Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007326

Physical Location & Seq

Genomic Coordinates Forward (+)

61491273 .. 61494348

Gene Structure 3076 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40711

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCTGGAAACGAAGAAGAACACCGGCAGCCGCCCTCCACGTCGTCATCGGCACCGTCATCTCGTCCTCCGCATCCCACGATTACTCTGCCGCCGCGGACTTGTTTTGAGACGATGTTTAACAACAACAACTCCGGAACAGGCGGGAATACTGGGGCGGGCTTGGGGTTCAGTCCGGGGCCGATGACTCTGGTTTCGAGCTTCTTCTCTGATGGGGAAGACTGCAAGTCGTTTTCTCAGCTGCTGGCTGGAGCCATGCTGTCTCCGGCGGACAGGGCGGCGTTTCCGCCGCTTGAAGACAGGAATTCCGGGGATGACAGCAGTGATTTCCGGTTCAAGAATGGACCGGCGGGTATGTCGATTGGACCGCTGTCGCCGATGTTTCCGGCTGGTTTCCTCGACTCGCCGGGAGGACTATTCTCGCCCGGACAGGGAGCCTTTGGAATGACGCACCAGCAGGCACTAGCTCAAGTGACAGCTCAGGCTTCACAATCCCAATCCTACACTTTTCATATCCCAAATGAACACTCTACGTCTAAAACACAGCTTCCGATCTTTACTTCCAGTACAACACCACCCCAGGAGATGCCATCTGAAATACCCGATTCTGGGGTCACTCTGAAAGAATCGTCTGATATCTCACATTCGGAACAGAGATCCCAACCATCTTCATTGACTGTCGACAAGCCTAATGATGACGGTTACAATTGGCGGAAATATGGGCAGAAGCAGGTGAAGGGGAGTGAGTTTCCTAGAAGTTATTACAAATGCACGCATCCCAGTTGTCCAGTCAAGAAAAAGGTTGAACGCTCGGTTGATGGCCAGATAACTGAAATCATTTACAAGGGTGAGCATAACCATCAGCGTCCTCAATCTAAGCGCCCAAAGGATTCTGGAAATCAAAATGGAAATGTTCAGGTGAATCATGACTTAGCTTCCCAAGTTCATGGTGGGAACTTGAACAAATCGAAAGAAGGGACTTATTCAATGTCTAAGCTGGGTCAGGAATCTAGCCAAGCAATATCTGGGACAAGTGACAGTGAGGAAGTTGGAGATGCTGAAACAAAAGTAGAAGAAAAAGATGAAGATGAACCTGCTGCCAAGAGACGAAATATGGAGGTCAGGCATTCAGAGCCAGCTTCTTCTCATCGGACTGTGACAGAGCCTAGAATCATAGTGCAGACAACCAGTGAAGTTGATCTGTTAGATGATGGCTACCGGTGGCGAAAGTATGGGCAGAAAGTTGTCAAAGGCAATCCTTATCCAAGGAGCTATTATAAATGCACATTCCAGGGATGCAATGTACGTAAGCACGTAGAGAGAGCAGCAACAGATCCTAAAGCCGTCATAACAACATATGAGGGCAAACATAATCATGATGTACCTGCTTCTAAATCTGGCAGCCACTATGCAGCCAACAACAATGCATCAAATCTAAGATCAGGCAACCCGGGAACTGAAAAGCATGCCTCAGTTAGCAAGATGGATCCTCGAAACAATGACCAACAGCATGTAGCGCGTCTACGTTTAAAAGAAGAACAAATAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043901 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1900150 GO:1900424 GO:1900425 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

516

Amino Acids

56.37

Weight (kDa)

6.84

Isoelectric Point (pI)

