Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0005814

Physical Location & Seq

Genomic Coordinates Forward (+)

67731197 .. 67736938

Gene Structure 5742 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG440400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGCTTCATCGCTCTGCCACAACTATGTTCCTATCATCTTCCCCACCTAAACTCCTATCCCAACTCAGACACTCATACTCTGTTCTTTCCAACCCCTCATCCCCAGTTCGCATCAGCTTGATTTGGCTCAACCAGCCCCGCCGTTTCGCAACCGCCGCCGCTGCCGCCAAAGGAGGAGATACGTTTTTCGCTGAAGAAAATGTTTCGTGGACTTCACTTGGTTTATCCGATAAGGTTTCTCAAGCTCTCTTCAATGCAGGCCTCGGCCAACCCTCTCTTGTTCAGGCGGCTTGCATACCATCTATACTTTCAGGGAAGGATGTGATTGTTGCAGCTGAAACTGGTAGTGGTAAAACGCACAGTTTTCTTGTTCCTCTAATCAATAAGCTATGCAATGAGCAAGAAGAGTATGGGAATGCTGCTGATTCTGATCAAGGAGTGTCCCCGGTCCGTAAGATTTCTCTGGTGCTTTGTCCAAATGTAACACTTTGTGATCAAGTGGTTCGAATGGCCAATGGTCTTTGTGGCGAAAATGGTGAACCGCTTCTCAGAGCTACATCACTTTGTGGGCGACAGGGATGGCCAGTTAATGATCCTGATATTGTTGTTTCAACACCTGCGGCTCTGCTGAATAATATCGATCCAAACAAATACAAATCCCGTCGCATGGAATTTACACGGAGTGTAAAATATGTGGTGTTTGATGAAGCAGATATGCTTCTCAATGGTGGTTACCAAAATAAGGTTATTCGTCTCATAAACTTTTTCCGGTTTGACGAAAAGCTGTTGTCCCGCTCAAATGGATCTGCATCTGAGTTGCCAATGGACTTGGAATCTGAAACTTCATTGCATTTTAGTTCGGAAGATGAAGAAAATATAGAGACTGAAGCTGTCTCAGAAGATGACGAAAACTTTGAAGATGATGTTGATGATTTACCTAACGAGGCTGGGACTGGGAAGGTCAAATATAGAGACTGGAGAAGAGTGAGAAAAACTTATACACGCAGTAAACAGTACATTTTTGTTGCAGCCACTCTTCCAGCAAATGGGAAAAGAACTGCCGGGGCAGTGTTGAAAAAGATGTTTCCAGATGCAATTTGGGTTAATGGAAACTACCTCCATTGTCACAATCCCAGATTGAAGCAAAGGTGGATTGAAACGACATTCGATACTCAGGTGGATAAACTTATAAAGGCTGTGAATCATGGATTTAAATCCAGATCAGTGGAATTTGATTCTGGTCAATGCCGCACAATGGTATTTGCAAATACTGTTGATGCTGTGGAATCAGTGGCAAAAATATTGATGAGTGCTGGGATTGAATGCTACCTTTACCATAAAGACTGCTCTTTGGAAGACCGTGCAAAGACATTGGTTGATTTCCAAGAGAAAGGTGGAATTCTCGTTTGCACTGATGCTGCTGCACGTGGTATTGACATTCCAAATGTATCACATGTTATTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTATACACAGGGTTGGTCGCACAGCTAGAGCTGGTCAGTATGGACTTGTAACTAGTATGTATAATGAATCCAACCGGGATCTGGTTGCTGCGGTTCGTCGATCAGGGGAACTTGATATGCCTGTGGAGACGGCATTTAGCAGGAAAAGAAGCTTTCGAAATAAGATTAAGAAAAGAGCGGCTTTGCAAAGAATCACGGACTCATCAGCTGCTGAAAAGAGGGCTCTAGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

574

Amino Acids

63.47

Weight (kDa)

7.93

Isoelectric Point (pI)

