Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00751

Orthogroup ID

OG0007326

Physical Location & Seq

Genomic Coordinates Forward (+)

635378 .. 637923

Gene Structure 2546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G016970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGCTGGAAACGAAGAAGAACACCGGCAGCCGCCGTCCACGTCGTCATCTCGTCCTCCGCATCCCACGATTACTCTGCCGCCGCGGACTAGTTTTGAGACCATGTTTAACAACAACTCCGGAACAGGCGGGAATACTGGGGCGGGCTTGGGGTTCAGTCCGGGGCCGATGACTCTGGTTTCGAGCTTCTTCTCTGATGGGGAAGACTGCAAGTCGTTTTCTCAGCTGCTGGCTGGAGCCATGCTGTCTCCGGCGGACAGGGCGGCGTTTCCGCCGCTTGAAGACAGGAATTCCGGGGATGACAGCAGTGATTTCCGGTTCAAGAATGGACCGGCGGGTATGTCGATTGGACCGCTGTCGCCGATGTTTCCGGCTGGTTTCCTCGACTCGCCGGGAGGACTATTCTCGCCCGGACAGGGAGCCTTTGGAATGACGCACCAGCAAGCACTAGCTCAAGTGACAGCTCAGGCTTCACAATCCCAATCCTACACTTTTCATATCCCAAATGAACACTCTACGTCTATGACACAGCTTCCGATCTTTACTTCCAGTACAACACCACCCCAGGAGATGCCATCTGAAATACCCGATTCTGGGGTCACTCTGAAAGAATCGTCTGATATCTCACATTCGGAACAGAGATCCCAACCATCTTCATTGACTGTCGACAAGCCTAATGATGACGGTTACAATTGGCGGAAATATGGGCAGAAGCAGGTGAAGGGGAGTGAGTTTCCTAGAAGTTATTACAAATGCACGCATCCCAGTTGTCCAGTCAAGAAAAAGGTTGAACGCTCGGTTGATGGCCAGATAACTGAAATCATTTACAAGGGTGAGCATAACCATCAGCGTCCTCAATCTAAGCGCCCAAAGGATTCTGGAAATCAAAATGGAAATGTTCAGGTGAATCATGACTTAGCTTCCCAAGTTCATGGTGGGAACTTGAACAAATCAAAAGAAGGGACTTATTCAATGTCTAAGCAGGGTCAGGAATCTAGCCAAGCAATATCTGGGACAAGTGACAGTGAGGAAGTTGGAGATGCTGAAACAAAAGTAGAAGAAAAAGATGAAGATGAACCTGCTGCCAAGAGACGAAATATGGAGGTCAGGCATTCAGAGCCAGCTTCTTCTCATCGGACTGTGACAGAGCCTAGAATCATAGTGCAGACAACCAGTGAAGTTGATCTGTTAGATGATGGCTACCGGTGGCGAAAGTATGGGCAGAAAGTTGTCAAAGGCAATCCTTATCCAAGGAGCTATTATAAATGCACATTCCAGGGATGCAATGTACGTAAGCACGTAGAGAGAGCAGCAACAGATCCTAAAGCCGTCATAACAACATATGAGGGCAAACATAATCATGATGTACCTGCTTCTAAATCTGGCAGCCACTACGCAGCCAACAACAATGCATCAAATCTAAGATCAGGCAACCCGGGAACTGAAAAGCATGCCTCAGTTAGCAAGATGGATCCTCAAAACAATGACCAACAGCCTGTAGCGCGTCTACGTTTAAAAGAAGAACAAATAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043901 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1900150 GO:1900424 GO:1900425 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

511

Amino Acids

55.85

Weight (kDa)

6.53

Isoelectric Point (pI)

