Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005814

Physical Location & Seq

Genomic Coordinates Forward (+)

64200683 .. 64204304

Gene Structure 3622 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00385030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGCTTCATCGCTCTGCCACAACTATGTTCCTATCATCTTCCCCACCTAAACTCCTATCCCAACTCAGACACTCATACTCTGTTCTTTCCAACCCTTCATCCCCAGCTCGTATCAGCTTGCTTTGGCTCAACCAGCCCCGCCGTTTCGCAACCGCCGCCGCAGCCGCCAAGGGAGGAGATACGTTTTTCGCTGAAGAAAATGTTTCATGGACTTCACTTGGTTTATCCGATAAGGTTTCTCAAGCTCTCTTCAATGCCGGCCTCGGCCAACCCTCTCTTGTTCAGGCGGCTTGCATACCATCTATACTTTCAGGGAAGGATGTGATTGTTGCAGCTGAAACTGGTAGTGGTAAAACGCACAGTTTTCTTGTTCCTCTAATCAATAAGCTATGCAATGAGCAAGAAGAGTCTGGGAATGCTGCTGATTCTGATCAAGGAGTGTCCCCGGTCCGTAAGATTTCTCTGGTGCTTTGTCCAAATGTAACACTTTGTGATCAAGTGGTTCGAATGGCCAATGGTCTTTGTGGTGAAAATGGTGAACCGCTTCTCAGAGCTACATCACTTTGTGGGCGACAGGGATGGCCAGTTAATGATCCTGATATTGTTGTTTCAACACCTGCGGCTCTGCTGAATAATATCGATCCAAACAAATACAAATCCCGTCGCATGGAATTTACACGGAGTGTAAAATATGTGGTGTTTGATGAAGCAGATATGCTTCTCAATGGTGGTTACCAAAATAAGGTTATTCGTCTCATAAACTTTCTCCGGTTTGACGAAAAGCTGTTGTCCCGCTCAAATGGATCTGCATCTGAGTTGCCAATGGACTTGGAATCTGAAACTTCACTGCACTTTAGTTTGGAAGATGAAGAAAATATAGAGACTGAAGCTGTCTCAGAAGATGAGGAAAACTTTGAAGATGATGTTGATGATTTACCTGACGAGGCTGGGACTGGGAAGGTCAAATATAGAGACTGGAGAAGAGTGAGAAAAACTTATACGCGCAGTAAACAATACATTTTTGTTGCAGCCACTCTTCCTGCAAATGGGAAAAGAACTGCTGGGGCAGTGTTGAAAAAGATGTTTCCAGATGCGATTTGGGTTAACGGAAACTACCTCCATTGTCACAATCCCAGATTGAAGCAAAGGTGGATTGAAACGACATTTGATACTCAGGTGGATGAACTTATAAAGGCTGTGAATCATGGATTTAAATCCAGATCAGTGGAATTTGATTCTGGTCAATGCCGCACAATGGTATTTGCAAATACTGTTGATGCTGTGGAATCAGTGGCAAAAATATTGATGAGTGCTGGGATTGAATGCTACCTTTACCATAAAGACTGCTCTTTGGAAGACCGTGCAAAGACATTGGTTGATTTCAAGAGAAAGGTGGAATTCTTGTTTGCACTGATGCTGCTGCACGTGGCAGACTTTGCTACTTCTGCTGTAGATTTTATACACAGGGTTGGTCGCACAGCTAGAGCTGGTCAGTATGGACTTGTAACTAGTATGTATAATGAATCCAACCGGGATCTGGTTGCTGCAGTTCGTCGATCAGGGGAACTTGATATGCCTGTGGAGACGGCATTTAGCAGGAAAAGAAGCTTTCGAAATAAGATTAAGAAAAGAGCGGCTTTGCAAAGAATCACGGACTCATCAGCTGCTGAAAAGAGGGCTCTAGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

562

Amino Acids

62.42

Weight (kDa)

7.95

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	94 - 257	2.5e-24	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59990 AT1G59990
fragaria_vesca	FvH4_4g35040 FvH4_4g35040 FvH4_4g35040 FvH4_4g35040
