Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0007326

Physical Location & Seq

Genomic Coordinates Reverse (-)

6165161 .. 6168128

Gene Structure 2968 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006307

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGCTGGAAGCGAAGAAGAACACCGGCAGCCGCCGTCCACGTCGTCATCTCGTCCTCCGCATCCTTCGCGTCCCACGATTACTCTGCCGCCGCGGACTTGTTTTGAGACGATGCTTAACAACAACTCCGGAACAGGAGGCGGGAATACTGGGGAGGGCTTGGGGTTCAGTCCGGGGCCGATGACTCTGGTTTCGAGCTTCTTCTCTGATGGGGAAGACTGCAAGTCGTTCTCTCAGCTGCTGGCTGGAGCCATGCTGTCTCCGGCGGACAGGGCGGGGTTTCCGCCGCTTGAAGACAGGAATTCCGGGGATGACAGCAGTGATTTCCGGTTCAAGAATGGACCGGCGGGGATGTCGATTGGACCGCCGTCGCCGATGTTTCCGGCGGGTTTCCTCGACTCGCCGGGAGGACTATTCTCGCCCGGACAGGGAGCCTTTGGAATGACGCACCAGCAGGCACTAGCTCAAGTGACAGCTCAGGCTTCACAATCCCAATCCTACACTTTTCATATCCCAAATGAACACTCTGCGTCTATGACACAGCTTCCGATCTTTACTTCCAGTACAACACCACCCCAGGAGATGCCATCTGAAATACCCGATTCTGGGGTCACTCTGAAAGAATTGTCTGATATCTCACATTCAGAACAGAGATCCCAACCATCTTCATTGACTGTCGACAAGCCTAATGATGACGGTTACAATTGGCGAAAATATGGGCAGAAGCAGGTGAAGGGGAGTGAGTTTCCTAGAAGTTATTACAAATGCACGCAACCCAGTTGTCCAGTCAAGAAAAAGGTTGAACGCTCGGTTGATGGCCAGATAACTGAAATCATTTACAAGGGTGAGCATAACCATCAGCGTCCCCAATCTAAACGCCCAAAGGATTCTGGAAATCAAAATGGAAATGTTCAGGTGAATCATGACTTAGCTTCCCAAGTTCATGGTGGGAACTTGAACAAATCGAAAGAAGGGACTTATTCAATGTCTAAGCAGGGTCAGGAATCTAGCCAAGCAATATCTGGGACAAGTGACAGTGAGGAAGTTGGAGATGCTGAAACAAAAGTAGAAGAAAAAGATGAAGATGAACCTGCTCCCAAGAGACGAAATATGGAGGTCAGGCATCCAGAGCCAGCTTCTTCTCATCGGACTGTGACAGAGCCTAGAATCATAGTGCAGACAACCAGTGAAGTTGATCTGTTAGATGATGGCTACCGGTGGCGAAAGTATGGGCAGAAAGTTGTCAAAGGCAATCCTTATCCAAGGAGCTATTATAAATGCACATTCCAGGGATGCAATGTACGTAAGCACGTAGAGAGAGCAGCAACAGATCCTAAAGCCGTCATAACAACATATGAGGGCAAACATAATCATGATGTACCTGCTTCTAAATCTGGCAGCCACTACGCAGCCAACAACAATGCATCAAATCTAAGATCAGGCAACCCGGGAACTGAAAAGCATGCCTCAGTTAGCAAGATGGATCCTCGAAACAATGACCAACAGCCTGTAGCGCGTCTACGTTTAAAAGAAGAACAAATAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043901 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1900150 GO:1900424 GO:1900425 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

516

Amino Acids

56.28

Weight (kDa)

6.64

Isoelectric Point (pI)

