Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0007326

Physical Location & Seq

Genomic Coordinates Forward (+)

53262126 .. 53265043

Gene Structure 2918 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG377200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGGCTGGAAACGAAGAAGAACACCGGCAGCCGCCGCCGCCGTCGCCTCGTCCTCCGCATCCTTCGCGTCCCACGATTACTCTGCCGCCGCGGACTTGTTTTGAGACGATGTTTAACAACAACAACAACAACAACAACTCCGGAACCGGCGGGAATACTGGGGCGGGCTTGGGGTTCAGTCCGGGGCCGATGACTCTGGTTTCGAGCTTCTTCTCTGATGGGGAAGACTGCAAGTCGTTTTCTCAGCTGCTGGCTGGAGCCATGCTGTCTCCGGCGGACAGGGCGGGGTTTCCGCCGCTTGAAGACAGGAATTCCGGTGATGACAGCAGTGATTTCCGGTTTAAGAATGGACCGGCGGGGATGTCGATTGGACCGCCGTCGCCGATGTTTCCGGCTGGTTTCCTCGACTCGCCGGGAGGACTATTCTCACCCGGACAGGGAGCCTTTGGAATGACGCACCAGCAGGCACTAGCTCAAGTGACAGCTCAGGCTTCACAATCCCAATCCTACACTTTTCATATCCCAAATGAACACTCTACGTCTATGACACAGCTTCCGATCTTTACTTCCAGTACAACACCACCCCAGGAGATGCCATCTGAAATACCCGATTCTGGGGTCACTCTGAAAGAATCGTCTGATATCTCACATTCGGAACAGAGATCCCAACCATCTTCATTGACTGTCGACAAGCCTAATGATGACGGTTACAATTGGCGGAAATATGGGCAGAAGCAGGTGAAGGGGAGTGAGTTTCCTAGAAGTTATTACAAATGCACGCATCCCAGTTGTCCAGTCAAGAAAAAGGTTGAACGCTCGGTTGATGGCCAGATAACTGAAATCATTTACAAGGGTGAGCATAACCATCAGCGTCCTCAATCTAAGCGCCCAAAGGATTCTGGAAATCAAAATGGAAATGTTCAGGTGAATCATGACTTAGCTTCCCAAGTTCATGGTGAGAACTTGAACAAATCAAAAGAAGGGACTTATTCAATGTCTAAGCAGGGTCAGGAATCTAGCCAAGCAATATCTGGGACAAGTGACAGTGAGGAAGTTGGAGATGCTGAAACAAAAGTAGAAGAAAAAGATGAAGATGAACCTGCTGCCAAGAGACGAAATATGGAGGTCAGGCATTCAGAGCCAGCTTCTTCTCATCGGACTGTGACAGAGCCTAGAATCATAGTGCAGACAACCAGTGAAGTTGATCTGTTAGATGATGGCTACCGGTGGCGAAAGTATGGGCAGAAAGTTGTCAAAGGCAATCCTTATCCAAGGAGCTATTATAAATGCACATTCCAGGGATGCAATGTACGTAAGCACGTAGAGAGAGCAGCAACAGATCCTAAAGCCGTCATAACAACATATGAGGGCAAACATAATCATGATGTACCTGCTTCTAAATCTGGCAGCCACTACGCAGCCAACAACAATGCATCAAATCTAAGATCAGGCAACCCGGGAACTGAAAAGCATGCCTCAGTTAGCAAGATGGATCCTCGAAACAATGACCAACAGCCTGTAGCGCGTCTACGTTTAAAAGAAGAACAAATAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043901 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1900150 GO:1900424 GO:1900425 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

518

Amino Acids

56.77

Weight (kDa)

6.66

Isoelectric Point (pI)

