Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00270

Orthogroup ID

OG0007326

Physical Location & Seq

Genomic Coordinates Forward (+)

222521 .. 225033

Gene Structure 2513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G007420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGGCTGGAAACGAAGAAGAACACCGGCAGCCGCCGTCCACGTCGTCATCTCGTCCTCCGCATCCCACGATTACTCTGCCGCCGCGGACTAGTTTTGAGACCATGTTTAACAACAACTCCGGAACAGGCGGGAATACTGGGGCGGGCTTGGGGTTCAGTCCGGGGCCGATGACTCTGGTTTCGAGCTTCTTCTCTGATGGGGAAGACTGCAAGTCGTTTTCTCAGCTGCTGGCTGGAGCCATGCTGTCTCCGGCGGACAGGGCGGCGTTTCCGCCGCTTGAAGACAGGAATTCCGGGGATGACAGCAGTGATTTCCGGTTCAAGAATGGACCGGCGGGTATGTCGATTGGACCGCTGTCGCCGATGTTTCCGGCTGGTTTCCTCGACTCGCCGGGAGGACTATTCTCGCCCGGACAGGGAGCCTTTGGAATGACGCACCAGCAGGCACTAGCTCAAGTGACAGCTCAGGCTTCACAATCCCAATCCTACACTTTTCATATCCCAAATGAACACTCTACGTCTATGACACAGCTTCCGATCTTTACTTCCAGTACAACACCACCCCAGGAGATGCCATCTGAAATACCCGATTCTGGGGTCACTCTGAAAGAATCGTCTGATATCTCACATTCGGAACAGAGATCCCAACCATCTTCATTGACTGTCGACAAGCCTAATGATGACGGTTACAATTGGCGGAAATATGGGCAGAAGCAGGTGAAGGGGAGTGAGTTTCCTAGAAGTTATTACAAATGCACGCATCCCAGTTGTCCAGTCAAGAAAAAGGTTGAACGCTCGGTTGATGGCCAGATAACTGAAATCATTTACAAGGGTGAGCATAACCATCAGCGTCCTCAATCTAAGCGCCCAAAGGATTCTGGAAATCAAAATGGAAATGTTCAGGTGAATCATGACTTAGCTTCCCAAGTTCATGGGGGGAACTTGAACAAATCGAAAGAAAGAACTTATTCAATGTCTAAGCAGGGTCAGGAATCTAGCCAAGCAATATCTGGGACAAGTGACAGTGAGGAAGTTAGAGATGCTGAAAGTGAGGAAGTTGGGGATGCTGAAACAGAATGCCTAGATGATGGCTACATGTGGCGAAAGTATGGGAGCTATTATAAATGCACATTCCAGGGATGCAATGTACGTAAGCACGTAGAGAGAGCAGCAACAGATCCTAAAGCCGTCATAACAACATATGAGGGGAAACATAATCATGATGTACCTGCTTCTATATCTGGCAGCCACCATGCAGCCAACAACAATGCATCAAATCTAAGATCAGGCAATCCGGGAACTGAAAAGCATGCCTCAGTTAGCAAGATGGATCCTCAAAACAATGACCAACAGCCTGTAGCGCGTCTACGTTTAAAAGAAGAACAAATAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0002831 GO:0002832 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0009753 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0014070 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043901 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0097159 GO:0140110 GO:1900150 GO:1900424 GO:1900425 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

464

Amino Acids

50.48

Weight (kDa)

6.02

Isoelectric Point (pI)

