Rh7AG166900

bromo-adjacent homology (BAH) domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
14263653 .. 14267447
3795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG166900.1

Sequence Viewer

Length: 1494 bp
ATGTTTTTTCTGCATGTGATTACTCTGCAGGAGGATCCGGTTCTTCTAACGCCCTCTGATAGAAGAGAGAAGCCTTATGTGGCAATTATTAAGGATATCACTCAGCTCAAAGATGGGAACATGGTGGTGTTAGGGCAATGGTTTTATCGTCCTGAAGAGGCAGAGAAAAAAGGGGGTGGAAACTGGCAGTCACAAGACACAAGGGAGCTGTTCTATAGTTTTCATCGTGATGAGTGTCCAGCAGAATCTGTGATGCATAAATGTGTGGTTCATTTTGTTCCTTTACACAAGCAGCTGCCAAAGCGTAAAGAGCATCCTGGATTCATTGTGCAAAAGGTGTATGACACCGATGGGAAGAAGCTTTGGAAGCTAACAGATAGAGACTATGAAGAAGATAAGCAGCATGAAATTGACTTACTAGTTCAGAAAACCATGCGAAGATTGGTAGATCTTCCTGATATTGAGATTGGAGATCCAACTACTAATCAGGATGATCAATTGAAGAGCAAAAGAAATTTGATTAAAAAGAATATAGCACCCCTTGATGTTTCCAGAGTGGAAGAAGCAACAACTAGGCCTGGTAAAAATCAAAAAGCTGAAACACCTGGAAGCTGTATGAGTAATTCCTCAGAGTACCATCGTATTTTAGTTGAGCTCAATGCATTAACTGGAGACACACATCGTGACAAATGGTTGGAGAAGCTTATAAAAGAGCTACAGTTCATATGCAGTTCTACTGACAGCATGAACGGAGGTGATAAAAGAAAATATGGTTCTGATGAAACTGACTGTAAGTCCCCAGATGTTGCAAATGGACGTCAGGATACAAATCTCAAGGGCGGCAAGCCTTTTCACTGGCCAGATGATGCTGTCCGTGCAGCTACTGCTCTGGAGAAGGCCTCACATGATTCCCTCTCCTCCGATTACCAGAAGTATAACCAAAAATTGCGGTCATTGTCCTACAATCTCTCGAAACAAGTGGTGCTAGCCCGCCGTCTGCTAAGTGGAGAGTTAGAGCCTTCAACTATACTAAATATGTCACCAGATGAGTTAAAGGAGGGTTTAACAGCTGAGGAGAGAGCAATGAAGGAGCCTGATGAGTCAGAGCGTATGCAGATGACTGATGCGCGTTGCACAAGATGTTCGGAGCTCAAAGTAGGAGTGAGAAACATCATTCAAGCAGGACATGGTGCTCGCTATGAGTTGGAGTGTACTGCCTGTGGTAATATGTGGTACGCGGCTCGAGATGCAGTTTCTATGCTTACTATTGACACACCAAGTTCAAACAAGAATGTTGGTACTGTTCCATTGGCCACTGCTAAATTTGAAGATGTTGAGAAGAAGCTGGTCAGTCCCCGTGAATCTGACAAGACAGCAGCTCCCGAAGCTATAAAAAAGACTACTGAAGCATATATGCCCATCTTAGAGGCACAAAGATCATTTGGTAAGTCTAAAAGGGAAGAAAACTCTGAATCTGCAAAGAATGCTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

497

Amino Acids

56.41

Weight (kDa)

6.25

Isoelectric Point (pI)

51.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAH PF01426 11 - 124 3.1e-19 BAH domain
TFIIS_M PF07500 223 - 364 6.1e-15 Transcription factor S-II (TFIIS), central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 707
AatII GACGTC 1 cut(s) 820
