WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13960 AT1G13960 AT2G03340 |
| fragaria_vesca | FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 |
| malus_domestica | MD13G1067600.v1.1 MD16G1066500.v1.1 |
| prunus_persica | Prupe.1G280700_v2.0.a1 Prupe.1G280700_v2.0.a1 |
| pyrus_communis | pycom13g05940 pycom16g05790 |
| rosa_chinensis | RchiOBHm_Chr4g0439041 |
| rosa_laevigata | RLG00000006307 |
| rosa_multiflora | Rmu_sc0001338.1_g000004 Rmu_sc0003226.1_g000090 |
| rosa_roxburghii | Rroxscaffold_5G00380040 |
| rosa_rugosa | Rorug04G0315200 |
| rosa_samantha | Rh4AG365900 Rh4BG377200 Rh4CG391300 Rh4DG371900 |
| rosa_wichuraiana | Rw0G007420 Rw0G016970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 657, 1230 |
| AarI | CACCTGC | 1 cut(s) | 673 |
| Acc36I | ACCTGC | 1 cut(s) | 673 |
| AccB1I | GGYRCC | 1 cut(s) | 125 |
| AccBSI | CCGCTC | 1 cut(s) | 25 |
| AccI | GTMKAC | 1 cut(s) | 633 |
| AccII | CGCG | 2 cut(s) | 67, 1468 |
| AclWI | GGATC | 5 cut(s) | 603, 1280, 1396, 1430, 1443 |
| AcoI | YGGCCR | 1 cut(s) | 772 |
| AfaI | GTAC | 2 cut(s) | 520, 1257 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 383, 560 |
| AgsI | TTSAA | 2 cut(s) | 758, 939 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 202 |
| AhlI | ACTAGT | 1 cut(s) | 983 |
| AjiI | CACGTC | 1 cut(s) | 42 |
| AjnI | CCWGG | 3 cut(s) | 414, 531, 1242 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 866, 898 |
| Alw21I | GWGCWC | 1 cut(s) | 1238 |
| Alw26I | GTCTC | 4 cut(s) | 98, 243, 571, 1051 |
| Alw44I | GTGCAC | 1 cut(s) | 1234 |
| AlwI | GGATC | 5 cut(s) | 603, 1280, 1396, 1430, 1443 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 220, 415 |
| AoxI | GGCC | 4 cut(s) | 155, 252, 411, 772 |
| ApaLI | GTGCAC | 1 cut(s) | 1234 |
| ApeKI | GCWGC | 6 cut(s) | 58, 217, 265, 1277, 1353, 1361 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 154, 186 |
| AspLEI | GCGC | 4 cut(s) | 69, 834, 1179, 1468 |
| AspS9I | GGNCC | 5 cut(s) | 155, 252, 317, 412, 601 |
| AsuC2I | CCSGG | 5 cut(s) | 153, 256, 286, 360, 378 |
| AsuHPI | GGTGA | 2 cut(s) | 697, 812 |
| AvaII | GGWCC | 2 cut(s) | 317, 601 |
| BaeGI | GKGCMC | 1 cut(s) | 1238 |
| BalI | TGGCCA | 1 cut(s) | 774 |
| BamHI | GGATCC | 1 cut(s) | 1435 |
| BanI | GGYRCC | 1 cut(s) | 125 |
| BbsI | GAAGAC | 1 cut(s) | 201 |
| Bbv12I | GWGCWC | 1 cut(s) | 1238 |
| BbvI | GCAGC | 6 cut(s) | 70, 204, 277, 1289, 1365, 1373 |
| BccI | CCATC | 8 cut(s) | 182, 550, 625, 644, 764, 819, 1157, 1426 |
| BceAI | ACGGC | 3 cut(s) | 19, 307, 1280 |
| BciT130I | CCWGG | 3 cut(s) | 416, 533, 1244 |
| BclI | TGATCA | 1 cut(s) | 1450 |
| BcnI | CCSGG | 5 cut(s) | 153, 256, 286, 360, 378 |