46.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	94 - 257	7.5e-24	DEAD/DEAH box helicase
Helicase_C	PF00271	416 - 509	7.8e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59990 AT1G59990
fragaria_vesca	FvH4_4g35040 FvH4_4g35040 FvH4_4g35040 FvH4_4g35040
malus_domestica	MD00G1145400.v1.1 MD12G1027800.v1.1 MD13G1086600.v1.1 MD16G1086400.v1.1 MD16G1086500.v1.1
prunus_persica	Prupe.1G260000_v2.0.a1 Prupe.1G260000_v2.0.a1
pyrus_communis	pycom16g07460
rosa_chinensis	RchiOBHm_Chr4g0444581
rosa_laevigata	RLG00000005820
rosa_multiflora	Rmu_sc0003839.1_g000002 Rmu_sc0015511.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385030
rosa_rugosa	Rorug04G0354000 Rorug04G0354000 Rorug04G0354100 Rorug04G0354100
rosa_samantha	Rh4AG414000 Rh4BG425800 Rh4CG440400 Rh4DG421400
rosa_wichuraiana	Rw4G035570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1190
AarI	CACCTGC	1 cut(s)	625
Acc36I	ACCTGC	1 cut(s)	625
AccB7I	CCANNNNNTGG	1 cut(s)	1046
AccBSI	CCGCTC	2 cut(s)	795, 1670
AclWI	GGATC	4 cut(s)	587, 635, 811, 1578
AcoI	YGGCCR	3 cut(s)	265, 510, 581
AcsI	RAATTY	3 cut(s)	671, 1229, 1398
AcuI	CTGAAG	2 cut(s)	213, 906
AcvI	CACGTG	1 cut(s)	1427
AdeI	CACNNNGTG	3 cut(s)	491, 566, 683
AfaI	GTAC	1 cut(s)	1016
AfiI	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1573
AflIII	ACRYGT	1 cut(s)	1453
AgsI	TTSAA	7 cut(s)	253, 612, 917, 1075, 1141, 1157, 1322
AhlI	ACTAGT	1 cut(s)	1544
Alw26I	GTCTC	5 cut(s)	758, 875, 898, 966, 1613
AlwI	GGATC	4 cut(s)	587, 635, 811, 1578
AlwNI	CAGNNNCTG	1 cut(s)	1703
AoxI	GGCC	4 cut(s)	259, 265, 510, 581
ApeKI	GCWGC	8 cut(s)	161, 332, 419, 1028, 1418, 1421, 1580, 1700
ApoI	RAATTY	3 cut(s)	671, 1229, 1398
ArsI	GACNNNNNNTTYG	2 cut(s)	896, 928
Asp700I	GAANNNNTTC	1 cut(s)	543
AspS9I	GGNCC	1 cut(s)	448
AsuC2I	CCSGG	3 cut(s)	446, 1063, 1568
AsuHPI	GGTGA	1 cut(s)	548
AsuII	TTCGAA	2 cut(s)	505, 1648
AvaII	GGWCC	1 cut(s)	448
BaeI	ACNNNNGTAYC	2 cut(s)	1161, 1194
BalI	TGGCCA	2 cut(s)	512, 583
BanII	GRGCYC	1 cut(s)	1717
BbrPI	CACGTG	1 cut(s)	1427
BbsI	GAAGAC	1 cut(s)	1362
BbvI	GCAGC	8 cut(s)	148, 344, 406, 1040, 1405, 1408, 1567, 1687
BccI	CCATC	2 cut(s)	307, 573
BceAI	ACGGC	2 cut(s)	126, 1638
BclI	TGATCA	2 cut(s)	430, 493
BcnI	CCSGG	3 cut(s)	446, 1063, 1568
BcoDI	GTCTC	5 cut(s)	758, 875, 898, 966, 1613
BcuI	ACTAGT	1 cut(s)	1544
