Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0005814

Physical Location & Seq

Genomic Coordinates Forward (+)

56966888 .. 56970530

Gene Structure 3643 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG425800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGATGCTTCATCGCTCTGCCACAACTATGTTCCTATCATCTTCCCCACCTAAACTCCTATCCCAACTCAGACACTCATACTCTGTTCTTTCCAACCCCTCATCCCCAGTTCGCATCAGCTTGATTTGGCTCAACCAGCCCCGCCGTTTCGCAACCGCCGCCGCTGCCGCCAAAGGAGGAGATACGTTTTTCGCTGAAGAAAATGTTTCGTGGACTTCACTTGGTTTATCCGATAAGGTTTCTCAAGCTCTCTTCAATGCAGGCCTCGGCCAACCCTCTCTTGTTCAGGCGGCTTGCATACCATCTATACTTTCAGGGAAGGATGTGATTGTTGCAGCTGAAACTGGTAGTGGTAAAACGCACAGTTTTCTTGTTCCTCTAATCAATAAGCTATGCAATGAGCAAGAAGAGTATGGGAATGCTGCTGATTCTGATCAAGGAGTGTCCCCAGTCCGTAAGATTTCTCTGGTGCTTTGTCCAAATGTAACACTTTGTGATCAAGTGGTTCGAATGGCCAATGGTCTTTGTGGCGAAAATGGTGAACCGCTTCTCAGAGCTACATCACTTTGTGGGCGACAGGGATGGCCAGTTAATGATCCTGATATTGTTGTTTCAACACCTGCGGCTCTGCTGAATAATATCGATCCAAACAAATACAAATCCCGTCGCATGGAATTTACACGGAGTGTAAAATATGTGGTGTTTGATGAAGCAGATATGCTTCTCAATGGTGGTTACCAAAATAAGGTTATTCGTCTCATAAACTTTCTCCGGTTTGACGAAAAGTTGTTGTCCCACTCAAATGGATCTGCATCTGAGTTGCCAATGGACTTGGAATCTGAAACTTCATTGCATTTTAGTTCGGAAGATGAAGAAAATATAGAGACTGAAGCTGTCTCAGAAGATGAGGAAAACTTTGAAGATGATGTTGATGATTTACCTGACGAGGCTGGGACTGGGAAGGTCAAATATAGAGACTGGAGAAGAGTGAGAAAAACTTATACGCGCAGTAAACAGTACATTTTTGTTGCAGCCACTCTTCCAGCAAATGGGAAAAGAACTGCCGGGGCAGTGTTGAAAAAGATGTTTCCAGATGCAATTTGGGTTAATGGAAACTACCTCCATTGTCACAATCCCAGATTGAAGCAAAGGTGGATTGAAACGACATTTGATACTCAGGTGGATGAACTTTTAAAGGCTGTGAATCATGGATTTAAATCCAGATCAGTGGAATTTGATTCTGGTCAATGCCGCACAATGGTATTTGCAAATACTGTTGATGCTGTGGAATCAGTGGCAAAAATATTGATGAGTGCTGGGATTGAATGCTACCTTTACCATAAAGACTGCTCTTTGGAAGACCGTGCAAAGACATTGGTTGATTTCCAAGAGAAAGGTGGAATTCTTGTTTGCACTGATGCTGCTGCACGTGGTATTGACATTCCAAATGTATCACATGTTATTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTATACACAGGGTTGGTCGCACAGCCAGAGCTGGTCAGTATGGACTTGTAACTAGTATGTATAATGAATCCAACCGGGATCTGGTTGCTGCGGTTCGTCGATCAGGGGAACTTGATATGCCTGTGGAGACAGCATTTAGCAGGAAAAGAAGCTTTCGAAATAAGATTAAGAAAAGAGCGGCTTTGCAAAGAATCACGGACTCATCAGCTGCTGAAAAGAGGGCTCTAGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

575

Amino Acids

63.57

Weight (kDa)

6.62

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	95 - 258	3.4e-24	DEAD/DEAH box helicase