| BcoDI | GTCTC | 4 cut(s) | 98, 243, 571, 1051 |
| BcuI | ACTAGT | 1 cut(s) | 983 |
| BfaI | CTAG | 5 cut(s) | 705, 963, 968, 984, 1119 |
| BfmI | CTRYAG | 2 cut(s) | 1168, 1461 |
| BfoI | RGCGCY | 1 cut(s) | 835 |
| BfuAI | ACCTGC | 1 cut(s) | 673 |
| BisI | GCNGC | 8 cut(s) | 26, 59, 218, 266, 329, 1278, 1354, 1362 |
| BlsI | GCNGC | 8 cut(s) | 27, 60, 219, 267, 330, 1279, 1355, 1363 |
| Bme1390I | CCNGG | 8 cut(s) | 153, 256, 286, 360, 378, 416, 533, 1244 |
| Bme18I | GGWCC | 2 cut(s) | 317, 601 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 202 |
| BmgBI | CACGTC | 1 cut(s) | 42 |
| BmgT120I | GGNCC | 5 cut(s) | 155, 252, 317, 412, 601 |
| BmiI | GGNNCC | 6 cut(s) | 127, 156, 229, 388, 1405, 1437 |
| BmrFI | CCNGG | 8 cut(s) | 153, 256, 286, 360, 378, 416, 533, 1244 |
| BmrI | ACTGGG | 1 cut(s) | 150 |
| BmsI | GCATC | 7 cut(s) | 412, 528, 736, 997, 1039, 1238, 1385 |
| BmuI | ACTGGG | 1 cut(s) | 150 |
| BoxI | GACNNNNGTC | 1 cut(s) | 322 |
| BpiI | GAAGAC | 1 cut(s) | 201 |
| BpmI | CTGGAG | 1 cut(s) | 499 |
| Bpu10I | CCTNAGC | 1 cut(s) | 432 |
| BpuEI | CTTGAG | 2 cut(s) | 290, 405 |
| BpuMI | CCSGG | 5 cut(s) | 153, 256, 286, 360, 378 |
| BsaAI | YACGTR | 1 cut(s) | 1259 |
| BsaI | GGTCTC | 1 cut(s) | 571 |
| BsaJI | CCNNGG | 7 cut(s) | 89, 152, 285, 414, 531, 1217, 1243 |
| BsaWI | WCCGGW | 1 cut(s) | 303 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 383, 560 |
| Bse118I | RCCGGY | 1 cut(s) | 128 |
| Bse1I | ACTGG | 5 cut(s) | 145, 301, 503, 516, 1140 |
| Bse3DI | GCAATG | 1 cut(s) | 1258 |
| BseBI | CCWGG | 3 cut(s) | 416, 533, 1244 |
| BseDI | CCNNGG | 7 cut(s) | 89, 152, 285, 414, 531, 1217, 1243 |
| BseGI | GGATG | 5 cut(s) | 295, 727, 876, 1253, 1437 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 383, 560 |
| BseMI | GCAATG | 1 cut(s) | 1258 |
| BseMII | CTCAG | 3 cut(s) | 227, 446, 836 |
| BseNI | ACTGG | 5 cut(s) | 145, 301, 503, 516, 1140 |
| BseRI | GAGGAG | 2 cut(s) | 287, 292 |
| BseSI | GKGCMC | 1 cut(s) | 1238 |
| BseXI | GCAGC | 6 cut(s) | 70, 204, 277, 1289, 1365, 1373 |
| BseYI | CCCAGC | 1 cut(s) | 731 |
| BsgI | GTGCAG | 1 cut(s) | 1151 |
| Bsh1236I | CGCG | 2 cut(s) | 67, 1468 |
| BshFI | GGCC | 4 cut(s) | 157, 254, 413, 774 |
| BshNI | GGYRCC | 1 cut(s) | 125 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1238 |
| BslFI | GGGAC | 2 cut(s) | 943, 994 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 383, 560 |
| BsmAI | GTCTC | 4 cut(s) | 98, 243, 571, 1051 |
| BsmBI | CGTCTC | 2 cut(s) | 98, 1051 |
| BsmFI | GGGAC | 2 cut(s) | 943, 994 |
| BsmI | GAATGC | 1 cut(s) | 1078 |
| BsnI | GGCC | 4 cut(s) | 157, 254, 413, 774 |
| Bso31I | GGTCTC | 1 cut(s) | 571 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1238 |
