Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0005814

Physical Location & Seq

Genomic Coordinates Forward (+)

32508270 .. 32513720

Gene Structure 5451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g35040.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGATGCTTCATCGCTTAACAGCCACAACAATGTTCCTCTCATCTTCTCCACCTAAACTCTTATCCCAACTCAGACACTCCTACTCTGTTCTCTCCAACCCTTCATCCCCAGCTCGTATCAGCTTGATTTGGCTCAACCACCCCCGCCGTTTCGCCACCGCCGCCGCCGCCGCCGCCGCCGCCAAGGGAGGAGACACGTTTTTCGCCGAGGAAAACGTTTCGTGGACTTCACTTGGTTTGTCCGATAAGGTCTCTCAAGCTCTCTTCAATGCCGGCCTCGGCCAACCCTCTCTTGTTCAGGCGGCTTGCATACCATCTATACTTTCGGGGAAGGATGTGATTGTTGCAGCTGAAACGGGTAGTGGTAAAACGCACAGTTTTCTTGTCCCTATAATCGATAAGCTTTGTAATGGGCAAGAAGAGTCTGGGAATGCTGCTGAGGATTCTGATCAAGGAGTGTCCTCGGTCCGAAAGATTTCTCTGGTACTTTGTCCAAATGTAACGCTTTGCGATCAAGTGGTTCGAATGGCCAATGGTCTTTGTGGAGAAAATGGTGAACCCCTTCTGAGAGCCACATCACTTTGTGGTCGACAGGGCTGGCCAGTTAATGATCCTGATATTGTTGTTTCAACACCTGCGGCTCTTCTGAATAATATTGACCCAAACAAATATAAGTTTCGTCGCATGGAGTTTACACGGCGTGTAAAATATGTGGTGTTTGATGAAGCAGATATGCTTCTCAATGGGGGTTACCAAAATAAGGTTATTCGTCTCATAAACTTTCTCCGGTTTGATGAAAAGCTGTTGTCCCGCTCAAATGGATCTAATGGATCTGCATCAGAGTTGCCATTGGACTTGGAATCTGAAAGTTCATTGCATTTTAGTTCGGAAGATGAAGAAGATATAGAGACCGAAGCTGTCTCAGAAGACGAGGAAAACTTTGAAGATGATGTTGATGATTCACCTGAGGCTGGGACTGGGAAGGTCAAATATAGAGACTGGAGAAGAGTGAGAAAAACTTATACGCGCAGTAAGCAGTACATATTTGTCGCAGCCACTCTTCCATCAAATGGGAAGAGAACTGCCGGGGCAGTGTTGAAAAAAATGTTTACAGATGCCATTTGGGTTAACGGAAACTACCTCCATTGTCACAATCCCAGATTAAAGCAAAGGTGGATTGAAACAACATTTGATACTCAGGTGGATGAACTTATAAAGGCTGTGAATCATGGATTTAAATCCAGATCGGTGGAATATGATTCTGGTCAATGCCGCACAATGGTATTTGCAAATACTGTTGATGCTGTGGAATCAGTGGCTAAAATATTGACGAGTGCTGGGATTGAATGCTACCTTTACCATAAAGACTGCTCCTTGGAAGACCGTGCAAAGACATTGGTTGATTTCCAAGAGAAAGGTGGAATTCTTGTTTGCACTGATGCTGCTGCACGTGGTATTGACATTCCAAATGTATCACATGTTATTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTATACACAGGGTTGGTCGCACAGCTAGAGCTGGTCAGTATGGACTTGTAACTAGTATGTATAATGAATCCAACCGGGATTTGGTTGCTGCAGTTCGTCGATCAGGGGAACTTGATATGCCTGTGGAGACAGCATTTAGCAGGAAAAGAAGTTTTCGGAATAAGATTAAGAAGAGAGCGGCTTTGAAAAGAATCACGGACTCATCAGCTGCCGAAAAGAGGGCTCTAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

583

Amino Acids

