Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006313

Physical Location & Seq

Genomic Coordinates Forward (+)

2108789 .. 2112504

Gene Structure 3716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1029300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGAACAAGCTTCTCATAGCCGGCCATGGTTCTCTCTATCCTCTCCTCAGAACCCACCTCAAAGCACCAAAATTTTTAGCCCCCATTTCCCAATTTCACAGCCTCAGAGAAACCCTAGCTCCCAATCCGAAGCTCGACTTCATAGTCAACGAAGTTAGAGAGATTCAATCGTCGAAGGACTCAAAACCCACAAACATAATCACCCAATTGGCGCCGGACGTTGGTGAACCCCCCGAGCAGGGCGGCTCGACCAGTGGGGAATGTTGTGCGGTTCAGATTTCGCATCCGTGGCGGGAGTGGGTGGACCTGATGGAGTGCTTGTTGAAAAGAGGATACTTTGATGGCGACGAGAACCCGTTTCGGAACGGTGAAGTGGGTCCGAAGGAATCGAACCGTATTCGAACCGCTTGTCTGAATTTTGCTCGGGACCGGTCTAGTCTTTTAAGGATGTTGTCAAGGAAAGATATCCAGATCATTGCCCGATGTGGATGCCCGAGCCTCGATAGGAAAGTCATCAACTCAGGAAAGCGTCTAAGGGCGTATGTGGGTGTTGATGAAGGAGATGTTTGCAGCTCCTGCAATTTGAGAGGAGACTGTGAGAGAGCGTACGTGAAGGCACGGGAAGATGAAGGTGGGCGCACAGTGGATGTCATGCGTTTCTTGTTAACGTATGGGCTTGATCCCACTACTGGTACAGTGGAGAACAAGCCATGTCTAAACAAAATGGTCAAAGACTCAGTGAGACGGCTACTGAAACAGATGGTAGGGGAGAGCACTCAGAACATCGACTCCAATCCCCCAAAGAGTACAAGTACAACCATAAAGAGGGTTGCTTCGGTGTCGGACCATTCAATTCCACAAGAAAAGGGCCAAATAAATGTTCCAATGAAGCCAGGCGACTGGCTTTGCCCCAAATGCAACTTCCTAAACTTTGCTAGAAATCTCAAGTGCCTTCGTTGCGATGATTTTTCCCAAGAAAGACTGACACGTCTAAGAGAGGAACAAGATCATCTTCCGTTGAAGAAGGGGGACTGGATATGTGACAAATGCAGTTTCTTAAATTTTGCGAAGAACGGTAGATGCTTACAATGCAAAGAGAAGCCTCCAAAGCGGCAGATAAATCCCGGGGAGTGGGAGTGCGACTCGTGCAATTATATCAACTTTAAGAGAAACATGGTGTGCTTAAAATGCGATCATAAAAGGCCTAAGGCAGCACATTCTTCAGAGGCTTCTGCTGAACCCGTACACGACGACGGAAGCTACCCTAGGACTAAGAGTTTGAGTTCTCCTCACACTACTGAGACGAGTCAATATGGACGAAGTCGAACTAGAGGTGCAGACAAGTGGAGATTTGTAAACGAAGAAGAAGACGACTGCAATCGCTCGAACGCATGGAATGAGGCTTCCGGGTTGGTAGATTTTCCCATCGCAGGAGGTAAGACCGAATTGTCTCAGAATCCGAAAAAAAGGGACTTGTGGAAGTTGAAGATGTTAGAGAGGAGCAAAAGCGCCTTGACGAATAAGGCAAACATTAACGAATCCAGTGTCAATATTCCAAAACGATTGGAGCTTTCTGATTCCACCGACGATGAAGAAATGTCAGAGTGGTTTGGGGATGGGAAACTGGAAACACCAAGGCTCCCATCAGTAGGTCAGAAATCGTTTGGGTTAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0016070 GO:0016071 GO:0016556 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1900865 GO:1900871 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UQ_con zf-RanBP

Protein Analysis

559

Amino Acids

62.99

Weight (kDa)

8.69

Isoelectric Point (pI)

