Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0005814

Physical Location & Seq

Genomic Coordinates Reverse (-)

2119012 .. 2122204

Gene Structure 3193 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005820

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCTTCATCGCTCTGCCACAACTATGTTCCTATCATCTTCCCCACCTAAACTCCTATCCCAACTCAGACACTCATACTCTGTTCTTTCCAACCCTTCATCCCCAGCTCGTATCAGCTTGATTTGGCTCAACCAGCCCCGCCGTTTCGCAACCGCCGCCGCCGCCAAGGGAGGAGATACGTTTTTCGCTGAAGGAAATGTTTCGTGGACTTCACTTGGTTTATCCGATAAGGTTTCTCAAGCTCTCTTCAATGCCGGCCTCGGCCAACCCTCTCTTGTTCAGGCGGCTTGCATACCATCTATACTTTCAGGGAAGGATGTGATTGTTGCAGCTGAAACTGGTAGTGGTAAAACGCACAGTTTTCTTGTTCCTCTAATCAATAAGCTATGCAATGAGCAAGAAGAGTCTGGGAATGCTGTTGATTCTGATCAAGGAGTGTCCCCGGGCCGTAAGATTTCTCTGGTGCTTTGTCCAAATGTAACACTTTGTGATCAAGTGGTTCGAATGGCCAATGGTCTTTGTGGCGAAAATGGTGAACCGCTTCTCAGAGCTACATCACTTTGTGGGCGACAGGGATGGCCAGTTAATGATCCTGATATTGTTGTTTCAACACCTGCGGCTCTGCTGAATAATATTGATCCAAACAAATACAAATTCCGTCGTATGGAATTTACACGGAGTGTAAAATATGTGGTGTTTGATGAAGCAGATATGCTTCTCAATGGTGGTTACCAAAATAAGGTTATTCGTCTCATAAACTTTCTCCTGTTTGACGAAAAACTGTTGTCCCGCTCAAATGGATCTGCATCTGAGTTGCCAATGGACTTGGAATCTGAAACTTCATTGCATTTTGGTTTGGAAGATGACGAAAATATAGAGACCGAAGCTGTCTCAGAGGATGAGGAAAACTATGAAGATGATGTTGATGATTTACCTGACGAGGCTGGGACTGGGAAGGTCAAATATAGAGACTGGAGAAGAGTGAGAAAAACTTATACGCGCAGTAAACAGTACATTTTTGTTGCAGCCACTCTTCCAGCAAATGGGAAAAGAACTGCCGGGGCAGTGTTGAAAAAGATGTTTCCAGATGCGATTTGGGTTAATGGAAACTACCTCCATTATCACAATCCCAGATTGAAGCAAAGGTGGATTGAAACGACATTTGATACTCAGGTGGATGAACTTATAAAGGCTGTGAATCATGGATTTAAATCCAGATTGGATTCTGGTCAATGCCGCACAATGGTTTTTGCAAATACTGTTGATGCTGTGGAATCAGTGGCAAAAATATTGATGAGTGCTGGGATTGAATGCTACCTTTACCATAAAGACTGCTCCTTGGAAGACCGTGCAAAGACATTGGTTGATTTCCAGGAGAAAGGTGGAATTCTTGTTTGCACTGATGCTGCTGCACGTGGTATTGACATTCCAAATGTATCACATGTTATTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTATACACAGGGTTGGTCGCACAGCTAGAGCTGGTCAGCATGGACTTGTAACTAGTATGTATAATGAATCCAACCGGGATCTGGTTGCTGCAGTTCGTCGATCAGGGGAACTTGATATGCCTGTGGAGACGGCATTTAGCAGGAAAAGAAGCTTTCGAAATAAGATTAAGAAAAGAGTAGTGGCTTTGCAAAGAATCACGGACTCATCAGCTGCTGAAAAGAGGGCTCTAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

572

Amino Acids

63.02

Weight (kDa)