60.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	231 - 287	2.1e-27	WRKY DNA -binding domain
WRKY	PF03106	402 - 459	9.4e-27	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13960 AT1G13960 AT2G03340
fragaria_vesca	FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 FvH4_4g30640
malus_domestica	MD13G1067600.v1.1 MD16G1066500.v1.1
prunus_persica	Prupe.1G280700_v2.0.a1 Prupe.1G280700_v2.0.a1
pyrus_communis	pycom13g05940 pycom16g05790
rosa_chinensis	RchiOBHm_Chr4g0439041
rosa_laevigata	RLG00000006307
rosa_multiflora	Rmu_sc0001338.1_g000004 Rmu_sc0003226.1_g000090
rosa_roxburghii	Rroxscaffold_5G00380040
rosa_rugosa	Rorug04G0315200
rosa_samantha	Rh4AG365900 Rh4BG377200 Rh4CG391300 Rh4DG371900
rosa_wichuraiana	Rw0G007420 Rw0G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1275
AarI	CACCTGC	1 cut(s)	718
Acc36I	ACCTGC	3 cut(s)	718, 1099, 1390
AccI	GTMKAC	2 cut(s)	678, 1519
AccII	CGCG	3 cut(s)	70, 94, 1516
AccIII	TCCGGA	1 cut(s)	128
AclWI	GGATC	4 cut(s)	648, 1325, 1478, 1491
AcoI	YGGCCR	1 cut(s)	817
AcsI	RAATTY	1 cut(s)	301
AfaI	GTAC	3 cut(s)	565, 1302, 1380
AfiI	CCNNNNNNNGG	3 cut(s)	428, 605, 606
AgeI	ACCGGT	1 cut(s)	1215
AgsI	TTSAA	5 cut(s)	293, 334, 803, 958, 984
AhdI	GACNNNNNGTC	1 cut(s)	223
AjiI	CACGTC	1 cut(s)	42
AjnI	CCWGG	2 cut(s)	576, 1287
AluBI	AGCT	8 cut(s)	198, 238, 464, 476, 544, 932, 1136, 1269
AluI	AGCT	8 cut(s)	198, 238, 464, 476, 544, 932, 1136, 1269
Alw26I	GTCTC	3 cut(s)	101, 264, 1096
AlwI	GGATC	4 cut(s)	648, 1325, 1478, 1491
AlwNI	CAGNNNCTG	1 cut(s)	241
Ama87I	CYCGRG	1 cut(s)	1447
Aor13HI	TCCGGA	1 cut(s)	128
AoxI	GGCC	2 cut(s)	176, 817
ApeKI	GCWGC	5 cut(s)	28, 238, 1322, 1398, 1409
ApoI	RAATTY	1 cut(s)	301
ArsI	GACNNNNNNTTYG	2 cut(s)	175, 207
AsiGI	ACCGGT	1 cut(s)	1215
AspLEI	GCGC	1 cut(s)	1516
AspS9I	GGNCC	3 cut(s)	176, 341, 362
AsuC2I	CCSGG	6 cut(s)	174, 307, 405, 423, 1448, 1449
AsuHPI	GGTGA	3 cut(s)	742, 857, 928
AvaI	CYCGRG	1 cut(s)	1447
AvaII	GGWCC	2 cut(s)	341, 362
BalI	TGGCCA	1 cut(s)	819
BamHI	GGATCC	1 cut(s)	1483
BbsI	GAAGAC	2 cut(s)	222, 300
BbvI	GCAGC	5 cut(s)	40, 225, 1334, 1410, 1421
BccI	CCATC	7 cut(s)	203, 595, 670, 809, 864, 1202, 1474
