Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006313

Physical Location & Seq

Genomic Coordinates Forward (+)

31845982 .. 31850036

Gene Structure 4055 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g33730.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGCACAAGCTTTTCAGAACATATCCCATCTTCCTCACAAACCCCACATTTCTAATACCCATTTCACAATTTCACATCTCCAGCCGAACCCTAGCTCCCAATCCCAAGCTCCAATTCGTAGTCAATCAAGTTCAAGAGCTCCGATCAACAAACCCTACTAATGAATTCGTCTCGGCCTCATCAGACTCCGACGAACCGTCCGGCCTATATTGTGCGGTCCAGATTTCGCACCCATGGCGGGAGTGGGTGGACCTGATGGAGCTTTTGCTGAAGAGAGGCTATTTCGAAGGGGACGAAAACCCGTTTCGAAACGGCCAAATGGGTCCCAAGGAATCGAACCGGGTCCGAACCGCTTGCCTTAACTTTGCCAGGGACCGGTCGAGTCTGCTGAGGTTACTGTCGAGGAAAGATGTCCAGATTATTGCAGGGTATGGATGCCCAAGCACAGATAGGAAAGTTGTCAACTCAGGAAAGCGGCTAAGGGCGCATGTCGGCATTGATGAAGGAGATGTGTGCAGCTCCTGCAATTTGAGAGGCGACTGTGAGAGAGCATATGTGAAGGCCCGTGAAGATGAGGGCGGGCGTACTGTGGATGTTATGCGGTTCTTGTTAACACACGGGATTGATCCCCTTACTGATACAGTTGGGAACAAGCCATCTCTAAATAAAAAGGTCAAAGAATCAGTGAGAAGGCTGTTGAAAGAGATGGTGGAGTGTAGCACTGAAGAGCTTGAAAATCAAACCGACCTCCCAAAGAGCATGACTCTAAAAAGTGTTGAAAAGTCACCAAAAGATGCAGTACTACAAGAAAAATACGGCGTAAACGTTCCAATGAAGCAAGGTGACTGGATCTGCCCCAAATGCAACTTCCTAAATTTTGCCAGAAATGTTAAGTGCTTACGTTGTGATGGTCTATTCCAAGAGAGACTGGCAAAACTGAGGGAGGATCAGGATCAGGATCAGGATCATCTCCCATTGAAGAAAGGGGACTGGATATGTGAAAAATGCAATTTCCTAAATTTTGCCAAGAATAGTAGATGCTTGCAGTGCAAAGAGAAGCCACCCAAGCGAGAGCTAAATCCTGGAGAGTGGGAATGTGAATCCTGCAATTACATCAATTTTAGGAAAAACATGCTATGCTTAAAATGCGATCATAAAAGGCCCAAGACATGTGTTGAACCTATGCATGAAGATGGAGGCTACCGTAAGAGTAATAGAGTGAGTTTCGGTGACACAGATGTTAATGATCGATACTACTCAGGCCAAGGTAGAAATGGTCACAACCGAGATGCAGGCAGGTGGAGATTTGTGGTTGAAGAGAATGATGATTTTAGTCACCCAAACTCATCAGATAAGACTTCTAGATTTGTAGACTTTCCGATTGCAGGAGGTAAGACCGAACTGTCTCAGAATCCACAAAAGAGGGACAAATGGAAGTTGAAGATGTTAGAGAAGAACAAAGGAGGCGCAACGGATATGGCAAGTGACGATGAACTTAGGTCTTCCAGAACTGAAAGAAGAGTGTTGCTTTCTGATTCTACAGATGATGAAGAGATGGCCGAGTGGTTTGGGTATAGAAAGCTGGAAACACAAAGGCTTCCATCTAGGCCTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UQ_con zf-RanBP

Protein Analysis

539

Amino Acids

61.94

Weight (kDa)

8.62

Isoelectric Point (pI)

43.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	279 - 304	2.1e-08	Zn-finger in Ran binding protein and others