7.15

Isoelectric Point (pI)

45.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	93 - 255	9.2e-24	DEAD/DEAH box helicase
Helicase_C	PF00271	411 - 505	5.9e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59990 AT1G59990
fragaria_vesca	FvH4_4g35040 FvH4_4g35040 FvH4_4g35040 FvH4_4g35040
malus_domestica	MD00G1145400.v1.1 MD12G1027800.v1.1 MD13G1086600.v1.1 MD16G1086400.v1.1 MD16G1086500.v1.1
prunus_persica	Prupe.1G260000_v2.0.a1 Prupe.1G260000_v2.0.a1
pyrus_communis	pycom16g07460
rosa_chinensis	RchiOBHm_Chr4g0444581
rosa_laevigata	RLG00000005820
rosa_multiflora	Rmu_sc0003839.1_g000002 Rmu_sc0015511.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385030
rosa_rugosa	Rorug04G0354000 Rorug04G0354000 Rorug04G0354100 Rorug04G0354100
rosa_samantha	Rh4AG414000 Rh4BG425800 Rh4CG440400 Rh4DG421400
rosa_wichuraiana	Rw4G035570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1187
AarI	CACCTGC	1 cut(s)	622
Acc36I	ACCTGC	1 cut(s)	622
AccB7I	CCANNNNNTGG	1 cut(s)	1043
AccBSI	CCGCTC	1 cut(s)	792
AccII	CGCG	1 cut(s)	1000
AclWI	GGATC	4 cut(s)	584, 632, 808, 1566
AcoI	YGGCCR	3 cut(s)	262, 507, 578
AcsI	RAATTY	3 cut(s)	653, 668, 1386
AcuI	CTGAAG	1 cut(s)	210
AcvI	CACGTG	1 cut(s)	1415
AdeI	CACNNNGTG	3 cut(s)	488, 563, 680
AfaI	GTAC	1 cut(s)	1013
AfiI	CCNNNNNNNGG	5 cut(s)	664, 739, 1043, 1243, 1561
AflIII	ACRYGT	1 cut(s)	1441
AgsI	TTSAA	6 cut(s)	250, 609, 1072, 1138, 1154, 1310
AhlI	ACTAGT	1 cut(s)	1532
AjnI	CCWGG	1 cut(s)	1371
Alw26I	GTCTC	5 cut(s)	755, 872, 895, 963, 1601
AlwI	GGATC	4 cut(s)	584, 632, 808, 1566
AlwNI	CAGNNNCTG	1 cut(s)	1694
Ama87I	CYCGRG	1 cut(s)	442
AoxI	GGCC	5 cut(s)	256, 262, 445, 507, 578
ApeKI	GCWGC	6 cut(s)	329, 1025, 1406, 1409, 1568, 1691
ApoI	RAATTY	3 cut(s)	653, 668, 1386
Asp700I	GAANNNNTTC	2 cut(s)	199, 540
AspLEI	GCGC	1 cut(s)	1002
AspS9I	GGNCC	1 cut(s)	445
AsuC2I	CCSGG	4 cut(s)	443, 444, 1060, 1556
AsuHPI	GGTGA	1 cut(s)	545
AsuII	TTCGAA	2 cut(s)	502, 1636
AvaI	CYCGRG	1 cut(s)	442
BaeI	ACNNNNGTAYC	2 cut(s)	1158, 1191
BalI	TGGCCA	2 cut(s)	509, 580
BanII	GRGCYC	1 cut(s)	1708
BbrPI	CACGTG	1 cut(s)	1415