64.1

Weight (kDa)

7.15

Isoelectric Point (pI)

45.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	99 - 263	4.4e-24	DEAD/DEAH box helicase
Helicase_C	PF00271	424 - 517	5e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59990 AT1G59990
fragaria_vesca	FvH4_4g35040 FvH4_4g35040 FvH4_4g35040 FvH4_4g35040
malus_domestica	MD00G1145400.v1.1 MD12G1027800.v1.1 MD13G1086600.v1.1 MD16G1086400.v1.1 MD16G1086500.v1.1
prunus_persica	Prupe.1G260000_v2.0.a1 Prupe.1G260000_v2.0.a1
pyrus_communis	pycom16g07460
rosa_chinensis	RchiOBHm_Chr4g0444581
rosa_laevigata	RLG00000005820
rosa_multiflora	Rmu_sc0003839.1_g000002 Rmu_sc0015511.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385030
rosa_rugosa	Rorug04G0354000 Rorug04G0354000 Rorug04G0354100 Rorug04G0354100
rosa_samantha	Rh4AG414000 Rh4BG425800 Rh4CG440400 Rh4DG421400
rosa_wichuraiana	Rw4G035570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1214
AarI	CACCTGC	1 cut(s)	643
Acc36I	ACCTGC	1 cut(s)	643
AccB7I	CCANNNNNTGG	1 cut(s)	1070
AccBSI	CCGCTC	2 cut(s)	813, 1694
AccI	GTMKAC	1 cut(s)	589
AccII	CGCG	1 cut(s)	1027
AclI	AACGTT	1 cut(s)	216
AclWI	GGATC	3 cut(s)	605, 829, 838
AcoI	YGGCCR	3 cut(s)	280, 528, 599
AcsI	RAATTY	1 cut(s)	1422
AcvI	CACGTG	1 cut(s)	1451
AdeI	CACNNNGTG	2 cut(s)	584, 701
AfaI	GTAC	2 cut(s)	486, 1040
AfiI	CCNNNNNNNGG	6 cut(s)	760, 971, 1070, 1279, 1597, 1734
AflIII	ACRYGT	2 cut(s)	195, 1477
AgsI	TTSAA	7 cut(s)	268, 630, 944, 1099, 1181, 1346, 1702
AhlI	ACTAGT	1 cut(s)	1568
Alw26I	GTCTC	7 cut(s)	186, 256, 776, 902, 925, 990, 1637
AlwI	GGATC	3 cut(s)	605, 829, 838
AoxI	GGCC	4 cut(s)	274, 280, 528, 599
ApeKI	GCWGC	7 cut(s)	347, 434, 1052, 1442, 1445, 1604, 1724
ApoI	RAATTY	1 cut(s)	1422
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
Asp700I	GAANNNNTTC	2 cut(s)	475, 561
AspLEI	GCGC	1 cut(s)	1029
AspS9I	GGNCC	1 cut(s)	466
AsuC2I	CCSGG	2 cut(s)	1087, 1592
AsuHPI	GGTGA	2 cut(s)	566, 954
AsuII	TTCGAA	1 cut(s)	523
AvaII	GGWCC	1 cut(s)	466
AxyI	CCTNAGG	1 cut(s)	966
BaeI	ACNNNNGTAYC	2 cut(s)	1185, 1218
BalI	TGGCCA	2 cut(s)	530, 601
BanII	GRGCYC	1 cut(s)	1741
BbrPI	CACGTG	1 cut(s)	1451
BbsI	GAAGAC	2 cut(s)	933, 1386