| Bsp143I | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| BspANI | GGCC | 4 cut(s) | 157, 254, 413, 774 |
| BspCNI | CTCAG | 3 cut(s) | 226, 445, 835 |
| BspFNI | CGCG | 2 cut(s) | 67, 1468 |
| BspHI | TCATGA | 2 cut(s) | 877, 1327 |
| BspLI | GGNNCC | 6 cut(s) | 127, 156, 229, 388, 1405, 1437 |
| BspMI | ACCTGC | 1 cut(s) | 673 |
| BspPI | GGATC | 5 cut(s) | 603, 1280, 1396, 1430, 1443 |
| BspT107I | GGYRCC | 1 cut(s) | 125 |
| BspTNI | GGTCTC | 1 cut(s) | 571 |
| BsrBI | CCGCTC | 1 cut(s) | 25 |
| BsrDI | GCAATG | 1 cut(s) | 1258 |
| BsrFI | RCCGGY | 1 cut(s) | 128 |
| BsrI | ACTGG | 5 cut(s) | 145, 301, 503, 516, 1140 |
| BssAI | RCCGGY | 1 cut(s) | 128 |
| BssECI | CCNNGG | 7 cut(s) | 89, 152, 285, 414, 531, 1217, 1243 |
| BssMI | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| BssT1I | CCWWGG | 1 cut(s) | 1217 |
| Bst2UI | CCWGG | 3 cut(s) | 416, 533, 1244 |
| Bst4CI | ACNGT | 3 cut(s) | 631, 992, 1108 |
| BstBAI | YACGTR | 1 cut(s) | 1259 |
| BstC8I | GCNNGC | 6 cut(s) | 222, 411, 725, 1089, 1338, 1416 |
| BstDEI | CTNAG | 5 cut(s) | 213, 432, 822, 828, 945 |
| BstF5I | GGATG | 5 cut(s) | 295, 727, 876, 1253, 1437 |
| BstFNI | CGCG | 2 cut(s) | 67, 1468 |
| BstH2I | RGCGCY | 1 cut(s) | 835 |
| BstHHI | GCGC | 4 cut(s) | 69, 834, 1179, 1468 |
| BstKTI | GATC | 7 cut(s) | 78, 611, 1153, 1288, 1391, 1438, 1453 |
| BstMAI | GTCTC | 4 cut(s) | 98, 243, 571, 1051 |
| BstMBI | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 31, 64, 251, 328, 1084, 1465 |
| BstNI | CCWGG | 3 cut(s) | 416, 533, 1244 |
| BstNSI | RCATGY | 1 cut(s) | 1418 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 322 |
| BstSCI | CCNGG | 8 cut(s) | 151, 254, 284, 358, 376, 414, 531, 1242 |
| BstSFI | CTRYAG | 2 cut(s) | 1168, 1461 |
| BstSLI | GKGCMC | 1 cut(s) | 1238 |
| BstSNI | TACGTA | 1 cut(s) | 1259 |
| BstUI | CGCG | 2 cut(s) | 67, 1468 |
| BstV1I | GCAGC | 6 cut(s) | 70, 204, 277, 1289, 1365, 1373 |
| BstV2I | GAAGAC | 1 cut(s) | 201 |
| BstX2I | RGATCY | 3 cut(s) | 608, 1285, 1435 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 899 |
| BstYI | RGATCY | 3 cut(s) | 608, 1285, 1435 |
| BsuRI | GGCC | 4 cut(s) | 157, 254, 413, 774 |
| BtrI | CACGTC | 1 cut(s) | 42 |
| BtsCI | GGATG | 5 cut(s) | 295, 727, 876, 1253, 1437 |
| BtsIMutI | CAGTG | 3 cut(s) | 294, 997, 1147 |
| BveI | ACCTGC | 1 cut(s) | 673 |
| Cac8I | GCNNGC | 6 cut(s) | 222, 411, 725, 1089, 1338, 1416 |
| CaiI | CAGNNNCTG | 2 cut(s) | 220, 415 |
| CciI | TCATGA | 2 cut(s) | 877, 1327 |
| CfoI | GCGC | 4 cut(s) | 69, 834, 1179, 1468 |
| Cfr10I | RCCGGY | 1 cut(s) | 128 |
| Cfr13I | GGNCC | 5 cut(s) | 155, 252, 317, 412, 601 |