BbsI	GAAGAC	1 cut(s)	1350
BbvI	GCAGC	6 cut(s)	341, 1037, 1393, 1396, 1555, 1678
BccI	CCATC	2 cut(s)	304, 570
BceAI	ACGGC	3 cut(s)	126, 432, 1626
BciT130I	CCWGG	1 cut(s)	1373
BclI	TGATCA	2 cut(s)	427, 490
BcnI	CCSGG	4 cut(s)	443, 444, 1060, 1556
BcoDI	GTCTC	5 cut(s)	755, 872, 895, 963, 1601
BcuI	ACTAGT	1 cut(s)	1532
BfaI	CTAG	3 cut(s)	1506, 1533, 1709
BfmI	CTRYAG	2 cut(s)	1473, 1569
BfuAI	ACCTGC	1 cut(s)	622
Bme1390I	CCNGG	5 cut(s)	443, 444, 1060, 1373, 1556
BmeT110I	CYCGRG	1 cut(s)	442
BmgT120I	GGNCC	1 cut(s)	445
BmrFI	CCNGG	5 cut(s)	443, 444, 1060, 1373, 1556
BmrI	ACTGGG	1 cut(s)	960
BmsI	GCATC	4 cut(s)	815, 1078, 1255, 1393
BmuI	ACTGGG	1 cut(s)	960
BpiI	GAAGAC	1 cut(s)	1350
BpmI	CTGGAG	1 cut(s)	994
Bpu14I	TTCGAA	2 cut(s)	502, 1636
BpuEI	CTTGAG	1 cut(s)	222
BpuMI	CCSGG	4 cut(s)	443, 444, 1060, 1556
BsaAI	YACGTR	1 cut(s)	1415
BsaBI	GATNNNNATC	3 cut(s)	426, 805, 1210
BsaI	GGTCTC	1 cut(s)	872
BsaJI	CCNNGG	6 cut(s)	165, 259, 441, 442, 1059, 1338
BsaXI	ACNNNNNCTCC	2 cut(s)	36, 66
Bsc4I	CCNNNNNNNGG	5 cut(s)	664, 739, 1043, 1243, 1561
Bse118I	RCCGGY	1 cut(s)	254
Bse1I	ACTGG	4 cut(s)	343, 581, 955, 977
Bse3DI	GCAATG	2 cut(s)	397, 842
Bse8I	GATNNNNATC	3 cut(s)	426, 805, 1210
BseBI	CCWGG	1 cut(s)	1373
BseDI	CCNNGG	6 cut(s)	165, 259, 441, 442, 1059, 1338
BseGI	GGATG	5 cut(s)	98, 322, 581, 904, 1183
BseJI	GATNNNNATC	3 cut(s)	426, 805, 1210
BseLI	CCNNNNNNNGG	5 cut(s)	664, 739, 1043, 1243, 1561
BseMI	GCAATG	2 cut(s)	397, 842
BseMII	CTCAG	5 cut(s)	79, 559, 801, 906, 1184
BseNI	ACTGG	4 cut(s)	343, 581, 955, 977
BseRI	GAGGAG	1 cut(s)	186
BseXI	GCAGC	6 cut(s)	341, 1037, 1393, 1396, 1555, 1678
BseYI	CCCAGC	3 cut(s)	103, 944, 1301
BsgI	GTGCAG	1 cut(s)	1395
Bsh1236I	CGCG	1 cut(s)	1000
BshFI	GGCC	5 cut(s)	258, 264, 447, 509, 580
BsiHKCI	CYCGRG	1 cut(s)	442
BsiSI	CCGG	4 cut(s)	255, 443, 1059, 1555
BslFI	GGGAC	3 cut(s)	424, 772, 961
BslI	CCNNNNNNNGG	5 cut(s)	664, 739, 1043, 1243, 1561
BsmAI	GTCTC	5 cut(s)	755, 872, 895, 963, 1601
BsmBI	CGTCTC	2 cut(s)	755, 1601
BsmFI	GGGAC	3 cut(s)	424, 772, 961
BsmI	GAATGC	2 cut(s)	418, 1316
BsnI	GGCC	5 cut(s)	258, 264, 447, 509, 580