58.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	227 - 283	8.7e-28	WRKY DNA -binding domain
WRKY	PF03106	362 - 408	1.6e-12	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007326)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13960 AT1G13960 AT2G03340
fragaria_vesca	FvH4_4g30640 FvH4_4g30640 FvH4_4g30640 FvH4_4g30640
malus_domestica	MD13G1067600.v1.1 MD16G1066500.v1.1
prunus_persica	Prupe.1G280700_v2.0.a1 Prupe.1G280700_v2.0.a1
pyrus_communis	pycom13g05940 pycom16g05790
rosa_chinensis	RchiOBHm_Chr4g0439041
rosa_laevigata	RLG00000006307
rosa_multiflora	Rmu_sc0001338.1_g000004 Rmu_sc0003226.1_g000090
rosa_roxburghii	Rroxscaffold_5G00380040
rosa_rugosa	Rorug04G0315200
rosa_samantha	Rh4AG365900 Rh4BG377200 Rh4CG391300 Rh4DG371900
rosa_wichuraiana	Rw0G007420 Rw0G016970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1122
AarI	CACCTGC	1 cut(s)	706
Acc36I	ACCTGC	2 cut(s)	706, 1237
AccI	GTMKAC	2 cut(s)	666, 1366
AccII	CGCG	2 cut(s)	85, 1363
AccIII	TCCGGA	1 cut(s)	119
AclWI	GGATC	4 cut(s)	636, 1172, 1325, 1338
AcoI	YGGCCR	1 cut(s)	805
AcsI	RAATTY	1 cut(s)	289
AfaI	GTAC	3 cut(s)	553, 1149, 1227
AfiI	CCNNNNNNNGG	3 cut(s)	416, 593, 594
AflIII	ACRYGT	1 cut(s)	1095
AgsI	TTSAA	5 cut(s)	281, 322, 791, 946, 972
AhdI	GACNNNNNGTC	1 cut(s)	211
AhlI	ACTAGT	1 cut(s)	89
AjiI	CACGTC	1 cut(s)	42
AjnI	CCWGG	2 cut(s)	564, 1134
AluBI	AGCT	7 cut(s)	186, 226, 452, 464, 532, 920, 1116
AluI	AGCT	7 cut(s)	186, 226, 452, 464, 532, 920, 1116
Alw26I	GTCTC	2 cut(s)	92, 252
AlwI	GGATC	4 cut(s)	636, 1172, 1325, 1338
AlwNI	CAGNNNCTG	1 cut(s)	229
Aor13HI	TCCGGA	1 cut(s)	119
AoxI	GGCC	2 cut(s)	164, 805
ApeKI	GCWGC	5 cut(s)	28, 226, 1169, 1245, 1256
ApoI	RAATTY	1 cut(s)	289
ArsI	GACNNNNNNTTYG	2 cut(s)	163, 195
Asp700I	GAANNNNTTC	1 cut(s)	967
AspLEI	GCGC	2 cut(s)	867, 1363
AspS9I	GGNCC	3 cut(s)	164, 329, 350
AsuC2I	CCSGG	5 cut(s)	162, 295, 393, 411, 1296
AsuHPI	GGTGA	3 cut(s)	730, 845, 916
AvaII	GGWCC	2 cut(s)	329, 350
BalI	TGGCCA	1 cut(s)	807
BamHI	GGATCC	1 cut(s)	1330
BbsI	GAAGAC	2 cut(s)	210, 288
BbvI	GCAGC	5 cut(s)	40, 213, 1181, 1257, 1268
BccI	CCATC	7 cut(s)	191, 583, 658, 797, 852, 1082, 1321
BceAI	ACGGC	2 cut(s)	19, 1172
BcgI	CGANNNNNNTGC	2 cut(s)	58, 92
BciT130I	CCWGG	2 cut(s)	566, 1136
BcnI	CCSGG	5 cut(s)	162, 295, 393, 411, 1296
BcoDI	GTCTC	2 cut(s)	92, 252
BcuI	ACTAGT	1 cut(s)	89
BfaI	CTAG	5 cut(s)	90, 449, 738, 996, 1082
BfmI	CTRYAG	1 cut(s)	1356
BfoI	RGCGCY	1 cut(s)	868