| CseI | GACGC | 2 cut(s) | 409, 806 |
| Csp6I | GTAC | 2 cut(s) | 519, 1256 |
| CviAII | CATG | 5 cut(s) | 232, 878, 899, 1328, 1415 |
| CviQI | GTAC | 2 cut(s) | 519, 1256 |
| DdeI | CTNAG | 5 cut(s) | 213, 432, 822, 828, 945 |
| DpnI | GATC | 7 cut(s) | 77, 610, 1152, 1287, 1390, 1437, 1452 |
| DpnII | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| DraI | TTTAAA | 2 cut(s) | 310, 1479 |
| DriI | GACNNNNNGTC | 1 cut(s) | 202 |
| EaeI | YGGCCR | 1 cut(s) | 772 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 202 |
| EciI | GGCGGA | 2 cut(s) | 260, 679 |
| Eco105I | TACGTA | 1 cut(s) | 1259 |
| Eco130I | CCWWGG | 1 cut(s) | 1217 |
| Eco31I | GGTCTC | 1 cut(s) | 571 |
| Eco32I | GATATC | 1 cut(s) | 589 |
| Eco47I | GGWCC | 2 cut(s) | 317, 601 |
| EcoO109I | RGGNCCY | 1 cut(s) | 412 |
| EcoRII | CCWGG | 3 cut(s) | 414, 531, 1242 |
| EcoRV | GATATC | 1 cut(s) | 589 |
| EcoT14I | CCWWGG | 1 cut(s) | 1217 |
| ErhI | CCWWGG | 1 cut(s) | 1217 |
| Esp3I | CGTCTC | 2 cut(s) | 98, 1051 |
| FaeI | CATG | 5 cut(s) | 235, 881, 902, 1331, 1418 |
| FaqI | GGGAC | 2 cut(s) | 943, 994 |
| FatI | CATG | 5 cut(s) | 231, 877, 898, 1327, 1414 |
| FauI | CCCGC | 4 cut(s) | 93, 125, 217, 334 |
| FauNDI | CATATG | 1 cut(s) | 1309 |
| FbaI | TGATCA | 1 cut(s) | 1450 |
| FblI | GTMKAC | 1 cut(s) | 633 |
| Fnu4HI | GCNGC | 8 cut(s) | 26, 59, 218, 266, 329, 1278, 1354, 1362 |
| FokI | GGATG | 5 cut(s) | 302, 714, 883, 1260, 1444 |
| Fsp4HI | GCNGC | 8 cut(s) | 26, 59, 218, 266, 329, 1278, 1354, 1362 |
| FspBI | CTAG | 5 cut(s) | 705, 963, 968, 984, 1119 |
| GlaI | GCGC | 4 cut(s) | 68, 833, 1178, 1467 |
| GluI | GCNGC | 8 cut(s) | 26, 59, 218, 266, 329, 1278, 1354, 1362 |
| GsaI | CCCAGC | 1 cut(s) | 735 |
| GsuI | CTGGAG | 1 cut(s) | 499 |
| HaeII | RGCGCY | 1 cut(s) | 835 |
| HaeIII | GGCC | 4 cut(s) | 157, 254, 413, 774 |
| HgaI | GACGC | 2 cut(s) | 409, 806 |
| HhaI | GCGC | 4 cut(s) | 69, 834, 1179, 1468 |
| Hin1II | CATG | 5 cut(s) | 235, 881, 902, 1331, 1418 |
| Hin6I | GCGC | 4 cut(s) | 67, 832, 1177, 1466 |
| HinP1I | GCGC | 4 cut(s) | 67, 832, 1177, 1466 |
| HincII | GTYRAC | 1 cut(s) | 634 |
| HindII | GTYRAC | 1 cut(s) | 634 |
| HinfI | GANTC | 7 cut(s) | 353, 557, 578, 842, 874, 959, 1122 |
| HphI | GGTGA | 2 cut(s) | 697, 812 |
| Hpy166II | GTNNAC | 4 cut(s) | 39, 634, 1236, 1472 |
| Hpy188I | TCNGA | 7 cut(s) | 187, 586, 601, 678, 870, 1084, 1104 |
| Hpy188III | TCNNGA | 6 cut(s) | 546, 745, 846, 878, 956, 1328 |
| Hpy8I | GTNNAC | 4 cut(s) | 39, 634, 1236, 1472 |
| Hpy99I | CGWCG | 1 cut(s) | 328 |
| HpyAV | CCTTC | 3 cut(s) | 72, 682, 920 |
| HpyCH4III | ACNGT | 3 cut(s) | 631, 992, 1108 |