48.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zn_ribbon_RanBP	PF00641	297 - 321	1.6e-07	Zn-finger in Ran binding protein and others

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006313)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70650 AT1G70650
fragaria_vesca	FvH4_4g33730
malus_domestica	MD13G1029300.v1.1
prunus_persica	Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1 Prupe.1G332300_v2.0.a1
pyrus_communis	pycom13g01790 pycom16g01760
rosa_chinensis	RchiOBHm_Chr4g0443241
rosa_laevigata	RLG00000005943 RLG00000005947
rosa_multiflora	Rmu_co8168196.1_g000001 Rmu_sc0007238.1_g000005 Rmu_sc0007968.1_g000002 Rmu_sc0018919.1_g000002
rosa_roxburghii	Rroxscaffold_5G00383810
rosa_rugosa	Rorug04G0344700 Rorug04G0345000
rosa_samantha	Rh4AG399700 Rh4BG411400 Rh4BG411500 Rh4CG426800 Rh4DG406600
rosa_wichuraiana	Rw4G034460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	143, 987, 1447
AccB1I	GGYRCC	1 cut(s)	211
AciI	CCGC	5 cut(s)	243, 269, 292, 405, 1111
AclWI	GGATC	1 cut(s)	674
AcoI	YGGCCR	1 cut(s)	22
AcsI	RAATTY	3 cut(s)	71, 415, 1060
AcuI	CTGAAG	1 cut(s)	1206
AcyI	GRCGYC	1 cut(s)	212
AfaI	GTAC	5 cut(s)	608, 694, 808, 814, 1245
AfiI	CCNNNNNNNGG	8 cut(s)	221, 238, 239, 689, 825, 1131, 1430, 1649
AflIII	ACRYGT	1 cut(s)	986
AgeI	ACCGGT	1 cut(s)	429
AgsI	TTSAA	5 cut(s)	167, 325, 852, 1021, 1486
AjiI	CACGTC	1 cut(s)	989
AjnI	CCWGG	1 cut(s)	892
AjuI	GAANNNNNNNTTGG	4 cut(s)	864, 896, 905, 937
AloI	GAACNNNNNNTCC	2 cut(s)	773, 805
AluBI	AGCT	6 cut(s)	10, 119, 133, 573, 1260, 1570
AluI	AGCT	6 cut(s)	10, 119, 133, 573, 1260, 1570
Alw21I	GWGCWC	1 cut(s)	776
Alw26I	GTCTC	4 cut(s)	585, 736, 1295, 1455
AlwI	GGATC	1 cut(s)	674
AlwNI	CAGNNNCTG	1 cut(s)	576
Ama87I	CYCGRG	4 cut(s)	233, 423, 493, 1124
AoxI	GGCC	3 cut(s)	22, 868, 1202
ApeKI	GCWGC	2 cut(s)	570, 1211
ApoI	RAATTY	3 cut(s)	71, 415, 1060
ArsI	GACNNNNNNTTYG	6 cut(s)	394, 426, 1261, 1293, 1530, 1562
AsiGI	ACCGGT	1 cut(s)	429
AspA2I	CCTAGG	1 cut(s)	1265
AspLEI	GCGC	3 cut(s)	214, 639, 1511
AspS9I	GGNCC	5 cut(s)	304, 377, 427, 844, 868
AsuC2I	CCSGG	3 cut(s)	1125, 1126, 1408
AsuHPI	GGTGA	3 cut(s)	193, 236, 380
AsuII	TTCGAA	1 cut(s)	400