BfuAI	ACCTGC	2 cut(s)	706, 1237
Bme1390I	CCNGG	7 cut(s)	162, 295, 393, 411, 566, 1136, 1296
Bme18I	GGWCC	2 cut(s)	329, 350
BmeRI	GACNNNNNGTC	1 cut(s)	211
BmgBI	CACGTC	1 cut(s)	42
BmgT120I	GGNCC	3 cut(s)	164, 329, 350
BmiI	GGNNCC	4 cut(s)	165, 238, 421, 1332
BmrFI	CCNGG	7 cut(s)	162, 295, 393, 411, 566, 1136, 1296
BmrI	ACTGGG	2 cut(s)	147, 759
BmsI	GCATC	7 cut(s)	70, 561, 769, 1030, 1054, 1130, 1280
BmuI	ACTGGG	2 cut(s)	147, 759
BoxI	GACNNNNGTC	1 cut(s)	355
BpiI	GAAGAC	2 cut(s)	210, 288
BpmI	CTGGAG	1 cut(s)	255
Bpu10I	CCTNAGC	1 cut(s)	465
BpuEI	CTTGAG	1 cut(s)	438
BpuMI	CCSGG	5 cut(s)	162, 295, 393, 411, 1296
BsaAI	YACGTR	2 cut(s)	1151, 1159
BsaI	GGTCTC	1 cut(s)	92
BsaJI	CCNNGG	5 cut(s)	83, 161, 294, 564, 1135
BsaWI	WCCGGW	2 cut(s)	119, 315
BsaXI	ACNNNNNCTCC	2 cut(s)	101, 131
Bsc4I	CCNNNNNNNGG	3 cut(s)	416, 593, 594
Bse118I	RCCGGY	2 cut(s)	24, 331
Bse1I	ACTGG	4 cut(s)	142, 549, 765, 773
Bse3DI	GCAATG	1 cut(s)	1150
BseAI	TCCGGA	1 cut(s)	119
BseBI	CCWGG	2 cut(s)	566, 1136
BseDI	CCNNGG	5 cut(s)	83, 161, 294, 564, 1135
BseGI	GGATG	5 cut(s)	61, 304, 760, 1069, 1145
BseLI	CCNNNNNNNGG	3 cut(s)	416, 593, 594
BseMI	GCAATG	1 cut(s)	1150
BseMII	CTCAG	3 cut(s)	236, 479, 1329
BseNI	ACTGG	4 cut(s)	142, 549, 765, 773
BseXI	GCAGC	5 cut(s)	40, 213, 1181, 1257, 1268
Bsh1236I	CGCG	2 cut(s)	85, 1363
BshFI	GGCC	2 cut(s)	166, 807
BslFI	GGGAC	1 cut(s)	1027
BslI	CCNNNNNNNGG	3 cut(s)	416, 593, 594
BsmAI	GTCTC	2 cut(s)	92, 252
BsmFI	GGGAC	1 cut(s)	1027
BsmI	GAATGC	1 cut(s)	1082
BsnI	GGCC	2 cut(s)	166, 807
Bso31I	GGTCTC	1 cut(s)	92
Bsp13I	TCCGGA	1 cut(s)	119
Bsp143I	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
BspANI	GGCC	2 cut(s)	166, 807
BspCNI	CTCAG	3 cut(s)	235, 478, 1328
BspEI	TCCGGA	1 cut(s)	119
BspFNI	CGCG	2 cut(s)	85, 1363
BspHI	TCATGA	2 cut(s)	910, 1219
BspLI	GGNNCC	4 cut(s)	165, 238, 421, 1332
BspMI	ACCTGC	2 cut(s)	706, 1237
BspPI	GGATC	4 cut(s)	636, 1172, 1325, 1338
BspTNI	GGTCTC	1 cut(s)	92
BsrDI	GCAATG	1 cut(s)	1150
BsrFI	RCCGGY	2 cut(s)	24, 331
BsrI	ACTGG	4 cut(s)	142, 549, 765, 773
BssAI	RCCGGY	2 cut(s)	24, 331
BssECI	CCNNGG	5 cut(s)	83, 161, 294, 564, 1135
BssMI	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
Bst2UI	CCWGG	2 cut(s)	566, 1136
Bst4CI	ACNGT	3 cut(s)	664, 686, 1025
BstBAI	YACGTR	2 cut(s)	1151, 1159
BstC8I	GCNNGC	5 cut(s)	145, 231, 444, 758, 1311
BstDEI	CTNAG	7 cut(s)	222, 465, 861, 916, 978, 1280, 1315
BstDSI	CCRYGG	1 cut(s)	83