Helicase_C	PF00271	417 - 510	8.4e-23	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59990 AT1G59990
fragaria_vesca	FvH4_4g35040 FvH4_4g35040 FvH4_4g35040 FvH4_4g35040
malus_domestica	MD00G1145400.v1.1 MD12G1027800.v1.1 MD13G1086600.v1.1 MD16G1086400.v1.1 MD16G1086500.v1.1
prunus_persica	Prupe.1G260000_v2.0.a1 Prupe.1G260000_v2.0.a1
pyrus_communis	pycom16g07460
rosa_chinensis	RchiOBHm_Chr4g0444581
rosa_laevigata	RLG00000005820
rosa_multiflora	Rmu_sc0003839.1_g000002 Rmu_sc0015511.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385030
rosa_rugosa	Rorug04G0354000 Rorug04G0354000 Rorug04G0354100 Rorug04G0354100
rosa_samantha	Rh4AG414000 Rh4BG425800 Rh4CG440400 Rh4DG421400
rosa_wichuraiana	Rw4G035570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	628
Acc36I	ACCTGC	1 cut(s)	628
AccB7I	CCANNNNNTGG	1 cut(s)	1049
AccBSI	CCGCTC	1 cut(s)	1673
AccII	CGCG	1 cut(s)	1006
AclWI	GGATC	4 cut(s)	590, 638, 814, 1581
AcoI	YGGCCR	3 cut(s)	268, 513, 584
AcsI	RAATTY	3 cut(s)	674, 1232, 1401
AcuI	CTGAAG	2 cut(s)	216, 909
AcvI	CACGTG	1 cut(s)	1430
AdeI	CACNNNGTG	3 cut(s)	494, 569, 686
AfaI	GTAC	1 cut(s)	1019
AfiI	CCNNNNNNNGG	5 cut(s)	670, 745, 1049, 1258, 1576
AflIII	ACRYGT	1 cut(s)	1456
AgsI	TTSAA	7 cut(s)	256, 615, 920, 1078, 1144, 1160, 1325
AhlI	ACTAGT	1 cut(s)	1547
AluBI	AGCT	9 cut(s)	120, 248, 338, 391, 557, 893, 1526, 1647, 1703
AluI	AGCT	9 cut(s)	120, 248, 338, 391, 557, 893, 1526, 1647, 1703
Alw26I	GTCTC	5 cut(s)	761, 878, 901, 969, 1616
AlwI	GGATC	4 cut(s)	590, 638, 814, 1581
AlwNI	CAGNNNCTG	1 cut(s)	1706
AoxI	GGCC	4 cut(s)	262, 268, 513, 584
ApeKI	GCWGC	8 cut(s)	164, 335, 422, 1031, 1421, 1424, 1583, 1703
ApoI	RAATTY	3 cut(s)	674, 1232, 1401
Asp700I	GAANNNNTTC	1 cut(s)	546
AspLEI	GCGC	1 cut(s)	1008
AsuC2I	CCSGG	2 cut(s)	1066, 1571
AsuHPI	GGTGA	1 cut(s)	551
AsuII	TTCGAA	2 cut(s)	508, 1651
BaeI	ACNNNNGTAYC	2 cut(s)	1164, 1197
BalI	TGGCCA	2 cut(s)	515, 586
BanII	GRGCYC	1 cut(s)	1720
BbrPI	CACGTG	1 cut(s)	1430
BbsI	GAAGAC	1 cut(s)	1365
BbvI	GCAGC	8 cut(s)	151, 347, 409, 1043, 1408, 1411, 1570, 1690
BccI	CCATC	2 cut(s)	310, 576
BceAI	ACGGC	1 cut(s)	129
BclI	TGATCA	2 cut(s)	433, 496
BcnI	CCSGG	2 cut(s)	1066, 1571
BcoDI	GTCTC	5 cut(s)	761, 878, 901, 969, 1616
BcuI	ACTAGT	1 cut(s)	1547
BfaI	CTAG	2 cut(s)	1548, 1721
BfmI	CTRYAG	1 cut(s)	1488
BfuAI	ACCTGC	1 cut(s)	628