59.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	234 - 290	1e-27	WRKY DNA -binding domain
WRKY	PF03106	405 - 462	9.5e-27	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13960 AT1G13960 AT2G03340
fragaria_vesca	FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 FvH4_4g30640
malus_domestica	MD13G1067600.v1.1 MD16G1066500.v1.1
prunus_persica	Prupe.1G280700_v2.0.a1 Prupe.1G280700_v2.0.a1
pyrus_communis	pycom13g05940 pycom16g05790
rosa_chinensis	RchiOBHm_Chr4g0439041
rosa_laevigata	RLG00000006307
rosa_multiflora	Rmu_sc0001338.1_g000004 Rmu_sc0003226.1_g000090
rosa_roxburghii	Rroxscaffold_5G00380040
rosa_rugosa	Rorug04G0315200
rosa_samantha	Rh4AG365900 Rh4BG377200 Rh4CG391300 Rh4DG371900
rosa_wichuraiana	Rw0G007420 Rw0G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1284
AarI	CACCTGC	1 cut(s)	727
Acc36I	ACCTGC	3 cut(s)	727, 1108, 1399
AccI	GTMKAC	2 cut(s)	687, 1528
AccII	CGCG	3 cut(s)	67, 91, 1525
AccIII	TCCGGA	1 cut(s)	140
AclWI	GGATC	4 cut(s)	657, 1334, 1487, 1500
AcoI	YGGCCR	1 cut(s)	826
AcsI	RAATTY	1 cut(s)	310
AfaI	GTAC	3 cut(s)	574, 1311, 1389
AfiI	CCNNNNNNNGG	3 cut(s)	437, 614, 615
AgeI	ACCGGT	1 cut(s)	1224
AgsI	TTSAA	4 cut(s)	302, 812, 967, 993
AhdI	GACNNNNNGTC	1 cut(s)	232
AjnI	CCWGG	2 cut(s)	585, 1296
AluBI	AGCT	8 cut(s)	207, 247, 473, 485, 553, 941, 1145, 1278
AluI	AGCT	8 cut(s)	207, 247, 473, 485, 553, 941, 1145, 1278
Alw26I	GTCTC	3 cut(s)	98, 273, 1105
AlwI	GGATC	4 cut(s)	657, 1334, 1487, 1500
AlwNI	CAGNNNCTG	1 cut(s)	250
Ama87I	CYCGRG	1 cut(s)	1456
Aor13HI	TCCGGA	1 cut(s)	140
AoxI	GGCC	2 cut(s)	185, 826
ApeKI	GCWGC	6 cut(s)	28, 247, 1103, 1331, 1407, 1418
ApoI	RAATTY	1 cut(s)	310
ArsI	GACNNNNNNTTYG	2 cut(s)	184, 216
AsiGI	ACCGGT	1 cut(s)	1224
AspLEI	GCGC	2 cut(s)	888, 1525
AspS9I	GGNCC	3 cut(s)	185, 350, 371
AsuC2I	CCSGG	5 cut(s)	183, 414, 432, 1457, 1458
AsuHPI	GGTGA	6 cut(s)	329, 420, 751, 866, 937, 968
AvaI	CYCGRG	1 cut(s)	1456
AvaII	GGWCC	2 cut(s)	350, 371
BalI	TGGCCA	1 cut(s)	828
BamHI	GGATCC	1 cut(s)	1492
BbsI	GAAGAC	2 cut(s)	231, 309
BbvI	GCAGC	6 cut(s)	40, 234, 1090, 1343, 1419, 1430
BccI	CCATC	7 cut(s)	212, 604, 679, 818, 873, 1211, 1483
BceAI	ACGGC	3 cut(s)	25, 361, 1334
BcgI	CGANNNNNNTGC	2 cut(s)	64, 98
BciT130I	CCWGG	2 cut(s)	587, 1298
BcnI	CCSGG	5 cut(s)	183, 414, 432, 1457, 1458
BcoDI	GTCTC	3 cut(s)	98, 273, 1105
BfaI	CTAG	4 cut(s)	470, 759, 1017, 1173
BfmI	CTRYAG	1 cut(s)	1518
BfoI	RGCGCY	1 cut(s)	889
BfuAI	ACCTGC	3 cut(s)	727, 1108, 1399
Bme1390I	CCNGG	7 cut(s)	183, 414, 432, 587, 1298, 1457, 1458