Zn_ribbon_RanBP	PF00641	327 - 351	3.4e-06	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70650 AT1G70650
fragaria_vesca	FvH4_4g33730
malus_domestica	MD13G1029300.v1.1
prunus_persica	Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1
pyrus_communis	pycom13g01790 pycom16g01760
rosa_chinensis	RchiOBHm_Chr4g0443241
rosa_laevigata	RLG00000005943 RLG00000005947
rosa_multiflora	Rmu_co8168196.1_g000001 Rmu_sc0007238.1_g000005 Rmu_sc0007968.1_g000002 Rmu_sc0018919.1_g000002
rosa_roxburghii	Rroxscaffold_5G00383810
rosa_rugosa	Rorug04G0344700 Rorug04G0345000
rosa_samantha	Rh4AG399700 Rh4BG411400 Rh4BG411500 Rh4CG426800 Rh4DG406600
rosa_wichuraiana	Rw4G034460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1287
AasI	GACNNNNNNGTC	1 cut(s)	1402
Acc36I	ACCTGC	1 cut(s)	1287
AccI	GTMKAC	1 cut(s)	1371
AciI	CCGC	6 cut(s)	215, 238, 351, 475, 579, 601
AclI	AACGTT	1 cut(s)	825
AclWI	GGATC	6 cut(s)	620, 857, 954, 960, 966, 972
AcoI	YGGCCR	2 cut(s)	313, 1557
AcsI	RAATTY	3 cut(s)	164, 874, 1018
AcuI	CTGAAG	2 cut(s)	290, 744
AfaI	GTAC	2 cut(s)	586, 801
AfiI	CCNNNNNNNGG	3 cut(s)	238, 375, 1385
AflIII	ACRYGT	1 cut(s)	1169
AgeI	ACCGGT	1 cut(s)	375
AgsI	TTSAA	8 cut(s)	134, 700, 734, 779, 979, 1178, 1316, 1441
AhdI	GACNNNNNGTC	1 cut(s)	196
AjnI	CCWGG	2 cut(s)	368, 1081
AjuI	GAANNNNNNNTTGG	4 cut(s)	98, 130, 851, 883
AloI	GAACNNNNNNTCC	2 cut(s)	79, 111
AluBI	AGCT	9 cut(s)	10, 95, 109, 139, 262, 519, 730, 1075, 1582
AluI	AGCT	9 cut(s)	10, 95, 109, 139, 262, 519, 730, 1075, 1582
Alw21I	GWGCWC	1 cut(s)	141
Alw26I	GTCTC	3 cut(s)	175, 919, 1410
AlwI	GGATC	6 cut(s)	620, 857, 954, 960, 966, 972
AlwNI	CAGNNNCTG	1 cut(s)	522
AoxI	GGCC	8 cut(s)	174, 202, 313, 561, 1160, 1261, 1557, 1607
ApeKI	GCWGC	1 cut(s)	516
ApoI	RAATTY	3 cut(s)	164, 874, 1018
AsiGI	ACCGGT	1 cut(s)	375
AspLEI	GCGC	2 cut(s)	487, 1469
AspS9I	GGNCC	7 cut(s)	217, 250, 323, 343, 373, 562, 1161
AsuC2I	CCSGG	1 cut(s)	341
AsuHPI	GGTGA	4 cut(s)	777, 854, 1241, 1328
AsuII	TTCGAA	2 cut(s)	285, 307
AvaII	GGWCC	5 cut(s)	217, 250, 323, 343, 373
BanII	GRGCYC	1 cut(s)	141
BbsI	GAAGAC	1 cut(s)	1494
Bbv12I	GWGCWC	1 cut(s)	141
BbvCI	CCTCAGC	1 cut(s)	389
BbvI	GCAGC	1 cut(s)	528
BccI	CCATC	8 cut(s)	35, 250, 664, 700, 902, 1187, 1549, 1609