BceAI	ACGGC	3 cut(s)	19, 352, 1325
BcgI	CGANNNNNNTGC	2 cut(s)	67, 101
BciT130I	CCWGG	2 cut(s)	578, 1289
BcnI	CCSGG	6 cut(s)	174, 307, 405, 423, 1448, 1449
BcoDI	GTCTC	3 cut(s)	101, 264, 1096
BfaI	CTAG	4 cut(s)	461, 750, 1008, 1164
BfmI	CTRYAG	1 cut(s)	1509
BfuAI	ACCTGC	3 cut(s)	718, 1099, 1390
BisI	GCNGC	9 cut(s)	29, 32, 89, 92, 239, 287, 1323, 1399, 1410
BlsI	GCNGC	9 cut(s)	30, 33, 90, 93, 240, 288, 1324, 1400, 1411
Bme1390I	CCNGG	8 cut(s)	174, 307, 405, 423, 578, 1289, 1448, 1449
Bme18I	GGWCC	2 cut(s)	341, 362
BmeRI	GACNNNNNGTC	1 cut(s)	223
BmeT110I	CYCGRG	1 cut(s)	1447
BmgBI	CACGTC	1 cut(s)	42
BmgT120I	GGNCC	3 cut(s)	176, 341, 362
BmiI	GGNNCC	4 cut(s)	177, 250, 433, 1485
BmrFI	CCNGG	8 cut(s)	174, 307, 405, 423, 578, 1289, 1448, 1449
BmrI	ACTGGG	2 cut(s)	159, 771
BmsI	GCATC	7 cut(s)	70, 102, 573, 1042, 1132, 1283, 1433
BmuI	ACTGGG	2 cut(s)	159, 771
BoxI	GACNNNNGTC	1 cut(s)	367
BpiI	GAAGAC	2 cut(s)	222, 300
BpmI	CTGGAG	1 cut(s)	267
Bpu10I	CCTNAGC	1 cut(s)	477
BpuEI	CTTGAG	1 cut(s)	450
BpuMI	CCSGG	6 cut(s)	174, 307, 405, 423, 1448, 1449
BsaAI	YACGTR	2 cut(s)	1304, 1312
BsaJI	CCNNGG	7 cut(s)	92, 173, 306, 576, 1262, 1288, 1447
BsaWI	WCCGGW	3 cut(s)	128, 327, 1215
BsaXI	ACNNNNNCTCC	2 cut(s)	110, 140
Bsc4I	CCNNNNNNNGG	3 cut(s)	428, 605, 606
Bse118I	RCCGGY	3 cut(s)	24, 343, 1215
Bse1I	ACTGG	5 cut(s)	154, 561, 777, 785, 1185
Bse3DI	GCAATG	1 cut(s)	1303
BseAI	TCCGGA	1 cut(s)	128
BseBI	CCWGG	2 cut(s)	578, 1289
BseDI	CCNNGG	7 cut(s)	92, 173, 306, 576, 1262, 1288, 1447
BseGI	GGATG	5 cut(s)	61, 316, 357, 1123, 1298
BseLI	CCNNNNNNNGG	3 cut(s)	428, 605, 606
BseMI	GCAATG	1 cut(s)	1303
BseMII	CTCAG	3 cut(s)	248, 491, 1482
BseNI	ACTGG	5 cut(s)	154, 561, 777, 785, 1185
BseXI	GCAGC	5 cut(s)	40, 225, 1334, 1410, 1421
BsgI	GTGCAG	1 cut(s)	1196
Bsh1236I	CGCG	3 cut(s)	70, 94, 1516
BshFI	GGCC	2 cut(s)	178, 819
BshTI	ACCGGT	1 cut(s)	1215
BsiHKCI	CYCGRG	1 cut(s)	1447
BslFI	GGGAC	4 cut(s)	57, 849, 988, 1039
BslI	CCNNNNNNNGG	3 cut(s)	428, 605, 606
BsmAI	GTCTC	3 cut(s)	101, 264, 1096
BsmBI	CGTCTC	2 cut(s)	101, 1096
BsmFI	GGGAC	4 cut(s)	57, 849, 988, 1039
BsnI	GGCC	2 cut(s)	178, 819
BsoBI	CYCGRG	1 cut(s)	1447