Bme18I	GGWCC	2 cut(s)	350, 371
BmeRI	GACNNNNNGTC	1 cut(s)	232
BmeT110I	CYCGRG	1 cut(s)	1456
BmgT120I	GGNCC	3 cut(s)	185, 350, 371
BmiI	GGNNCC	5 cut(s)	145, 186, 259, 442, 1494
BmrFI	CCNGG	7 cut(s)	183, 414, 432, 587, 1298, 1457, 1458
BmrI	ACTGGG	2 cut(s)	168, 780
BmsI	GCATC	6 cut(s)	67, 582, 790, 1051, 1292, 1442
BmuI	ACTGGG	2 cut(s)	168, 780
BoxI	GACNNNNGTC	1 cut(s)	376
BpiI	GAAGAC	2 cut(s)	231, 309
BpmI	CTGGAG	1 cut(s)	276
Bpu10I	CCTNAGC	1 cut(s)	486
BpuEI	CTTGAG	1 cut(s)	459
BpuMI	CCSGG	5 cut(s)	183, 414, 432, 1457, 1458
BsaAI	YACGTR	2 cut(s)	1313, 1321
BsaJI	CCNNGG	6 cut(s)	89, 182, 585, 1271, 1297, 1456
BsaWI	WCCGGW	4 cut(s)	140, 314, 336, 1224
BsaXI	ACNNNNNCTCC	2 cut(s)	122, 152
Bsc4I	CCNNNNNNNGG	3 cut(s)	437, 614, 615
Bse118I	RCCGGY	4 cut(s)	24, 146, 352, 1224
Bse1I	ACTGG	5 cut(s)	163, 570, 786, 794, 1194
Bse3DI	GCAATG	1 cut(s)	1312
BseAI	TCCGGA	1 cut(s)	140
BseBI	CCWGG	2 cut(s)	587, 1298
BseDI	CCNNGG	6 cut(s)	89, 182, 585, 1271, 1297, 1456
BseGI	GGATG	4 cut(s)	58, 366, 781, 1307
BseLI	CCNNNNNNNGG	3 cut(s)	437, 614, 615
BseMI	GCAATG	1 cut(s)	1312
BseMII	CTCAG	3 cut(s)	257, 500, 1491
BseNI	ACTGG	5 cut(s)	163, 570, 786, 794, 1194
BseXI	GCAGC	6 cut(s)	40, 234, 1090, 1343, 1419, 1430
BsgI	GTGCAG	1 cut(s)	1205
Bsh1236I	CGCG	3 cut(s)	67, 91, 1525
BshFI	GGCC	2 cut(s)	187, 828
BshTI	ACCGGT	1 cut(s)	1224
BsiHKCI	CYCGRG	1 cut(s)	1456
BslFI	GGGAC	3 cut(s)	54, 997, 1048
BslI	CCNNNNNNNGG	3 cut(s)	437, 614, 615
BsmAI	GTCTC	3 cut(s)	98, 273, 1105
BsmBI	CGTCTC	2 cut(s)	98, 1105
BsmFI	GGGAC	3 cut(s)	54, 997, 1048
BsmI	GAATGC	1 cut(s)	1132
BsnI	GGCC	2 cut(s)	187, 828
BsoBI	CYCGRG	1 cut(s)	1456
Bsp13I	TCCGGA	1 cut(s)	140
Bsp143I	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
BspANI	GGCC	2 cut(s)	187, 828
BspCNI	CTCAG	3 cut(s)	256, 499, 1490
BspEI	TCCGGA	1 cut(s)	140
BspFNI	CGCG	3 cut(s)	67, 91, 1525
BspHI	TCATGA	2 cut(s)	931, 1381
BspLI	GGNNCC	5 cut(s)	145, 186, 259, 442, 1494
BspMI	ACCTGC	3 cut(s)	727, 1108, 1399
BspPI	GGATC	4 cut(s)	657, 1334, 1487, 1500
BsrDI	GCAATG	1 cut(s)	1312
BsrFI	RCCGGY	4 cut(s)	24, 146, 352, 1224
BsrI	ACTGG	5 cut(s)	163, 570, 786, 794, 1194
BssAI	RCCGGY	4 cut(s)	24, 146, 352, 1224
BssECI	CCNNGG	6 cut(s)	89, 182, 585, 1271, 1297, 1456
BssMI	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
BssT1I	CCWWGG	1 cut(s)	1271
Bst2UI	CCWGG	2 cut(s)	587, 1298
Bst4CI	ACNGT	4 cut(s)	685, 707, 1046, 1162
BstBAI	YACGTR	2 cut(s)	1313, 1321
BstC8I	GCNNGC	6 cut(s)	166, 252, 465, 779, 1143, 1473
