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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g30941 FvH4_5g02451 FvH4_5g17361 FvH4_5g17362 |
| rosa_chinensis | RchiOBHm_Chr1g0383661 RchiOBHm_Chr4g0407001 RchiOBHm_Chr5g0029671 |
| rosa_multiflora | Rmu_sc0000665.1_g000017 Rmu_sc0011574.1_g000005 Rmu_sc0011574.1_g000006 Rmu_ssc0000135.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00256940 Rroxscaffold_4G00289440 Rroxscaffold_7G00179290 |
| rosa_rugosa | Rorug04G0076400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1317 |
| Acc65I | GGTACC | 1 cut(s) | 1523 |
| AccB1I | GGYRCC | 1 cut(s) | 1523 |
| AccI | GTMKAC | 1 cut(s) | 339 |
| AciI | CCGC | 1 cut(s) | 647 |
| AcsI | RAATTY | 6 cut(s) | 363, 653, 670, 694, 831, 1032 |
| AcuI | CTGAAG | 2 cut(s) | 365, 768 |
| AcyI | GRCGYC | 1 cut(s) | 1314 |
| AfaI | GTAC | 9 cut(s) | 6, 149, 549, 612, 1164, 1525, 1597, 1615, 1637 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 63, 908 |
| AflIII | ACRYGT | 4 cut(s) | 425, 607, 1513, 1592 |
| AgsI | TTSAA | 8 cut(s) | 88, 572, 675, 701, 875, 1058, 1390, 1590 |
| AjnI | CCWGG | 2 cut(s) | 863, 1272 |
| AleI | CACNNNNGTG | 1 cut(s) | 1514 |
| AluBI | AGCT | 5 cut(s) | 52, 181, 247, 1022, 1054 |
| AluI | AGCT | 5 cut(s) | 52, 181, 247, 1022, 1054 |
| Alw26I | GTCTC | 5 cut(s) | 246, 549, 655, 1166, 1334 |
| AoxI | GGCC | 3 cut(s) | 376, 890, 1422 |
| ApeKI | GCWGC | 5 cut(s) | 1019, 1349, 1400, 1403, 1532 |
| ApoI | RAATTY | 6 cut(s) | 363, 653, 670, 694, 831, 1032 |
| AseI | ATTAAT | 1 cut(s) | 744 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 654 |
| Asp718I | GGTACC | 1 cut(s) | 1523 |
| AspLEI | GCGC | 1 cut(s) | 79 |
| AspS9I | GGNCC | 2 cut(s) | 890, 1276 |
| AsuHPI | GGTGA | 2 cut(s) | 466, 1346 |
| AvaII | GGWCC | 1 cut(s) | 1276 |
| BanI | GGYRCC | 1 cut(s) | 1523 |
| BauI | CACGAG | 2 cut(s) | 519, 1007 |
| BbsI | GAAGAC | 1 cut(s) | 295 |
| BbvI | GCAGC | 5 cut(s) | 1031, 1336, 1387, 1390, 1519 |
| BccI | CCATC | 3 cut(s) | 521, 856, 1127 |
| BciT130I | CCWGG | 2 cut(s) | 865, 1274 |
| BclI | TGATCA | 3 cut(s) | 442, 880, 1434 |
| BcoDI | GTCTC | 5 cut(s) | 246, 549, 655, 1166, 1334 |
| BfaI | CTAG | 5 cut(s) | 315, 507, 855, 1520, 1602 |
| BfoI | RGCGCY | 1 cut(s) | 80 |
| BisI | GCNGC | 5 cut(s) | 1020, 1350, 1401, 1404, 1533 |
| BlsI | GCNGC | 5 cut(s) | 1021, 1351, 1402, 1405, 1534 |
| BmcAI | AGTACT | 1 cut(s) | 1164 |
| Bme1390I | CCNGG | 2 cut(s) | 865, 1274 |
| Bme18I | GGWCC | 1 cut(s) | 1276 |
| BmgT120I | GGNCC | 2 cut(s) | 890, 1276 |
| BmiI | GGNNCC | 1 cut(s) | 1525 |
| BmrFI | CCNGG | 2 cut(s) | 865, 1274 |
| BmrI | ACTGGG | 1 cut(s) | 352 |
| BmsI | GCATC | 4 cut(s) | 459, 634, 1238, 1630 |
| BmuI | ACTGGG | 1 cut(s) | 352 |
| BpiI | GAAGAC | 1 cut(s) | 295 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 189, 221 |
| BpuEI | CTTGAG | 3 cut(s) | 29, 346, 664 |
| BsaAI | YACGTR | 1 cut(s) | 610 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1305 |
| BsaHI | GRCGYC | 1 cut(s) | 1314 |
| BsaI | GGTCTC | 2 cut(s) | 1166, 1334 |
| BsaJI | CCNNGG | 1 cut(s) | 864 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 912, 942 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 63, 908 |