Bsp13I	TCCGGA	1 cut(s)	128
Bsp143I	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
BspANI	GGCC	2 cut(s)	178, 819
BspCNI	CTCAG	3 cut(s)	247, 490, 1481
BspEI	TCCGGA	1 cut(s)	128
BspFNI	CGCG	3 cut(s)	70, 94, 1516
BspHI	TCATGA	2 cut(s)	922, 1372
BspLI	GGNNCC	4 cut(s)	177, 250, 433, 1485
BspMI	ACCTGC	3 cut(s)	718, 1099, 1390
BspPI	GGATC	4 cut(s)	648, 1325, 1478, 1491
BsrDI	GCAATG	1 cut(s)	1303
BsrFI	RCCGGY	3 cut(s)	24, 343, 1215
BsrI	ACTGG	5 cut(s)	154, 561, 777, 785, 1185
BssAI	RCCGGY	3 cut(s)	24, 343, 1215
BssECI	CCNNGG	7 cut(s)	92, 173, 306, 576, 1262, 1288, 1447
BssMI	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
BssT1I	CCWWGG	1 cut(s)	1262
Bst2UI	CCWGG	2 cut(s)	578, 1289
Bst4CI	ACNGT	4 cut(s)	676, 698, 1037, 1153
BstBAI	YACGTR	2 cut(s)	1304, 1312
BstC8I	GCNNGC	5 cut(s)	243, 456, 770, 1134, 1464
BstDEI	CTNAG	6 cut(s)	234, 477, 928, 990, 1433, 1468
BstDSI	CCRYGG	1 cut(s)	92
BstF5I	GGATG	5 cut(s)	61, 316, 357, 1123, 1298
BstFNI	CGCG	3 cut(s)	70, 94, 1516
BstHHI	GCGC	1 cut(s)	1516
BstKTI	GATC	6 cut(s)	552, 656, 1198, 1333, 1439, 1486
BstMAI	GTCTC	3 cut(s)	101, 264, 1096
BstMBI	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
BstMWI	GCNNNNNNNGC	4 cut(s)	67, 272, 1129, 1513
BstNI	CCWGG	2 cut(s)	578, 1289
BstNSI	RCATGY	1 cut(s)	1466
BstPAI	GACNNNNGTC	1 cut(s)	367
BstSCI	CCNGG	8 cut(s)	172, 305, 403, 421, 576, 1287, 1446, 1447
BstSFI	CTRYAG	1 cut(s)	1509
BstSNI	TACGTA	1 cut(s)	1304
BstUI	CGCG	3 cut(s)	70, 94, 1516
BstV1I	GCAGC	5 cut(s)	40, 225, 1334, 1410, 1421
BstV2I	GAAGAC	2 cut(s)	222, 300
BstX2I	RGATCY	3 cut(s)	653, 1330, 1483
BstXI	CCANNNNNNTGG	1 cut(s)	944
BstYI	RGATCY	3 cut(s)	653, 1330, 1483
BsuRI	GGCC	2 cut(s)	178, 819
BtgI	CCRYGG	1 cut(s)	92
BtrI	CACGTC	1 cut(s)	42
BtsCI	GGATG	5 cut(s)	61, 316, 357, 1123, 1298
BtsI	GCAGTG	1 cut(s)	325
BtsIMutI	CAGTG	3 cut(s)	325, 1042, 1192
BveI	ACCTGC	3 cut(s)	718, 1099, 1390
Cac8I	GCNNGC	5 cut(s)	243, 456, 770, 1134, 1464
CaiI	CAGNNNCTG	1 cut(s)	241
CciI	TCATGA	2 cut(s)	922, 1372
CfoI	GCGC	1 cut(s)	1516
Cfr10I	RCCGGY	3 cut(s)	24, 343, 1215
Cfr13I	GGNCC	3 cut(s)	176, 341, 362
Cfr42I	CCGCGG	1 cut(s)	95