BstDEI	CTNAG	7 cut(s)	243, 486, 882, 937, 999, 1442, 1477
BstDSI	CCRYGG	1 cut(s)	89
BstF5I	GGATG	4 cut(s)	58, 366, 781, 1307
BstFNI	CGCG	3 cut(s)	67, 91, 1525
BstH2I	RGCGCY	1 cut(s)	889
BstHHI	GCGC	2 cut(s)	888, 1525
BstKTI	GATC	6 cut(s)	561, 665, 1207, 1342, 1448, 1495
BstMAI	GTCTC	3 cut(s)	98, 273, 1105
BstMBI	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
BstMWI	GCNNNNNNNGC	7 cut(s)	34, 37, 43, 64, 281, 1138, 1522
BstNI	CCWGG	2 cut(s)	587, 1298
BstNSI	RCATGY	1 cut(s)	1475
BstPAI	GACNNNNGTC	1 cut(s)	376
BstSCI	CCNGG	7 cut(s)	181, 412, 430, 585, 1296, 1455, 1456
BstSFI	CTRYAG	1 cut(s)	1518
BstSNI	TACGTA	1 cut(s)	1313
BstUI	CGCG	3 cut(s)	67, 91, 1525
BstV1I	GCAGC	6 cut(s)	40, 234, 1090, 1343, 1419, 1430
BstV2I	GAAGAC	2 cut(s)	231, 309
BstX2I	RGATCY	3 cut(s)	662, 1339, 1492
BstXI	CCANNNNNNTGG	1 cut(s)	953
BstYI	RGATCY	3 cut(s)	662, 1339, 1492
BsuRI	GGCC	2 cut(s)	187, 828
BtgI	CCRYGG	1 cut(s)	89
BtsCI	GGATG	4 cut(s)	58, 366, 781, 1307
BtsI	GCAGTG	1 cut(s)	334
BtsIMutI	CAGTG	3 cut(s)	334, 1051, 1201
BveI	ACCTGC	3 cut(s)	727, 1108, 1399
Cac8I	GCNNGC	6 cut(s)	166, 252, 465, 779, 1143, 1473
CaiI	CAGNNNCTG	1 cut(s)	250
CciI	TCATGA	2 cut(s)	931, 1381
CfoI	GCGC	2 cut(s)	888, 1525
Cfr10I	RCCGGY	4 cut(s)	24, 146, 352, 1224
Cfr13I	GGNCC	3 cut(s)	185, 350, 371
Cfr42I	CCGCGG	1 cut(s)	92
Cfr9I	CCCGGG	1 cut(s)	1456
CseI	GACGC	4 cut(s)	56, 463, 860, 1514
Csp6I	GTAC	3 cut(s)	573, 1310, 1388
CspAI	ACCGGT	1 cut(s)	1224
CviAII	CATG	5 cut(s)	262, 932, 953, 1382, 1472
CviQI	GTAC	3 cut(s)	573, 1310, 1388
DdeI	CTNAG	7 cut(s)	243, 486, 882, 937, 999, 1442, 1477
DpnI	GATC	6 cut(s)	560, 664, 1206, 1341, 1447, 1494
DpnII	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
DraI	TTTAAA	1 cut(s)	1536
DriI	GACNNNNNGTC	1 cut(s)	232
EaeI	YGGCCR	1 cut(s)	826
Eam1105I	GACNNNNNGTC	1 cut(s)	232
EciI	GGCGGA	3 cut(s)	282, 290, 733
Eco105I	TACGTA	1 cut(s)	1313
Eco130I	CCWWGG	1 cut(s)	1271
Eco32I	GATATC	1 cut(s)	643
Eco47I	GGWCC	2 cut(s)	350, 371
Eco88I	CYCGRG	1 cut(s)	1456
EcoRI	GAATTC	1 cut(s)	310
EcoRII	CCWGG	2 cut(s)	585, 1296
EcoRV	GATATC	1 cut(s)	643
EcoT14I	CCWWGG	1 cut(s)	1271
EcoT22I	ATGCAT	1 cut(s)	1435
ErhI	CCWWGG	1 cut(s)	1271
Esp3I	CGTCTC	2 cut(s)	98, 1105
FaeI	CATG	5 cut(s)	265, 935, 956, 1385, 1475
FaqI	GGGAC	3 cut(s)	54, 997, 1048
FatI	CATG	5 cut(s)	261, 931, 952, 1381, 1471
FauI	CCCGC	4 cut(s)	143, 157, 277, 349
FauNDI	CATATG	1 cut(s)	1363
FblI	GTMKAC	2 cut(s)	687, 1528
FokI	GGATG	4 cut(s)	45, 373, 768, 1314
FspBI	CTAG	4 cut(s)	470, 759, 1017, 1173