| HpyCH4IV | ACGT | 5 cut(s) | 41, 164, 1258, 1266, 1474 |
| HpyCH4V | TGCA | 5 cut(s) | 201, 723, 1132, 1236, 1251 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 31, 64, 251, 328, 1084, 1465 |
| HpyF3I | CTNAG | 5 cut(s) | 213, 432, 822, 828, 945 |
| HpySE526I | ACGT | 5 cut(s) | 41, 164, 1258, 1266, 1474 |
| Hsp92II | CATG | 5 cut(s) | 235, 881, 902, 1331, 1418 |
| HspAI | GCGC | 4 cut(s) | 67, 832, 1177, 1466 |
| Ksp22I | TGATCA | 1 cut(s) | 1450 |
| Kzo9I | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| LmnI | GCTCC | 4 cut(s) | 227, 386, 518, 1221 |
| Lsp1109I | GCAGC | 6 cut(s) | 70, 204, 277, 1289, 1365, 1373 |
| LweI | GCATC | 7 cut(s) | 412, 528, 736, 997, 1039, 1238, 1385 |
| MaeI | CTAG | 5 cut(s) | 705, 963, 968, 984, 1119 |
| MaeII | ACGT | 5 cut(s) | 41, 164, 1258, 1266, 1474 |
| MaeIII | GTNAC | 3 cut(s) | 424, 986, 1108 |
| MalI | GATC | 7 cut(s) | 77, 610, 1152, 1287, 1390, 1437, 1452 |
| MbiI | CCGCTC | 1 cut(s) | 25 |
| MboI | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| MboII | GAAGA | 8 cut(s) | 29, 172, 206, 612, 1037, 1049, 1086, 1496 |
| MflI | RGATCY | 3 cut(s) | 608, 1285, 1435 |
| MhlI | GDGCHC | 1 cut(s) | 1238 |
| MlsI | TGGCCA | 1 cut(s) | 774 |
| MluCI | AATT | 1 cut(s) | 658 |
| MluNI | TGGCCA | 1 cut(s) | 774 |
| MlyI | GAGTC | 1 cut(s) | 347 |
| Mox20I | TGGCCA | 1 cut(s) | 774 |
| MscI | TGGCCA | 1 cut(s) | 774 |
| MseI | TTAA | 3 cut(s) | 114, 309, 1478 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1326 |
| Msp20I | TGGCCA | 1 cut(s) | 774 |
| MspA1I | CMGCKG | 3 cut(s) | 217, 331, 735 |
| MspR9I | CCNGG | 8 cut(s) | 153, 256, 286, 360, 378, 416, 533, 1244 |
| Mva1269I | GAATGC | 1 cut(s) | 1078 |
| MvaI | CCWGG | 3 cut(s) | 416, 533, 1244 |
| MvnI | CGCG | 2 cut(s) | 67, 1468 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 31, 64, 251, 328, 1084, 1465 |
| NciI | CCSGG | 5 cut(s) | 153, 256, 286, 360, 378 |
| NdeI | CATATG | 1 cut(s) | 1309 |
| NdeII | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| NlaIII | CATG | 5 cut(s) | 235, 881, 902, 1331, 1418 |
| NlaIV | GGNNCC | 6 cut(s) | 127, 156, 229, 388, 1405, 1437 |
| NmeAIII | GCCGAG | 1 cut(s) | 114 |
| NmuCI | GTSAC | 3 cut(s) | 424, 986, 1108 |
| NspI | RCATGY | 1 cut(s) | 1418 |
| PaeI | GCATGC | 1 cut(s) | 1418 |
| PagI | TCATGA | 2 cut(s) | 877, 1327 |
| PaqCI | CACCTGC | 1 cut(s) | 673 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 71, 170 |
| PctI | GAATGC | 1 cut(s) | 1078 |
| PfeI | GAWTC | 6 cut(s) | 557, 578, 842, 874, 959, 1122 |
| PkrI | GCNGC | 8 cut(s) | 27, 60, 219, 267, 330, 1279, 1355, 1363 |
| PleI | GAGTC | 1 cut(s) | 347 |
| PpsI | GAGTC | 1 cut(s) | 347 |
| Ppu21I | YACGTR | 1 cut(s) | 1259 |