BceAI	ACGGC	2 cut(s)	328, 832
BcgI	CGANNNNNNTGC	2 cut(s)	336, 370
BciT130I	CCWGG	2 cut(s)	370, 1083
BcnI	CCSGG	1 cut(s)	341
BcoDI	GTCTC	3 cut(s)	175, 919, 1410
BfaI	CTAG	3 cut(s)	92, 1362, 1605
BfmI	CTRYAG	1 cut(s)	1539
BfuAI	ACCTGC	1 cut(s)	1287
BisI	GCNGC	2 cut(s)	476, 517
BlsI	GCNGC	2 cut(s)	477, 518
BmcAI	AGTACT	1 cut(s)	801
Bme1390I	CCNGG	3 cut(s)	341, 370, 1083
Bme18I	GGWCC	5 cut(s)	217, 250, 323, 343, 373
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmgT120I	GGNCC	7 cut(s)	217, 250, 323, 343, 373, 562, 1161
BmiI	GGNNCC	4 cut(s)	324, 325, 344, 374
BmrFI	CCNGG	3 cut(s)	341, 370, 1083
BmsI	GCATC	4 cut(s)	425, 784, 1028, 1279
BpiI	GAAGAC	1 cut(s)	1494
BplI	GAGNNNNNCTC	2 cut(s)	748, 780
BpmI	CTGGAG	2 cut(s)	64, 1104
Bpu10I	CCTNAGC	2 cut(s)	389, 479
Bpu14I	TTCGAA	2 cut(s)	285, 307
BpuMI	CCSGG	1 cut(s)	341
Bsa29I	ATCGAT	1 cut(s)	1249
BsaBI	GATNNNNATC	3 cut(s)	951, 957, 963
BsaJI	CCNNGG	4 cut(s)	233, 327, 369, 1264
BsaWI	WCCGGW	1 cut(s)	375
BsaXI	ACNNNNNCTCC	2 cut(s)	79, 109
Bsc4I	CCNNNNNNNGG	3 cut(s)	238, 375, 1385
Bse118I	RCCGGY	1 cut(s)	375
Bse1I	ACTGG	3 cut(s)	851, 933, 995
Bse8I	GATNNNNATC	3 cut(s)	951, 957, 963
BseBI	CCWGG	2 cut(s)	370, 1083
BseCI	ATCGAT	1 cut(s)	1249
BseDI	CCNNGG	4 cut(s)	233, 327, 369, 1264
BseGI	GGATG	2 cut(s)	440, 598
BseJI	GATNNNNATC	3 cut(s)	951, 957, 963
BseLI	CCNNNNNNNGG	3 cut(s)	238, 375, 1385
BseMII	CTCAG	5 cut(s)	380, 480, 929, 1272, 1421
BseNI	ACTGG	3 cut(s)	851, 933, 995
BseXI	GCAGC	1 cut(s)	528
BsgI	GTGCAG	1 cut(s)	535
Bsh1285I	CGRYCG	1 cut(s)	380
BshFI	GGCC	8 cut(s)	176, 204, 315, 563, 1162, 1263, 1559, 1609
BshTI	ACCGGT	1 cut(s)	375
BshVI	ATCGAT	1 cut(s)	1249
BsiEI	CGRYCG	1 cut(s)	380
BsiHKAI	GWGCWC	1 cut(s)	141
BsiSI	CCGG	3 cut(s)	201, 340, 376
BslFI	GGGAC	5 cut(s)	305, 309, 386, 1001, 1439
BslI	CCNNNNNNNGG	3 cut(s)	238, 375, 1385
BsmAI	GTCTC	3 cut(s)	175, 919, 1410
BsmBI	CGTCTC	1 cut(s)	175
BsmFI	GGGAC	5 cut(s)	305, 309, 386, 1001, 1439
BsnI	GGCC	8 cut(s)	176, 204, 315, 563, 1162, 1263, 1559, 1609
Bsp119I	TTCGAA	2 cut(s)	285, 307
Bsp1286I	GDGCHC	1 cut(s)	141
Bsp143I	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
Bsp19I	CCATGG	1 cut(s)	233
BspACI	CCGC	6 cut(s)	215, 238, 351, 475, 579, 601