BbvCI	CCTCAGC	1 cut(s)	438
BbvI	GCAGC	7 cut(s)	359, 421, 1064, 1429, 1432, 1591, 1711
BccI	CCATC	2 cut(s)	322, 1072
BceAI	ACGGC	2 cut(s)	132, 713
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	2 cut(s)	1087, 1592
BcoDI	GTCTC	7 cut(s)	186, 256, 776, 902, 925, 990, 1637
BcuI	ACTAGT	1 cut(s)	1568
BfaI	CTAG	3 cut(s)	1542, 1569, 1742
BfmI	CTRYAG	2 cut(s)	1509, 1605
BfuAI	ACCTGC	1 cut(s)	643
Bme1390I	CCNGG	2 cut(s)	1087, 1592
Bme18I	GGWCC	1 cut(s)	466
BmgT120I	GGNCC	1 cut(s)	466
BmrFI	CCNGG	2 cut(s)	1087, 1592
BmrI	ACTGGG	1 cut(s)	987
BmsI	GCATC	4 cut(s)	845, 1105, 1291, 1429
BmuI	ACTGGG	1 cut(s)	987
BpiI	GAAGAC	2 cut(s)	933, 1386
BpmI	CTGGAG	1 cut(s)	1021
Bpu10I	CCTNAGC	1 cut(s)	438
Bpu14I	TTCGAA	1 cut(s)	523
BpuEI	CTTGAG	1 cut(s)	240
BpuMI	CCSGG	2 cut(s)	1087, 1592
Bsa29I	ATCGAT	1 cut(s)	396
BsaAI	YACGTR	1 cut(s)	1451
BsaBI	GATNNNNATC	3 cut(s)	447, 835, 1237
BsaI	GGTCTC	2 cut(s)	256, 902
BsaJI	CCNNGG	6 cut(s)	183, 207, 277, 462, 1086, 1374
BsaWI	WCCGGW	1 cut(s)	786
Bsc4I	CCNNNNNNNGG	6 cut(s)	760, 971, 1070, 1279, 1597, 1734
Bse118I	RCCGGY	1 cut(s)	272
Bse1I	ACTGG	3 cut(s)	602, 982, 1004
Bse21I	CCTNAGG	1 cut(s)	966
Bse3DI	GCAATG	1 cut(s)	872
Bse8I	GATNNNNATC	3 cut(s)	447, 835, 1237
BseCI	ATCGAT	1 cut(s)	396
BseDI	CCNNGG	6 cut(s)	183, 207, 277, 462, 1086, 1374
BseGI	GGATG	3 cut(s)	104, 340, 1210
BseJI	GATNNNNATC	3 cut(s)	447, 835, 1237
BseLI	CCNNNNNNNGG	6 cut(s)	760, 971, 1070, 1279, 1597, 1734
BseMI	GCAATG	1 cut(s)	872
BseMII	CTCAG	6 cut(s)	85, 429, 557, 936, 957, 1211
BseNI	ACTGG	3 cut(s)	602, 982, 1004
BseRI	GAGGAG	1 cut(s)	204
BseXI	GCAGC	7 cut(s)	359, 421, 1064, 1429, 1432, 1591, 1711
BseYI	CCCAGC	3 cut(s)	109, 971, 1337
BsgI	GTGCAG	1 cut(s)	1431
Bsh1236I	CGCG	1 cut(s)	1027
BshFI	GGCC	4 cut(s)	276, 282, 530, 601
BshVI	ATCGAT	1 cut(s)	396
BsiSI	CCGG	4 cut(s)	273, 787, 1086, 1591
BslFI	GGGAC	3 cut(s)	371, 793, 988
BslI	CCNNNNNNNGG	6 cut(s)	760, 971, 1070, 1279, 1597, 1734
BsmAI	GTCTC	7 cut(s)	186, 256, 776, 902, 925, 990, 1637
BsmBI	CGTCTC	1 cut(s)	776
BsmFI	GGGAC	3 cut(s)	371, 793, 988
BsmI	GAATGC	2 cut(s)	436, 1352
BsnI	GGCC	4 cut(s)	276, 282, 530, 601