AccII CGCG 2 cut(s) 1129, 1238
AciI CCGC 4 cut(s) 840, 949, 991, 1238
AclWI GGATC 3 cut(s) 29, 42, 467
AcoI YGGCCR 2 cut(s) 857, 1311
AcsI RAATTY 2 cut(s) 514, 1322
AcuI CTGAAG 2 cut(s) 174, 1425
AcyI GRCGYC 1 cut(s) 817
AdeI CACNNNGTG 1 cut(s) 683
AfaI GTAC 4 cut(s) 635, 1213, 1235, 1300
AgsI TTSAA 5 cut(s) 502, 1023, 1178, 1284, 1328
AhdI GACNNNNNGTC 1 cut(s) 793
AhlI ACTAGT 1 cut(s) 418
AjnI CCWGG 3 cut(s) 316, 577, 604
Alw21I GWGCWC 3 cut(s) 657, 1152, 1195
Alw26I GTCTC 2 cut(s) 375, 666
AlwI GGATC 3 cut(s) 29, 42, 467
AlwNI CAGNNNCTG 2 cut(s) 248, 884
Ama87I CYCGRG 1 cut(s) 1242
AoxI GGCC 4 cut(s) 575, 857, 897, 1311
ApeKI GCWGC 5 cut(s) 292, 295, 400, 878, 1376
ApoI RAATTY 2 cut(s) 514, 1322
AspLEI GCGC 1 cut(s) 1129
AsuHPI GGTGA 2 cut(s) 767, 1032
AsuNHI GCTAGC 1 cut(s) 985
AvaI CYCGRG 1 cut(s) 1242
BalI TGGCCA 2 cut(s) 859, 1313
BamHI GGATCC 1 cut(s) 34
BanII GRGCYC 2 cut(s) 657, 1152
Bbv12I GWGCWC 3 cut(s) 657, 1152, 1195
BbvCI CCTCAGC 1 cut(s) 1071
BbvI GCAGC 5 cut(s) 282, 304, 412, 890, 1388
BccI CCATC 4 cut(s) 107, 344, 645, 1427
BceAI ACGGC 1 cut(s) 978
BciT130I CCWGG 3 cut(s) 318, 579, 606
BciVI GTATCC 1 cut(s) 817
BclI TGATCA 1 cut(s) 493
BcoDI GTCTC 2 cut(s) 375, 666
BcuI ACTAGT 1 cut(s) 418
BfaI CTAG 3 cut(s) 419, 573, 986
BfmI CTRYAG 3 cut(s) 26, 214, 716
BfuI GTATCC 1 cut(s) 817
BglII AGATCT 1 cut(s) 448
BisI GCNGC 7 cut(s) 293, 296, 401, 841, 879, 1239, 1377
BlsI GCNGC 7 cut(s) 294, 297, 402, 842, 880, 1240, 1378
Bme1390I CCNGG 3 cut(s) 318, 579, 606
BmeRI GACNNNNNGTC 1 cut(s) 793
BmeT110I CYCGRG 1 cut(s) 1242
BmiI GGNNCC 2 cut(s) 36, 1092
BmrFI CCNGG 3 cut(s) 318, 579, 606
BmsI GCATC 5 cut(s) 243, 322, 856, 1114, 1237
BmtI GCTAGC 1 cut(s) 989
BplI GAGNNNNNCTC 2 cut(s) 884, 916
BpmI CTGGAG 2 cut(s) 690, 911
Bpu10I CCTNAGC 1 cut(s) 1071
BpuEI CTTGAG 1 cut(s) 818
BsaBI GATNNNNATC 1 cut(s) 828
BsaHI GRCGYC 1 cut(s) 817
BsaWI WCCGGW 1 cut(s) 37
BsaXI ACNNNNNCTCC 2 cut(s) 1363, 1393
Bse1I ACTGG 3 cut(s) 188, 673, 860
Bse3DI GCAATG 2 cut(s) 143, 1089
Bse8I GATNNNNATC 1 cut(s) 828
BseBI CCWGG 3 cut(s) 318, 579, 606