BfaI	CTAG	3 cut(s)	1518, 1545, 1718
BfmI	CTRYAG	1 cut(s)	1485
BfuAI	ACCTGC	1 cut(s)	625
Bme1390I	CCNGG	3 cut(s)	446, 1063, 1568
Bme18I	GGWCC	1 cut(s)	448
BmgT120I	GGNCC	1 cut(s)	448
BmrFI	CCNGG	3 cut(s)	446, 1063, 1568
BmrI	ACTGGG	2 cut(s)	98, 963
BmsI	GCATC	5 cut(s)	120, 818, 1081, 1267, 1405
BmuI	ACTGGG	2 cut(s)	98, 963
BpiI	GAAGAC	1 cut(s)	1362
BpmI	CTGGAG	1 cut(s)	997
Bpu14I	TTCGAA	2 cut(s)	505, 1648
BpuEI	CTTGAG	1 cut(s)	225
BpuMI	CCSGG	3 cut(s)	446, 1063, 1568
Bsa29I	ATCGAT	1 cut(s)	639
BsaAI	YACGTR	1 cut(s)	1427
BsaBI	GATNNNNATC	3 cut(s)	429, 808, 1213
BsaJI	CCNNGG	3 cut(s)	262, 444, 1062
BsaWI	WCCGGW	1 cut(s)	768
BsaXI	ACNNNNNCTCC	2 cut(s)	36, 66
Bsc4I	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1573
Bse1I	ACTGG	5 cut(s)	104, 346, 584, 958, 980
Bse3DI	GCAATG	2 cut(s)	400, 845
Bse8I	GATNNNNATC	3 cut(s)	429, 808, 1213
BseCI	ATCGAT	1 cut(s)	639
BseDI	CCNNGG	3 cut(s)	262, 444, 1062
BseGI	GGATG	3 cut(s)	98, 325, 584
BseJI	GATNNNNATC	3 cut(s)	429, 808, 1213
BseLI	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1573
BseMI	GCAATG	2 cut(s)	400, 845
BseMII	CTCAG	5 cut(s)	79, 562, 804, 909, 1187
BseNI	ACTGG	5 cut(s)	104, 346, 584, 958, 980
BseRI	GAGGAG	1 cut(s)	189
BseXI	GCAGC	8 cut(s)	148, 344, 406, 1040, 1405, 1408, 1567, 1687
BseYI	CCCAGC	2 cut(s)	947, 1313
BsgI	GTGCAG	1 cut(s)	1407
BshFI	GGCC	4 cut(s)	261, 267, 512, 583
BshVI	ATCGAT	1 cut(s)	639
BsiSI	CCGG	4 cut(s)	446, 769, 1062, 1567
BslFI	GGGAC	3 cut(s)	427, 775, 964
BslI	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1573
BsmAI	GTCTC	5 cut(s)	758, 875, 898, 966, 1613
BsmBI	CGTCTC	2 cut(s)	758, 1613
BsmFI	GGGAC	3 cut(s)	427, 775, 964
BsmI	GAATGC	2 cut(s)	421, 1328
BsnI	GGCC	4 cut(s)	261, 267, 512, 583
Bsp119I	TTCGAA	2 cut(s)	505, 1648
Bsp1286I	GDGCHC	1 cut(s)	1717
Bsp143I	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
BspANI	GGCC	4 cut(s)	261, 267, 512, 583
BspCNI	CTCAG	5 cut(s)	78, 561, 805, 908, 1186
BspDI	ATCGAT	1 cut(s)	639
BspMI	ACCTGC	1 cut(s)	625
BspPI	GGATC	4 cut(s)	587, 635, 811, 1578
BspT104I	TTCGAA	2 cut(s)	505, 1648
BsrBI	CCGCTC	2 cut(s)	795, 1670
BsrDI	GCAATG	2 cut(s)	400, 845
BsrI	ACTGG	5 cut(s)	104, 346, 584, 958, 980
BssECI	CCNNGG	3 cut(s)	262, 444, 1062
BssMI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
Bst4CI	ACNGT	4 cut(s)	362, 1014, 1273, 1361