58.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	227 - 283	1e-27	WRKY DNA -binding domain
WRKY	PF03106	398 - 455	9.3e-27	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13960 AT1G13960 AT2G03340
fragaria_vesca	FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 FvH4_4g30640
malus_domestica	MD13G1067600.v1.1 MD16G1066500.v1.1
prunus_persica	Prupe.1G280700_v2.0.a1 Prupe.1G280700_v2.0.a1
pyrus_communis	pycom13g05940 pycom16g05790
rosa_chinensis	RchiOBHm_Chr4g0439041
rosa_laevigata	RLG00000006307
rosa_multiflora	Rmu_sc0001338.1_g000004 Rmu_sc0003226.1_g000090
rosa_roxburghii	Rroxscaffold_5G00380040
rosa_rugosa	Rorug04G0315200
rosa_samantha	Rh4AG365900 Rh4BG377200 Rh4CG391300 Rh4DG371900
rosa_wichuraiana	Rw0G007420 Rw0G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1263
AarI	CACCTGC	1 cut(s)	706
Acc36I	ACCTGC	3 cut(s)	706, 1087, 1378
AccI	GTMKAC	2 cut(s)	666, 1507
AccII	CGCG	2 cut(s)	85, 1504
AccIII	TCCGGA	1 cut(s)	119
AclWI	GGATC	4 cut(s)	636, 1313, 1466, 1479
AcoI	YGGCCR	1 cut(s)	805
AcsI	RAATTY	1 cut(s)	289
AfaI	GTAC	3 cut(s)	553, 1290, 1368
AfiI	CCNNNNNNNGG	3 cut(s)	416, 593, 594
AgeI	ACCGGT	1 cut(s)	1203
AgsI	TTSAA	5 cut(s)	281, 322, 791, 946, 972
AhdI	GACNNNNNGTC	1 cut(s)	211
AhlI	ACTAGT	1 cut(s)	89
AjiI	CACGTC	1 cut(s)	42
AjnI	CCWGG	2 cut(s)	564, 1275
AluBI	AGCT	8 cut(s)	186, 226, 452, 464, 532, 920, 1124, 1257
AluI	AGCT	8 cut(s)	186, 226, 452, 464, 532, 920, 1124, 1257
Alw26I	GTCTC	3 cut(s)	92, 252, 1084
AlwI	GGATC	4 cut(s)	636, 1313, 1466, 1479
AlwNI	CAGNNNCTG	1 cut(s)	229
Ama87I	CYCGRG	1 cut(s)	1435
Aor13HI	TCCGGA	1 cut(s)	119
AoxI	GGCC	2 cut(s)	164, 805
ApeKI	GCWGC	6 cut(s)	28, 226, 1082, 1310, 1386, 1397
ApoI	RAATTY	1 cut(s)	289
ArsI	GACNNNNNNTTYG	2 cut(s)	163, 195
AsiGI	ACCGGT	1 cut(s)	1203
AspLEI	GCGC	2 cut(s)	867, 1504
AspS9I	GGNCC	3 cut(s)	164, 329, 350
AsuC2I	CCSGG	6 cut(s)	162, 295, 393, 411, 1436, 1437
AsuHPI	GGTGA	3 cut(s)	730, 845, 916
AvaI	CYCGRG	1 cut(s)	1435
AvaII	GGWCC	2 cut(s)	329, 350
BalI	TGGCCA	1 cut(s)	807
BamHI	GGATCC	1 cut(s)	1471
BbsI	GAAGAC	2 cut(s)	210, 288
BbvI	GCAGC	6 cut(s)	40, 213, 1069, 1322, 1398, 1409