Bso31I	GGTCTC	1 cut(s)	872
BsoBI	CYCGRG	1 cut(s)	442
Bsp119I	TTCGAA	2 cut(s)	502, 1636
Bsp1286I	GDGCHC	1 cut(s)	1708
Bsp143I	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
BspANI	GGCC	5 cut(s)	258, 264, 447, 509, 580
BspCNI	CTCAG	5 cut(s)	78, 558, 802, 905, 1183
BspFNI	CGCG	1 cut(s)	1000
BspMAI	CTGCAG	1 cut(s)	1573
BspMI	ACCTGC	1 cut(s)	622
BspPI	GGATC	4 cut(s)	584, 632, 808, 1566
BspT104I	TTCGAA	2 cut(s)	502, 1636
BspTNI	GGTCTC	1 cut(s)	872
BsrBI	CCGCTC	1 cut(s)	792
BsrDI	GCAATG	2 cut(s)	397, 842
BsrFI	RCCGGY	1 cut(s)	254
BsrI	ACTGG	4 cut(s)	343, 581, 955, 977
BssAI	RCCGGY	1 cut(s)	254
BssECI	CCNNGG	6 cut(s)	165, 259, 441, 442, 1059, 1338
BssMI	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
BssT1I	CCWWGG	2 cut(s)	165, 1338
Bst2UI	CCWGG	1 cut(s)	1373
Bst4CI	ACNGT	5 cut(s)	359, 783, 1011, 1261, 1349
Bst6I	CTCTTC	4 cut(s)	251, 396, 973, 1038
BstAPI	GCANNNNNTGC	1 cut(s)	1460
BstBAI	YACGTR	1 cut(s)	1415
BstBI	TTCGAA	2 cut(s)	502, 1636
BstC8I	GCNNGC	2 cut(s)	256, 289
BstDEI	CTNAG	5 cut(s)	65, 545, 810, 892, 1170
BstEII	GGTNACC	1 cut(s)	728
BstF5I	GGATG	5 cut(s)	98, 322, 581, 904, 1183
BstFNI	CGCG	1 cut(s)	1000
BstHHI	GCGC	1 cut(s)	1002
BstKTI	GATC	7 cut(s)	430, 493, 592, 640, 803, 1561, 1583
BstMAI	GTCTC	5 cut(s)	755, 872, 895, 963, 1601
BstMBI	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
BstMWI	GCNNNNNNNGC	5 cut(s)	133, 155, 161, 1460, 1469
BstNI	CCWGG	1 cut(s)	1373
BstNSI	RCATGY	1 cut(s)	1445
BstPI	GGTNACC	1 cut(s)	728
BstSCI	CCNGG	5 cut(s)	441, 442, 1058, 1371, 1554
BstSFI	CTRYAG	2 cut(s)	1473, 1569
BstUI	CGCG	1 cut(s)	1000
BstV1I	GCAGC	6 cut(s)	341, 1037, 1393, 1396, 1555, 1678
BstV2I	GAAGAC	1 cut(s)	1350
BstX2I	RGATCY	2 cut(s)	800, 1558
BstYI	RGATCY	2 cut(s)	800, 1558
BsuRI	GGCC	5 cut(s)	258, 264, 447, 509, 580
BtsCI	GGATG	5 cut(s)	98, 322, 581, 904, 1183
BtsI	GCAGTG	1 cut(s)	1071
BtsIMutI	CAGTG	3 cut(s)	1071, 1284, 1398
BveI	ACCTGC	1 cut(s)	622
Cac8I	GCNNGC	2 cut(s)	256, 289
CaiI	CAGNNNCTG	1 cut(s)	1694
CfoI	GCGC	1 cut(s)	1002
Cfr10I	RCCGGY	1 cut(s)	254
Cfr13I	GGNCC	1 cut(s)	445