Bso31I	GGTCTC	2 cut(s)	256, 902
Bsp119I	TTCGAA	1 cut(s)	523
Bsp1286I	GDGCHC	1 cut(s)	1741
Bsp143I	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
BspANI	GGCC	4 cut(s)	276, 282, 530, 601
BspCNI	CTCAG	6 cut(s)	84, 430, 558, 935, 958, 1210
BspDI	ATCGAT	1 cut(s)	396
BspFNI	CGCG	1 cut(s)	1027
BspMAI	CTGCAG	1 cut(s)	1609
BspMI	ACCTGC	1 cut(s)	643
BspPI	GGATC	3 cut(s)	605, 829, 838
BspQI	GCTCTTC	1 cut(s)	648
BspT104I	TTCGAA	1 cut(s)	523
BspTNI	GGTCTC	2 cut(s)	256, 902
BsrBI	CCGCTC	2 cut(s)	813, 1694
BsrDI	GCAATG	1 cut(s)	872
BsrFI	RCCGGY	1 cut(s)	272
BsrI	ACTGG	3 cut(s)	602, 982, 1004
BssAI	RCCGGY	1 cut(s)	272
BssECI	CCNNGG	6 cut(s)	183, 207, 277, 462, 1086, 1374
BssMI	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
BssT1I	CCWWGG	2 cut(s)	183, 1374
Bst4CI	ACNGT	3 cut(s)	377, 1297, 1385
Bst6I	CTCTTC	7 cut(s)	269, 414, 648, 1000, 1065, 1070, 1682
BstAPI	GCANNNNNTGC	1 cut(s)	1496
BstBAI	YACGTR	1 cut(s)	1451
BstBI	TTCGAA	1 cut(s)	523
BstC8I	GCNNGC	3 cut(s)	274, 307, 599
BstDEI	CTNAG	6 cut(s)	71, 438, 566, 922, 966, 1197
BstEII	GGTNACC	1 cut(s)	749
BstF5I	GGATG	3 cut(s)	104, 340, 1210
BstFNI	CGCG	1 cut(s)	1027
BstHHI	GCGC	1 cut(s)	1029
BstKTI	GATC	7 cut(s)	451, 514, 613, 824, 833, 1247, 1619
BstMAI	GTCTC	7 cut(s)	186, 256, 776, 902, 925, 990, 1637
BstMBI	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
BstMWI	GCNNNNNNNGC	9 cut(s)	161, 167, 170, 173, 176, 179, 1033, 1496, 1505
BstNSI	RCATGY	1 cut(s)	1481
BstPI	GGTNACC	1 cut(s)	749
BstSCI	CCNGG	2 cut(s)	1085, 1590
BstSFI	CTRYAG	2 cut(s)	1509, 1605
BstUI	CGCG	1 cut(s)	1027
BstV1I	GCAGC	7 cut(s)	359, 421, 1064, 1429, 1432, 1591, 1711
BstV2I	GAAGAC	2 cut(s)	933, 1386
BstX2I	RGATCY	2 cut(s)	821, 830
BstXI	CCANNNNNNTGG	1 cut(s)	1249
BstYI	RGATCY	2 cut(s)	821, 830
Bsu15I	ATCGAT	1 cut(s)	396
Bsu36I	CCTNAGG	1 cut(s)	966
BsuRI	GGCC	4 cut(s)	276, 282, 530, 601
BsuTUI	ATCGAT	1 cut(s)	396
BtsCI	GGATG	3 cut(s)	104, 340, 1210
BtsI	GCAGTG	1 cut(s)	1098
BtsIMutI	CAGTG	3 cut(s)	1098, 1320, 1434
BveI	ACCTGC	1 cut(s)	643
Cac8I	GCNNGC	3 cut(s)	274, 307, 599
CfoI	GCGC	1 cut(s)	1029
Cfr10I	RCCGGY	1 cut(s)	272
Cfr13I	GGNCC	1 cut(s)	466