BstF5I	GGATG	5 cut(s)	61, 304, 760, 1069, 1145
BstFNI	CGCG	2 cut(s)	85, 1363
BstH2I	RGCGCY	1 cut(s)	868
BstHHI	GCGC	2 cut(s)	867, 1363
BstKTI	GATC	5 cut(s)	540, 644, 1180, 1286, 1333
BstMAI	GTCTC	2 cut(s)	92, 252
BstMBI	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
BstMWI	GCNNNNNNNGC	2 cut(s)	260, 1360
BstNI	CCWGG	2 cut(s)	566, 1136
BstNSI	RCATGY	2 cut(s)	1099, 1313
BstPAI	GACNNNNGTC	1 cut(s)	355
BstSCI	CCNGG	7 cut(s)	160, 293, 391, 409, 564, 1134, 1294
BstSFI	CTRYAG	1 cut(s)	1356
BstSNI	TACGTA	1 cut(s)	1151
BstUI	CGCG	2 cut(s)	85, 1363
BstV1I	GCAGC	5 cut(s)	40, 213, 1181, 1257, 1268
BstV2I	GAAGAC	2 cut(s)	210, 288
BstX2I	RGATCY	3 cut(s)	641, 1177, 1330
BstXI	CCANNNNNNTGG	1 cut(s)	932
BstYI	RGATCY	3 cut(s)	641, 1177, 1330
BsuRI	GGCC	2 cut(s)	166, 807
BtgI	CCRYGG	1 cut(s)	83
BtrI	CACGTC	1 cut(s)	42
BtsCI	GGATG	5 cut(s)	61, 304, 760, 1069, 1145
BtsI	GCAGTG	1 cut(s)	313
BtsIMutI	CAGTG	2 cut(s)	313, 1030
BveI	ACCTGC	2 cut(s)	706, 1237
Cac8I	GCNNGC	5 cut(s)	145, 231, 444, 758, 1311
CaiI	CAGNNNCTG	1 cut(s)	229
CciI	TCATGA	2 cut(s)	910, 1219
CfoI	GCGC	2 cut(s)	867, 1363
Cfr10I	RCCGGY	2 cut(s)	24, 331
Cfr13I	GGNCC	3 cut(s)	164, 329, 350
Cfr42I	CCGCGG	1 cut(s)	86
CseI	GACGC	3 cut(s)	442, 839, 1352
Csp6I	GTAC	3 cut(s)	552, 1148, 1226
CviAII	CATG	8 cut(s)	103, 241, 911, 932, 1096, 1220, 1253, 1310
CviQI	GTAC	3 cut(s)	552, 1148, 1226
DdeI	CTNAG	7 cut(s)	222, 465, 861, 916, 978, 1280, 1315
DpnI	GATC	5 cut(s)	539, 643, 1179, 1285, 1332
DpnII	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
DraI	TTTAAA	1 cut(s)	1374
DriI	GACNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	1 cut(s)	805
Eam1105I	GACNNNNNGTC	1 cut(s)	211
EciI	GGCGGA	3 cut(s)	261, 269, 712
Eco105I	TACGTA	1 cut(s)	1151
Eco31I	GGTCTC	1 cut(s)	92
Eco32I	GATATC	1 cut(s)	622
Eco47I	GGWCC	2 cut(s)	329, 350
EcoRI	GAATTC	1 cut(s)	289
EcoRII	CCWGG	2 cut(s)	564, 1134
EcoRV	GATATC	1 cut(s)	622
EcoT22I	ATGCAT	1 cut(s)	1273
FaeI	CATG	8 cut(s)	106, 244, 914, 935, 1099, 1223, 1256, 1313
FaqI	GGGAC	1 cut(s)	1027
FatI	CATG	8 cut(s)	102, 240, 910, 931, 1095, 1219, 1252, 1309
FauI	CCCGC	3 cut(s)	122, 136, 328
FauNDI	CATATG	1 cut(s)	1201
FblI	GTMKAC	2 cut(s)	666, 1366
FokI	GGATG	5 cut(s)	48, 311, 747, 1076, 1152
FspBI	CTAG	5 cut(s)	90, 449, 738, 996, 1082
GlaI	GCGC	2 cut(s)	866, 1362
GsuI	CTGGAG	1 cut(s)	255
HaeII	RGCGCY	1 cut(s)	868
HaeIII	GGCC	2 cut(s)	166, 807
HgaI	GACGC	3 cut(s)	442, 839, 1352