57.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	232 - 288	1e-27	WRKY DNA -binding domain
WRKY	PF03106	403 - 460	9.4e-27	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13960 AT1G13960 AT2G03340
fragaria_vesca	FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 FvH4_4g30640
malus_domestica	MD13G1067600.v1.1 MD16G1066500.v1.1
prunus_persica	Prupe.1G280700_v2.0.a1 Prupe.1G280700_v2.0.a1
pyrus_communis	pycom13g05940 pycom16g05790
rosa_chinensis	RchiOBHm_Chr4g0439041
rosa_laevigata	RLG00000006307
rosa_multiflora	Rmu_sc0001338.1_g000004 Rmu_sc0003226.1_g000090
rosa_roxburghii	Rroxscaffold_5G00380040
rosa_rugosa	Rorug04G0315200
rosa_samantha	Rh4AG365900 Rh4BG377200 Rh4CG391300 Rh4DG371900
rosa_wichuraiana	Rw0G007420 Rw0G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1278
AarI	CACCTGC	1 cut(s)	721
Acc36I	ACCTGC	3 cut(s)	721, 1102, 1393
AccB1I	GGYRCC	1 cut(s)	52
AccI	GTMKAC	2 cut(s)	681, 1522
AccII	CGCG	2 cut(s)	97, 1519
AccIII	TCCGGA	1 cut(s)	134
AclWI	GGATC	4 cut(s)	651, 1328, 1481, 1494
AcoI	YGGCCR	1 cut(s)	820
AcsI	RAATTY	1 cut(s)	304
AfaI	GTAC	3 cut(s)	568, 1305, 1383
AfiI	CCNNNNNNNGG	3 cut(s)	431, 608, 609
AgeI	ACCGGT	1 cut(s)	1218
AgsI	TTSAA	5 cut(s)	296, 337, 806, 961, 987
AhdI	GACNNNNNGTC	1 cut(s)	226
AjiI	CACGTC	1 cut(s)	42
AjnI	CCWGG	2 cut(s)	579, 1290
AluBI	AGCT	9 cut(s)	201, 241, 467, 479, 547, 935, 997, 1139, 1272
AluI	AGCT	9 cut(s)	201, 241, 467, 479, 547, 935, 997, 1139, 1272
Alw26I	GTCTC	3 cut(s)	104, 267, 1099
AlwI	GGATC	4 cut(s)	651, 1328, 1481, 1494
AlwNI	CAGNNNCTG	1 cut(s)	244
Ama87I	CYCGRG	1 cut(s)	1450
Aor13HI	TCCGGA	1 cut(s)	134
AoxI	GGCC	2 cut(s)	179, 820
ApeKI	GCWGC	6 cut(s)	28, 241, 1097, 1325, 1401, 1412
ApoI	RAATTY	1 cut(s)	304
ArsI	GACNNNNNNTTYG	2 cut(s)	178, 210
AsiGI	ACCGGT	1 cut(s)	1218
AspLEI	GCGC	2 cut(s)	882, 1519
AspS9I	GGNCC	3 cut(s)	179, 344, 365
AsuC2I	CCSGG	6 cut(s)	177, 310, 408, 426, 1451, 1452
AsuHPI	GGTGA	3 cut(s)	745, 860, 931
AvaI	CYCGRG	1 cut(s)	1450
AvaII	GGWCC	2 cut(s)	344, 365
BalI	TGGCCA	1 cut(s)	822
BamHI	GGATCC	1 cut(s)	1486
BanI	GGYRCC	1 cut(s)	52
BbsI	GAAGAC	2 cut(s)	225, 303