Cfr9I	CCCGGG	1 cut(s)	1447
CseI	GACGC	5 cut(s)	59, 454, 519, 851, 1505
Csp6I	GTAC	3 cut(s)	564, 1301, 1379
CspAI	ACCGGT	1 cut(s)	1215
CviAII	CATG	5 cut(s)	253, 923, 944, 1373, 1463
CviQI	GTAC	3 cut(s)	564, 1301, 1379
DdeI	CTNAG	6 cut(s)	234, 477, 928, 990, 1433, 1468
DpnI	GATC	6 cut(s)	551, 655, 1197, 1332, 1438, 1485
DpnII	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
DraI	TTTAAA	1 cut(s)	1527
DriI	GACNNNNNGTC	1 cut(s)	223
EaeI	YGGCCR	1 cut(s)	817
Eam1105I	GACNNNNNGTC	1 cut(s)	223
EciI	GGCGGA	2 cut(s)	273, 281
Eco105I	TACGTA	1 cut(s)	1304
Eco130I	CCWWGG	1 cut(s)	1262
Eco32I	GATATC	1 cut(s)	634
Eco47I	GGWCC	2 cut(s)	341, 362
Eco88I	CYCGRG	1 cut(s)	1447
EcoRI	GAATTC	1 cut(s)	301
EcoRII	CCWGG	2 cut(s)	576, 1287
EcoRV	GATATC	1 cut(s)	634
EcoT14I	CCWWGG	1 cut(s)	1262
EcoT22I	ATGCAT	1 cut(s)	1426
ErhI	CCWWGG	1 cut(s)	1262
Esp3I	CGTCTC	2 cut(s)	101, 1096
FaeI	CATG	5 cut(s)	256, 926, 947, 1376, 1466
FaqI	GGGAC	4 cut(s)	57, 849, 988, 1039
FatI	CATG	5 cut(s)	252, 922, 943, 1372, 1462
FauI	CCCGC	4 cut(s)	134, 268, 340, 379
FauNDI	CATATG	1 cut(s)	1354
FblI	GTMKAC	2 cut(s)	678, 1519
Fnu4HI	GCNGC	9 cut(s)	29, 32, 89, 92, 239, 287, 1323, 1399, 1410
FokI	GGATG	5 cut(s)	48, 323, 364, 1110, 1305
Fsp4HI	GCNGC	9 cut(s)	29, 32, 89, 92, 239, 287, 1323, 1399, 1410
FspBI	CTAG	4 cut(s)	461, 750, 1008, 1164
GlaI	GCGC	1 cut(s)	1515
GluI	GCNGC	9 cut(s)	29, 32, 89, 92, 239, 287, 1323, 1399, 1410
GsuI	CTGGAG	1 cut(s)	267
HaeIII	GGCC	2 cut(s)	178, 819
HgaI	GACGC	5 cut(s)	59, 454, 519, 851, 1505
HhaI	GCGC	1 cut(s)	1516
Hin1II	CATG	5 cut(s)	256, 926, 947, 1376, 1466
Hin6I	GCGC	1 cut(s)	1514
HinP1I	GCGC	1 cut(s)	1514
HincII	GTYRAC	1 cut(s)	679
HindII	GTYRAC	1 cut(s)	679
HinfI	GANTC	7 cut(s)	184, 398, 602, 887, 919, 1004, 1167
HphI	GGTGA	3 cut(s)	742, 857, 928
Hpy166II	GTNNAC	3 cut(s)	39, 679, 1520
Hpy188I	TCNGA	7 cut(s)	208, 549, 592, 618, 631, 646, 1149
Hpy188III	TCNNGA	8 cut(s)	129, 334, 790, 891, 923, 1001, 1127, 1373
Hpy8I	GTNNAC	3 cut(s)	39, 679, 1520
Hpy99I	CGWCG	2 cut(s)	46, 373
HpyAV	CCTTC	3 cut(s)	75, 727, 965
HpyCH4III	ACNGT	4 cut(s)	676, 698, 1037, 1153
HpyCH4IV	ACGT	4 cut(s)	41, 1303, 1311, 1522