BccI	CCATC	7 cut(s)	191, 583, 658, 797, 852, 1190, 1462
BceAI	ACGGC	2 cut(s)	19, 1313
BcgI	CGANNNNNNTGC	2 cut(s)	58, 92
BciT130I	CCWGG	2 cut(s)	566, 1277
BcnI	CCSGG	6 cut(s)	162, 295, 393, 411, 1436, 1437
BcoDI	GTCTC	3 cut(s)	92, 252, 1084
BcuI	ACTAGT	1 cut(s)	89
BfaI	CTAG	5 cut(s)	90, 449, 738, 996, 1152
BfmI	CTRYAG	1 cut(s)	1497
BfoI	RGCGCY	1 cut(s)	868
BfuAI	ACCTGC	3 cut(s)	706, 1087, 1378
Bme1390I	CCNGG	8 cut(s)	162, 295, 393, 411, 566, 1277, 1436, 1437
Bme18I	GGWCC	2 cut(s)	329, 350
BmeRI	GACNNNNNGTC	1 cut(s)	211
BmeT110I	CYCGRG	1 cut(s)	1435
BmgBI	CACGTC	1 cut(s)	42
BmgT120I	GGNCC	3 cut(s)	164, 329, 350
BmiI	GGNNCC	4 cut(s)	165, 238, 421, 1473
BmrFI	CCNGG	8 cut(s)	162, 295, 393, 411, 566, 1277, 1436, 1437
BmrI	ACTGGG	2 cut(s)	147, 759
BmsI	GCATC	6 cut(s)	70, 561, 769, 1030, 1271, 1421
BmuI	ACTGGG	2 cut(s)	147, 759
BoxI	GACNNNNGTC	1 cut(s)	355
BpiI	GAAGAC	2 cut(s)	210, 288
BpmI	CTGGAG	1 cut(s)	255
Bpu10I	CCTNAGC	1 cut(s)	465
BpuEI	CTTGAG	1 cut(s)	438
BpuMI	CCSGG	6 cut(s)	162, 295, 393, 411, 1436, 1437
BsaAI	YACGTR	2 cut(s)	1292, 1300
BsaI	GGTCTC	1 cut(s)	92
BsaJI	CCNNGG	7 cut(s)	83, 161, 294, 564, 1250, 1276, 1435
BsaWI	WCCGGW	3 cut(s)	119, 315, 1203
BsaXI	ACNNNNNCTCC	2 cut(s)	101, 131
Bsc4I	CCNNNNNNNGG	3 cut(s)	416, 593, 594
Bse118I	RCCGGY	3 cut(s)	24, 331, 1203
Bse1I	ACTGG	5 cut(s)	142, 549, 765, 773, 1173
Bse3DI	GCAATG	1 cut(s)	1291
BseAI	TCCGGA	1 cut(s)	119
BseBI	CCWGG	2 cut(s)	566, 1277
BseDI	CCNNGG	7 cut(s)	83, 161, 294, 564, 1250, 1276, 1435
BseGI	GGATG	4 cut(s)	61, 304, 760, 1286
BseLI	CCNNNNNNNGG	3 cut(s)	416, 593, 594
BseMI	GCAATG	1 cut(s)	1291
BseMII	CTCAG	3 cut(s)	236, 479, 1470
BseNI	ACTGG	5 cut(s)	142, 549, 765, 773, 1173
BseXI	GCAGC	6 cut(s)	40, 213, 1069, 1322, 1398, 1409
BsgI	GTGCAG	1 cut(s)	1184
Bsh1236I	CGCG	2 cut(s)	85, 1504
BshFI	GGCC	2 cut(s)	166, 807
BshTI	ACCGGT	1 cut(s)	1203
BsiHKCI	CYCGRG	1 cut(s)	1435
BslFI	GGGAC	2 cut(s)	976, 1027
BslI	CCNNNNNNNGG	3 cut(s)	416, 593, 594
BsmAI	GTCTC	3 cut(s)	92, 252, 1084
BsmBI	CGTCTC	1 cut(s)	1084
BsmFI	GGGAC	2 cut(s)	976, 1027
BsmI	GAATGC	1 cut(s)	1111
BsnI	GGCC	2 cut(s)	166, 807
Bso31I	GGTCTC	1 cut(s)	92