Cfr9I	CCCGGG	1 cut(s)	442
Csp6I	GTAC	1 cut(s)	1012
CviAII	CATG	3 cut(s)	1202, 1442, 1520
CviQI	GTAC	1 cut(s)	1012
DdeI	CTNAG	5 cut(s)	65, 545, 810, 892, 1170
DpnI	GATC	7 cut(s)	429, 492, 591, 639, 802, 1560, 1582
DpnII	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
DraI	TTTAAA	1 cut(s)	1210
DraIII	CACNNNGTG	3 cut(s)	488, 563, 680
EaeI	YGGCCR	3 cut(s)	262, 507, 578
Eam1104I	CTCTTC	4 cut(s)	251, 396, 973, 1038
EarI	CTCTTC	4 cut(s)	251, 396, 973, 1038
Eco130I	CCWWGG	2 cut(s)	165, 1338
Eco24I	GRGCYC	1 cut(s)	1708
Eco31I	GGTCTC	1 cut(s)	872
Eco57I	CTGAAG	1 cut(s)	210
Eco72I	CACGTG	1 cut(s)	1415
Eco88I	CYCGRG	1 cut(s)	442
Eco91I	GGTNACC	1 cut(s)	728
EcoO65I	GGTNACC	1 cut(s)	728
EcoRI	GAATTC	1 cut(s)	1386
EcoRII	CCWGG	1 cut(s)	1371
EcoT14I	CCWWGG	2 cut(s)	165, 1338
EcoT38I	GRGCYC	1 cut(s)	1708
ErhI	CCWWGG	2 cut(s)	165, 1338
Esp3I	CGTCTC	2 cut(s)	755, 1601
FaeI	CATG	3 cut(s)	1205, 1445, 1523
FaqI	GGGAC	3 cut(s)	424, 772, 961
FatI	CATG	3 cut(s)	1201, 1441, 1519
FauI	CCCGC	2 cut(s)	146, 797
FbaI	TGATCA	2 cut(s)	427, 490
FokI	GGATG	5 cut(s)	85, 329, 588, 911, 1190
FriOI	GRGCYC	1 cut(s)	1708
FspBI	CTAG	3 cut(s)	1506, 1533, 1709
GlaI	GCGC	1 cut(s)	1001
GsaI	CCCAGC	3 cut(s)	107, 948, 1305
GsuI	CTGGAG	1 cut(s)	994
HaeIII	GGCC	5 cut(s)	258, 264, 447, 509, 580
HapII	CCGG	4 cut(s)	255, 443, 1059, 1555
HhaI	GCGC	1 cut(s)	1002
Hin1II	CATG	3 cut(s)	1205, 1445, 1523
Hin6I	GCGC	1 cut(s)	1000
HinP1I	GCGC	1 cut(s)	1000
HindIII	AAGCTT	1 cut(s)	1630
HinfI	GANTC	9 cut(s)	404, 422, 830, 1198, 1223, 1274, 1547, 1674, 1682
HpaII	CCGG	4 cut(s)	255, 443, 1059, 1555
HphI	GGTGA	1 cut(s)	545
Hpy166II	GTNNAC	3 cut(s)	207, 536, 1007
Hpy188I	TCNGA	7 cut(s)	68, 226, 427, 548, 811, 835, 895
Hpy188III	TCNNGA	3 cut(s)	593, 1085, 1215
Hpy8I	GTNNAC	3 cut(s)	207, 536, 1007
Hpy99I	CGWCG	2 cut(s)	663, 1581
HpyAV	CCTTC	4 cut(s)	105, 185, 307, 949
HpyCH4III	ACNGT	5 cut(s)	359, 783, 1011, 1261, 1349
HpyCH4IV	ACGT	2 cut(s)	179, 1414
HpyF10VI	GCNNNNNNNGC	5 cut(s)	133, 155, 161, 1460, 1469
HpyF3I	CTNAG	5 cut(s)	65, 545, 810, 892, 1170
HpySE526I	ACGT	2 cut(s)	179, 1414