BseGI GGATG 2 cut(s) 313, 496
BseJI GATNNNNATC 1 cut(s) 828
BseMI GCAATG 2 cut(s) 143, 1089
BseMII CTCAG 4 cut(s) 116, 642, 1062, 1479
BseNI ACTGG 3 cut(s) 188, 673, 860
BseRI GAGGAG 2 cut(s) 907, 1088
BseXI GCAGC 5 cut(s) 282, 304, 412, 890, 1388
BsgI GTGCAG 1 cut(s) 897
Bsh1236I CGCG 2 cut(s) 1129, 1238
BshFI GGCC 4 cut(s) 577, 859, 899, 1313
BsiHKAI GWGCWC 3 cut(s) 657, 1152, 1195
BsiHKCI CYCGRG 1 cut(s) 1242
BsiSI CCGG 1 cut(s) 38
BslFI GGGAC 2 cut(s) 781, 1338
BsmAI GTCTC 2 cut(s) 375, 666
BsmFI GGGAC 2 cut(s) 781, 1338
BsmI GAATGC 1 cut(s) 1489
BsnI GGCC 4 cut(s) 577, 859, 899, 1313
BsoBI CYCGRG 1 cut(s) 1242
Bsp1286I GDGCHC 3 cut(s) 657, 1152, 1195
Bsp143I GATC 5 cut(s) 34, 448, 472, 493, 1436
BspACI CCGC 4 cut(s) 840, 949, 991, 1238
BspANI GGCC 4 cut(s) 577, 859, 899, 1313
BspCNI CTCAG 4 cut(s) 115, 641, 1063, 1480
BspFNI CGCG 2 cut(s) 1129, 1238
BspLI GGNNCC 2 cut(s) 36, 1092
BspMAI CTGCAG 1 cut(s) 30
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 3 cut(s) 29, 42, 467
BspQI GCTCTTC 1 cut(s) 497
BsrDI GCAATG 2 cut(s) 143, 1089
BsrI ACTGG 3 cut(s) 188, 673, 860
BssMI GATC 5 cut(s) 34, 448, 472, 493, 1436
BssNI GRCGYC 1 cut(s) 817
Bst2UI CCWGG 3 cut(s) 318, 579, 606
Bst4CI ACNGT 3 cut(s) 720, 791, 1303
Bst6I CTCTTC 3 cut(s) 58, 150, 497
BstACI GRCGYC 1 cut(s) 817
BstAPI GCANNNNNTGC 2 cut(s) 884, 1484
BstC8I GCNNGC 4 cut(s) 845, 987, 991, 1195
BstDEI CTNAG 6 cut(s) 102, 628, 1001, 1071, 1423, 1488
BstF5I GGATG 2 cut(s) 313, 496
BstFNI CGCG 2 cut(s) 1129, 1238
BstHHI GCGC 1 cut(s) 1129
BstKTI GATC 5 cut(s) 37, 451, 475, 496, 1439
BstMAI GTCTC 2 cut(s) 375, 666
BstMBI GATC 5 cut(s) 34, 448, 472, 493, 1436
BstMWI GCNNNNNNNGC 8 cut(s) 301, 310, 367, 875, 884, 1247, 1385, 1484
BstNI CCWGG 3 cut(s) 318, 579, 606
BstNSI RCATGY 1 cut(s) 17
BstSCI CCNGG 3 cut(s) 316, 577, 604
BstSFI CTRYAG 3 cut(s) 26, 214, 716
BstUI CGCG 2 cut(s) 1129, 1238
BstV1I GCAGC 5 cut(s) 282, 304, 412, 890, 1388
BstX2I RGATCY 3 cut(s) 34, 448, 472
BstYI RGATCY 3 cut(s) 34, 448, 472
BsuI GTATCC 1 cut(s) 817
BsuRI GGCC 4 cut(s) 577, 859, 899, 1313
BtsCI GGATG 2 cut(s) 313, 496