| Bse1I | ACTGG | 1 cut(s) | 347 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1305 |
| BseBI | CCWGG | 2 cut(s) | 865, 1274 |
| BseDI | CCNNGG | 1 cut(s) | 864 |
| BseGI | GGATG | 3 cut(s) | 532, 649, 1138 |
| BseJI | GATNNNNATC | 1 cut(s) | 1305 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 63, 908 |
| BseMII | CTCAG | 6 cut(s) | 257, 441, 650, 1037, 1224, 1646 |
| BseNI | ACTGG | 1 cut(s) | 347 |
| BseRI | GAGGAG | 1 cut(s) | 347 |
| BseXI | GCAGC | 5 cut(s) | 1031, 1336, 1387, 1390, 1519 |
| BseYI | CCCAGC | 1 cut(s) | 750 |
| BshFI | GGCC | 3 cut(s) | 378, 892, 1424 |
| BshNI | GGYRCC | 1 cut(s) | 1523 |
| BsiWI | CGTACG | 1 cut(s) | 147 |
| BslFI | GGGAC | 1 cut(s) | 669 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 63, 908 |
| BsmAI | GTCTC | 5 cut(s) | 246, 549, 655, 1166, 1334 |
| BsmFI | GGGAC | 1 cut(s) | 669 |
| BsmI | GAATGC | 3 cut(s) | 73, 94, 584 |
| BsnI | GGCC | 3 cut(s) | 378, 892, 1424 |
| Bso31I | GGTCTC | 2 cut(s) | 1166, 1334 |
| Bsp143I | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| BspACI | CCGC | 1 cut(s) | 647 |
| BspANI | GGCC | 3 cut(s) | 378, 892, 1424 |
| BspCNI | CTCAG | 6 cut(s) | 256, 442, 651, 1036, 1223, 1645 |
| BspHI | TCATGA | 1 cut(s) | 598 |
| BspLI | GGNNCC | 1 cut(s) | 1525 |
| BspQI | GCTCTTC | 1 cut(s) | 1359 |
| BspT107I | GGYRCC | 1 cut(s) | 1523 |
| BspTNI | GGTCTC | 2 cut(s) | 1166, 1334 |
| BsrI | ACTGG | 1 cut(s) | 347 |
| BssECI | CCNNGG | 1 cut(s) | 864 |
| BssMI | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| BssNI | GRCGYC | 1 cut(s) | 1314 |
| BssSI | CACGAG | 2 cut(s) | 519, 1007 |
| Bst2BI | CACGAG | 2 cut(s) | 519, 1007 |
| Bst2UI | CCWGG | 2 cut(s) | 865, 1274 |
| Bst4CI | ACNGT | 2 cut(s) | 394, 409 |
| Bst6I | CTCTTC | 1 cut(s) | 1359 |
| BstACI | GRCGYC | 1 cut(s) | 1314 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1541 |
| BstBAI | YACGTR | 1 cut(s) | 610 |
| BstC8I | GCNNGC | 3 cut(s) | 54, 58, 951 |
| BstDEI | CTNAG | 7 cut(s) | 224, 243, 450, 659, 1023, 1210, 1632 |
| BstF5I | GGATG | 3 cut(s) | 532, 649, 1138 |
| BstH2I | RGCGCY | 1 cut(s) | 80 |
| BstHHI | GCGC | 1 cut(s) | 79 |
| BstKTI | GATC | 7 cut(s) | 445, 598, 883, 1048, 1437, 1495, 1582 |
| BstMAI | GTCTC | 5 cut(s) | 246, 549, 655, 1166, 1334 |
| BstMBI | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 53, 785, 898, 1226, 1541, 1607 |
| BstNI | CCWGG | 2 cut(s) | 865, 1274 |
| BstNSI | RCATGY | 5 cut(s) | 429, 589, 1199, 1517, 1596 |
| BstSCI | CCNGG | 2 cut(s) | 863, 1272 |
| BstV1I | GCAGC | 5 cut(s) | 1031, 1336, 1387, 1390, 1519 |
| BstV2I | GAAGAC | 1 cut(s) | 295 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1378 |
| BsuRI | GGCC | 3 cut(s) | 378, 892, 1424 |
| BtsCI | GGATG | 3 cut(s) | 532, 649, 1138 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 2 cut(s) | 309, 414 |
| Cac8I | GCNNGC | 3 cut(s) | 54, 58, 951 |
| CciI | TCATGA | 1 cut(s) | 598 |
| CfoI | GCGC | 1 cut(s) | 79 |
| Cfr13I | GGNCC | 2 cut(s) | 890, 1276 |
| Csp6I | GTAC | 9 cut(s) | 5, 148, 548, 611, 1163, 1524, 1596, 1614, 1636 |
| CviQI | GTAC | 9 cut(s) | 5, 148, 548, 611, 1163, 1524, 1596, 1614, 1636 |
| DdeI | CTNAG | 7 cut(s) | 224, 243, 450, 659, 1023, 1210, 1632 |
| DpnI | GATC | 7 cut(s) | 444, 597, 882, 1047, 1436, 1494, 1581 |