malus_domestica	MD00G1145400.v1.1 MD12G1027800.v1.1 MD13G1086600.v1.1 MD16G1086400.v1.1 MD16G1086500.v1.1
prunus_persica	Prupe.1G260000_v2.0.a1 Prupe.1G260000_v2.0.a1
pyrus_communis	pycom16g07460
rosa_chinensis	RchiOBHm_Chr4g0444581
rosa_laevigata	RLG00000005820
rosa_multiflora	Rmu_sc0003839.1_g000002 Rmu_sc0015511.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385030
rosa_rugosa	Rorug04G0354000 Rorug04G0354000 Rorug04G0354100 Rorug04G0354100
rosa_samantha	Rh4AG414000 Rh4BG425800 Rh4CG440400 Rh4DG421400
rosa_wichuraiana	Rw4G035570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1190
AarI	CACCTGC	1 cut(s)	625
Acc36I	ACCTGC	1 cut(s)	625
AccBSI	CCGCTC	2 cut(s)	795, 1634
AccII	CGCG	1 cut(s)	1003
AclWI	GGATC	4 cut(s)	587, 635, 811, 1542
AcoI	YGGCCR	3 cut(s)	265, 510, 581
AcsI	RAATTY	3 cut(s)	671, 1229, 1397
AcuI	CTGAAG	2 cut(s)	213, 906
AcvI	CACGTG	1 cut(s)	1426
AdeI	CACNNNGTG	3 cut(s)	491, 566, 683
AfiI	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1537
AgsI	TTSAA	8 cut(s)	253, 612, 917, 1075, 1141, 1157, 1322, 1384
AhlI	ACTAGT	1 cut(s)	1508
Alw26I	GTCTC	5 cut(s)	758, 875, 898, 966, 1577
AlwI	GGATC	4 cut(s)	587, 635, 811, 1542
AlwNI	CAGNNNCTG	1 cut(s)	1667
AoxI	GGCC	4 cut(s)	259, 265, 510, 581
ApeKI	GCWGC	8 cut(s)	161, 332, 419, 1028, 1417, 1420, 1544, 1664
ApoI	RAATTY	3 cut(s)	671, 1229, 1397
Asp700I	GAANNNNTTC	1 cut(s)	543
AspLEI	GCGC	1 cut(s)	1005
AspS9I	GGNCC	1 cut(s)	448
AsuC2I	CCSGG	2 cut(s)	446, 1532
AsuHPI	GGTGA	2 cut(s)	539, 548
AsuII	TTCGAA	2 cut(s)	505, 1612
AvaII	GGWCC	1 cut(s)	448
BaeI	ACNNNNGTAYC	2 cut(s)	1161, 1194
BalI	TGGCCA	2 cut(s)	512, 583
BanII	GRGCYC	1 cut(s)	1681
BbrPI	CACGTG	1 cut(s)	1426
BbsI	GAAGAC	1 cut(s)	1362
BbvI	GCAGC	8 cut(s)	173, 344, 406, 1040, 1404, 1407, 1531, 1651
BccI	CCATC	2 cut(s)	307, 573
BceAI	ACGGC	2 cut(s)	126, 1602
BclI	TGATCA	2 cut(s)	430, 493
BcnI	CCSGG	2 cut(s)	446, 1532
BcoDI	GTCTC	5 cut(s)	758, 875, 898, 966, 1577
BcuI	ACTAGT	1 cut(s)	1508
BfaI	CTAG	3 cut(s)	1482, 1509, 1682
BfmI	CTRYAG	2 cut(s)	1449, 1545
BfuAI	ACCTGC	1 cut(s)	625
Bme1390I	CCNGG	2 cut(s)	446, 1532
Bme18I	GGWCC	1 cut(s)	448
BmgT120I	GGNCC	1 cut(s)	448
BmrFI	CCNGG	2 cut(s)	446, 1532
BmrI	ACTGGG	1 cut(s)	963
BmsI	GCATC	4 cut(s)	818, 1081, 1267, 1404
BmuI	ACTGGG	1 cut(s)	963
BpiI	GAAGAC	1 cut(s)	1362
BpmI	CTGGAG	1 cut(s)	997
Bpu14I	TTCGAA	2 cut(s)	505, 1612