BtsI GCAGTG 1 cut(s) 1314
BtsIMutI CAGTG 2 cut(s) 853, 1314
Cac8I GCNNGC 4 cut(s) 845, 987, 991, 1195
CaiI CAGNNNCTG 2 cut(s) 248, 884
CfoI GCGC 1 cut(s) 1129
Csp6I GTAC 4 cut(s) 634, 1212, 1234, 1299
CviAII CATG 7 cut(s) 14, 121, 404, 433, 745, 905, 1187
CviQI GTAC 4 cut(s) 634, 1212, 1234, 1299
DdeI CTNAG 6 cut(s) 102, 628, 1001, 1071, 1423, 1488
DpnI GATC 5 cut(s) 36, 450, 474, 495, 1438
DpnII GATC 5 cut(s) 34, 448, 472, 493, 1436
DraIII CACNNNGTG 1 cut(s) 683
DriI GACNNNNNGTC 1 cut(s) 793
EaeI YGGCCR 2 cut(s) 857, 1311
Eam1104I CTCTTC 3 cut(s) 58, 150, 497
Eam1105I GACNNNNNGTC 1 cut(s) 793
EarI CTCTTC 3 cut(s) 58, 150, 497
Ecl136II GAGCTC 2 cut(s) 655, 1150
Eco147I AGGCCT 2 cut(s) 577, 899
Eco24I GRGCYC 2 cut(s) 657, 1152
Eco32I GATATC 1 cut(s) 97
Eco53kI GAGCTC 2 cut(s) 655, 1150
Eco57I CTGAAG 2 cut(s) 174, 1425
Eco88I CYCGRG 1 cut(s) 1242
EcoICRI GAGCTC 2 cut(s) 655, 1150
EcoRII CCWGG 3 cut(s) 316, 577, 604
EcoRV GATATC 1 cut(s) 97
EcoT22I ATGCAT 2 cut(s) 258, 664
EcoT38I GRGCYC 2 cut(s) 657, 1152
FaeI CATG 7 cut(s) 17, 124, 407, 436, 748, 908, 1190
FaqI GGGAC 2 cut(s) 781, 1338
FatI CATG 7 cut(s) 13, 120, 403, 432, 744, 904, 1186
FauI CCCGC 1 cut(s) 998
FauNDI CATATG 1 cut(s) 725
FbaI TGATCA 1 cut(s) 493
Fnu4HI GCNGC 7 cut(s) 293, 296, 401, 841, 879, 1239, 1377
FokI GGATG 2 cut(s) 300, 503
FriOI GRGCYC 2 cut(s) 657, 1152
Fsp4HI GCNGC 7 cut(s) 293, 296, 401, 841, 879, 1239, 1377
FspBI CTAG 3 cut(s) 419, 573, 986
GlaI GCGC 1 cut(s) 1128
GluI GCNGC 7 cut(s) 293, 296, 401, 841, 879, 1239, 1377
GsuI CTGGAG 2 cut(s) 690, 911
HaeIII GGCC 4 cut(s) 577, 859, 899, 1313
HapII CCGG 1 cut(s) 38
HhaI GCGC 1 cut(s) 1129
Hin1I GRCGYC 1 cut(s) 817
Hin1II CATG 7 cut(s) 17, 124, 407, 436, 748, 908, 1190
Hin6I GCGC 1 cut(s) 1127
HinP1I GCGC 1 cut(s) 1127
HindIII AAGCTT 2 cut(s) 359, 701
HinfI GANTC 6 cut(s) 245, 321, 908, 1100, 1361, 1472
HpaII CCGG 1 cut(s) 38
HphI GGTGA 2 cut(s) 767, 1032
Hpy166II GTNNAC 1 cut(s) 1212
Hpy188I TCNGA 9 cut(s) 58, 426, 631, 778, 922, 1105, 1147, 1366, 1471
Hpy8I GTNNAC 1 cut(s) 1212
HpyAV CCTTC 3 cut(s) 889, 1029, 1081