Bme1390I	CCNGG	2 cut(s)	1066, 1571
BmrFI	CCNGG	2 cut(s)	1066, 1571
BmrI	ACTGGG	3 cut(s)	101, 443, 966
BmsI	GCATC	5 cut(s)	123, 821, 1084, 1270, 1408
BmuI	ACTGGG	3 cut(s)	101, 443, 966
BpiI	GAAGAC	1 cut(s)	1365
BpmI	CTGGAG	1 cut(s)	1000
Bpu14I	TTCGAA	2 cut(s)	508, 1651
BpuEI	CTTGAG	1 cut(s)	228
BpuMI	CCSGG	2 cut(s)	1066, 1571
Bsa29I	ATCGAT	1 cut(s)	642
BsaAI	YACGTR	1 cut(s)	1430
BsaBI	GATNNNNATC	3 cut(s)	432, 811, 1216
BsaJI	CCNNGG	2 cut(s)	265, 1065
BsaWI	WCCGGW	1 cut(s)	771
BsaXI	ACNNNNNCTCC	2 cut(s)	39, 69
Bsc4I	CCNNNNNNNGG	5 cut(s)	670, 745, 1049, 1258, 1576
Bse1I	ACTGG	6 cut(s)	107, 349, 449, 587, 961, 983
Bse3DI	GCAATG	2 cut(s)	403, 848
Bse8I	GATNNNNATC	3 cut(s)	432, 811, 1216
BseCI	ATCGAT	1 cut(s)	642
BseDI	CCNNGG	2 cut(s)	265, 1065
BseGI	GGATG	4 cut(s)	101, 328, 587, 1189
BseJI	GATNNNNATC	3 cut(s)	432, 811, 1216
BseLI	CCNNNNNNNGG	5 cut(s)	670, 745, 1049, 1258, 1576
BseMI	GCAATG	2 cut(s)	403, 848
BseMII	CTCAG	5 cut(s)	82, 565, 807, 912, 1190
BseNI	ACTGG	6 cut(s)	107, 349, 449, 587, 961, 983
BseRI	GAGGAG	1 cut(s)	192
BseXI	GCAGC	8 cut(s)	151, 347, 409, 1043, 1408, 1411, 1570, 1690
BseYI	CCCAGC	2 cut(s)	950, 1316
BsgI	GTGCAG	1 cut(s)	1410
Bsh1236I	CGCG	1 cut(s)	1006
BshFI	GGCC	4 cut(s)	264, 270, 515, 586
BshVI	ATCGAT	1 cut(s)	642
BsiSI	CCGG	3 cut(s)	772, 1065, 1570
BslFI	GGGAC	3 cut(s)	430, 778, 967
BslI	CCNNNNNNNGG	5 cut(s)	670, 745, 1049, 1258, 1576
BsmAI	GTCTC	5 cut(s)	761, 878, 901, 969, 1616
BsmBI	CGTCTC	1 cut(s)	761
BsmFI	GGGAC	3 cut(s)	430, 778, 967
BsmI	GAATGC	2 cut(s)	424, 1331
BsnI	GGCC	4 cut(s)	264, 270, 515, 586
Bsp119I	TTCGAA	2 cut(s)	508, 1651
Bsp1286I	GDGCHC	1 cut(s)	1720
Bsp143I	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
BspANI	GGCC	4 cut(s)	264, 270, 515, 586
BspCNI	CTCAG	5 cut(s)	81, 564, 808, 911, 1189
BspDI	ATCGAT	1 cut(s)	642
BspFNI	CGCG	1 cut(s)	1006
BspMI	ACCTGC	1 cut(s)	628
BspPI	GGATC	4 cut(s)	590, 638, 814, 1581
BspT104I	TTCGAA	2 cut(s)	508, 1651
BsrBI	CCGCTC	1 cut(s)	1673
BsrDI	GCAATG	2 cut(s)	403, 848
BsrI	ACTGG	6 cut(s)	107, 349, 449, 587, 961, 983
BssECI	CCNNGG	2 cut(s)	265, 1065
BssMI	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
Bst4CI	ACNGT	4 cut(s)	365, 1017, 1276, 1364
Bst6I	CTCTTC	4 cut(s)	257, 402, 979, 1044
BstAPI	GCANNNNNTGC	1 cut(s)	1475