BpuEI	CTTGAG	1 cut(s)	225
BpuMI	CCSGG	2 cut(s)	446, 1532
Bsa29I	ATCGAT	1 cut(s)	639
BsaAI	YACGTR	1 cut(s)	1426
BsaBI	GATNNNNATC	3 cut(s)	429, 808, 1213
BsaJI	CCNNGG	3 cut(s)	168, 262, 444
BsaWI	WCCGGW	1 cut(s)	768
BsaXI	ACNNNNNCTCC	2 cut(s)	36, 66
Bsc4I	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1537
Bse118I	RCCGGY	1 cut(s)	257
Bse1I	ACTGG	4 cut(s)	346, 584, 958, 980
Bse3DI	GCAATG	1 cut(s)	400
Bse8I	GATNNNNATC	3 cut(s)	429, 808, 1213
BseCI	ATCGAT	1 cut(s)	639
BseDI	CCNNGG	3 cut(s)	168, 262, 444
BseGI	GGATG	4 cut(s)	98, 325, 584, 1186
BseJI	GATNNNNATC	3 cut(s)	429, 808, 1213
BseLI	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1537
BseMI	GCAATG	1 cut(s)	400
BseMII	CTCAG	5 cut(s)	79, 562, 804, 909, 1187
BseNI	ACTGG	4 cut(s)	346, 584, 958, 980
BseRI	GAGGAG	1 cut(s)	189
BseXI	GCAGC	8 cut(s)	173, 344, 406, 1040, 1404, 1407, 1531, 1651
BseYI	CCCAGC	4 cut(s)	103, 947, 1061, 1313
BsgI	GTGCAG	2 cut(s)	833, 1406
Bsh1236I	CGCG	1 cut(s)	1003
BshFI	GGCC	4 cut(s)	261, 267, 512, 583
BshVI	ATCGAT	1 cut(s)	639
BsiSI	CCGG	4 cut(s)	258, 446, 769, 1531
BslFI	GGGAC	3 cut(s)	427, 775, 964
BslI	CCNNNNNNNGG	5 cut(s)	667, 742, 1046, 1255, 1537
BsmAI	GTCTC	5 cut(s)	758, 875, 898, 966, 1577
BsmBI	CGTCTC	2 cut(s)	758, 1577
BsmFI	GGGAC	3 cut(s)	427, 775, 964
BsmI	GAATGC	2 cut(s)	421, 1328
BsnI	GGCC	4 cut(s)	261, 267, 512, 583
Bsp119I	TTCGAA	2 cut(s)	505, 1612
Bsp1286I	GDGCHC	1 cut(s)	1681
Bsp143I	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
BspANI	GGCC	4 cut(s)	261, 267, 512, 583
BspCNI	CTCAG	5 cut(s)	78, 561, 805, 908, 1186
BspDI	ATCGAT	1 cut(s)	639
BspFNI	CGCG	1 cut(s)	1003
BspMAI	CTGCAG	1 cut(s)	1549
BspMI	ACCTGC	1 cut(s)	625
BspPI	GGATC	4 cut(s)	587, 635, 811, 1542
BspT104I	TTCGAA	2 cut(s)	505, 1612
BsrBI	CCGCTC	2 cut(s)	795, 1634
BsrDI	GCAATG	1 cut(s)	400
BsrFI	RCCGGY	1 cut(s)	257
BsrI	ACTGG	4 cut(s)	346, 584, 958, 980
BssAI	RCCGGY	1 cut(s)	257
BssECI	CCNNGG	3 cut(s)	168, 262, 444
BssMI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
BssT1I	CCWWGG	1 cut(s)	168
Bst4CI	ACNGT	3 cut(s)	362, 1273, 1361
Bst6I	CTCTTC	4 cut(s)	254, 399, 976, 1041
BstAPI	GCANNNNNTGC	1 cut(s)	1436
BstBAI	YACGTR	1 cut(s)	1426
BstBI	TTCGAA	2 cut(s)	505, 1612
BstC8I	GCNNGC	3 cut(s)	119, 259, 292
BstDEI	CTNAG	5 cut(s)	65, 548, 813, 895, 1173
BstEII	GGTNACC	1 cut(s)	731
BstF5I	GGATG	4 cut(s)	98, 325, 584, 1186