Bst6I	CTCTTC	4 cut(s)	254, 399, 976, 1041
BstAPI	GCANNNNNTGC	1 cut(s)	1472
BstBAI	YACGTR	1 cut(s)	1427
BstBI	TTCGAA	2 cut(s)	505, 1648
BstC8I	GCNNGC	2 cut(s)	259, 292
BstDEI	CTNAG	5 cut(s)	65, 548, 813, 895, 1173
BstEII	GGTNACC	1 cut(s)	731
BstF5I	GGATG	3 cut(s)	98, 325, 584
BstKTI	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
BstMAI	GTCTC	5 cut(s)	758, 875, 898, 966, 1613
BstMBI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
BstMWI	GCNNNNNNNGC	6 cut(s)	133, 155, 161, 164, 1472, 1481
BstNSI	RCATGY	1 cut(s)	1457
BstPI	GGTNACC	1 cut(s)	731
BstSCI	CCNGG	3 cut(s)	444, 1061, 1566
BstSFI	CTRYAG	1 cut(s)	1485
BstV1I	GCAGC	8 cut(s)	148, 344, 406, 1040, 1405, 1408, 1567, 1687
BstV2I	GAAGAC	1 cut(s)	1362
BstX2I	RGATCY	2 cut(s)	803, 1570
BstXI	CCANNNNNNTGG	1 cut(s)	1225
BstYI	RGATCY	2 cut(s)	803, 1570
Bsu15I	ATCGAT	1 cut(s)	639
BsuRI	GGCC	4 cut(s)	261, 267, 512, 583
BsuTUI	ATCGAT	1 cut(s)	639
BtsCI	GGATG	3 cut(s)	98, 325, 584
BtsI	GCAGTG	1 cut(s)	1074
BtsIMutI	CAGTG	4 cut(s)	1074, 1230, 1296, 1410
BveI	ACCTGC	1 cut(s)	625
Cac8I	GCNNGC	2 cut(s)	259, 292
CaiI	CAGNNNCTG	1 cut(s)	1703
Cfr13I	GGNCC	1 cut(s)	448
ClaI	ATCGAT	1 cut(s)	639
CpoI	CGGWCCG	1 cut(s)	448
Csp6I	GTAC	1 cut(s)	1015
CspI	CGGWCCG	1 cut(s)	448
CviAII	CATG	3 cut(s)	667, 1205, 1454
CviQI	GTAC	1 cut(s)	1015
DdeI	CTNAG	5 cut(s)	65, 548, 813, 895, 1173
DpnI	GATC	8 cut(s)	432, 495, 594, 642, 805, 1222, 1572, 1594
DpnII	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
DraI	TTTAAA	1 cut(s)	1213
DraIII	CACNNNGTG	3 cut(s)	491, 566, 683
EaeI	YGGCCR	3 cut(s)	265, 510, 581
Eam1104I	CTCTTC	4 cut(s)	254, 399, 976, 1041
EarI	CTCTTC	4 cut(s)	254, 399, 976, 1041
Eco147I	AGGCCT	1 cut(s)	261
Eco24I	GRGCYC	1 cut(s)	1717
Eco47I	GGWCC	1 cut(s)	448
Eco57I	CTGAAG	2 cut(s)	213, 906
Eco72I	CACGTG	1 cut(s)	1427
Eco91I	GGTNACC	1 cut(s)	731
EcoO65I	GGTNACC	1 cut(s)	731
EcoRI	GAATTC	1 cut(s)	1398
EcoT38I	GRGCYC	1 cut(s)	1717
Esp3I	CGTCTC	2 cut(s)	758, 1613
FaeI	CATG	3 cut(s)	670, 1208, 1457
FalI	AAGNNNNNCTT	2 cut(s)	1657, 1689
FaqI	GGGAC	3 cut(s)	427, 775, 964
FatI	CATG	3 cut(s)	666, 1204, 1453
FauI	CCCGC	2 cut(s)	146, 800
FbaI	TGATCA	2 cut(s)	430, 493
FokI	GGATG	3 cut(s)	85, 332, 591
FriOI	GRGCYC	1 cut(s)	1717
FspBI	CTAG	3 cut(s)	1518, 1545, 1718
GsaI	CCCAGC	2 cut(s)	951, 1317
GsuI	CTGGAG	1 cut(s)	997
HaeIII	GGCC	4 cut(s)	261, 267, 512, 583