ClaI	ATCGAT	1 cut(s)	396
CpoI	CGGWCCG	1 cut(s)	466
Csp6I	GTAC	2 cut(s)	485, 1039
CspI	CGGWCCG	1 cut(s)	466
CviAII	CATG	3 cut(s)	685, 1229, 1478
CviQI	GTAC	2 cut(s)	485, 1039
DdeI	CTNAG	6 cut(s)	71, 438, 566, 922, 966, 1197
DpnI	GATC	7 cut(s)	450, 513, 612, 823, 832, 1246, 1618
DpnII	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
DraI	TTTAAA	1 cut(s)	1237
DraIII	CACNNNGTG	2 cut(s)	584, 701
EaeI	YGGCCR	3 cut(s)	280, 528, 599
Eam1104I	CTCTTC	7 cut(s)	269, 414, 648, 1000, 1065, 1070, 1682
EarI	CTCTTC	7 cut(s)	269, 414, 648, 1000, 1065, 1070, 1682
Eco130I	CCWWGG	2 cut(s)	183, 1374
Eco24I	GRGCYC	1 cut(s)	1741
Eco31I	GGTCTC	2 cut(s)	256, 902
Eco47I	GGWCC	1 cut(s)	466
Eco72I	CACGTG	1 cut(s)	1451
Eco81I	CCTNAGG	1 cut(s)	966
Eco91I	GGTNACC	1 cut(s)	749
EcoO65I	GGTNACC	1 cut(s)	749
EcoRI	GAATTC	1 cut(s)	1422
EcoT14I	CCWWGG	2 cut(s)	183, 1374
EcoT38I	GRGCYC	1 cut(s)	1741
ErhI	CCWWGG	2 cut(s)	183, 1374
Esp3I	CGTCTC	1 cut(s)	776
FaeI	CATG	3 cut(s)	688, 1232, 1481
FaqI	GGGAC	3 cut(s)	371, 793, 988
FatI	CATG	3 cut(s)	684, 1228, 1477
FauI	CCCGC	2 cut(s)	152, 818
FbaI	TGATCA	1 cut(s)	448
FblI	GTMKAC	1 cut(s)	589
FokI	GGATG	3 cut(s)	91, 347, 1217
FriOI	GRGCYC	1 cut(s)	1741
FspBI	CTAG	3 cut(s)	1542, 1569, 1742
GlaI	GCGC	1 cut(s)	1028
GsaI	CCCAGC	3 cut(s)	113, 975, 1341
GsuI	CTGGAG	1 cut(s)	1021
HaeIII	GGCC	4 cut(s)	276, 282, 530, 601
HapII	CCGG	4 cut(s)	273, 787, 1086, 1591
HhaI	GCGC	1 cut(s)	1029
Hin1II	CATG	3 cut(s)	688, 1232, 1481
Hin6I	GCGC	1 cut(s)	1027
HinP1I	GCGC	1 cut(s)	1027
HincII	GTYRAC	2 cut(s)	590, 1129
HindII	GTYRAC	2 cut(s)	590, 1129
HindIII	AAGCTT	1 cut(s)	401
HpaI	GTTAAC	1 cut(s)	1129
HpaII	CCGG	4 cut(s)	273, 787, 1086, 1591
HphI	GGTGA	2 cut(s)	566, 954
Hpy166II	GTNNAC	6 cut(s)	225, 557, 590, 693, 1110, 1129
Hpy188III	TCNNGA	2 cut(s)	614, 1242
Hpy8I	GTNNAC	6 cut(s)	225, 557, 590, 693, 1110, 1129
Hpy99I	CGWCG	2 cut(s)	684, 1617
HpyAV	CCTTC	4 cut(s)	111, 325, 572, 976
HpyCH4III	ACNGT	3 cut(s)	377, 1297, 1385
HpyCH4IV	ACGT	3 cut(s)	197, 216, 1450
HpyCH4V	TGCA	9 cut(s)	309, 347, 836, 877, 1289, 1388, 1434, 1448, 1607
HpyF10VI	GCNNNNNNNGC	9 cut(s)	161, 167, 170, 173, 176, 179, 1033, 1496, 1505