BstFNI	CGCG	1 cut(s)	1003
BstHHI	GCGC	1 cut(s)	1005
BstKTI	GATC	8 cut(s)	433, 496, 595, 643, 806, 1223, 1537, 1559
BstMAI	GTCTC	5 cut(s)	758, 875, 898, 966, 1577
BstMBI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
BstMWI	GCNNNNNNNGC	6 cut(s)	133, 155, 161, 164, 1436, 1445
BstPI	GGTNACC	1 cut(s)	731
BstSCI	CCNGG	2 cut(s)	444, 1530
BstSFI	CTRYAG	2 cut(s)	1449, 1545
BstUI	CGCG	1 cut(s)	1003
BstV1I	GCAGC	8 cut(s)	173, 344, 406, 1040, 1404, 1407, 1531, 1651
BstV2I	GAAGAC	1 cut(s)	1362
BstX2I	RGATCY	2 cut(s)	803, 1534
BstXI	CCANNNNNNTGG	1 cut(s)	1225
BstYI	RGATCY	2 cut(s)	803, 1534
Bsu15I	ATCGAT	1 cut(s)	639
BsuRI	GGCC	4 cut(s)	261, 267, 512, 583
BsuTUI	ATCGAT	1 cut(s)	639
BtsCI	GGATG	4 cut(s)	98, 325, 584, 1186
BtsI	GCAGTG	2 cut(s)	845, 1074
BtsIMutI	CAGTG	5 cut(s)	845, 1074, 1230, 1296, 1409
BveI	ACCTGC	1 cut(s)	625
Cac8I	GCNNGC	3 cut(s)	119, 259, 292
CaiI	CAGNNNCTG	1 cut(s)	1667
CfoI	GCGC	1 cut(s)	1005
Cfr10I	RCCGGY	1 cut(s)	257
Cfr13I	GGNCC	1 cut(s)	448
ClaI	ATCGAT	1 cut(s)	639
CpoI	CGGWCCG	1 cut(s)	448
CspI	CGGWCCG	1 cut(s)	448
CviAII	CATG	3 cut(s)	207, 667, 1205
DdeI	CTNAG	5 cut(s)	65, 548, 813, 895, 1173
DpnI	GATC	8 cut(s)	432, 495, 594, 642, 805, 1222, 1536, 1558
DpnII	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
DraI	TTTAAA	1 cut(s)	1213
DraIII	CACNNNGTG	3 cut(s)	491, 566, 683
EaeI	YGGCCR	3 cut(s)	265, 510, 581
Eam1104I	CTCTTC	4 cut(s)	254, 399, 976, 1041
EarI	CTCTTC	4 cut(s)	254, 399, 976, 1041
Eco130I	CCWWGG	1 cut(s)	168
Eco24I	GRGCYC	1 cut(s)	1681
Eco47I	GGWCC	1 cut(s)	448
Eco57I	CTGAAG	2 cut(s)	213, 906
Eco72I	CACGTG	1 cut(s)	1426
Eco91I	GGTNACC	1 cut(s)	731
EcoO65I	GGTNACC	1 cut(s)	731
EcoRI	GAATTC	1 cut(s)	1397
EcoT14I	CCWWGG	1 cut(s)	168
EcoT38I	GRGCYC	1 cut(s)	1681
ErhI	CCWWGG	1 cut(s)	168
Esp3I	CGTCTC	2 cut(s)	758, 1577
FaeI	CATG	3 cut(s)	210, 670, 1208
FalI	AAGNNNNNCTT	2 cut(s)	1621, 1653
FaqI	GGGAC	3 cut(s)	427, 775, 964
FatI	CATG	3 cut(s)	206, 666, 1204
FauI	CCCGC	2 cut(s)	146, 800
FbaI	TGATCA	2 cut(s)	430, 493
FokI	GGATG	4 cut(s)	85, 332, 591, 1193
FriOI	GRGCYC	1 cut(s)	1681
FspBI	CTAG	3 cut(s)	1482, 1509, 1682
GlaI	GCGC	1 cut(s)	1004
GsaI	CCCAGC	4 cut(s)	107, 951, 1065, 1317
GsuI	CTGGAG	1 cut(s)	997
HaeIII	GGCC	4 cut(s)	261, 267, 512, 583
HapII	CCGG	4 cut(s)	258, 446, 769, 1531
HhaI	GCGC	1 cut(s)	1005