Hsp92II	CATG	3 cut(s)	1205, 1445, 1523
HspAI	GCGC	1 cut(s)	1000
KroI	GCCGGC	1 cut(s)	254
KroNI	GCCGGC	1 cut(s)	256
Ksp22I	TGATCA	2 cut(s)	427, 490
Kzo9I	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
LmnI	GCTCC	1 cut(s)	1340
Lsp1109I	GCAGC	6 cut(s)	341, 1037, 1393, 1396, 1555, 1678
LweI	GCATC	4 cut(s)	815, 1078, 1255, 1393
MaeI	CTAG	3 cut(s)	1506, 1533, 1709
MaeII	ACGT	2 cut(s)	179, 1414
MaeIII	GTNAC	3 cut(s)	478, 728, 1528
MalI	GATC	7 cut(s)	429, 492, 591, 639, 802, 1560, 1582
MbiI	CCGCTC	1 cut(s)	792
MboI	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
MboII	GAAGA	8 cut(s)	30, 238, 413, 872, 926, 990, 1025, 1355
MflI	RGATCY	2 cut(s)	800, 1558
MhlI	GDGCHC	1 cut(s)	1708
MlsI	TGGCCA	2 cut(s)	509, 580
MluCI	AATT	3 cut(s)	653, 668, 1386
MluNI	TGGCCA	2 cut(s)	509, 580
MlyI	GAGTC	2 cut(s)	413, 1676
MmeI	TCCRAC	2 cut(s)	114, 1575
MnlI	CCTC	9 cut(s)	164, 269, 280, 381, 889, 895, 934, 1124, 1695
Mox20I	TGGCCA	2 cut(s)	509, 580
MroNI	GCCGGC	1 cut(s)	254
MroXI	GAANNNNTTC	2 cut(s)	199, 540
MscI	TGGCCA	2 cut(s)	509, 580
MseI	TTAA	4 cut(s)	585, 1101, 1209, 1647
MslI	CAYNNNNRTG	1 cut(s)	23
Msp20I	TGGCCA	2 cut(s)	509, 580
MspA1I	CMGCKG	2 cut(s)	332, 1691
MspI	CCGG	4 cut(s)	255, 443, 1059, 1555
MspR9I	CCNGG	5 cut(s)	443, 444, 1060, 1373, 1556
Mva1269I	GAATGC	2 cut(s)	418, 1316
MvaI	CCWGG	1 cut(s)	1373
MvnI	CGCG	1 cut(s)	1000
MwoI	GCNNNNNNNGC	5 cut(s)	133, 155, 161, 1460, 1469
NaeI	GCCGGC	1 cut(s)	256
NciI	CCSGG	4 cut(s)	443, 444, 1060, 1556
NdeII	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
NgoMIV	GCCGGC	1 cut(s)	254
NlaIII	CATG	3 cut(s)	1205, 1445, 1523
NmeAIII	GCCGAG	1 cut(s)	240
NspI	RCATGY	1 cut(s)	1445
NspV	TTCGAA	2 cut(s)	502, 1636
PaqCI	CACCTGC	1 cut(s)	622
PciI	ACATGT	1 cut(s)	1441
PctI	GAATGC	2 cut(s)	418, 1316
PdiI	GCCGGC	1 cut(s)	256
PdmI	GAANNNNTTC	2 cut(s)	199, 540
PfeI	GAWTC	7 cut(s)	422, 830, 1198, 1223, 1274, 1547, 1674
PflMI	CCANNNNNTGG	1 cut(s)	1043
PfoI	TCCNGGA	1 cut(s)	1371
PleI	GAGTC	2 cut(s)	412, 1676
PmaCI	CACGTG	1 cut(s)	1415
PmlI	CACGTG	1 cut(s)	1415
PpsI	GAGTC	2 cut(s)	412, 1676
Ppu21I	YACGTR	1 cut(s)	1415