BbvI	GCAGC	6 cut(s)	40, 228, 1084, 1337, 1413, 1424
BccI	CCATC	7 cut(s)	206, 598, 673, 812, 867, 1205, 1477
BceAI	ACGGC	1 cut(s)	1328
BcgI	CGANNNNNNTGC	2 cut(s)	70, 104
BciT130I	CCWGG	2 cut(s)	581, 1292
BcnI	CCSGG	6 cut(s)	177, 310, 408, 426, 1451, 1452
BcoDI	GTCTC	3 cut(s)	104, 267, 1099
BfaI	CTAG	4 cut(s)	464, 753, 1011, 1167
BfoI	RGCGCY	1 cut(s)	883
BfuAI	ACCTGC	3 cut(s)	721, 1102, 1393
Bme1390I	CCNGG	8 cut(s)	177, 310, 408, 426, 581, 1292, 1451, 1452
Bme18I	GGWCC	2 cut(s)	344, 365
BmeRI	GACNNNNNGTC	1 cut(s)	226
BmeT110I	CYCGRG	1 cut(s)	1450
BmgBI	CACGTC	1 cut(s)	42
BmgT120I	GGNCC	3 cut(s)	179, 344, 365
BmiI	GGNNCC	5 cut(s)	54, 180, 253, 436, 1488
BmrFI	CCNGG	8 cut(s)	177, 310, 408, 426, 581, 1292, 1451, 1452
BmrI	ACTGGG	2 cut(s)	162, 774
BmsI	GCATC	6 cut(s)	82, 576, 784, 1045, 1286, 1436
BmuI	ACTGGG	2 cut(s)	162, 774
BoxI	GACNNNNGTC	1 cut(s)	370
BpiI	GAAGAC	2 cut(s)	225, 303
BpmI	CTGGAG	1 cut(s)	270
Bpu10I	CCTNAGC	1 cut(s)	480
BpuEI	CTTGAG	1 cut(s)	453
BpuMI	CCSGG	6 cut(s)	177, 310, 408, 426, 1451, 1452
BsaAI	YACGTR	2 cut(s)	1307, 1315
BsaJI	CCNNGG	7 cut(s)	95, 176, 309, 579, 1265, 1291, 1450
BsaWI	WCCGGW	3 cut(s)	134, 330, 1218
BsaXI	ACNNNNNCTCC	2 cut(s)	116, 146
Bsc4I	CCNNNNNNNGG	3 cut(s)	431, 608, 609
Bse118I	RCCGGY	3 cut(s)	24, 346, 1218
Bse1I	ACTGG	5 cut(s)	157, 564, 780, 788, 1188
Bse3DI	GCAATG	1 cut(s)	1306
BseAI	TCCGGA	1 cut(s)	134
BseBI	CCWGG	2 cut(s)	581, 1292
BseDI	CCNNGG	7 cut(s)	95, 176, 309, 579, 1265, 1291, 1450
BseGI	GGATG	4 cut(s)	73, 319, 775, 1301
BseLI	CCNNNNNNNGG	3 cut(s)	431, 608, 609
BseMI	GCAATG	1 cut(s)	1306
BseMII	CTCAG	3 cut(s)	251, 494, 1485
BseNI	ACTGG	5 cut(s)	157, 564, 780, 788, 1188
BseXI	GCAGC	6 cut(s)	40, 228, 1084, 1337, 1413, 1424
BseYI	CCCAGC	1 cut(s)	997
BsgI	GTGCAG	1 cut(s)	1199
Bsh1236I	CGCG	2 cut(s)	97, 1519
BshFI	GGCC	2 cut(s)	181, 822
BshNI	GGYRCC	1 cut(s)	52
BshTI	ACCGGT	1 cut(s)	1218
BsiHKCI	CYCGRG	1 cut(s)	1450
BslFI	GGGAC	2 cut(s)	991, 1042
BslI	CCNNNNNNNGG	3 cut(s)	431, 608, 609
BsmAI	GTCTC	3 cut(s)	104, 267, 1099
BsmBI	CGTCTC	2 cut(s)	104, 1099
BsmFI	GGGAC	2 cut(s)	991, 1042
BsmI	GAATGC	1 cut(s)	1126