BsoBI	CYCGRG	1 cut(s)	1435
Bsp13I	TCCGGA	1 cut(s)	119
Bsp143I	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
BspANI	GGCC	2 cut(s)	166, 807
BspCNI	CTCAG	3 cut(s)	235, 478, 1469
BspEI	TCCGGA	1 cut(s)	119
BspFNI	CGCG	2 cut(s)	85, 1504
BspHI	TCATGA	2 cut(s)	910, 1360
BspLI	GGNNCC	4 cut(s)	165, 238, 421, 1473
BspMI	ACCTGC	3 cut(s)	706, 1087, 1378
BspPI	GGATC	4 cut(s)	636, 1313, 1466, 1479
BspTNI	GGTCTC	1 cut(s)	92
BsrDI	GCAATG	1 cut(s)	1291
BsrFI	RCCGGY	3 cut(s)	24, 331, 1203
BsrI	ACTGG	5 cut(s)	142, 549, 765, 773, 1173
BssAI	RCCGGY	3 cut(s)	24, 331, 1203
BssECI	CCNNGG	7 cut(s)	83, 161, 294, 564, 1250, 1276, 1435
BssMI	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
BssT1I	CCWWGG	1 cut(s)	1250
Bst2UI	CCWGG	2 cut(s)	566, 1277
Bst4CI	ACNGT	4 cut(s)	664, 686, 1025, 1141
BstBAI	YACGTR	2 cut(s)	1292, 1300
BstC8I	GCNNGC	6 cut(s)	145, 231, 444, 758, 1122, 1452
BstDEI	CTNAG	7 cut(s)	222, 465, 861, 916, 978, 1421, 1456
BstDSI	CCRYGG	1 cut(s)	83
BstF5I	GGATG	4 cut(s)	61, 304, 760, 1286
BstFNI	CGCG	2 cut(s)	85, 1504
BstH2I	RGCGCY	1 cut(s)	868
BstHHI	GCGC	2 cut(s)	867, 1504
BstKTI	GATC	6 cut(s)	540, 644, 1186, 1321, 1427, 1474
BstMAI	GTCTC	3 cut(s)	92, 252, 1084
BstMBI	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
BstMWI	GCNNNNNNNGC	3 cut(s)	260, 1117, 1501
BstNI	CCWGG	2 cut(s)	566, 1277
BstNSI	RCATGY	1 cut(s)	1454
BstPAI	GACNNNNGTC	1 cut(s)	355
BstSCI	CCNGG	8 cut(s)	160, 293, 391, 409, 564, 1275, 1434, 1435
BstSFI	CTRYAG	1 cut(s)	1497
BstSNI	TACGTA	1 cut(s)	1292
BstUI	CGCG	2 cut(s)	85, 1504
BstV1I	GCAGC	6 cut(s)	40, 213, 1069, 1322, 1398, 1409
BstV2I	GAAGAC	2 cut(s)	210, 288
BstX2I	RGATCY	3 cut(s)	641, 1318, 1471
BstXI	CCANNNNNNTGG	1 cut(s)	932
BstYI	RGATCY	3 cut(s)	641, 1318, 1471
BsuRI	GGCC	2 cut(s)	166, 807
BtgI	CCRYGG	1 cut(s)	83
BtrI	CACGTC	1 cut(s)	42
BtsCI	GGATG	4 cut(s)	61, 304, 760, 1286
BtsI	GCAGTG	1 cut(s)	313
BtsIMutI	CAGTG	3 cut(s)	313, 1030, 1180
BveI	ACCTGC	3 cut(s)	706, 1087, 1378
Cac8I	GCNNGC	6 cut(s)	145, 231, 444, 758, 1122, 1452
CaiI	CAGNNNCTG	1 cut(s)	229
CciI	TCATGA	2 cut(s)	910, 1360
CfoI	GCGC	2 cut(s)	867, 1504
Cfr10I	RCCGGY	3 cut(s)	24, 331, 1203