BspANI	GGCC	8 cut(s)	176, 204, 315, 563, 1162, 1263, 1559, 1609
BspCNI	CTCAG	5 cut(s)	381, 479, 930, 1271, 1420
BspDI	ATCGAT	1 cut(s)	1249
BspLI	GGNNCC	4 cut(s)	324, 325, 344, 374
BspMI	ACCTGC	1 cut(s)	1287
BspPI	GGATC	6 cut(s)	620, 857, 954, 960, 966, 972
BspQI	GCTCTTC	1 cut(s)	720
BspT104I	TTCGAA	2 cut(s)	285, 307
BsrFI	RCCGGY	1 cut(s)	375
BsrI	ACTGG	3 cut(s)	851, 933, 995
BssAI	RCCGGY	1 cut(s)	375
BssECI	CCNNGG	4 cut(s)	233, 327, 369, 1264
BssMI	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
BssT1I	CCWWGG	3 cut(s)	233, 327, 1264
Bst2UI	CCWGG	2 cut(s)	370, 1083
Bst4CI	ACNGT	7 cut(s)	198, 399, 542, 589, 643, 1205, 1404
Bst6I	CTCTTC	5 cut(s)	266, 720, 1311, 1513, 1545
BstAPI	GCANNNNNTGC	1 cut(s)	522
BstBI	TTCGAA	2 cut(s)	285, 307
BstC8I	GCNNGC	4 cut(s)	355, 581, 1043, 1294
BstDEI	CTNAG	7 cut(s)	389, 466, 479, 938, 1258, 1407, 1496
BstDSI	CCRYGG	1 cut(s)	233
BstF5I	GGATG	2 cut(s)	440, 598
BstHHI	GCGC	2 cut(s)	487, 1469
BstKTI	GATC	9 cut(s)	146, 628, 852, 949, 955, 961, 967, 1153, 1249
BstMAI	GTCTC	3 cut(s)	175, 919, 1410
BstMBI	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
BstMCI	CGRYCG	1 cut(s)	380
BstMWI	GCNNNNNNNGC	7 cut(s)	235, 484, 522, 861, 1047, 1066, 1146
BstNI	CCWGG	2 cut(s)	370, 1083
BstNSI	RCATGY	3 cut(s)	491, 1135, 1173
BstSCI	CCNGG	3 cut(s)	339, 368, 1081
BstSFI	CTRYAG	1 cut(s)	1539
BstV1I	GCAGC	1 cut(s)	528
BstV2I	GAAGAC	1 cut(s)	1494
BstX2I	RGATCY	1 cut(s)	849
BstYI	RGATCY	1 cut(s)	849
Bsu15I	ATCGAT	1 cut(s)	1249
BsuRI	GGCC	8 cut(s)	176, 204, 315, 563, 1162, 1263, 1559, 1609
BsuTUI	ATCGAT	1 cut(s)	1249
BtgI	CCRYGG	1 cut(s)	233
BtsCI	GGATG	2 cut(s)	440, 598
BtsI	GCAGTG	1 cut(s)	1052
BtsIMutI	CAGTG	3 cut(s)	690, 720, 1052
BveI	ACCTGC	1 cut(s)	1287
Cac8I	GCNNGC	4 cut(s)	355, 581, 1043, 1294
CaiI	CAGNNNCTG	1 cut(s)	522
CfoI	GCGC	2 cut(s)	487, 1469
Cfr10I	RCCGGY	1 cut(s)	375
Cfr13I	GGNCC	7 cut(s)	217, 250, 323, 343, 373, 562, 1161
ClaI	ATCGAT	1 cut(s)	1249
Csp6I	GTAC	2 cut(s)	585, 800
CspAI	ACCGGT	1 cut(s)	375
CviAII	CATG	6 cut(s)	234, 488, 760, 1132, 1170, 1187
CviQI	GTAC	2 cut(s)	585, 800
DdeI	CTNAG	7 cut(s)	389, 466, 479, 938, 1258, 1407, 1496
DpnI	GATC	9 cut(s)	145, 627, 851, 948, 954, 960, 966, 1152, 1248