HpyF3I	CTNAG	6 cut(s)	71, 438, 566, 922, 966, 1197
HpySE526I	ACGT	3 cut(s)	197, 216, 1450
Hsp92II	CATG	3 cut(s)	688, 1232, 1481
HspAI	GCGC	1 cut(s)	1027
KroI	GCCGGC	1 cut(s)	272
KroNI	GCCGGC	1 cut(s)	274
Ksp22I	TGATCA	1 cut(s)	448
KspAI	GTTAAC	1 cut(s)	1129
Kzo9I	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
LguI	GCTCTTC	1 cut(s)	648
LmnI	GCTCC	1 cut(s)	1376
Lsp1109I	GCAGC	7 cut(s)	359, 421, 1064, 1429, 1432, 1591, 1711
LweI	GCATC	4 cut(s)	845, 1105, 1291, 1429
MaeI	CTAG	3 cut(s)	1542, 1569, 1742
MaeII	ACGT	3 cut(s)	197, 216, 1450
MaeIII	GTNAC	4 cut(s)	499, 749, 1148, 1564
MalI	GATC	7 cut(s)	450, 513, 612, 823, 832, 1246, 1618
MbiI	CCGCTC	2 cut(s)	813, 1694
MboI	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
MflI	RGATCY	2 cut(s)	821, 830
MhlI	GDGCHC	1 cut(s)	1741
MlsI	TGGCCA	2 cut(s)	530, 601
MluCI	AATT	1 cut(s)	1422
MluNI	TGGCCA	2 cut(s)	530, 601
MlyI	GAGTC	2 cut(s)	431, 1709
MmeI	TCCRAC	2 cut(s)	120, 1611
Mox20I	TGGCCA	2 cut(s)	530, 601
MroNI	GCCGGC	1 cut(s)	272
MroXI	GAANNNNTTC	2 cut(s)	475, 561
MscI	TGGCCA	2 cut(s)	530, 601
MseI	TTAA	6 cut(s)	17, 606, 1128, 1163, 1236, 1683
MslI	CAYNNNNRTG	1 cut(s)	29
Msp20I	TGGCCA	2 cut(s)	530, 601
MspA1I	CMGCKG	2 cut(s)	350, 1724
MspI	CCGG	4 cut(s)	273, 787, 1086, 1591
MspR9I	CCNGG	2 cut(s)	1087, 1592
Mva1269I	GAATGC	2 cut(s)	436, 1352
MvnI	CGCG	1 cut(s)	1027
MwoI	GCNNNNNNNGC	9 cut(s)	161, 167, 170, 173, 176, 179, 1033, 1496, 1505
NaeI	GCCGGC	1 cut(s)	274
NciI	CCSGG	2 cut(s)	1087, 1592
NdeII	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
NgoMIV	GCCGGC	1 cut(s)	272
NlaIII	CATG	3 cut(s)	688, 1232, 1481
NmeAIII	GCCGAG	2 cut(s)	232, 258
NmuCI	GTSAC	1 cut(s)	1148
NspI	RCATGY	1 cut(s)	1481
NspV	TTCGAA	1 cut(s)	523
PaqCI	CACCTGC	1 cut(s)	643
PciI	ACATGT	1 cut(s)	1477
PciSI	GCTCTTC	1 cut(s)	648
PctI	GAATGC	2 cut(s)	436, 1352
PdiI	GCCGGC	1 cut(s)	274
PdmI	GAANNNNTTC	2 cut(s)	475, 561
PfeI	GAWTC	8 cut(s)	443, 860, 959, 1225, 1259, 1310, 1583, 1707
PflMI	CCANNNNNTGG	1 cut(s)	1070
PleI	GAGTC	2 cut(s)	430, 1709
PmaCI	CACGTG	1 cut(s)	1451
PmlI	CACGTG	1 cut(s)	1451
PpsI	GAGTC	2 cut(s)	430, 1709
Ppu21I	YACGTR	1 cut(s)	1451