BstBAI	YACGTR	1 cut(s)	1430
BstBI	TTCGAA	2 cut(s)	508, 1651
BstC8I	GCNNGC	2 cut(s)	262, 295
BstDEI	CTNAG	5 cut(s)	68, 551, 816, 898, 1176
BstEII	GGTNACC	1 cut(s)	734
BstF5I	GGATG	4 cut(s)	101, 328, 587, 1189
BstFNI	CGCG	1 cut(s)	1006
BstHHI	GCGC	1 cut(s)	1008
BstKTI	GATC	8 cut(s)	436, 499, 598, 646, 809, 1226, 1576, 1598
BstMAI	GTCTC	5 cut(s)	761, 878, 901, 969, 1616
BstMBI	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
BstMWI	GCNNNNNNNGC	6 cut(s)	136, 158, 164, 167, 1475, 1484
BstNSI	RCATGY	1 cut(s)	1460
BstPI	GGTNACC	1 cut(s)	734
BstSCI	CCNGG	2 cut(s)	1064, 1569
BstSFI	CTRYAG	1 cut(s)	1488
BstUI	CGCG	1 cut(s)	1006
BstV1I	GCAGC	8 cut(s)	151, 347, 409, 1043, 1408, 1411, 1570, 1690
BstV2I	GAAGAC	1 cut(s)	1365
BstX2I	RGATCY	2 cut(s)	806, 1573
BstXI	CCANNNNNNTGG	2 cut(s)	803, 1228
BstYI	RGATCY	2 cut(s)	806, 1573
Bsu15I	ATCGAT	1 cut(s)	642
BsuRI	GGCC	4 cut(s)	264, 270, 515, 586
BsuTUI	ATCGAT	1 cut(s)	642
BtsCI	GGATG	4 cut(s)	101, 328, 587, 1189
BtsI	GCAGTG	1 cut(s)	1077
BtsIMutI	CAGTG	4 cut(s)	1077, 1233, 1299, 1413
BveI	ACCTGC	1 cut(s)	628
Cac8I	GCNNGC	2 cut(s)	262, 295
CaiI	CAGNNNCTG	1 cut(s)	1706
CfoI	GCGC	1 cut(s)	1008
ClaI	ATCGAT	1 cut(s)	642
Csp6I	GTAC	1 cut(s)	1018
CviAII	CATG	3 cut(s)	670, 1208, 1457
CviQI	GTAC	1 cut(s)	1018
DdeI	CTNAG	5 cut(s)	68, 551, 816, 898, 1176
DpnI	GATC	8 cut(s)	435, 498, 597, 645, 808, 1225, 1575, 1597
DpnII	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
DraI	TTTAAA	2 cut(s)	1194, 1216
DraIII	CACNNNGTG	3 cut(s)	494, 569, 686
EaeI	YGGCCR	3 cut(s)	268, 513, 584
Eam1104I	CTCTTC	4 cut(s)	257, 402, 979, 1044
EarI	CTCTTC	4 cut(s)	257, 402, 979, 1044
Eco147I	AGGCCT	1 cut(s)	264
Eco24I	GRGCYC	1 cut(s)	1720
Eco57I	CTGAAG	2 cut(s)	216, 909
Eco72I	CACGTG	1 cut(s)	1430
Eco91I	GGTNACC	1 cut(s)	734
EcoO65I	GGTNACC	1 cut(s)	734
EcoRI	GAATTC	1 cut(s)	1401
EcoT38I	GRGCYC	1 cut(s)	1720
Esp3I	CGTCTC	1 cut(s)	761
FaeI	CATG	3 cut(s)	673, 1211, 1460
FalI	AAGNNNNNCTT	2 cut(s)	1660, 1692
FaqI	GGGAC	3 cut(s)	430, 778, 967
FatI	CATG	3 cut(s)	669, 1207, 1456
FauI	CCCGC	1 cut(s)	149
FbaI	TGATCA	2 cut(s)	433, 496
FokI	GGATG	4 cut(s)	88, 335, 594, 1196
FriOI	GRGCYC	1 cut(s)	1720
FspBI	CTAG	2 cut(s)	1548, 1721
GlaI	GCGC	1 cut(s)	1007
GsaI	CCCAGC	2 cut(s)	954, 1320
GsuI	CTGGAG	1 cut(s)	1000
HaeIII	GGCC	4 cut(s)	264, 270, 515, 586