HapII	CCGG	4 cut(s)	446, 769, 1062, 1567
Hin1II	CATG	3 cut(s)	670, 1208, 1457
HindIII	AAGCTT	1 cut(s)	1642
HinfI	GANTC	8 cut(s)	425, 833, 1201, 1235, 1286, 1559, 1683, 1691
HpaII	CCGG	4 cut(s)	446, 769, 1062, 1567
HphI	GGTGA	1 cut(s)	548
Hpy166II	GTNNAC	3 cut(s)	210, 539, 1010
Hpy188I	TCNGA	8 cut(s)	68, 229, 430, 551, 814, 838, 862, 898
Hpy188III	TCNNGA	3 cut(s)	596, 1088, 1218
Hpy8I	GTNNAC	3 cut(s)	210, 539, 1010
Hpy99I	CGWCG	2 cut(s)	666, 1593
HpyAV	CCTTC	2 cut(s)	310, 952
HpyCH4III	ACNGT	4 cut(s)	362, 1014, 1273, 1361
HpyCH4IV	ACGT	2 cut(s)	182, 1426
HpyF10VI	GCNNNNNNNGC	6 cut(s)	133, 155, 161, 164, 1472, 1481
HpyF3I	CTNAG	5 cut(s)	65, 548, 813, 895, 1173
HpySE526I	ACGT	2 cut(s)	182, 1426
Hsp92II	CATG	3 cut(s)	670, 1208, 1457
Ksp22I	TGATCA	2 cut(s)	430, 493
Kzo9I	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
Lsp1109I	GCAGC	8 cut(s)	148, 344, 406, 1040, 1405, 1408, 1567, 1687
LweI	GCATC	5 cut(s)	120, 818, 1081, 1267, 1405
MaeI	CTAG	3 cut(s)	1518, 1545, 1718
MaeII	ACGT	2 cut(s)	182, 1426
MaeIII	GTNAC	4 cut(s)	481, 731, 1124, 1540
MalI	GATC	8 cut(s)	432, 495, 594, 642, 805, 1222, 1572, 1594
MbiI	CCGCTC	2 cut(s)	795, 1670
MboI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
MflI	RGATCY	2 cut(s)	803, 1570
MhlI	GDGCHC	1 cut(s)	1717
MlsI	TGGCCA	2 cut(s)	512, 583
MluCI	AATT	4 cut(s)	671, 1095, 1229, 1398
MluNI	TGGCCA	2 cut(s)	512, 583
MlyI	GAGTC	1 cut(s)	1685
MmeI	TCCRAC	2 cut(s)	114, 1587
MnlI	CCTC	8 cut(s)	106, 167, 272, 283, 384, 937, 1127, 1704
Mox20I	TGGCCA	2 cut(s)	512, 583
MroXI	GAANNNNTTC	1 cut(s)	543
MscI	TGGCCA	2 cut(s)	512, 583
MseI	TTAA	4 cut(s)	588, 1104, 1212, 1659
MslI	CAYNNNNRTG	1 cut(s)	23
Msp20I	TGGCCA	2 cut(s)	512, 583
MspA1I	CMGCKG	3 cut(s)	161, 335, 1700
MspI	CCGG	4 cut(s)	446, 769, 1062, 1567
MspR9I	CCNGG	3 cut(s)	446, 1063, 1568
Mva1269I	GAATGC	2 cut(s)	421, 1328
MwoI	GCNNNNNNNGC	6 cut(s)	133, 155, 161, 164, 1472, 1481
NciI	CCSGG	3 cut(s)	446, 1063, 1568
NdeII	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
NlaIII	CATG	3 cut(s)	670, 1208, 1457
NmeAIII	GCCGAG	1 cut(s)	243
NmuCI	GTSAC	1 cut(s)	1124
NspI	RCATGY	1 cut(s)	1457
NspV	TTCGAA	2 cut(s)	505, 1648
PaqCI	CACCTGC	1 cut(s)	625
PceI	AGGCCT	1 cut(s)	261
PciI	ACATGT	1 cut(s)	1453
PctI	GAATGC	2 cut(s)	421, 1328
PdmI	GAANNNNTTC	1 cut(s)	543