BsnI	GGCC	2 cut(s)	181, 822
BsoBI	CYCGRG	1 cut(s)	1450
Bsp13I	TCCGGA	1 cut(s)	134
Bsp143I	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
BspANI	GGCC	2 cut(s)	181, 822
BspCNI	CTCAG	3 cut(s)	250, 493, 1484
BspEI	TCCGGA	1 cut(s)	134
BspFNI	CGCG	2 cut(s)	97, 1519
BspHI	TCATGA	2 cut(s)	925, 1375
BspLI	GGNNCC	5 cut(s)	54, 180, 253, 436, 1488
BspMI	ACCTGC	3 cut(s)	721, 1102, 1393
BspPI	GGATC	4 cut(s)	651, 1328, 1481, 1494
BspT107I	GGYRCC	1 cut(s)	52
BsrDI	GCAATG	1 cut(s)	1306
BsrFI	RCCGGY	3 cut(s)	24, 346, 1218
BsrI	ACTGG	5 cut(s)	157, 564, 780, 788, 1188
BssAI	RCCGGY	3 cut(s)	24, 346, 1218
BssECI	CCNNGG	7 cut(s)	95, 176, 309, 579, 1265, 1291, 1450
BssMI	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
BssT1I	CCWWGG	1 cut(s)	1265
Bst2UI	CCWGG	2 cut(s)	581, 1292
Bst4CI	ACNGT	5 cut(s)	57, 679, 701, 1040, 1156
BstBAI	YACGTR	2 cut(s)	1307, 1315
BstC8I	GCNNGC	6 cut(s)	160, 246, 459, 773, 1137, 1467
BstDEI	CTNAG	7 cut(s)	237, 480, 876, 931, 993, 1436, 1471
BstDSI	CCRYGG	1 cut(s)	95
BstF5I	GGATG	4 cut(s)	73, 319, 775, 1301
BstFNI	CGCG	2 cut(s)	97, 1519
BstH2I	RGCGCY	1 cut(s)	883
BstHHI	GCGC	2 cut(s)	882, 1519
BstKTI	GATC	6 cut(s)	555, 659, 1201, 1336, 1442, 1489
BstMAI	GTCTC	3 cut(s)	104, 267, 1099
BstMBI	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
BstMWI	GCNNNNNNNGC	3 cut(s)	275, 1132, 1516
BstNI	CCWGG	2 cut(s)	581, 1292
BstNSI	RCATGY	2 cut(s)	1469, 1514
BstPAI	GACNNNNGTC	1 cut(s)	370
BstSCI	CCNGG	8 cut(s)	175, 308, 406, 424, 579, 1290, 1449, 1450
BstSNI	TACGTA	1 cut(s)	1307
BstUI	CGCG	2 cut(s)	97, 1519
BstV1I	GCAGC	6 cut(s)	40, 228, 1084, 1337, 1413, 1424
BstV2I	GAAGAC	2 cut(s)	225, 303
BstX2I	RGATCY	3 cut(s)	656, 1333, 1486
BstXI	CCANNNNNNTGG	1 cut(s)	947
BstYI	RGATCY	3 cut(s)	656, 1333, 1486
BsuRI	GGCC	2 cut(s)	181, 822
BtgI	CCRYGG	1 cut(s)	95
BtrI	CACGTC	1 cut(s)	42
BtsCI	GGATG	4 cut(s)	73, 319, 775, 1301
BtsI	GCAGTG	1 cut(s)	328
BtsIMutI	CAGTG	3 cut(s)	328, 1045, 1195
BveI	ACCTGC	3 cut(s)	721, 1102, 1393
Cac8I	GCNNGC	6 cut(s)	160, 246, 459, 773, 1137, 1467
CaiI	CAGNNNCTG	1 cut(s)	244
CciI	TCATGA	2 cut(s)	925, 1375
CfoI	GCGC	2 cut(s)	882, 1519