Cfr13I	GGNCC	3 cut(s)	164, 329, 350
Cfr42I	CCGCGG	1 cut(s)	86
Cfr9I	CCCGGG	1 cut(s)	1435
CseI	GACGC	3 cut(s)	442, 839, 1493
Csp6I	GTAC	3 cut(s)	552, 1289, 1367
CspAI	ACCGGT	1 cut(s)	1203
CviAII	CATG	6 cut(s)	103, 241, 911, 932, 1361, 1451
CviQI	GTAC	3 cut(s)	552, 1289, 1367
DdeI	CTNAG	7 cut(s)	222, 465, 861, 916, 978, 1421, 1456
DpnI	GATC	6 cut(s)	539, 643, 1185, 1320, 1426, 1473
DpnII	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
DraI	TTTAAA	1 cut(s)	1515
DriI	GACNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	1 cut(s)	805
Eam1105I	GACNNNNNGTC	1 cut(s)	211
EciI	GGCGGA	3 cut(s)	261, 269, 712
Eco105I	TACGTA	1 cut(s)	1292
Eco130I	CCWWGG	1 cut(s)	1250
Eco31I	GGTCTC	1 cut(s)	92
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	2 cut(s)	329, 350
Eco88I	CYCGRG	1 cut(s)	1435
EcoRI	GAATTC	1 cut(s)	289
EcoRII	CCWGG	2 cut(s)	564, 1275
EcoRV	GATATC	1 cut(s)	622
EcoT14I	CCWWGG	1 cut(s)	1250
EcoT22I	ATGCAT	1 cut(s)	1414
ErhI	CCWWGG	1 cut(s)	1250
Esp3I	CGTCTC	1 cut(s)	1084
FaeI	CATG	6 cut(s)	106, 244, 914, 935, 1364, 1454
FaqI	GGGAC	2 cut(s)	976, 1027
FatI	CATG	6 cut(s)	102, 240, 910, 931, 1360, 1450
FauI	CCCGC	3 cut(s)	122, 136, 328
FauNDI	CATATG	1 cut(s)	1342
FblI	GTMKAC	2 cut(s)	666, 1507
FokI	GGATG	4 cut(s)	48, 311, 747, 1293
FspBI	CTAG	5 cut(s)	90, 449, 738, 996, 1152
GlaI	GCGC	2 cut(s)	866, 1503
GsuI	CTGGAG	1 cut(s)	255
HaeII	RGCGCY	1 cut(s)	868
HaeIII	GGCC	2 cut(s)	166, 807
HgaI	GACGC	3 cut(s)	442, 839, 1493
HhaI	GCGC	2 cut(s)	867, 1504
Hin1II	CATG	6 cut(s)	106, 244, 914, 935, 1364, 1454
Hin6I	GCGC	2 cut(s)	865, 1502
HinP1I	GCGC	2 cut(s)	865, 1502
HincII	GTYRAC	1 cut(s)	667
HindII	GTYRAC	1 cut(s)	667
HinfI	GANTC	8 cut(s)	172, 386, 590, 611, 875, 907, 992, 1155
HphI	GGTGA	3 cut(s)	730, 845, 916
Hpy166II	GTNNAC	3 cut(s)	39, 667, 1508
Hpy188I	TCNGA	8 cut(s)	196, 537, 580, 606, 619, 634, 1117, 1137
Hpy188III	TCNNGA	7 cut(s)	120, 322, 778, 879, 911, 989, 1361
Hpy8I	GTNNAC	3 cut(s)	39, 667, 1508
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	2 cut(s)	715, 953
HpyCH4III	ACNGT	4 cut(s)	664, 686, 1025, 1141
HpyCH4IV	ACGT	5 cut(s)	41, 518, 1291, 1299, 1510