PscI	ACATGT	1 cut(s)	1477
PsiI	TTATAA	1 cut(s)	1214
Psp1406I	AACGTT	1 cut(s)	216
PspCI	CACGTG	1 cut(s)	1451
PspEI	GGTNACC	1 cut(s)	749
PspFI	CCCAGC	3 cut(s)	109, 971, 1337
PspPI	GGNCC	1 cut(s)	466
PstI	CTGCAG	1 cut(s)	1609
PsuI	RGATCY	2 cut(s)	821, 830
PvuII	CAGCTG	2 cut(s)	350, 1724
RsaI	GTAC	2 cut(s)	486, 1040
RsaNI	GTAC	2 cut(s)	485, 1039
RseI	CAYNNNNRTG	1 cut(s)	29
Rsr2I	CGGWCCG	1 cut(s)	466
RsrII	CGGWCCG	1 cut(s)	466
SalI	GTCGAC	1 cut(s)	588
SapI	GCTCTTC	1 cut(s)	648
SaqAI	TTAA	6 cut(s)	17, 606, 1128, 1163, 1236, 1683
Sau3AI	GATC	7 cut(s)	448, 511, 610, 821, 830, 1244, 1616
Sau96I	GGNCC	1 cut(s)	466
SchI	GAGTC	2 cut(s)	431, 1709
ScrFI	CCNGG	2 cut(s)	1087, 1592
SduI	GDGCHC	1 cut(s)	1741
SfaNI	GCATC	4 cut(s)	845, 1105, 1291, 1429
SfcI	CTRYAG	2 cut(s)	1509, 1605
SfuI	TTCGAA	1 cut(s)	523
SinI	GGWCC	1 cut(s)	466
SmiI	ATTTAAAT	1 cut(s)	1237
SmiMI	CAYNNNNRTG	1 cut(s)	29
SmlI	CTYRAG	1 cut(s)	255
SmoI	CTYRAG	1 cut(s)	255
SpeI	ACTAGT	1 cut(s)	1568
Sse9I	AATT	1 cut(s)	1422
SspI	AATATT	2 cut(s)	655, 1326
SspMI	CTAG	3 cut(s)	1542, 1569, 1742
StyD4I	CCNGG	2 cut(s)	1085, 1590
StyI	CCWWGG	2 cut(s)	183, 1374
SwaI	ATTTAAAT	1 cut(s)	1237
TaaI	ACNGT	3 cut(s)	377, 1297, 1385
TaiI	ACGT	3 cut(s)	200, 219, 1453
TaqI	TCGA	4 cut(s)	396, 523, 589, 1615
TaqII	GACCGA	2 cut(s)	454, 926
TasI	AATT	1 cut(s)	1422
TatI	WGTACW	1 cut(s)	1038
TfiI	GAWTC	8 cut(s)	443, 860, 959, 1225, 1259, 1310, 1583, 1707
Tru1I	TTAA	6 cut(s)	17, 606, 1128, 1163, 1236, 1683
Tru9I	TTAA	6 cut(s)	17, 606, 1128, 1163, 1236, 1683
TscAI	CASTG	3 cut(s)	1098, 1320, 1441
TseFI	GTSAC	1 cut(s)	1148
TseI	GCWGC	7 cut(s)	347, 434, 1052, 1442, 1445, 1604, 1724
Tsp45I	GTSAC	1 cut(s)	1148
TspDTI	ATGAA	7 cut(s)	93, 738, 810, 861, 909, 1221, 1596
TspGWI	ACGGA	2 cut(s)	1146, 1727
TspRI	CASTG	3 cut(s)	1098, 1320, 1441
Van91I	CCANNNNNTGG	1 cut(s)	1070
VpaK11BI	GGWCC	1 cut(s)	466
XapI	RAATTY	1 cut(s)	1422
XceI	RCATGY	1 cut(s)	1481
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1415, 1594
XmiI	GTMKAC	1 cut(s)	589
XmnI	GAANNNNTTC	2 cut(s)	475, 561
XspI	CTAG	3 cut(s)	1542, 1569, 1742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.