Cfr10I	RCCGGY	3 cut(s)	24, 346, 1218
Cfr13I	GGNCC	3 cut(s)	179, 344, 365
Cfr42I	CCGCGG	1 cut(s)	98
Cfr9I	CCCGGG	1 cut(s)	1450
CseI	GACGC	3 cut(s)	457, 854, 1508
Csp6I	GTAC	3 cut(s)	567, 1304, 1382
CspAI	ACCGGT	1 cut(s)	1218
CviAII	CATG	6 cut(s)	256, 926, 947, 1376, 1466, 1511
CviQI	GTAC	3 cut(s)	567, 1304, 1382
DdeI	CTNAG	7 cut(s)	237, 480, 876, 931, 993, 1436, 1471
DpnI	GATC	6 cut(s)	554, 658, 1200, 1335, 1441, 1488
DpnII	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
DraI	TTTAAA	1 cut(s)	1530
DriI	GACNNNNNGTC	1 cut(s)	226
EaeI	YGGCCR	1 cut(s)	820
Eam1105I	GACNNNNNGTC	1 cut(s)	226
EciI	GGCGGA	3 cut(s)	276, 284, 727
Eco105I	TACGTA	1 cut(s)	1307
Eco130I	CCWWGG	1 cut(s)	1265
Eco32I	GATATC	1 cut(s)	637
Eco47I	GGWCC	2 cut(s)	344, 365
Eco88I	CYCGRG	1 cut(s)	1450
EcoRI	GAATTC	1 cut(s)	304
EcoRII	CCWGG	2 cut(s)	579, 1290
EcoRV	GATATC	1 cut(s)	637
EcoT14I	CCWWGG	1 cut(s)	1265
EcoT22I	ATGCAT	1 cut(s)	1429
ErhI	CCWWGG	1 cut(s)	1265
Esp3I	CGTCTC	2 cut(s)	104, 1099
FaeI	CATG	6 cut(s)	259, 929, 950, 1379, 1469, 1514
FaqI	GGGAC	2 cut(s)	991, 1042
FatI	CATG	6 cut(s)	255, 925, 946, 1375, 1465, 1510
FauI	CCCGC	3 cut(s)	137, 151, 343
FauNDI	CATATG	1 cut(s)	1357
FblI	GTMKAC	2 cut(s)	681, 1522
FokI	GGATG	4 cut(s)	60, 326, 762, 1308
FspBI	CTAG	4 cut(s)	464, 753, 1011, 1167
GlaI	GCGC	2 cut(s)	881, 1518
GsaI	CCCAGC	1 cut(s)	1001
GsuI	CTGGAG	1 cut(s)	270
HaeII	RGCGCY	1 cut(s)	883
HaeIII	GGCC	2 cut(s)	181, 822
HgaI	GACGC	3 cut(s)	457, 854, 1508
HhaI	GCGC	2 cut(s)	882, 1519
Hin1II	CATG	6 cut(s)	259, 929, 950, 1379, 1469, 1514
Hin6I	GCGC	2 cut(s)	880, 1517
HinP1I	GCGC	2 cut(s)	880, 1517
HincII	GTYRAC	1 cut(s)	682
HindII	GTYRAC	1 cut(s)	682
HinfI	GANTC	8 cut(s)	187, 401, 605, 626, 890, 922, 1007, 1170
HphI	GGTGA	3 cut(s)	745, 860, 931
Hpy166II	GTNNAC	2 cut(s)	682, 1523
Hpy188I	TCNGA	8 cut(s)	211, 552, 595, 621, 634, 649, 1132, 1152
Hpy188III	TCNNGA	7 cut(s)	135, 337, 793, 894, 926, 1004, 1376
Hpy8I	GTNNAC	2 cut(s)	682, 1523
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	2 cut(s)	730, 968
HpyCH4III	ACNGT	5 cut(s)	57, 679, 701, 1040, 1156