GlaI	GCGC	2 cut(s)	887, 1524
GsuI	CTGGAG	1 cut(s)	276
HaeII	RGCGCY	1 cut(s)	889
HaeIII	GGCC	2 cut(s)	187, 828
HgaI	GACGC	4 cut(s)	56, 463, 860, 1514
HhaI	GCGC	2 cut(s)	888, 1525
Hin1II	CATG	5 cut(s)	265, 935, 956, 1385, 1475
Hin6I	GCGC	2 cut(s)	886, 1523
HinP1I	GCGC	2 cut(s)	886, 1523
HincII	GTYRAC	1 cut(s)	688
HindII	GTYRAC	1 cut(s)	688
HinfI	GANTC	8 cut(s)	193, 407, 611, 632, 896, 928, 1013, 1176
HphI	GGTGA	6 cut(s)	329, 420, 751, 866, 937, 968
Hpy166II	GTNNAC	2 cut(s)	688, 1529
Hpy188I	TCNGA	8 cut(s)	217, 558, 601, 627, 640, 655, 1138, 1158
Hpy188III	TCNNGA	6 cut(s)	141, 799, 900, 932, 1010, 1382
Hpy8I	GTNNAC	2 cut(s)	688, 1529
Hpy99I	CGWCG	2 cut(s)	46, 382
HpyAV	CCTTC	3 cut(s)	72, 736, 974
HpyCH4III	ACNGT	4 cut(s)	685, 707, 1046, 1162
HpyCH4IV	ACGT	4 cut(s)	539, 1312, 1320, 1531
HpyCH4V	TGCA	6 cut(s)	231, 777, 1186, 1290, 1305, 1433
HpyF10VI	GCNNNNNNNGC	7 cut(s)	34, 37, 43, 64, 281, 1138, 1522
HpyF3I	CTNAG	7 cut(s)	243, 486, 882, 937, 999, 1442, 1477
HpySE526I	ACGT	4 cut(s)	539, 1312, 1320, 1531
Hsp92II	CATG	5 cut(s)	265, 935, 956, 1385, 1475
HspAI	GCGC	2 cut(s)	886, 1523
Kpn2I	TCCGGA	1 cut(s)	140
KspI	CCGCGG	1 cut(s)	92
Kzo9I	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
LmnI	GCTCC	3 cut(s)	257, 440, 1275
Lsp1109I	GCAGC	6 cut(s)	40, 234, 1090, 1343, 1419, 1430
LweI	GCATC	6 cut(s)	67, 582, 790, 1051, 1292, 1442
MaeI	CTAG	4 cut(s)	470, 759, 1017, 1173
MaeII	ACGT	4 cut(s)	539, 1312, 1320, 1531
MaeIII	GTNAC	5 cut(s)	478, 619, 707, 1040, 1162
MalI	GATC	6 cut(s)	560, 664, 1206, 1341, 1447, 1494
MboI	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
MfeI	CAATTG	1 cut(s)	712
MflI	RGATCY	3 cut(s)	662, 1339, 1492
MlsI	TGGCCA	1 cut(s)	828
MluCI	AATT	2 cut(s)	310, 712
MluNI	TGGCCA	1 cut(s)	828
MlyI	GAGTC	2 cut(s)	187, 401
MmeI	TCCRAC	1 cut(s)	1036
Mox20I	TGGCCA	1 cut(s)	828
Mph1103I	ATGCAT	1 cut(s)	1435
MroI	TCCGGA	1 cut(s)	140
MscI	TGGCCA	1 cut(s)	828
MseI	TTAA	3 cut(s)	114, 342, 1535
MslI	CAYNNNNRTG	1 cut(s)	1380
Msp20I	TGGCCA	1 cut(s)	828
MspA1I	CMGCKG	2 cut(s)	91, 247
MspR9I	CCNGG	7 cut(s)	183, 414, 432, 587, 1298, 1457, 1458
MunI	CAATTG	1 cut(s)	712
Mva1269I	GAATGC	1 cut(s)	1132
MvaI	CCWGG	2 cut(s)	587, 1298
MvnI	CGCG	3 cut(s)	67, 91, 1525
MwoI	GCNNNNNNNGC	7 cut(s)	34, 37, 43, 64, 281, 1138, 1522
NciI	CCSGG	5 cut(s)	183, 414, 432, 1457, 1458
NdeI	CATATG	1 cut(s)	1363
NdeII	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
NlaIII	CATG	5 cut(s)	265, 935, 956, 1385, 1475
NlaIV	GGNNCC	5 cut(s)	145, 186, 259, 442, 1494