HhaI	GCGC	2 cut(s)	867, 1363
Hin1II	CATG	8 cut(s)	106, 244, 914, 935, 1099, 1223, 1256, 1313
Hin6I	GCGC	2 cut(s)	865, 1361
HinP1I	GCGC	2 cut(s)	865, 1361
HincII	GTYRAC	1 cut(s)	667
HindII	GTYRAC	1 cut(s)	667
HinfI	GANTC	7 cut(s)	172, 386, 590, 611, 875, 907, 992
HphI	GGTGA	3 cut(s)	730, 845, 916
Hpy166II	GTNNAC	3 cut(s)	39, 667, 1367
Hpy188I	TCNGA	6 cut(s)	196, 537, 580, 606, 619, 634
Hpy188III	TCNNGA	7 cut(s)	120, 322, 778, 879, 911, 989, 1220
Hpy8I	GTNNAC	3 cut(s)	39, 667, 1367
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	1 cut(s)	715
HpyCH4III	ACNGT	3 cut(s)	664, 686, 1025
HpyCH4IV	ACGT	5 cut(s)	41, 518, 1150, 1158, 1369
HpyCH4V	TGCA	6 cut(s)	210, 756, 1128, 1143, 1256, 1271
HpyF10VI	GCNNNNNNNGC	2 cut(s)	260, 1360
HpyF3I	CTNAG	7 cut(s)	222, 465, 861, 916, 978, 1280, 1315
HpySE526I	ACGT	5 cut(s)	41, 518, 1150, 1158, 1369
Hsp92II	CATG	8 cut(s)	106, 244, 914, 935, 1099, 1223, 1256, 1313
HspAI	GCGC	2 cut(s)	865, 1361
Kpn2I	TCCGGA	1 cut(s)	119
KspI	CCGCGG	1 cut(s)	86
Kzo9I	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
LmnI	GCTCC	3 cut(s)	236, 419, 1113
Lsp1109I	GCAGC	5 cut(s)	40, 213, 1181, 1257, 1268
LweI	GCATC	7 cut(s)	70, 561, 769, 1030, 1054, 1130, 1280
MaeI	CTAG	5 cut(s)	90, 449, 738, 996, 1082
MaeII	ACGT	5 cut(s)	41, 518, 1150, 1158, 1369
MaeIII	GTNAC	4 cut(s)	457, 598, 686, 1019
MalI	GATC	5 cut(s)	539, 643, 1179, 1285, 1332
MboI	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
MboII	GAAGA	7 cut(s)	26, 29, 181, 215, 293, 645, 1391
MfeI	CAATTG	1 cut(s)	691
MflI	RGATCY	3 cut(s)	641, 1177, 1330
MlsI	TGGCCA	1 cut(s)	807
MluCI	AATT	2 cut(s)	289, 691
MluNI	TGGCCA	1 cut(s)	807
MlyI	GAGTC	2 cut(s)	166, 380
MnlI	CCTC	9 cut(s)	66, 389, 392, 864, 1021, 1045, 1198, 1324, 1344
Mox20I	TGGCCA	1 cut(s)	807
Mph1103I	ATGCAT	1 cut(s)	1273
MroI	TCCGGA	1 cut(s)	119
MroXI	GAANNNNTTC	1 cut(s)	967
MscI	TGGCCA	1 cut(s)	807
MseI	TTAA	2 cut(s)	108, 1373
MslI	CAYNNNNRTG	1 cut(s)	1218
Msp20I	TGGCCA	1 cut(s)	807
MspA1I	CMGCKG	3 cut(s)	85, 226, 355
MspR9I	CCNGG	7 cut(s)	162, 295, 393, 411, 566, 1136, 1296
MunI	CAATTG	1 cut(s)	691
Mva1269I	GAATGC	1 cut(s)	1082
MvaI	CCWGG	2 cut(s)	566, 1136
MvnI	CGCG	2 cut(s)	85, 1363
MwoI	GCNNNNNNNGC	2 cut(s)	260, 1360
NciI	CCSGG	5 cut(s)	162, 295, 393, 411, 1296
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
NlaIII	CATG	8 cut(s)	106, 244, 914, 935, 1099, 1223, 1256, 1313
NlaIV	GGNNCC	4 cut(s)	165, 238, 421, 1332