AvaI	CYCGRG	4 cut(s)	233, 423, 493, 1124
AvaII	GGWCC	4 cut(s)	304, 377, 427, 844
AvrII	CCTAGG	1 cut(s)	1265
AxyI	CCTNAGG	1 cut(s)	1206
BanI	GGYRCC	1 cut(s)	211
BauI	CACGAG	1 cut(s)	1144
BbsI	GAAGAC	1 cut(s)	1374
Bbv12I	GWGCWC	1 cut(s)	776
BbvI	GCAGC	2 cut(s)	582, 1223
BccI	CCATC	6 cut(s)	304, 335, 754, 1433, 1610, 1651
BceAI	ACGGC	1 cut(s)	761
BcgI	CGANNNNNNTGC	2 cut(s)	471, 505
BciT130I	CCWGG	1 cut(s)	894
BciVI	GTATCC	1 cut(s)	326
BcnI	CCSGG	3 cut(s)	1125, 1126, 1408
BcoDI	GTCTC	4 cut(s)	585, 736, 1295, 1455
BfaI	CTAG	5 cut(s)	116, 435, 936, 1266, 1329
BfoI	RGCGCY	2 cut(s)	215, 1512
BfuI	GTATCC	1 cut(s)	326
BisI	GCNGC	4 cut(s)	244, 571, 1112, 1212
BlnI	CCTAGG	1 cut(s)	1265
BlsI	GCNGC	4 cut(s)	245, 572, 1113, 1213
Bme1390I	CCNGG	4 cut(s)	894, 1125, 1126, 1408
Bme18I	GGWCC	4 cut(s)	304, 377, 427, 844
BmeT110I	CYCGRG	4 cut(s)	233, 423, 493, 1124
BmgBI	CACGTC	1 cut(s)	989
BmgT120I	GGNCC	5 cut(s)	304, 377, 427, 844, 868
BmiI	GGNNCC	4 cut(s)	213, 378, 428, 1640
BmrFI	CCNGG	4 cut(s)	894, 1125, 1126, 1408
BmsI	GCATC	3 cut(s)	292, 479, 1070
BpiI	GAAGAC	1 cut(s)	1374
BplI	GAGNNNNNCTC	4 cut(s)	1127, 1159, 1273, 1305
Bpu14I	TTCGAA	1 cut(s)	400
BpuEI	CTTGAG	1 cut(s)	929
BpuMI	CCSGG	3 cut(s)	1125, 1126, 1408
BsaAI	YACGTR	1 cut(s)	610
BsaHI	GRCGYC	1 cut(s)	212
BsaJI	CCNNGG	6 cut(s)	25, 287, 1124, 1125, 1265, 1634
BsaWI	WCCGGW	1 cut(s)	429
Bsc4I	CCNNNNNNNGG	8 cut(s)	221, 238, 239, 689, 825, 1131, 1430, 1649
Bse118I	RCCGGY	2 cut(s)	20, 429
Bse1I	ACTGG	6 cut(s)	252, 694, 905, 1037, 1542, 1629
Bse21I	CCTNAGG	1 cut(s)	1206
Bse3DI	GCAATG	1 cut(s)	474
BseBI	CCWGG	1 cut(s)	894
BseDI	CCNNGG	6 cut(s)	25, 287, 1124, 1125, 1265, 1634
BseGI	GGATG	5 cut(s)	283, 453, 494, 652, 1621
BseLI	CCNNNNNNNGG	8 cut(s)	221, 238, 239, 689, 825, 1131, 1430, 1649
BseMI	GCAATG	1 cut(s)	474
BseMII	CTCAG	7 cut(s)	61, 118, 534, 750, 791, 1290, 1466
BseNI	ACTGG	6 cut(s)	252, 694, 905, 1037, 1542, 1629
BseRI	GAGGAG	4 cut(s)	35, 603, 1278, 1513
BseXI	GCAGC	2 cut(s)	582, 1223
BsgI	GTGCAG	1 cut(s)	1356
BshFI	GGCC	3 cut(s)	24, 870, 1204
BshNI	GGYRCC	1 cut(s)	211
BshTI	ACCGGT	1 cut(s)	429
BsiHKAI	GWGCWC	1 cut(s)	776
BsiHKCI	CYCGRG	4 cut(s)	233, 423, 493, 1124