HpyCH4V	TGCA	6 cut(s)	210, 756, 1165, 1269, 1284, 1412
HpyF10VI	GCNNNNNNNGC	3 cut(s)	260, 1117, 1501
HpyF3I	CTNAG	7 cut(s)	222, 465, 861, 916, 978, 1421, 1456
HpySE526I	ACGT	5 cut(s)	41, 518, 1291, 1299, 1510
Hsp92II	CATG	6 cut(s)	106, 244, 914, 935, 1364, 1454
HspAI	GCGC	2 cut(s)	865, 1502
Kpn2I	TCCGGA	1 cut(s)	119
KspI	CCGCGG	1 cut(s)	86
Kzo9I	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
LmnI	GCTCC	3 cut(s)	236, 419, 1254
Lsp1109I	GCAGC	6 cut(s)	40, 213, 1069, 1322, 1398, 1409
LweI	GCATC	6 cut(s)	70, 561, 769, 1030, 1271, 1421
MaeI	CTAG	5 cut(s)	90, 449, 738, 996, 1152
MaeII	ACGT	5 cut(s)	41, 518, 1291, 1299, 1510
MaeIII	GTNAC	5 cut(s)	457, 598, 686, 1019, 1141
MalI	GATC	6 cut(s)	539, 643, 1185, 1320, 1426, 1473
MboI	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
MfeI	CAATTG	1 cut(s)	691
MflI	RGATCY	3 cut(s)	641, 1318, 1471
MlsI	TGGCCA	1 cut(s)	807
MluCI	AATT	2 cut(s)	289, 691
MluNI	TGGCCA	1 cut(s)	807
MlyI	GAGTC	2 cut(s)	166, 380
MmeI	TCCRAC	1 cut(s)	1015
MnlI	CCTC	9 cut(s)	66, 389, 392, 864, 1021, 1096, 1339, 1465, 1485
Mox20I	TGGCCA	1 cut(s)	807
Mph1103I	ATGCAT	1 cut(s)	1414
MroI	TCCGGA	1 cut(s)	119
MscI	TGGCCA	1 cut(s)	807
MseI	TTAA	2 cut(s)	108, 1514
MslI	CAYNNNNRTG	1 cut(s)	1359
Msp20I	TGGCCA	1 cut(s)	807
MspA1I	CMGCKG	3 cut(s)	85, 226, 355
MspR9I	CCNGG	8 cut(s)	162, 295, 393, 411, 566, 1277, 1436, 1437
MunI	CAATTG	1 cut(s)	691
Mva1269I	GAATGC	1 cut(s)	1111
MvaI	CCWGG	2 cut(s)	566, 1277
MvnI	CGCG	2 cut(s)	85, 1504
MwoI	GCNNNNNNNGC	3 cut(s)	260, 1117, 1501
NciI	CCSGG	6 cut(s)	162, 295, 393, 411, 1436, 1437
NdeI	CATATG	1 cut(s)	1342
NdeII	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
NlaIII	CATG	6 cut(s)	106, 244, 914, 935, 1364, 1454
NlaIV	GGNNCC	4 cut(s)	165, 238, 421, 1473
NmuCI	GTSAC	4 cut(s)	457, 598, 1019, 1141
NsiI	ATGCAT	1 cut(s)	1414
NspI	RCATGY	1 cut(s)	1454
PaeI	GCATGC	1 cut(s)	1454
PagI	TCATGA	2 cut(s)	910, 1360
PaqCI	CACCTGC	1 cut(s)	706
PctI	GAATGC	1 cut(s)	1111
PfeI	GAWTC	6 cut(s)	590, 611, 875, 907, 992, 1155
PinAI	ACCGGT	1 cut(s)	1203
PleI	GAGTC	2 cut(s)	166, 380
PpsI	GAGTC	2 cut(s)	166, 380