NmuCI	GTSAC	3 cut(s)	457, 598, 1019
NsiI	ATGCAT	1 cut(s)	1273
NspI	RCATGY	2 cut(s)	1099, 1313
PaeI	GCATGC	1 cut(s)	1313
PagI	TCATGA	2 cut(s)	910, 1219
PaqCI	CACCTGC	1 cut(s)	706
PciI	ACATGT	1 cut(s)	1095
PctI	GAATGC	1 cut(s)	1082
PdmI	GAANNNNTTC	1 cut(s)	967
PfeI	GAWTC	5 cut(s)	590, 611, 875, 907, 992
PfoI	TCCNGGA	1 cut(s)	1294
PleI	GAGTC	2 cut(s)	166, 380
PpsI	GAGTC	2 cut(s)	166, 380
Ppu21I	YACGTR	2 cut(s)	1151, 1159
PscI	ACATGT	1 cut(s)	1095
PshAI	GACNNNNGTC	1 cut(s)	355
PsiI	TTATAA	1 cut(s)	1122
Psp6I	CCWGG	2 cut(s)	564, 1134
PspGI	CCWGG	2 cut(s)	564, 1134
PspN4I	GGNNCC	4 cut(s)	165, 238, 421, 1332
PspPI	GGNCC	3 cut(s)	164, 329, 350
PstNI	CAGNNNCTG	1 cut(s)	229
PsuI	RGATCY	3 cut(s)	641, 1177, 1330
PvuII	CAGCTG	1 cut(s)	226
RsaI	GTAC	3 cut(s)	553, 1149, 1227
RsaNI	GTAC	3 cut(s)	552, 1148, 1226
RseI	CAYNNNNRTG	1 cut(s)	1218
SacII	CCGCGG	1 cut(s)	86
SalI	GTCGAC	1 cut(s)	665
SaqAI	TTAA	2 cut(s)	108, 1373
Sau3AI	GATC	5 cut(s)	537, 641, 1177, 1283, 1330
Sau96I	GGNCC	3 cut(s)	164, 329, 350
SchI	GAGTC	2 cut(s)	166, 380
ScrFI	CCNGG	7 cut(s)	162, 295, 393, 411, 566, 1136, 1296
SfaNI	GCATC	7 cut(s)	70, 561, 769, 1030, 1054, 1130, 1280
SfcI	CTRYAG	1 cut(s)	1356
Sfr303I	CCGCGG	1 cut(s)	86
SgrBI	CCGCGG	1 cut(s)	86
SinI	GGWCC	2 cut(s)	329, 350
SmiMI	CAYNNNNRTG	1 cut(s)	1218
SmlI	CTYRAG	1 cut(s)	453
SmoI	CTYRAG	1 cut(s)	453
SnaBI	TACGTA	1 cut(s)	1151
SpeI	ACTAGT	1 cut(s)	89
SphI	GCATGC	1 cut(s)	1313
Sse9I	AATT	2 cut(s)	289, 691
SspMI	CTAG	5 cut(s)	90, 449, 738, 996, 1082
StyD4I	CCNGG	7 cut(s)	160, 293, 391, 409, 564, 1134, 1294
TaaI	ACNGT	3 cut(s)	664, 686, 1025
TaiI	ACGT	5 cut(s)	44, 521, 1153, 1161, 1372
TaqI	TCGA	5 cut(s)	182, 344, 384, 666, 953
TasI	AATT	2 cut(s)	289, 691
TatI	WGTACW	1 cut(s)	551
TauI	GCSGC	5 cut(s)	34, 82, 85, 266, 277
TfiI	GAWTC	5 cut(s)	590, 611, 875, 907, 992
Tru1I	TTAA	2 cut(s)	108, 1373
Tru9I	TTAA	2 cut(s)	108, 1373
TscAI	CASTG	2 cut(s)	313, 1030
TseFI	GTSAC	3 cut(s)	457, 598, 1019
TseI	GCWGC	5 cut(s)	28, 226, 1169, 1245, 1256
Tsp45I	GTSAC	3 cut(s)	457, 598, 1019
TspDTI	ATGAA	4 cut(s)	485, 522, 645, 920
TspRI	CASTG	2 cut(s)	313, 1030
VpaK11BI	GGWCC	2 cut(s)	329, 350
XapI	RAATTY	1 cut(s)	289
XceI	RCATGY	2 cut(s)	1099, 1313
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1007
XmiI	GTMKAC	2 cut(s)	666, 1366
XmnI	GAANNNNTTC	1 cut(s)	967
XspI	CTAG	5 cut(s)	90, 449, 738, 996, 1082
Zsp2I	ATGCAT	1 cut(s)	1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.