BsiSI	CCGG	5 cut(s)	21, 215, 430, 1125, 1407
BsiWI	CGTACG	1 cut(s)	606
BslFI	GGGAC	3 cut(s)	440, 1043, 1484
BslI	CCNNNNNNNGG	8 cut(s)	221, 238, 239, 689, 825, 1131, 1430, 1649
BsmAI	GTCTC	4 cut(s)	585, 736, 1295, 1455
BsmBI	CGTCTC	2 cut(s)	736, 1295
BsmFI	GGGAC	3 cut(s)	440, 1043, 1484
BsnI	GGCC	3 cut(s)	24, 870, 1204
BsoBI	CYCGRG	4 cut(s)	233, 423, 493, 1124
Bsp119I	TTCGAA	1 cut(s)	400
Bsp1286I	GDGCHC	1 cut(s)	776
Bsp143I	GATC	4 cut(s)	471, 679, 1006, 1192
Bsp19I	CCATGG	1 cut(s)	25
BspACI	CCGC	5 cut(s)	243, 269, 292, 405, 1111
BspANI	GGCC	3 cut(s)	24, 870, 1204
BspCNI	CTCAG	7 cut(s)	60, 117, 533, 749, 790, 1291, 1465
BspLI	GGNNCC	4 cut(s)	213, 378, 428, 1640
BspPI	GGATC	1 cut(s)	674
BspT104I	TTCGAA	1 cut(s)	400
BspT107I	GGYRCC	1 cut(s)	211
BsrDI	GCAATG	1 cut(s)	474
BsrFI	RCCGGY	2 cut(s)	20, 429
BsrI	ACTGG	6 cut(s)	252, 694, 905, 1037, 1542, 1629
BssAI	RCCGGY	2 cut(s)	20, 429
BssECI	CCNNGG	6 cut(s)	25, 287, 1124, 1125, 1265, 1634
BssMI	GATC	4 cut(s)	471, 679, 1006, 1192
BssNI	GRCGYC	1 cut(s)	212
BssSI	CACGAG	1 cut(s)	1144
BssT1I	CCWWGG	3 cut(s)	25, 1265, 1634
Bst2BI	CACGAG	1 cut(s)	1144
Bst2UI	CCWGG	1 cut(s)	894
Bst4CI	ACNGT	6 cut(s)	368, 395, 596, 643, 697, 1076
BstACI	GRCGYC	1 cut(s)	212
BstAPI	GCANNNNNTGC	1 cut(s)	576
BstBAI	YACGTR	1 cut(s)	610
BstBI	TTCGAA	1 cut(s)	400
BstC8I	GCNNGC	1 cut(s)	22
BstDSI	CCRYGG	2 cut(s)	25, 287
BstF5I	GGATG	5 cut(s)	283, 453, 494, 652, 1621
BstH2I	RGCGCY	2 cut(s)	215, 1512
BstHHI	GCGC	3 cut(s)	214, 639, 1511
BstKTI	GATC	4 cut(s)	474, 682, 1009, 1195
BstMAI	GTCTC	4 cut(s)	585, 736, 1295, 1455
BstMBI	GATC	4 cut(s)	471, 679, 1006, 1192
BstMWI	GCNNNNNNNGC	8 cut(s)	289, 576, 915, 957, 1089, 1108, 1146, 1188
BstNI	CCWGG	1 cut(s)	894
BstSCI	CCNGG	4 cut(s)	892, 1123, 1124, 1406
BstV1I	GCAGC	2 cut(s)	582, 1223
BstV2I	GAAGAC	1 cut(s)	1374
BstXI	CCANNNNNNTGG	1 cut(s)	900
Bsu36I	CCTNAGG	1 cut(s)	1206
BsuI	GTATCC	1 cut(s)	326
BsuRI	GGCC	3 cut(s)	24, 870, 1204
BtgI	CCRYGG	2 cut(s)	25, 287
BtgZI	GCGATG	2 cut(s)	975, 1411
BtrI	CACGTC	1 cut(s)	989
BtsCI	GGATG	5 cut(s)	283, 453, 494, 652, 1621
BtsIMutI	CAGTG	5 cut(s)	259, 648, 702, 744, 1549
Cac8I	GCNNGC	1 cut(s)	22