HpyCH4III ACNGT 3 cut(s) 720, 791, 1303
HpyCH4IV ACGT 1 cut(s) 817
HpyF10VI GCNNNNNNNGC 8 cut(s) 301, 310, 367, 875, 884, 1247, 1385, 1484
HpyF3I CTNAG 6 cut(s) 102, 628, 1001, 1071, 1423, 1488
HpySE526I ACGT 1 cut(s) 817
Hsp92I GRCGYC 1 cut(s) 817
Hsp92II CATG 7 cut(s) 17, 124, 407, 436, 748, 908, 1190
HspAI GCGC 1 cut(s) 1127
Ksp22I TGATCA 1 cut(s) 493
Kzo9I GATC 5 cut(s) 34, 448, 472, 493, 1436
LguI GCTCTTC 1 cut(s) 497
LmnI GCTCC 4 cut(s) 205, 1090, 1147, 1384
Lsp1109I GCAGC 5 cut(s) 282, 304, 412, 890, 1388
LweI GCATC 5 cut(s) 243, 322, 856, 1114, 1237
MaeI CTAG 3 cut(s) 419, 573, 986
MaeII ACGT 1 cut(s) 817
MaeIII GTNAC 3 cut(s) 189, 683, 1038
MalI GATC 5 cut(s) 36, 450, 474, 495, 1438
MboI GATC 5 cut(s) 34, 448, 472, 493, 1436
MfeI CAATTG 1 cut(s) 497
MflI RGATCY 3 cut(s) 34, 448, 472
MhlI GDGCHC 3 cut(s) 657, 1152, 1195
MlsI TGGCCA 2 cut(s) 859, 1313
MluCI AATT 7 cut(s) 84, 408, 497, 514, 622, 944, 1322
MluNI TGGCCA 2 cut(s) 859, 1313
MlyI GAGTC 1 cut(s) 1109
MmeI TCCRAC 3 cut(s) 500, 675, 1185
Mox20I TGGCCA 2 cut(s) 859, 1313
Mph1103I ATGCAT 2 cut(s) 258, 664
MscI TGGCCA 2 cut(s) 859, 1313
MseI TTAA 5 cut(s) 90, 522, 665, 1052, 1064
MslI CAYNNNNRTG 3 cut(s) 125, 228, 261
Msp20I TGGCCA 2 cut(s) 859, 1313
MspA1I CMGCKG 2 cut(s) 295, 1070
MspI CCGG 1 cut(s) 38
MspR9I CCNGG 3 cut(s) 318, 579, 606
MunI CAATTG 1 cut(s) 497
Mva1269I GAATGC 1 cut(s) 1489
MvaI CCWGG 3 cut(s) 318, 579, 606
MvnI CGCG 2 cut(s) 1129, 1238
MwoI GCNNNNNNNGC 8 cut(s) 301, 310, 367, 875, 884, 1247, 1385, 1484
NdeI CATATG 1 cut(s) 725
NdeII GATC 5 cut(s) 34, 448, 472, 493, 1436
NheI GCTAGC 1 cut(s) 985
NlaIII CATG 7 cut(s) 17, 124, 407, 436, 748, 908, 1190
NlaIV GGNNCC 2 cut(s) 36, 1092
NmuCI GTSAC 3 cut(s) 189, 683, 1038
NsiI ATGCAT 2 cut(s) 258, 664
NspI RCATGY 1 cut(s) 17
PaeR7I CTCGAG 1 cut(s) 1242
PceI AGGCCT 2 cut(s) 577, 899
PciSI GCTCTTC 1 cut(s) 497
PctI GAATGC 1 cut(s) 1489
PfeI GAWTC 5 cut(s) 245, 321, 908, 1361, 1472
PfoI TCCNGGA 1 cut(s) 316
PkrI GCNGC 7 cut(s) 294, 297, 402, 842, 880, 1240, 1378
PleI GAGTC 1 cut(s) 1108
PpsI GAGTC 1 cut(s) 1108