HpyCH4V	TGCA	6 cut(s)	222, 768, 1177, 1281, 1296, 1424
HpyF10VI	GCNNNNNNNGC	4 cut(s)	67, 272, 1129, 1513
HpyF3I	CTNAG	6 cut(s)	234, 477, 928, 990, 1433, 1468
HpySE526I	ACGT	4 cut(s)	41, 1303, 1311, 1522
Hsp92II	CATG	5 cut(s)	256, 926, 947, 1376, 1466
HspAI	GCGC	1 cut(s)	1514
Kpn2I	TCCGGA	1 cut(s)	128
KspI	CCGCGG	1 cut(s)	95
Kzo9I	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
LmnI	GCTCC	4 cut(s)	248, 431, 1099, 1266
Lsp1109I	GCAGC	5 cut(s)	40, 225, 1334, 1410, 1421
LweI	GCATC	7 cut(s)	70, 102, 573, 1042, 1132, 1283, 1433
MaeI	CTAG	4 cut(s)	461, 750, 1008, 1164
MaeII	ACGT	4 cut(s)	41, 1303, 1311, 1522
MaeIII	GTNAC	5 cut(s)	469, 610, 698, 1031, 1153
MalI	GATC	6 cut(s)	551, 655, 1197, 1332, 1438, 1485
MboI	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
MfeI	CAATTG	1 cut(s)	703
MflI	RGATCY	3 cut(s)	653, 1330, 1483
MlsI	TGGCCA	1 cut(s)	819
MluCI	AATT	3 cut(s)	301, 623, 703
MluNI	TGGCCA	1 cut(s)	819
MlyI	GAGTC	2 cut(s)	178, 392
MmeI	TCCRAC	1 cut(s)	1027
Mox20I	TGGCCA	1 cut(s)	819
Mph1103I	ATGCAT	1 cut(s)	1426
MroI	TCCGGA	1 cut(s)	128
MscI	TGGCCA	1 cut(s)	819
MseI	TTAA	2 cut(s)	117, 1526
MslI	CAYNNNNRTG	1 cut(s)	1371
Msp20I	TGGCCA	1 cut(s)	819
MspA1I	CMGCKG	2 cut(s)	94, 238
MspR9I	CCNGG	8 cut(s)	174, 307, 405, 423, 578, 1289, 1448, 1449
MunI	CAATTG	1 cut(s)	703
MvaI	CCWGG	2 cut(s)	578, 1289
MvnI	CGCG	3 cut(s)	70, 94, 1516
MwoI	GCNNNNNNNGC	4 cut(s)	67, 272, 1129, 1513
NciI	CCSGG	6 cut(s)	174, 307, 405, 423, 1448, 1449
NdeI	CATATG	1 cut(s)	1354
NdeII	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
NlaIII	CATG	5 cut(s)	256, 926, 947, 1376, 1466
NlaIV	GGNNCC	4 cut(s)	177, 250, 433, 1485
NmuCI	GTSAC	4 cut(s)	469, 610, 1031, 1153
NsiI	ATGCAT	1 cut(s)	1426
NspI	RCATGY	1 cut(s)	1466
PaeI	GCATGC	1 cut(s)	1466
PagI	TCATGA	2 cut(s)	922, 1372
PaqCI	CACCTGC	1 cut(s)	718
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PfeI	GAWTC	5 cut(s)	602, 887, 919, 1004, 1167
PinAI	ACCGGT	1 cut(s)	1215
PkrI	GCNGC	9 cut(s)	30, 33, 90, 93, 240, 288, 1324, 1400, 1411
PleI	GAGTC	2 cut(s)	178, 392
PpsI	GAGTC	2 cut(s)	178, 392
Ppu21I	YACGTR	2 cut(s)	1304, 1312