CaiI	CAGNNNCTG	1 cut(s)	576
CfoI	GCGC	3 cut(s)	214, 639, 1511
Cfr10I	RCCGGY	2 cut(s)	20, 429
Cfr13I	GGNCC	5 cut(s)	304, 377, 427, 844, 868
Cfr9I	CCCGGG	1 cut(s)	1124
CseI	GACGC	1 cut(s)	518
Csp6I	GTAC	5 cut(s)	607, 693, 807, 813, 1244
CspAI	ACCGGT	1 cut(s)	429
CviAII	CATG	5 cut(s)	26, 652, 711, 1174, 1392
CviQI	GTAC	5 cut(s)	607, 693, 807, 813, 1244
DinI	GGCGCC	1 cut(s)	213
DpnI	GATC	4 cut(s)	473, 681, 1008, 1194
DpnII	GATC	4 cut(s)	471, 679, 1006, 1192
DrdI	GACNNNNNNGTC	3 cut(s)	143, 987, 1447
DseDI	GACNNNNNNGTC	3 cut(s)	143, 987, 1447
EaeI	YGGCCR	1 cut(s)	22
Eco130I	CCWWGG	3 cut(s)	25, 1265, 1634
Eco147I	AGGCCT	1 cut(s)	1204
Eco32I	GATATC	1 cut(s)	466
Eco47I	GGWCC	4 cut(s)	304, 377, 427, 844
Eco57I	CTGAAG	1 cut(s)	1206
Eco81I	CCTNAGG	1 cut(s)	1206
Eco88I	CYCGRG	4 cut(s)	233, 423, 493, 1124
EcoRII	CCWGG	1 cut(s)	892
EcoRV	GATATC	1 cut(s)	466
EcoT14I	CCWWGG	3 cut(s)	25, 1265, 1634
EgeI	GGCGCC	1 cut(s)	213
EheI	GGCGCC	1 cut(s)	213
ErhI	CCWWGG	3 cut(s)	25, 1265, 1634
Esp3I	CGTCTC	2 cut(s)	736, 1295
FaeI	CATG	5 cut(s)	29, 655, 714, 1177, 1395
FalI	AAGNNNNNCTT	4 cut(s)	122, 154, 996, 1028
FaqI	GGGAC	3 cut(s)	440, 1043, 1484
FatI	CATG	5 cut(s)	25, 651, 710, 1173, 1391
FauI	CCCGC	1 cut(s)	285
Fnu4HI	GCNGC	4 cut(s)	244, 571, 1112, 1212
FokI	GGATG	5 cut(s)	270, 460, 501, 659, 1628
Fsp4HI	GCNGC	4 cut(s)	244, 571, 1112, 1212
FspBI	CTAG	5 cut(s)	116, 435, 936, 1266, 1329
GlaI	GCGC	3 cut(s)	213, 638, 1510
GluI	GCNGC	4 cut(s)	244, 571, 1112, 1212
HaeII	RGCGCY	2 cut(s)	215, 1512
HaeIII	GGCC	3 cut(s)	24, 870, 1204
HapII	CCGG	5 cut(s)	21, 215, 430, 1125, 1407
HgaI	GACGC	1 cut(s)	518
HhaI	GCGC	3 cut(s)	214, 639, 1511
Hin1I	GRCGYC	1 cut(s)	212
Hin1II	CATG	5 cut(s)	29, 655, 714, 1177, 1395
Hin6I	GCGC	3 cut(s)	212, 637, 1509
HinP1I	GCGC	3 cut(s)	212, 637, 1509
HincII	GTYRAC	2 cut(s)	148, 666
HindII	GTYRAC	2 cut(s)	148, 666
HindIII	AAGCTT	1 cut(s)	8
HpaI	GTTAAC	1 cut(s)	666
HpaII	CCGG	5 cut(s)	21, 215, 430, 1125, 1407
HphI	GGTGA	3 cut(s)	193, 236, 380
Hpy166II	GTNNAC	6 cut(s)	148, 227, 304, 666, 1246, 1357
Hpy188III	TCNNGA	3 cut(s)	425, 469, 522
Hpy8I	GTNNAC	6 cut(s)	148, 227, 304, 666, 1246, 1357