PsiI TTATAA 1 cut(s) 707
Psp124BI GAGCTC 2 cut(s) 657, 1152
Psp6I CCWGG 3 cut(s) 316, 577, 604
PspGI CCWGG 3 cut(s) 316, 577, 604
PspN4I GGNNCC 2 cut(s) 36, 1092
PstI CTGCAG 1 cut(s) 30
PstNI CAGNNNCTG 2 cut(s) 248, 884
PsuI RGATCY 3 cut(s) 34, 448, 472
PvuII CAGCTG 2 cut(s) 295, 1070
RsaI GTAC 4 cut(s) 635, 1213, 1235, 1300
RsaNI GTAC 4 cut(s) 634, 1212, 1234, 1299
RseI CAYNNNNRTG 3 cut(s) 125, 228, 261
SacI GAGCTC 2 cut(s) 657, 1152
SapI GCTCTTC 1 cut(s) 497
SaqAI TTAA 5 cut(s) 90, 522, 665, 1052, 1064
SatI GCNGC 7 cut(s) 293, 296, 401, 841, 879, 1239, 1377
Sau3AI GATC 5 cut(s) 34, 448, 472, 493, 1436
SchI GAGTC 1 cut(s) 1109
ScrFI CCNGG 3 cut(s) 318, 579, 606
SduI GDGCHC 3 cut(s) 657, 1152, 1195
SfaNI GCATC 5 cut(s) 243, 322, 856, 1114, 1237
SfcI CTRYAG 3 cut(s) 26, 214, 716
Sfr274I CTCGAG 1 cut(s) 1242
SlaI CTCGAG 1 cut(s) 1242
SmiMI CAYNNNNRTG 3 cut(s) 125, 228, 261
SmlI CTYRAG 2 cut(s) 833, 1242
SmoI CTYRAG 2 cut(s) 833, 1242
SpeI ACTAGT 1 cut(s) 418
Sse9I AATT 7 cut(s) 84, 408, 497, 514, 622, 944, 1322
SseBI AGGCCT 2 cut(s) 577, 899
SsiI CCGC 4 cut(s) 840, 949, 991, 1238
SspMI CTAG 3 cut(s) 419, 573, 986
SstI GAGCTC 2 cut(s) 657, 1152
StuI AGGCCT 2 cut(s) 577, 899
StyD4I CCNGG 3 cut(s) 316, 577, 604
TaaI ACNGT 3 cut(s) 720, 791, 1303
TaiI ACGT 1 cut(s) 820
TaqI TCGA 2 cut(s) 971, 1243
TasI AATT 7 cut(s) 84, 408, 497, 514, 622, 944, 1322
TatI WGTACW 1 cut(s) 1211
TauI GCSGC 2 cut(s) 843, 1241
TfiI GAWTC 5 cut(s) 245, 321, 908, 1361, 1472
Tru1I TTAA 5 cut(s) 90, 522, 665, 1052, 1064
Tru9I TTAA 5 cut(s) 90, 522, 665, 1052, 1064
TscAI CASTG 2 cut(s) 860, 1321
TseFI GTSAC 3 cut(s) 189, 683, 1038
TseI GCWGC 5 cut(s) 292, 295, 400, 878, 1376
Tsp45I GTSAC 3 cut(s) 189, 683, 1038
TspDTI ATGAA 9 cut(s) 212, 260, 313, 402, 420, 712, 761, 795, 1100
TspGWI ACGGA 2 cut(s) 765, 863
TspRI CASTG 2 cut(s) 860, 1321
XapI RAATTY 2 cut(s) 514, 1322
XceI RCATGY 1 cut(s) 17
XcmI CCANNNNNNNNNTGG 1 cut(s) 439
XhoI CTCGAG 1 cut(s) 1242
XspI CTAG 3 cut(s) 419, 573, 986
ZraI GACGTC 1 cut(s) 818
Zsp2I ATGCAT 2 cut(s) 258, 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.