Ppu21I	YACGTR	2 cut(s)	1292, 1300
PshAI	GACNNNNGTC	1 cut(s)	355
PsiI	TTATAA	1 cut(s)	1263
Psp6I	CCWGG	2 cut(s)	564, 1275
PspGI	CCWGG	2 cut(s)	564, 1275
PspN4I	GGNNCC	4 cut(s)	165, 238, 421, 1473
PspPI	GGNCC	3 cut(s)	164, 329, 350
PstNI	CAGNNNCTG	1 cut(s)	229
PsuI	RGATCY	3 cut(s)	641, 1318, 1471
PvuII	CAGCTG	1 cut(s)	226
RsaI	GTAC	3 cut(s)	553, 1290, 1368
RsaNI	GTAC	3 cut(s)	552, 1289, 1367
RseI	CAYNNNNRTG	1 cut(s)	1359
SacII	CCGCGG	1 cut(s)	86
SalI	GTCGAC	1 cut(s)	665
SaqAI	TTAA	2 cut(s)	108, 1514
Sau3AI	GATC	6 cut(s)	537, 641, 1183, 1318, 1424, 1471
Sau96I	GGNCC	3 cut(s)	164, 329, 350
SchI	GAGTC	2 cut(s)	166, 380
ScrFI	CCNGG	8 cut(s)	162, 295, 393, 411, 566, 1277, 1436, 1437
SfaNI	GCATC	6 cut(s)	70, 561, 769, 1030, 1271, 1421
SfcI	CTRYAG	1 cut(s)	1497
Sfr303I	CCGCGG	1 cut(s)	86
SgrBI	CCGCGG	1 cut(s)	86
SinI	GGWCC	2 cut(s)	329, 350
SmaI	CCCGGG	1 cut(s)	1437
SmiMI	CAYNNNNRTG	1 cut(s)	1359
SmlI	CTYRAG	1 cut(s)	453
SmoI	CTYRAG	1 cut(s)	453
SnaBI	TACGTA	1 cut(s)	1292
SpeI	ACTAGT	1 cut(s)	89
SphI	GCATGC	1 cut(s)	1454
Sse9I	AATT	2 cut(s)	289, 691
SspMI	CTAG	5 cut(s)	90, 449, 738, 996, 1152
StyD4I	CCNGG	8 cut(s)	160, 293, 391, 409, 564, 1275, 1434, 1435
StyI	CCWWGG	1 cut(s)	1250
TaaI	ACNGT	4 cut(s)	664, 686, 1025, 1141
TaiI	ACGT	5 cut(s)	44, 521, 1294, 1302, 1513
TaqI	TCGA	4 cut(s)	182, 344, 384, 666
TasI	AATT	2 cut(s)	289, 691
TatI	WGTACW	1 cut(s)	551
TauI	GCSGC	5 cut(s)	34, 82, 85, 266, 277
TfiI	GAWTC	6 cut(s)	590, 611, 875, 907, 992, 1155
Tru1I	TTAA	2 cut(s)	108, 1514
Tru9I	TTAA	2 cut(s)	108, 1514
TscAI	CASTG	3 cut(s)	313, 1030, 1180
TseFI	GTSAC	4 cut(s)	457, 598, 1019, 1141
TseI	GCWGC	6 cut(s)	28, 226, 1082, 1310, 1386, 1397
Tsp45I	GTSAC	4 cut(s)	457, 598, 1019, 1141
TspDTI	ATGAA	6 cut(s)	485, 522, 645, 920, 1083, 1089
TspMI	CCCGGG	1 cut(s)	1435
TspRI	CASTG	3 cut(s)	313, 1030, 1180
VpaK11BI	GGWCC	2 cut(s)	329, 350
XapI	RAATTY	1 cut(s)	289
XceI	RCATGY	1 cut(s)	1454
XcmI	CCANNNNNNNNNTGG	2 cut(s)	932, 1007
XmaI	CCCGGG	1 cut(s)	1435
XmiI	GTMKAC	2 cut(s)	666, 1507
XspI	CTAG	5 cut(s)	90, 449, 738, 996, 1152
Zsp2I	ATGCAT	1 cut(s)	1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.