Hpy99I	CGWCG	5 cut(s)	175, 350, 1253, 1256, 1589
HpyAV	CCTTC	7 cut(s)	169, 376, 551, 607, 623, 962, 1018
HpyCH4III	ACNGT	6 cut(s)	368, 395, 596, 643, 697, 1076
HpyCH4IV	ACGT	4 cut(s)	219, 609, 668, 988
HpyCH4V	TGCA	8 cut(s)	570, 579, 918, 1050, 1092, 1149, 1337, 1377
HpyF10VI	GCNNNNNNNGC	8 cut(s)	289, 576, 915, 957, 1089, 1108, 1146, 1188
HpySE526I	ACGT	4 cut(s)	219, 609, 668, 988
Hsp92I	GRCGYC	1 cut(s)	212
Hsp92II	CATG	5 cut(s)	29, 655, 714, 1177, 1395
HspAI	GCGC	3 cut(s)	212, 637, 1509
KasI	GGCGCC	1 cut(s)	211
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
KspAI	GTTAAC	1 cut(s)	666
Kzo9I	GATC	4 cut(s)	471, 679, 1006, 1192
LmnI	GCTCC	5 cut(s)	124, 578, 1500, 1567, 1644
Lsp1109I	GCAGC	2 cut(s)	582, 1223
LweI	GCATC	3 cut(s)	292, 479, 1070
MaeI	CTAG	5 cut(s)	116, 435, 936, 1266, 1329
MaeII	ACGT	4 cut(s)	219, 609, 668, 988
MaeIII	GTNAC	1 cut(s)	1040
MalI	GATC	4 cut(s)	473, 681, 1008, 1194
MboI	GATC	4 cut(s)	471, 679, 1006, 1192
MfeI	CAATTG	1 cut(s)	206
MhlI	GDGCHC	1 cut(s)	776
MluCI	AATT	9 cut(s)	71, 92, 206, 415, 580, 852, 1060, 1150, 1445
Mly113I	GGCGCC	1 cut(s)	212
MlyI	GAGTC	5 cut(s)	173, 728, 782, 1136, 1315
MmeI	TCCRAC	1 cut(s)	822
MroNI	GCCGGC	1 cut(s)	20
MseI	TTAA	6 cut(s)	443, 665, 1058, 1164, 1184, 1533
MspI	CCGG	5 cut(s)	21, 215, 430, 1125, 1407
MspR9I	CCNGG	4 cut(s)	894, 1125, 1126, 1408
MunI	CAATTG	1 cut(s)	206
MvaI	CCWGG	1 cut(s)	894
MwoI	GCNNNNNNNGC	8 cut(s)	289, 576, 915, 957, 1089, 1108, 1146, 1188
NaeI	GCCGGC	1 cut(s)	22
NarI	GGCGCC	1 cut(s)	212
NciI	CCSGG	3 cut(s)	1125, 1126, 1408
NcoI	CCATGG	1 cut(s)	25
NdeII	GATC	4 cut(s)	471, 679, 1006, 1192
NgoMIV	GCCGGC	1 cut(s)	20
NlaIII	CATG	5 cut(s)	29, 655, 714, 1177, 1395
NlaIV	GGNNCC	4 cut(s)	213, 378, 428, 1640
NmuCI	GTSAC	1 cut(s)	1040
NspV	TTCGAA	1 cut(s)	400
PceI	AGGCCT	1 cut(s)	1204
PdiI	GCCGGC	1 cut(s)	22
PfeI	GAWTC	5 cut(s)	163, 386, 1456, 1538, 1577
Pfl23II	CGTACG	1 cut(s)	606
PflFI	GACNNNGTC	1 cut(s)	1320
PinAI	ACCGGT	1 cut(s)	429
PkrI	GCNGC	4 cut(s)	245, 572, 1113, 1213
PleI	GAGTC	5 cut(s)	173, 728, 782, 1136, 1314
PluTI	GGCGCC	1 cut(s)	215
PpsI	GAGTC	5 cut(s)	173, 728, 782, 1136, 1314
Ppu21I	YACGTR	1 cut(s)	610
Psp6I	CCWGG	1 cut(s)	892