HpyCH4IV	ACGT	5 cut(s)	41, 533, 1306, 1314, 1525
HpyCH4V	TGCA	7 cut(s)	225, 771, 1180, 1284, 1299, 1412, 1427
HpyF10VI	GCNNNNNNNGC	3 cut(s)	275, 1132, 1516
HpyF3I	CTNAG	7 cut(s)	237, 480, 876, 931, 993, 1436, 1471
HpySE526I	ACGT	5 cut(s)	41, 533, 1306, 1314, 1525
Hsp92II	CATG	6 cut(s)	259, 929, 950, 1379, 1469, 1514
HspAI	GCGC	2 cut(s)	880, 1517
Kpn2I	TCCGGA	1 cut(s)	134
KspI	CCGCGG	1 cut(s)	98
Kzo9I	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
LmnI	GCTCC	3 cut(s)	251, 434, 1269
Lsp1109I	GCAGC	6 cut(s)	40, 228, 1084, 1337, 1413, 1424
LweI	GCATC	6 cut(s)	82, 576, 784, 1045, 1286, 1436
MaeI	CTAG	4 cut(s)	464, 753, 1011, 1167
MaeII	ACGT	5 cut(s)	41, 533, 1306, 1314, 1525
MaeIII	GTNAC	5 cut(s)	472, 613, 701, 1034, 1156
MalI	GATC	6 cut(s)	554, 658, 1200, 1335, 1441, 1488
MboI	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
MfeI	CAATTG	1 cut(s)	706
MflI	RGATCY	3 cut(s)	656, 1333, 1486
MlsI	TGGCCA	1 cut(s)	822
MluCI	AATT	2 cut(s)	304, 706
MluNI	TGGCCA	1 cut(s)	822
MlyI	GAGTC	2 cut(s)	181, 395
MmeI	TCCRAC	1 cut(s)	1030
Mox20I	TGGCCA	1 cut(s)	822
Mph1103I	ATGCAT	1 cut(s)	1429
MroI	TCCGGA	1 cut(s)	134
MscI	TGGCCA	1 cut(s)	822
MseI	TTAA	2 cut(s)	120, 1529
MslI	CAYNNNNRTG	1 cut(s)	1374
Msp20I	TGGCCA	1 cut(s)	822
MspA1I	CMGCKG	3 cut(s)	97, 241, 370
MspR9I	CCNGG	8 cut(s)	177, 310, 408, 426, 581, 1292, 1451, 1452
MunI	CAATTG	1 cut(s)	706
Mva1269I	GAATGC	1 cut(s)	1126
MvaI	CCWGG	2 cut(s)	581, 1292
MvnI	CGCG	2 cut(s)	97, 1519
MwoI	GCNNNNNNNGC	3 cut(s)	275, 1132, 1516
NciI	CCSGG	6 cut(s)	177, 310, 408, 426, 1451, 1452
NdeI	CATATG	1 cut(s)	1357
NdeII	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
NlaIII	CATG	6 cut(s)	259, 929, 950, 1379, 1469, 1514
NlaIV	GGNNCC	5 cut(s)	54, 180, 253, 436, 1488
NmuCI	GTSAC	4 cut(s)	472, 613, 1034, 1156
NsiI	ATGCAT	1 cut(s)	1429
NspI	RCATGY	2 cut(s)	1469, 1514
PaeI	GCATGC	1 cut(s)	1469
PagI	TCATGA	2 cut(s)	925, 1375
PaqCI	CACCTGC	1 cut(s)	721
PctI	GAATGC	1 cut(s)	1126
PfeI	GAWTC	6 cut(s)	605, 626, 890, 922, 1007, 1170
PinAI	ACCGGT	1 cut(s)	1218
PleI	GAGTC	2 cut(s)	181, 395
PpsI	GAGTC	2 cut(s)	181, 395
Ppu21I	YACGTR	2 cut(s)	1307, 1315