DpnII	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
DrdI	GACNNNNNNGTC	1 cut(s)	1402
DriI	GACNNNNNGTC	1 cut(s)	196
DseDI	GACNNNNNNGTC	1 cut(s)	1402
EaeI	YGGCCR	2 cut(s)	313, 1557
Eam1104I	CTCTTC	5 cut(s)	266, 720, 1311, 1513, 1545
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	5 cut(s)	266, 720, 1311, 1513, 1545
Ecl136II	GAGCTC	1 cut(s)	139
Eco130I	CCWWGG	3 cut(s)	233, 327, 1264
Eco147I	AGGCCT	1 cut(s)	1609
Eco24I	GRGCYC	1 cut(s)	141
Eco47I	GGWCC	5 cut(s)	217, 250, 323, 343, 373
Eco53kI	GAGCTC	1 cut(s)	139
Eco57I	CTGAAG	2 cut(s)	290, 744
EcoICRI	GAGCTC	1 cut(s)	139
EcoO109I	RGGNCCY	1 cut(s)	323
EcoRI	GAATTC	1 cut(s)	164
EcoRII	CCWGG	2 cut(s)	368, 1081
EcoT14I	CCWWGG	3 cut(s)	233, 327, 1264
EcoT22I	ATGCAT	1 cut(s)	1188
EcoT38I	GRGCYC	1 cut(s)	141
ErhI	CCWWGG	3 cut(s)	233, 327, 1264
Esp3I	CGTCTC	1 cut(s)	175
FaeI	CATG	6 cut(s)	237, 491, 763, 1135, 1173, 1190
FaqI	GGGAC	5 cut(s)	305, 309, 386, 1001, 1439
FatI	CATG	6 cut(s)	233, 487, 759, 1131, 1169, 1186
FauI	CCCGC	2 cut(s)	231, 572
FauNDI	CATATG	1 cut(s)	553
FblI	GTMKAC	1 cut(s)	1371
Fnu4HI	GCNGC	2 cut(s)	476, 517
FokI	GGATG	2 cut(s)	447, 605
FriOI	GRGCYC	1 cut(s)	141
Fsp4HI	GCNGC	2 cut(s)	476, 517
FspBI	CTAG	3 cut(s)	92, 1362, 1605
GlaI	GCGC	2 cut(s)	486, 1468
GluI	GCNGC	2 cut(s)	476, 517
GsuI	CTGGAG	2 cut(s)	64, 1104
HaeIII	GGCC	8 cut(s)	176, 204, 315, 563, 1162, 1263, 1559, 1609
HapII	CCGG	3 cut(s)	201, 340, 376
HhaI	GCGC	2 cut(s)	487, 1469
Hin1II	CATG	6 cut(s)	237, 491, 763, 1135, 1173, 1190
Hin6I	GCGC	2 cut(s)	485, 1467
HinP1I	GCGC	2 cut(s)	485, 1467
HincII	GTYRAC	2 cut(s)	463, 612
HindII	GTYRAC	2 cut(s)	463, 612
HindIII	AAGCTT	1 cut(s)	8
HinfI	GANTC	8 cut(s)	185, 332, 382, 680, 763, 1100, 1411, 1535
HpaI	GTTAAC	1 cut(s)	612
HpaII	CCGG	3 cut(s)	201, 340, 376
HphI	GGTGA	4 cut(s)	777, 854, 1241, 1328
Hpy166II	GTNNAC	5 cut(s)	250, 463, 612, 823, 1372
Hpy188I	TCNGA	9 cut(s)	17, 143, 184, 190, 347, 1351, 1380, 1410, 1534
Hpy188III	TCNNGA	9 cut(s)	134, 220, 415, 468, 950, 956, 962, 1362, 1506
Hpy8I	GTNNAC	5 cut(s)	250, 463, 612, 823, 1372
Hpy99I	CGWCG	1 cut(s)	194
HpyAV	CCTTC	4 cut(s)	281, 497, 553, 684
HpyCH4III	ACNGT	7 cut(s)	198, 399, 542, 589, 643, 1205, 1404