PshAI	GACNNNNGTC	1 cut(s)	367
PsiI	TTATAA	1 cut(s)	1275
Psp6I	CCWGG	2 cut(s)	576, 1287
PspGI	CCWGG	2 cut(s)	576, 1287
PspN4I	GGNNCC	4 cut(s)	177, 250, 433, 1485
PspPI	GGNCC	3 cut(s)	176, 341, 362
PstNI	CAGNNNCTG	1 cut(s)	241
PsuI	RGATCY	3 cut(s)	653, 1330, 1483
PvuII	CAGCTG	1 cut(s)	238
RsaI	GTAC	3 cut(s)	565, 1302, 1380
RsaNI	GTAC	3 cut(s)	564, 1301, 1379
RseI	CAYNNNNRTG	1 cut(s)	1371
SacII	CCGCGG	1 cut(s)	95
SalI	GTCGAC	1 cut(s)	677
SaqAI	TTAA	2 cut(s)	117, 1526
SatI	GCNGC	9 cut(s)	29, 32, 89, 92, 239, 287, 1323, 1399, 1410
Sau3AI	GATC	6 cut(s)	549, 653, 1195, 1330, 1436, 1483
Sau96I	GGNCC	3 cut(s)	176, 341, 362
SchI	GAGTC	2 cut(s)	178, 392
ScrFI	CCNGG	8 cut(s)	174, 307, 405, 423, 578, 1289, 1448, 1449
SfaNI	GCATC	7 cut(s)	70, 102, 573, 1042, 1132, 1283, 1433
SfcI	CTRYAG	1 cut(s)	1509
Sfr303I	CCGCGG	1 cut(s)	95
SgrBI	CCGCGG	1 cut(s)	95
SinI	GGWCC	2 cut(s)	341, 362
SmaI	CCCGGG	1 cut(s)	1449
SmiMI	CAYNNNNRTG	1 cut(s)	1371
SmlI	CTYRAG	1 cut(s)	465
SmoI	CTYRAG	1 cut(s)	465
SnaBI	TACGTA	1 cut(s)	1304
SphI	GCATGC	1 cut(s)	1466
Sse9I	AATT	3 cut(s)	301, 623, 703
SspMI	CTAG	4 cut(s)	461, 750, 1008, 1164
StyD4I	CCNGG	8 cut(s)	172, 305, 403, 421, 576, 1287, 1446, 1447
StyI	CCWWGG	1 cut(s)	1262
TaaI	ACNGT	4 cut(s)	676, 698, 1037, 1153
TaiI	ACGT	4 cut(s)	44, 1306, 1314, 1525
TaqI	TCGA	6 cut(s)	194, 356, 396, 678, 965, 1489
TasI	AATT	3 cut(s)	301, 623, 703
TatI	WGTACW	1 cut(s)	563
TauI	GCSGC	4 cut(s)	34, 91, 94, 289
TfiI	GAWTC	5 cut(s)	602, 887, 919, 1004, 1167
Tru1I	TTAA	2 cut(s)	117, 1526
Tru9I	TTAA	2 cut(s)	117, 1526
TscAI	CASTG	3 cut(s)	325, 1042, 1192
TseFI	GTSAC	4 cut(s)	469, 610, 1031, 1153
TseI	GCWGC	5 cut(s)	28, 238, 1322, 1398, 1409
Tsp45I	GTSAC	4 cut(s)	469, 610, 1031, 1153
TspDTI	ATGAA	6 cut(s)	497, 534, 657, 932, 1095, 1101
TspMI	CCCGGG	1 cut(s)	1447
TspRI	CASTG	3 cut(s)	325, 1042, 1192
VpaK11BI	GGWCC	2 cut(s)	341, 362
XapI	RAATTY	1 cut(s)	301
XceI	RCATGY	1 cut(s)	1466
XcmI	CCANNNNNNNNNTGG	2 cut(s)	944, 1019
XmaI	CCCGGG	1 cut(s)	1447
XmiI	GTMKAC	2 cut(s)	678, 1519
XspI	CTAG	4 cut(s)	461, 750, 1008, 1164
Zsp2I	ATGCAT	1 cut(s)	1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.