PshAI	GACNNNNGTC	1 cut(s)	370
PsiI	TTATAA	1 cut(s)	1278
Psp6I	CCWGG	2 cut(s)	579, 1290
PspFI	CCCAGC	1 cut(s)	997
PspGI	CCWGG	2 cut(s)	579, 1290
PspN4I	GGNNCC	5 cut(s)	54, 180, 253, 436, 1488
PspPI	GGNCC	3 cut(s)	179, 344, 365
PstNI	CAGNNNCTG	1 cut(s)	244
PsuI	RGATCY	3 cut(s)	656, 1333, 1486
PvuII	CAGCTG	1 cut(s)	241
RsaI	GTAC	3 cut(s)	568, 1305, 1383
RsaNI	GTAC	3 cut(s)	567, 1304, 1382
RseI	CAYNNNNRTG	1 cut(s)	1374
SacII	CCGCGG	1 cut(s)	98
SalI	GTCGAC	1 cut(s)	680
SaqAI	TTAA	2 cut(s)	120, 1529
Sau3AI	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
Sau96I	GGNCC	3 cut(s)	179, 344, 365
SchI	GAGTC	2 cut(s)	181, 395
ScrFI	CCNGG	8 cut(s)	177, 310, 408, 426, 581, 1292, 1451, 1452
SfaNI	GCATC	6 cut(s)	82, 576, 784, 1045, 1286, 1436
Sfr303I	CCGCGG	1 cut(s)	98
SgrBI	CCGCGG	1 cut(s)	98
SinI	GGWCC	2 cut(s)	344, 365
SmaI	CCCGGG	1 cut(s)	1452
SmiMI	CAYNNNNRTG	1 cut(s)	1374
SmlI	CTYRAG	1 cut(s)	468
SmoI	CTYRAG	1 cut(s)	468
SnaBI	TACGTA	1 cut(s)	1307
SphI	GCATGC	1 cut(s)	1469
Sse9I	AATT	2 cut(s)	304, 706
SspMI	CTAG	4 cut(s)	464, 753, 1011, 1167
StyD4I	CCNGG	8 cut(s)	175, 308, 406, 424, 579, 1290, 1449, 1450
StyI	CCWWGG	1 cut(s)	1265
TaaI	ACNGT	5 cut(s)	57, 679, 701, 1040, 1156
TaiI	ACGT	5 cut(s)	44, 536, 1309, 1317, 1528
TaqI	TCGA	6 cut(s)	197, 359, 399, 681, 968, 1492
TasI	AATT	2 cut(s)	304, 706
TatI	WGTACW	1 cut(s)	566
TauI	GCSGC	5 cut(s)	34, 94, 97, 281, 292
TfiI	GAWTC	6 cut(s)	605, 626, 890, 922, 1007, 1170
Tru1I	TTAA	2 cut(s)	120, 1529
Tru9I	TTAA	2 cut(s)	120, 1529
TscAI	CASTG	3 cut(s)	328, 1045, 1195
TseFI	GTSAC	4 cut(s)	472, 613, 1034, 1156
TseI	GCWGC	6 cut(s)	28, 241, 1097, 1325, 1401, 1412
Tsp45I	GTSAC	4 cut(s)	472, 613, 1034, 1156
TspDTI	ATGAA	6 cut(s)	500, 537, 660, 935, 1098, 1104
TspMI	CCCGGG	1 cut(s)	1450
TspRI	CASTG	3 cut(s)	328, 1045, 1195
VpaK11BI	GGWCC	2 cut(s)	344, 365
XapI	RAATTY	1 cut(s)	304
XceI	RCATGY	2 cut(s)	1469, 1514
XcmI	CCANNNNNNNNNTGG	2 cut(s)	947, 1022
XmaI	CCCGGG	1 cut(s)	1450
XmiI	GTMKAC	2 cut(s)	681, 1522
XspI	CTAG	4 cut(s)	464, 753, 1011, 1167
Zsp2I	ATGCAT	1 cut(s)	1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.