PfeI	GAWTC	7 cut(s)	425, 833, 1201, 1235, 1286, 1559, 1683
PflMI	CCANNNNNTGG	1 cut(s)	1046
PleI	GAGTC	1 cut(s)	1685
PmaCI	CACGTG	1 cut(s)	1427
PmlI	CACGTG	1 cut(s)	1427
PpsI	GAGTC	1 cut(s)	1685
Ppu21I	YACGTR	1 cut(s)	1427
PscI	ACATGT	1 cut(s)	1453
PsiI	TTATAA	1 cut(s)	1190
PspCI	CACGTG	1 cut(s)	1427
PspEI	GGTNACC	1 cut(s)	731
PspFI	CCCAGC	2 cut(s)	947, 1313
PspPI	GGNCC	1 cut(s)	448
PstNI	CAGNNNCTG	1 cut(s)	1703
PsuI	RGATCY	2 cut(s)	803, 1570
PvuII	CAGCTG	2 cut(s)	335, 1700
RsaI	GTAC	1 cut(s)	1016
RsaNI	GTAC	1 cut(s)	1015
RseI	CAYNNNNRTG	1 cut(s)	23
Rsr2I	CGGWCCG	1 cut(s)	448
RsrII	CGGWCCG	1 cut(s)	448
SaqAI	TTAA	4 cut(s)	588, 1104, 1212, 1659
Sau3AI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1570, 1592
Sau96I	GGNCC	1 cut(s)	448
SchI	GAGTC	1 cut(s)	1685
ScrFI	CCNGG	3 cut(s)	446, 1063, 1568
SduI	GDGCHC	1 cut(s)	1717
SfaNI	GCATC	5 cut(s)	120, 818, 1081, 1267, 1405
SfcI	CTRYAG	1 cut(s)	1485
SfuI	TTCGAA	2 cut(s)	505, 1648
SinI	GGWCC	1 cut(s)	448
SmiI	ATTTAAAT	1 cut(s)	1213
SmiMI	CAYNNNNRTG	1 cut(s)	23
SmlI	CTYRAG	1 cut(s)	240
SmoI	CTYRAG	1 cut(s)	240
SpeI	ACTAGT	1 cut(s)	1544
Sse9I	AATT	4 cut(s)	671, 1095, 1229, 1398
SseBI	AGGCCT	1 cut(s)	261
SspI	AATATT	1 cut(s)	1302
SspMI	CTAG	3 cut(s)	1518, 1545, 1718
StuI	AGGCCT	1 cut(s)	261
StyD4I	CCNGG	3 cut(s)	444, 1061, 1566
SwaI	ATTTAAAT	1 cut(s)	1213
TaaI	ACNGT	4 cut(s)	362, 1014, 1273, 1361
TaiI	ACGT	2 cut(s)	185, 1429
TaqI	TCGA	5 cut(s)	505, 639, 1167, 1591, 1648
TasI	AATT	4 cut(s)	671, 1095, 1229, 1398
TatI	WGTACW	1 cut(s)	1014
TauI	GCSGC	7 cut(s)	158, 161, 167, 290, 623, 1251, 1673
TfiI	GAWTC	7 cut(s)	425, 833, 1201, 1235, 1286, 1559, 1683
Tru1I	TTAA	4 cut(s)	588, 1104, 1212, 1659
Tru9I	TTAA	4 cut(s)	588, 1104, 1212, 1659
TscAI	CASTG	4 cut(s)	1074, 1230, 1296, 1417
TseFI	GTSAC	1 cut(s)	1124
TseI	GCWGC	8 cut(s)	161, 332, 419, 1028, 1418, 1421, 1580, 1700
Tsp45I	GTSAC	1 cut(s)	1124
TspDTI	ATGAA	4 cut(s)	720, 834, 882, 1572
TspGWI	ACGGA	3 cut(s)	440, 694, 1703
TspRI	CASTG	4 cut(s)	1074, 1230, 1296, 1417
Van91I	CCANNNNNTGG	1 cut(s)	1046
VpaK11BI	GGWCC	1 cut(s)	448
XapI	RAATTY	3 cut(s)	671, 1229, 1398
XceI	RCATGY	1 cut(s)	1457
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1095, 1391, 1570
XmnI	GAANNNNTTC	1 cut(s)	543
XspI	CTAG	3 cut(s)	1518, 1545, 1718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.