Hin1II	CATG	3 cut(s)	210, 670, 1208
Hin6I	GCGC	1 cut(s)	1003
HinP1I	GCGC	1 cut(s)	1003
HincII	GTYRAC	1 cut(s)	1105
HindII	GTYRAC	1 cut(s)	1105
HindIII	AAGCTT	1 cut(s)	1606
HinfI	GANTC	9 cut(s)	407, 425, 833, 1201, 1235, 1286, 1523, 1647, 1655
HpaI	GTTAAC	1 cut(s)	1105
HpaII	CCGG	4 cut(s)	258, 446, 769, 1531
HphI	GGTGA	2 cut(s)	539, 548
Hpy166II	GTNNAC	3 cut(s)	539, 1010, 1105
Hpy188I	TCNGA	7 cut(s)	68, 229, 430, 551, 814, 838, 898
Hpy188III	TCNNGA	4 cut(s)	596, 1088, 1218, 1384
Hpy8I	GTNNAC	3 cut(s)	539, 1010, 1105
Hpy99I	CGWCG	2 cut(s)	666, 1557
HpyAV	CCTTC	3 cut(s)	105, 310, 952
HpyCH4III	ACNGT	3 cut(s)	362, 1273, 1361
HpyCH4IV	ACGT	2 cut(s)	182, 1425
HpyF10VI	GCNNNNNNNGC	6 cut(s)	133, 155, 161, 164, 1436, 1445
HpyF3I	CTNAG	5 cut(s)	65, 548, 813, 895, 1173
HpySE526I	ACGT	2 cut(s)	182, 1425
Hsp92II	CATG	3 cut(s)	210, 670, 1208
HspAI	GCGC	1 cut(s)	1003
KroI	GCCGGC	1 cut(s)	257
KroNI	GCCGGC	1 cut(s)	259
Ksp22I	TGATCA	2 cut(s)	430, 493
KspAI	GTTAAC	1 cut(s)	1105
Kzo9I	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
Lsp1109I	GCAGC	8 cut(s)	173, 344, 406, 1040, 1404, 1407, 1531, 1651
LweI	GCATC	4 cut(s)	818, 1081, 1267, 1404
MaeI	CTAG	3 cut(s)	1482, 1509, 1682
MaeII	ACGT	2 cut(s)	182, 1425
MaeIII	GTNAC	4 cut(s)	481, 731, 1124, 1504
MalI	GATC	8 cut(s)	432, 495, 594, 642, 805, 1222, 1536, 1558
MbiI	CCGCTC	2 cut(s)	795, 1634
MboI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
MflI	RGATCY	2 cut(s)	803, 1534
MhlI	GDGCHC	1 cut(s)	1681
MlsI	TGGCCA	2 cut(s)	512, 583
MluCI	AATT	3 cut(s)	671, 1229, 1397
MluNI	TGGCCA	2 cut(s)	512, 583
MlyI	GAGTC	2 cut(s)	416, 1649
MmeI	TCCRAC	2 cut(s)	114, 1551
MnlI	CCTC	8 cut(s)	167, 272, 283, 384, 898, 937, 1127, 1668
Mox20I	TGGCCA	2 cut(s)	512, 583
MroNI	GCCGGC	1 cut(s)	257
MroXI	GAANNNNTTC	1 cut(s)	543
MscI	TGGCCA	2 cut(s)	512, 583
MseI	TTAA	4 cut(s)	588, 1104, 1212, 1623
MslI	CAYNNNNRTG	1 cut(s)	23
Msp20I	TGGCCA	2 cut(s)	512, 583
MspA1I	CMGCKG	2 cut(s)	335, 1664
MspI	CCGG	4 cut(s)	258, 446, 769, 1531
MspR9I	CCNGG	2 cut(s)	446, 1532
Mva1269I	GAATGC	2 cut(s)	421, 1328
MvnI	CGCG	1 cut(s)	1003
MwoI	GCNNNNNNNGC	6 cut(s)	133, 155, 161, 164, 1436, 1445
NaeI	GCCGGC	1 cut(s)	259
NciI	CCSGG	2 cut(s)	446, 1532
NdeII	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
NgoMIV	GCCGGC	1 cut(s)	257
NlaIII	CATG	3 cut(s)	210, 670, 1208