PscI	ACATGT	1 cut(s)	1441
PsiI	TTATAA	1 cut(s)	1187
Psp6I	CCWGG	1 cut(s)	1371
PspCI	CACGTG	1 cut(s)	1415
PspEI	GGTNACC	1 cut(s)	728
PspFI	CCCAGC	3 cut(s)	103, 944, 1301
PspGI	CCWGG	1 cut(s)	1371
PspPI	GGNCC	1 cut(s)	445
PstI	CTGCAG	1 cut(s)	1573
PstNI	CAGNNNCTG	1 cut(s)	1694
PsuI	RGATCY	2 cut(s)	800, 1558
PvuII	CAGCTG	2 cut(s)	332, 1691
RsaI	GTAC	1 cut(s)	1013
RsaNI	GTAC	1 cut(s)	1012
RseI	CAYNNNNRTG	1 cut(s)	23
SaqAI	TTAA	4 cut(s)	585, 1101, 1209, 1647
Sau3AI	GATC	7 cut(s)	427, 490, 589, 637, 800, 1558, 1580
Sau96I	GGNCC	1 cut(s)	445
SchI	GAGTC	2 cut(s)	413, 1676
ScrFI	CCNGG	5 cut(s)	443, 444, 1060, 1373, 1556
SduI	GDGCHC	1 cut(s)	1708
SfaNI	GCATC	4 cut(s)	815, 1078, 1255, 1393
SfcI	CTRYAG	2 cut(s)	1473, 1569
SfuI	TTCGAA	2 cut(s)	502, 1636
SmaI	CCCGGG	1 cut(s)	444
SmiI	ATTTAAAT	1 cut(s)	1210
SmiMI	CAYNNNNRTG	1 cut(s)	23
SmlI	CTYRAG	1 cut(s)	237
SmoI	CTYRAG	1 cut(s)	237
SpeI	ACTAGT	1 cut(s)	1532
Sse9I	AATT	3 cut(s)	653, 668, 1386
SspI	AATATT	2 cut(s)	634, 1290
SspMI	CTAG	3 cut(s)	1506, 1533, 1709
StyD4I	CCNGG	5 cut(s)	441, 442, 1058, 1371, 1554
StyI	CCWWGG	2 cut(s)	165, 1338
SwaI	ATTTAAAT	1 cut(s)	1210
TaaI	ACNGT	5 cut(s)	359, 783, 1011, 1261, 1349
TaiI	ACGT	2 cut(s)	182, 1417
TaqI	TCGA	3 cut(s)	502, 1579, 1636
TaqII	GACCGA	1 cut(s)	896
TasI	AATT	3 cut(s)	653, 668, 1386
TatI	WGTACW	1 cut(s)	1011
TauI	GCSGC	6 cut(s)	158, 161, 164, 287, 620, 1239
TfiI	GAWTC	7 cut(s)	422, 830, 1198, 1223, 1274, 1547, 1674
Tru1I	TTAA	4 cut(s)	585, 1101, 1209, 1647
Tru9I	TTAA	4 cut(s)	585, 1101, 1209, 1647
TscAI	CASTG	3 cut(s)	1071, 1284, 1405
TseI	GCWGC	6 cut(s)	329, 1025, 1406, 1409, 1568, 1691
TspDTI	ATGAA	6 cut(s)	87, 717, 831, 927, 1194, 1560
TspGWI	ACGGA	3 cut(s)	647, 691, 1694
TspMI	CCCGGG	1 cut(s)	442
TspRI	CASTG	3 cut(s)	1071, 1284, 1405
Van91I	CCANNNNNTGG	1 cut(s)	1043
XapI	RAATTY	3 cut(s)	653, 668, 1386
XceI	RCATGY	1 cut(s)	1445
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1092, 1379, 1558
XmaI	CCCGGG	1 cut(s)	442
XmnI	GAANNNNTTC	2 cut(s)	199, 540
XspI	CTAG	3 cut(s)	1506, 1533, 1709

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.