI	GTMKAC	1 cut(s)	98
XspI	CTAG	5 cut(s)	764, 897, 918, 1331, 1769
ZraI	GACGTC	1 cut(s)	1163
Zsp2I	ATGCAT	2 cut(s)	603, 1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.