NmeAIII	GCCGAG	1 cut(s)	243
NmuCI	GTSAC	1 cut(s)	1124
NspV	TTCGAA	2 cut(s)	505, 1612
PaqCI	CACCTGC	1 cut(s)	625
PctI	GAATGC	2 cut(s)	421, 1328
PdiI	GCCGGC	1 cut(s)	259
PdmI	GAANNNNTTC	1 cut(s)	543
PfeI	GAWTC	7 cut(s)	425, 833, 1201, 1235, 1286, 1523, 1647
PleI	GAGTC	2 cut(s)	415, 1649
PmaCI	CACGTG	1 cut(s)	1426
PmlI	CACGTG	1 cut(s)	1426
PpsI	GAGTC	2 cut(s)	415, 1649
Ppu21I	YACGTR	1 cut(s)	1426
PsiI	TTATAA	1 cut(s)	1190
PspCI	CACGTG	1 cut(s)	1426
PspEI	GGTNACC	1 cut(s)	731
PspFI	CCCAGC	4 cut(s)	103, 947, 1061, 1313
PspPI	GGNCC	1 cut(s)	448
PstI	CTGCAG	1 cut(s)	1549
PstNI	CAGNNNCTG	1 cut(s)	1667
PsuI	RGATCY	2 cut(s)	803, 1534
PvuII	CAGCTG	2 cut(s)	335, 1664
RseI	CAYNNNNRTG	1 cut(s)	23
Rsr2I	CGGWCCG	1 cut(s)	448
RsrII	CGGWCCG	1 cut(s)	448
SaqAI	TTAA	4 cut(s)	588, 1104, 1212, 1623
Sau3AI	GATC	8 cut(s)	430, 493, 592, 640, 803, 1220, 1534, 1556
Sau96I	GGNCC	1 cut(s)	448
SchI	GAGTC	2 cut(s)	416, 1649
ScrFI	CCNGG	2 cut(s)	446, 1532
SduI	GDGCHC	1 cut(s)	1681
SfaNI	GCATC	4 cut(s)	818, 1081, 1267, 1404
SfcI	CTRYAG	2 cut(s)	1449, 1545
SfuI	TTCGAA	2 cut(s)	505, 1612
SinI	GGWCC	1 cut(s)	448
SmiI	ATTTAAAT	1 cut(s)	1213
SmiMI	CAYNNNNRTG	1 cut(s)	23
SmlI	CTYRAG	1 cut(s)	240
SmoI	CTYRAG	1 cut(s)	240
SpeI	ACTAGT	1 cut(s)	1508
Sse9I	AATT	3 cut(s)	671, 1229, 1397
SspI	AATATT	1 cut(s)	1302
SspMI	CTAG	3 cut(s)	1482, 1509, 1682
StyD4I	CCNGG	2 cut(s)	444, 1530
StyI	CCWWGG	1 cut(s)	168
SwaI	ATTTAAAT	1 cut(s)	1213
TaaI	ACNGT	3 cut(s)	362, 1273, 1361
TaiI	ACGT	2 cut(s)	185, 1428
TaqI	TCGA	4 cut(s)	505, 639, 1555, 1612
TasI	AATT	3 cut(s)	671, 1229, 1397
TauI	GCSGC	7 cut(s)	158, 161, 167, 290, 623, 1251, 1637
TfiI	GAWTC	7 cut(s)	425, 833, 1201, 1235, 1286, 1523, 1647
Tru1I	TTAA	4 cut(s)	588, 1104, 1212, 1623
Tru9I	TTAA	4 cut(s)	588, 1104, 1212, 1623
TscAI	CASTG	5 cut(s)	852, 1074, 1230, 1296, 1416
TseFI	GTSAC	1 cut(s)	1124
TseI	GCWGC	8 cut(s)	161, 332, 419, 1028, 1417, 1420, 1544, 1664
Tsp45I	GTSAC	1 cut(s)	1124
TspDTI	ATGAA	6 cut(s)	87, 195, 720, 882, 1197, 1536
TspGWI	ACGGA	4 cut(s)	440, 694, 1122, 1667
TspRI	CASTG	5 cut(s)	852, 1074, 1230, 1296, 1416
VpaK11BI	GGWCC	1 cut(s)	448
XapI	RAATTY	3 cut(s)	671, 1229, 1397
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1095, 1534
XmnI	GAANNNNTTC	1 cut(s)	543
XspI	CTAG	3 cut(s)	1482, 1509, 1682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.