HapII	CCGG	3 cut(s)	772, 1065, 1570
HhaI	GCGC	1 cut(s)	1008
Hin1II	CATG	3 cut(s)	673, 1211, 1460
Hin6I	GCGC	1 cut(s)	1006
HinP1I	GCGC	1 cut(s)	1006
HindIII	AAGCTT	1 cut(s)	1645
HinfI	GANTC	8 cut(s)	428, 836, 1204, 1238, 1289, 1562, 1686, 1694
HpaII	CCGG	3 cut(s)	772, 1065, 1570
HphI	GGTGA	1 cut(s)	551
Hpy166II	GTNNAC	3 cut(s)	213, 542, 1013
Hpy188I	TCNGA	8 cut(s)	71, 232, 433, 554, 817, 841, 865, 901
Hpy188III	TCNNGA	3 cut(s)	599, 1091, 1221
Hpy8I	GTNNAC	3 cut(s)	213, 542, 1013
Hpy99I	CGWCG	2 cut(s)	669, 1596
HpyAV	CCTTC	2 cut(s)	313, 955
HpyCH4III	ACNGT	4 cut(s)	365, 1017, 1276, 1364
HpyCH4IV	ACGT	2 cut(s)	185, 1429
HpyF10VI	GCNNNNNNNGC	6 cut(s)	136, 158, 164, 167, 1475, 1484
HpyF3I	CTNAG	5 cut(s)	68, 551, 816, 898, 1176
HpySE526I	ACGT	2 cut(s)	185, 1429
Hsp92II	CATG	3 cut(s)	673, 1211, 1460
HspAI	GCGC	1 cut(s)	1006
Ksp22I	TGATCA	2 cut(s)	433, 496
Kzo9I	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
Lsp1109I	GCAGC	8 cut(s)	151, 347, 409, 1043, 1408, 1411, 1570, 1690
LweI	GCATC	5 cut(s)	123, 821, 1084, 1270, 1408
MaeI	CTAG	2 cut(s)	1548, 1721
MaeII	ACGT	2 cut(s)	185, 1429
MaeIII	GTNAC	4 cut(s)	484, 734, 1127, 1543
MalI	GATC	8 cut(s)	435, 498, 597, 645, 808, 1225, 1575, 1597
MbiI	CCGCTC	1 cut(s)	1673
MboI	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
MflI	RGATCY	2 cut(s)	806, 1573
MhlI	GDGCHC	1 cut(s)	1720
MlsI	TGGCCA	2 cut(s)	515, 586
MluCI	AATT	4 cut(s)	674, 1098, 1232, 1401
MluNI	TGGCCA	2 cut(s)	515, 586
MlyI	GAGTC	1 cut(s)	1688
MmeI	TCCRAC	2 cut(s)	117, 1590
MnlI	CCTC	9 cut(s)	109, 170, 275, 286, 387, 901, 940, 1130, 1707
Mox20I	TGGCCA	2 cut(s)	515, 586
MroXI	GAANNNNTTC	1 cut(s)	546
MscI	TGGCCA	2 cut(s)	515, 586
MseI	TTAA	5 cut(s)	591, 1107, 1193, 1215, 1662
MslI	CAYNNNNRTG	2 cut(s)	26, 801
Msp20I	TGGCCA	2 cut(s)	515, 586
MspA1I	CMGCKG	3 cut(s)	164, 338, 1703
MspI	CCGG	3 cut(s)	772, 1065, 1570
MspR9I	CCNGG	2 cut(s)	1066, 1571
Mva1269I	GAATGC	2 cut(s)	424, 1331
MvnI	CGCG	1 cut(s)	1006
MwoI	GCNNNNNNNGC	6 cut(s)	136, 158, 164, 167, 1475, 1484
NciI	CCSGG	2 cut(s)	1066, 1571
NdeII	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
NlaIII	CATG	3 cut(s)	673, 1211, 1460
NmeAIII	GCCGAG	1 cut(s)	246
NmuCI	GTSAC	1 cut(s)	1127
NspI	RCATGY	1 cut(s)	1460
NspV	TTCGAA	2 cut(s)	508, 1651