| PshAI | GACNNNNGTC | 1 cut(s) | 322 |
| PsiI | TTATAA | 2 cut(s) | 657, 1230 |
| Psp6I | CCWGG | 3 cut(s) | 414, 531, 1242 |
| PspFI | CCCAGC | 1 cut(s) | 731 |
| PspGI | CCWGG | 3 cut(s) | 414, 531, 1242 |
| PspN4I | GGNNCC | 6 cut(s) | 127, 156, 229, 388, 1405, 1437 |
| PspPI | GGNCC | 5 cut(s) | 155, 252, 317, 412, 601 |
| PstNI | CAGNNNCTG | 2 cut(s) | 220, 415 |
| PsuI | RGATCY | 3 cut(s) | 608, 1285, 1435 |
| PvuII | CAGCTG | 2 cut(s) | 217, 735 |
| RsaI | GTAC | 2 cut(s) | 520, 1257 |
| RsaNI | GTAC | 2 cut(s) | 519, 1256 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1326 |
| SalI | GTCGAC | 1 cut(s) | 632 |
| SaqAI | TTAA | 3 cut(s) | 114, 309, 1478 |
| SatI | GCNGC | 8 cut(s) | 26, 59, 218, 266, 329, 1278, 1354, 1362 |
| Sau3AI | GATC | 7 cut(s) | 75, 608, 1150, 1285, 1388, 1435, 1450 |
| Sau96I | GGNCC | 5 cut(s) | 155, 252, 317, 412, 601 |
| SchI | GAGTC | 1 cut(s) | 347 |
| ScrFI | CCNGG | 8 cut(s) | 153, 256, 286, 360, 378, 416, 533, 1244 |
| SduI | GDGCHC | 1 cut(s) | 1238 |
| SfaNI | GCATC | 7 cut(s) | 412, 528, 736, 997, 1039, 1238, 1385 |
| SfcI | CTRYAG | 2 cut(s) | 1168, 1461 |
| SgrAI | CRCCGGYG | 1 cut(s) | 128 |
| SinI | GGWCC | 2 cut(s) | 317, 601 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1326 |
| SmlI | CTYRAG | 2 cut(s) | 269, 420 |
| SmoI | CTYRAG | 2 cut(s) | 269, 420 |
| SnaBI | TACGTA | 1 cut(s) | 1259 |
| SpeI | ACTAGT | 1 cut(s) | 983 |
| SphI | GCATGC | 1 cut(s) | 1418 |
| Sse9I | AATT | 1 cut(s) | 658 |
| SspI | AATATT | 1 cut(s) | 1384 |
| SspMI | CTAG | 5 cut(s) | 705, 963, 968, 984, 1119 |
| StyD4I | CCNGG | 8 cut(s) | 151, 254, 284, 358, 376, 414, 531, 1242 |
| StyI | CCWWGG | 1 cut(s) | 1217 |
| TaaI | ACNGT | 3 cut(s) | 631, 992, 1108 |
| TaiI | ACGT | 5 cut(s) | 44, 167, 1261, 1269, 1477 |
| TaqI | TCGA | 4 cut(s) | 173, 351, 633, 1441 |
| TasI | AATT | 1 cut(s) | 658 |
| TatI | WGTACW | 1 cut(s) | 518 |
| TauI | GCSGC | 2 cut(s) | 28, 331 |
| TfiI | GAWTC | 6 cut(s) | 557, 578, 842, 874, 959, 1122 |
| Tru1I | TTAA | 3 cut(s) | 114, 309, 1478 |
| Tru9I | TTAA | 3 cut(s) | 114, 309, 1478 |
| TscAI | CASTG | 3 cut(s) | 301, 997, 1147 |
| TseFI | GTSAC | 3 cut(s) | 424, 986, 1108 |
| TseI | GCWGC | 6 cut(s) | 58, 217, 265, 1277, 1353, 1361 |
| Tsp45I | GTSAC | 3 cut(s) | 424, 986, 1108 |
| TspDTI | ATGAA | 9 cut(s) | 17, 452, 489, 587, 612, 887, 887, 1050, 1056 |
| TspRI | CASTG | 3 cut(s) | 301, 997, 1147 |
| VneI | GTGCAC | 1 cut(s) | 1234 |
| VpaK11BI | GGWCC | 2 cut(s) | 317, 601 |
| XceI | RCATGY | 1 cut(s) | 1418 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 899 |
| XmiI | GTMKAC | 1 cut(s) | 633 |
| XspI | CTAG | 5 cut(s) | 705, 963, 968, 984, 1119 |