PspGI	CCWGG	1 cut(s)	892
PspLI	CGTACG	1 cut(s)	606
PspN4I	GGNNCC	4 cut(s)	213, 378, 428, 1640
PspPI	GGNCC	5 cut(s)	304, 377, 427, 844, 868
PstNI	CAGNNNCTG	1 cut(s)	576
PsyI	GACNNNGTC	1 cut(s)	1320
RsaI	GTAC	5 cut(s)	608, 694, 808, 814, 1245
RsaNI	GTAC	5 cut(s)	607, 693, 807, 813, 1244
SaqAI	TTAA	6 cut(s)	443, 665, 1058, 1164, 1184, 1533
SatI	GCNGC	4 cut(s)	244, 571, 1112, 1212
Sau3AI	GATC	4 cut(s)	471, 679, 1006, 1192
Sau96I	GGNCC	5 cut(s)	304, 377, 427, 844, 868
SchI	GAGTC	5 cut(s)	173, 728, 782, 1136, 1315
ScrFI	CCNGG	4 cut(s)	894, 1125, 1126, 1408
SduI	GDGCHC	1 cut(s)	776
SfaNI	GCATC	3 cut(s)	292, 479, 1070
SfoI	GGCGCC	1 cut(s)	213
SfuI	TTCGAA	1 cut(s)	400
SinI	GGWCC	4 cut(s)	304, 377, 427, 844
SmaI	CCCGGG	1 cut(s)	1126
SmlI	CTYRAG	1 cut(s)	944
SmoI	CTYRAG	1 cut(s)	944
Sse9I	AATT	9 cut(s)	71, 92, 206, 415, 580, 852, 1060, 1150, 1445
SseBI	AGGCCT	1 cut(s)	1204
SsiI	CCGC	5 cut(s)	243, 269, 292, 405, 1111
SspDI	GGCGCC	1 cut(s)	211
SspI	AATATT	1 cut(s)	1552
SspMI	CTAG	5 cut(s)	116, 435, 936, 1266, 1329
StuI	AGGCCT	1 cut(s)	1204
StyD4I	CCNGG	4 cut(s)	892, 1123, 1124, 1406
StyI	CCWWGG	3 cut(s)	25, 1265, 1634
TaaI	ACNGT	6 cut(s)	368, 395, 596, 643, 697, 1076
TaiI	ACGT	4 cut(s)	222, 612, 671, 991
TaqI	TCGA	9 cut(s)	135, 173, 248, 389, 400, 501, 786, 1324, 1385
TaqII	GACCGA	1 cut(s)	1457
TasI	AATT	9 cut(s)	71, 92, 206, 415, 580, 852, 1060, 1150, 1445
TatI	WGTACW	2 cut(s)	806, 812
TauI	GCSGC	2 cut(s)	246, 1114
TfiI	GAWTC	5 cut(s)	163, 386, 1456, 1538, 1577
Tru1I	TTAA	6 cut(s)	443, 665, 1058, 1164, 1184, 1533
Tru9I	TTAA	6 cut(s)	443, 665, 1058, 1164, 1184, 1533
TscAI	CASTG	5 cut(s)	259, 648, 702, 744, 1549
TseFI	GTSAC	1 cut(s)	1040
TseI	GCWGC	2 cut(s)	570, 1211
Tsp45I	GTSAC	1 cut(s)	1040
TspDTI	ATGAA	6 cut(s)	17, 130, 570, 642, 902, 1605
TspGWI	ACGGA	3 cut(s)	276, 1005, 1269
TspMI	CCCGGG	1 cut(s)	1124
TspRI	CASTG	5 cut(s)	259, 648, 702, 744, 1549
Tth111I	GACNNNGTC	1 cut(s)	1320
VpaK11BI	GGWCC	4 cut(s)	304, 377, 427, 844
XapI	RAATTY	3 cut(s)	71, 415, 1060
XmaI	CCCGGG	1 cut(s)	1124
XmaJI	CCTAGG	1 cut(s)	1265
XspI	CTAG	5 cut(s)	116, 435, 936, 1266, 1329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.