PaqCI	CACCTGC	1 cut(s)	628
PceI	AGGCCT	1 cut(s)	264
PciI	ACATGT	1 cut(s)	1456
PctI	GAATGC	2 cut(s)	424, 1331
PdmI	GAANNNNTTC	1 cut(s)	546
PfeI	GAWTC	7 cut(s)	428, 836, 1204, 1238, 1289, 1562, 1686
PflMI	CCANNNNNTGG	1 cut(s)	1049
PleI	GAGTC	1 cut(s)	1688
PmaCI	CACGTG	1 cut(s)	1430
PmlI	CACGTG	1 cut(s)	1430
PpsI	GAGTC	1 cut(s)	1688
Ppu21I	YACGTR	1 cut(s)	1430
PscI	ACATGT	1 cut(s)	1456
PspCI	CACGTG	1 cut(s)	1430
PspEI	GGTNACC	1 cut(s)	734
PspFI	CCCAGC	2 cut(s)	950, 1316
PstNI	CAGNNNCTG	1 cut(s)	1706
PsuI	RGATCY	2 cut(s)	806, 1573
PvuII	CAGCTG	2 cut(s)	338, 1703
RsaI	GTAC	1 cut(s)	1019
RsaNI	GTAC	1 cut(s)	1018
RseI	CAYNNNNRTG	2 cut(s)	26, 801
SaqAI	TTAA	5 cut(s)	591, 1107, 1193, 1215, 1662
Sau3AI	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1573, 1595
SchI	GAGTC	1 cut(s)	1688
ScrFI	CCNGG	2 cut(s)	1066, 1571
SduI	GDGCHC	1 cut(s)	1720
SfaNI	GCATC	5 cut(s)	123, 821, 1084, 1270, 1408
SfcI	CTRYAG	1 cut(s)	1488
SfuI	TTCGAA	2 cut(s)	508, 1651
SmiI	ATTTAAAT	1 cut(s)	1216
SmiMI	CAYNNNNRTG	2 cut(s)	26, 801
SmlI	CTYRAG	1 cut(s)	243
SmoI	CTYRAG	1 cut(s)	243
SpeI	ACTAGT	1 cut(s)	1547
Sse9I	AATT	4 cut(s)	674, 1098, 1232, 1401
SseBI	AGGCCT	1 cut(s)	264
SspI	AATATT	1 cut(s)	1305
SspMI	CTAG	2 cut(s)	1548, 1721
StuI	AGGCCT	1 cut(s)	264
StyD4I	CCNGG	2 cut(s)	1064, 1569
SwaI	ATTTAAAT	1 cut(s)	1216
TaaI	ACNGT	4 cut(s)	365, 1017, 1276, 1364
TaiI	ACGT	2 cut(s)	188, 1432
TaqI	TCGA	4 cut(s)	508, 642, 1594, 1651
TasI	AATT	4 cut(s)	674, 1098, 1232, 1401
TatI	WGTACW	1 cut(s)	1017
TauI	GCSGC	7 cut(s)	161, 164, 170, 293, 626, 1254, 1676
TfiI	GAWTC	7 cut(s)	428, 836, 1204, 1238, 1289, 1562, 1686
Tru1I	TTAA	5 cut(s)	591, 1107, 1193, 1215, 1662
Tru9I	TTAA	5 cut(s)	591, 1107, 1193, 1215, 1662
TscAI	CASTG	4 cut(s)	1077, 1233, 1299, 1420
TseFI	GTSAC	1 cut(s)	1127
TseI	GCWGC	8 cut(s)	164, 335, 422, 1031, 1421, 1424, 1583, 1703
Tsp45I	GTSAC	1 cut(s)	1127
TspDTI	ATGAA	5 cut(s)	723, 837, 885, 1200, 1575
TspGWI	ACGGA	3 cut(s)	443, 697, 1706
TspRI	CASTG	4 cut(s)	1077, 1233, 1299, 1420
Van91I	CCANNNNNTGG	1 cut(s)	1049
XapI	RAATTY	3 cut(s)	674, 1232, 1401
XceI	RCATGY	1 cut(s)	1460
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1098, 1394, 1573
XmnI	GAANNNNTTC	1 cut(s)	546
XspI	CTAG	2 cut(s)	1548, 1721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.