HpyCH4IV	ACGT	2 cut(s)	825, 901
HpyF10VI	GCNNNNNNNGC	7 cut(s)	235, 484, 522, 861, 1047, 1066, 1146
HpyF3I	CTNAG	7 cut(s)	389, 466, 479, 938, 1258, 1407, 1496
HpySE526I	ACGT	2 cut(s)	825, 901
Hsp92II	CATG	6 cut(s)	237, 491, 763, 1135, 1173, 1190
HspAI	GCGC	2 cut(s)	485, 1467
KflI	GGGWCCC	1 cut(s)	323
KspAI	GTTAAC	1 cut(s)	612
Kzo9I	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
LguI	GCTCTTC	1 cut(s)	720
LmnI	GCTCC	5 cut(s)	100, 114, 144, 259, 524
Lsp1109I	GCAGC	1 cut(s)	528
LweI	GCATC	4 cut(s)	425, 784, 1028, 1279
MaeI	CTAG	3 cut(s)	92, 1362, 1605
MaeII	ACGT	2 cut(s)	825, 901
MaeIII	GTNAC	7 cut(s)	393, 783, 842, 1229, 1277, 1334, 1484
MalI	GATC	9 cut(s)	145, 627, 851, 948, 954, 960, 966, 1152, 1248
MboI	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
MflI	RGATCY	1 cut(s)	849
MhlI	GDGCHC	1 cut(s)	141
MluCI	AATT	9 cut(s)	68, 113, 164, 526, 874, 1009, 1018, 1108, 1117
MlyI	GAGTC	3 cut(s)	179, 391, 757
MmeI	TCCRAC	1 cut(s)	213
Mph1103I	ATGCAT	1 cut(s)	1188
MseI	TTAA	5 cut(s)	360, 611, 891, 1142, 1242
MslI	CAYNNNNRTG	1 cut(s)	1191
MspI	CCGG	3 cut(s)	201, 340, 376
MspR9I	CCNGG	3 cut(s)	341, 370, 1083
MvaI	CCWGG	2 cut(s)	370, 1083
MwoI	GCNNNNNNNGC	7 cut(s)	235, 484, 522, 861, 1047, 1066, 1146
NciI	CCSGG	1 cut(s)	341
NcoI	CCATGG	1 cut(s)	233
NdeI	CATATG	1 cut(s)	553
NdeII	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
NlaIII	CATG	6 cut(s)	237, 491, 763, 1135, 1173, 1190
NlaIV	GGNNCC	4 cut(s)	324, 325, 344, 374
NmeAIII	GCCGAG	2 cut(s)	152, 1585
NmuCI	GTSAC	6 cut(s)	783, 842, 1229, 1277, 1334, 1484
NsiI	ATGCAT	1 cut(s)	1188
NspI	RCATGY	3 cut(s)	491, 1135, 1173
NspV	TTCGAA	2 cut(s)	285, 307
PaqCI	CACCTGC	1 cut(s)	1287
PceI	AGGCCT	1 cut(s)	1609
PciI	ACATGT	1 cut(s)	1169
PciSI	GCTCTTC	1 cut(s)	720
PcsI	WCGNNNNNNNCGW	2 cut(s)	291, 822
PfeI	GAWTC	5 cut(s)	332, 680, 1100, 1411, 1535
PfoI	TCCNGGA	1 cut(s)	1081
PinAI	ACCGGT	1 cut(s)	375
PkrI	GCNGC	2 cut(s)	477, 518
PleI	GAGTC	3 cut(s)	179, 390, 757
PpsI	GAGTC	3 cut(s)	179, 390, 757
PpuMI	RGGWCCY	1 cut(s)	323
PscI	ACATGT	1 cut(s)	1169
Psp124BI	GAGCTC	1 cut(s)	141
Psp1406I	AACGTT	1 cut(s)	825
Psp5II	RGGWCCY	1 cut(s)	323
Psp6I	CCWGG	2 cut(s)	368, 1081
PspGI	CCWGG	2 cut(s)	368, 1081