NmuCI	GTSAC	4 cut(s)	478, 619, 1040, 1162
NsiI	ATGCAT	1 cut(s)	1435
NspI	RCATGY	1 cut(s)	1475
PaeI	GCATGC	1 cut(s)	1475
PagI	TCATGA	2 cut(s)	931, 1381
PaqCI	CACCTGC	1 cut(s)	727
PcsI	WCGNNNNNNNCGW	1 cut(s)	71
PctI	GAATGC	1 cut(s)	1132
PfeI	GAWTC	6 cut(s)	611, 632, 896, 928, 1013, 1176
PinAI	ACCGGT	1 cut(s)	1224
PleI	GAGTC	2 cut(s)	187, 401
PpsI	GAGTC	2 cut(s)	187, 401
Ppu21I	YACGTR	2 cut(s)	1313, 1321
PshAI	GACNNNNGTC	1 cut(s)	376
PsiI	TTATAA	1 cut(s)	1284
Psp6I	CCWGG	2 cut(s)	585, 1296
PspGI	CCWGG	2 cut(s)	585, 1296
PspN4I	GGNNCC	5 cut(s)	145, 186, 259, 442, 1494
PspPI	GGNCC	3 cut(s)	185, 350, 371
PstNI	CAGNNNCTG	1 cut(s)	250
PsuI	RGATCY	3 cut(s)	662, 1339, 1492
PvuII	CAGCTG	1 cut(s)	247
RsaI	GTAC	3 cut(s)	574, 1311, 1389
RsaNI	GTAC	3 cut(s)	573, 1310, 1388
RseI	CAYNNNNRTG	1 cut(s)	1380
SacII	CCGCGG	1 cut(s)	92
SalI	GTCGAC	1 cut(s)	686
SaqAI	TTAA	3 cut(s)	114, 342, 1535
Sau3AI	GATC	6 cut(s)	558, 662, 1204, 1339, 1445, 1492
Sau96I	GGNCC	3 cut(s)	185, 350, 371
SchI	GAGTC	2 cut(s)	187, 401
ScrFI	CCNGG	7 cut(s)	183, 414, 432, 587, 1298, 1457, 1458
SfaNI	GCATC	6 cut(s)	67, 582, 790, 1051, 1292, 1442
SfcI	CTRYAG	1 cut(s)	1518
Sfr303I	CCGCGG	1 cut(s)	92
SgrBI	CCGCGG	1 cut(s)	92
SinI	GGWCC	2 cut(s)	350, 371
SmaI	CCCGGG	1 cut(s)	1458
SmiMI	CAYNNNNRTG	1 cut(s)	1380
SmlI	CTYRAG	1 cut(s)	474
SmoI	CTYRAG	1 cut(s)	474
SnaBI	TACGTA	1 cut(s)	1313
SphI	GCATGC	1 cut(s)	1475
Sse9I	AATT	2 cut(s)	310, 712
SspMI	CTAG	4 cut(s)	470, 759, 1017, 1173
StyD4I	CCNGG	7 cut(s)	181, 412, 430, 585, 1296, 1455, 1456
StyI	CCWWGG	1 cut(s)	1271
TaaI	ACNGT	4 cut(s)	685, 707, 1046, 1162
TaiI	ACGT	4 cut(s)	542, 1315, 1323, 1534
TaqI	TCGA	5 cut(s)	203, 365, 405, 687, 1498
TasI	AATT	2 cut(s)	310, 712
TatI	WGTACW	1 cut(s)	572
TauI	GCSGC	6 cut(s)	34, 37, 40, 88, 91, 298
TfiI	GAWTC	6 cut(s)	611, 632, 896, 928, 1013, 1176
Tru1I	TTAA	3 cut(s)	114, 342, 1535
Tru9I	TTAA	3 cut(s)	114, 342, 1535
TscAI	CASTG	3 cut(s)	334, 1051, 1201
TseFI	GTSAC	4 cut(s)	478, 619, 1040, 1162
TseI	GCWGC	6 cut(s)	28, 247, 1103, 1331, 1407, 1418
Tsp45I	GTSAC	4 cut(s)	478, 619, 1040, 1162
TspDTI	ATGAA	6 cut(s)	506, 543, 666, 941, 1104, 1110
TspMI	CCCGGG	1 cut(s)	1456
TspRI	CASTG	3 cut(s)	334, 1051, 1201
VpaK11BI	GGWCC	2 cut(s)	350, 371
XapI	RAATTY	1 cut(s)	310
XceI	RCATGY	1 cut(s)	1475
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1028
XmaI	CCCGGG	1 cut(s)	1456
XmiI	GTMKAC	2 cut(s)	687, 1528
XspI	CTAG	4 cut(s)	470, 759, 1017, 1173
Zsp2I	ATGCAT	1 cut(s)	1435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.