PspN4I	GGNNCC	4 cut(s)	324, 325, 344, 374
PspPI	GGNCC	7 cut(s)	217, 250, 323, 343, 373, 562, 1161
PspPPI	RGGWCCY	1 cut(s)	323
PstNI	CAGNNNCTG	1 cut(s)	522
PsuI	RGATCY	1 cut(s)	849
RsaI	GTAC	2 cut(s)	586, 801
RsaNI	GTAC	2 cut(s)	585, 800
RseI	CAYNNNNRTG	1 cut(s)	1191
SacI	GAGCTC	1 cut(s)	141
SapI	GCTCTTC	1 cut(s)	720
SaqAI	TTAA	5 cut(s)	360, 611, 891, 1142, 1242
SatI	GCNGC	2 cut(s)	476, 517
Sau3AI	GATC	9 cut(s)	143, 625, 849, 946, 952, 958, 964, 1150, 1246
Sau96I	GGNCC	7 cut(s)	217, 250, 323, 343, 373, 562, 1161
ScaI	AGTACT	1 cut(s)	801
SchI	GAGTC	3 cut(s)	179, 391, 757
ScrFI	CCNGG	3 cut(s)	341, 370, 1083
SduI	GDGCHC	1 cut(s)	141
SfaNI	GCATC	4 cut(s)	425, 784, 1028, 1279
SfcI	CTRYAG	1 cut(s)	1539
SfuI	TTCGAA	2 cut(s)	285, 307
SinI	GGWCC	5 cut(s)	217, 250, 323, 343, 373
SmiMI	CAYNNNNRTG	1 cut(s)	1191
Sse9I	AATT	9 cut(s)	68, 113, 164, 526, 874, 1009, 1018, 1108, 1117
SseBI	AGGCCT	1 cut(s)	1609
SsiI	CCGC	6 cut(s)	215, 238, 351, 475, 579, 601
SspMI	CTAG	3 cut(s)	92, 1362, 1605
SstI	GAGCTC	1 cut(s)	141
StuI	AGGCCT	1 cut(s)	1609
StyD4I	CCNGG	3 cut(s)	339, 368, 1081
StyI	CCWWGG	3 cut(s)	233, 327, 1264
TaaI	ACNGT	7 cut(s)	198, 399, 542, 589, 643, 1205, 1404
TaiI	ACGT	2 cut(s)	828, 904
TaqI	TCGA	6 cut(s)	285, 307, 335, 380, 401, 1249
TaqII	GACCGA	1 cut(s)	1412
TasI	AATT	9 cut(s)	68, 113, 164, 526, 874, 1009, 1018, 1108, 1117
TatI	WGTACW	1 cut(s)	799
TauI	GCSGC	1 cut(s)	478
TfiI	GAWTC	5 cut(s)	332, 680, 1100, 1411, 1535
Tru1I	TTAA	5 cut(s)	360, 611, 891, 1142, 1242
Tru9I	TTAA	5 cut(s)	360, 611, 891, 1142, 1242
TscAI	CASTG	3 cut(s)	690, 727, 1052
TseFI	GTSAC	6 cut(s)	783, 842, 1229, 1277, 1334, 1484
TseI	GCWGC	1 cut(s)	516
Tsp45I	GTSAC	6 cut(s)	783, 842, 1229, 1277, 1334, 1484
TspDTI	ATGAA	6 cut(s)	177, 516, 848, 1203, 1506, 1563
TspGWI	ACGGA	1 cut(s)	1487
TspRI	CASTG	3 cut(s)	690, 727, 1052
VpaK11BI	GGWCC	5 cut(s)	217, 250, 323, 343, 373
XapI	RAATTY	3 cut(s)	164, 874, 1018
XbaI	TCTAGA	1 cut(s)	1361
XceI	RCATGY	3 cut(s)	491, 1135, 1173
XcmI	CCANNNNNNNNNTGG	2 cut(s)	240, 1271
XmiI	GTMKAC	1 cut(s)	1371
XspI	CTAG	3 cut(s)	92, 1362, 1605
ZrmI	AGTACT	1 cut(s)	801
Zsp2I	ATGCAT	1 cut(s)	1188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.