| DpnII | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| Eam1104I | CTCTTC | 1 cut(s) | 1359 |
| EarI | CTCTTC | 1 cut(s) | 1359 |
| Eco147I | AGGCCT | 1 cut(s) | 378 |
| Eco31I | GGTCTC | 2 cut(s) | 1166, 1334 |
| Eco47I | GGWCC | 1 cut(s) | 1276 |
| Eco57I | CTGAAG | 2 cut(s) | 365, 768 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1276 |
| EcoRII | CCWGG | 2 cut(s) | 863, 1272 |
| EcoT22I | ATGCAT | 1 cut(s) | 795 |
| FaqI | GGGAC | 1 cut(s) | 669 |
| FbaI | TGATCA | 3 cut(s) | 442, 880, 1434 |
| FblI | GTMKAC | 1 cut(s) | 339 |
| Fnu4HI | GCNGC | 5 cut(s) | 1020, 1350, 1401, 1404, 1533 |
| FokI | GGATG | 3 cut(s) | 539, 656, 1145 |
| Fsp4HI | GCNGC | 5 cut(s) | 1020, 1350, 1401, 1404, 1533 |
| FspBI | CTAG | 5 cut(s) | 315, 507, 855, 1520, 1602 |
| GlaI | GCGC | 1 cut(s) | 78 |
| GluI | GCNGC | 5 cut(s) | 1020, 1350, 1401, 1404, 1533 |
| GsaI | CCCAGC | 1 cut(s) | 754 |
| HaeII | RGCGCY | 1 cut(s) | 80 |
| HaeIII | GGCC | 3 cut(s) | 378, 892, 1424 |
| HhaI | GCGC | 1 cut(s) | 79 |
| Hin1I | GRCGYC | 1 cut(s) | 1314 |
| Hin6I | GCGC | 1 cut(s) | 77 |
| HinP1I | GCGC | 1 cut(s) | 77 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 5 cut(s) | 371, 568, 921, 939, 1483 |
| HphI | GGTGA | 2 cut(s) | 466, 1346 |
| Hpy166II | GTNNAC | 2 cut(s) | 340, 457 |
| Hpy188I | TCNGA | 9 cut(s) | 287, 361, 384, 447, 660, 1038, 1213, 1234, 1482 |
| Hpy188III | TCNNGA | 7 cut(s) | 368, 572, 599, 686, 1007, 1310, 1487 |
| Hpy8I | GTNNAC | 2 cut(s) | 340, 457 |
| HpyAV | CCTTC | 6 cut(s) | 92, 389, 683, 792, 1033, 1596 |
| HpyCH4III | ACNGT | 2 cut(s) | 394, 409 |
| HpyCH4IV | ACGT | 2 cut(s) | 609, 1314 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 53, 785, 898, 1226, 1541, 1607 |
| HpyF3I | CTNAG | 7 cut(s) | 224, 243, 450, 659, 1023, 1210, 1632 |
| HpySE526I | ACGT | 2 cut(s) | 609, 1314 |
| Hsp92I | GRCGYC | 1 cut(s) | 1314 |
| HspAI | GCGC | 1 cut(s) | 77 |
| KpnI | GGTACC | 1 cut(s) | 1527 |
| Ksp22I | TGATCA | 3 cut(s) | 442, 880, 1434 |
| Kzo9I | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| LguI | GCTCTTC | 1 cut(s) | 1359 |
| Lsp1109I | GCAGC | 5 cut(s) | 1031, 1336, 1387, 1390, 1519 |
| LweI | GCATC | 4 cut(s) | 459, 634, 1238, 1630 |
| MaeI | CTAG | 5 cut(s) | 315, 507, 855, 1520, 1602 |
| MaeII | ACGT | 2 cut(s) | 609, 1314 |
| MaeIII | GTNAC | 5 cut(s) | 388, 421, 1026, 1334, 1503 |
| MalI | GATC | 7 cut(s) | 444, 597, 882, 1047, 1436, 1494, 1581 |
| MboI | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| MboII | GAAGA | 4 cut(s) | 300, 428, 1250, 1346 |
| MfeI | CAATTG | 2 cut(s) | 1058, 1200 |
| MlyI | GAGTC | 2 cut(s) | 930, 948 |
| MmeI | TCCRAC | 1 cut(s) | 808 |
| MnlI | CCTC | 9 cut(s) | 244, 325, 328, 445, 630, 688, 1130, 1219, 1435 |
| Mph1103I | ATGCAT | 1 cut(s) | 795 |
| MroXI | GAANNNNTTC | 1 cut(s) | 654 |
| MseI | TTAA | 2 cut(s) | 591, 744 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1514 |
| MspA1I | CMGCKG | 1 cut(s) | 247 |
| MspR9I | CCNGG | 2 cut(s) | 865, 1274 |
| MunI | CAATTG | 2 cut(s) | 1058, 1200 |
| Mva1269I | GAATGC | 3 cut(s) | 73, 94, 584 |
| MvaI | CCWGG | 2 cut(s) | 865, 1274 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 53, 785, 898, 1226, 1541, 1607 |
| NdeII | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| NlaIV | GGNNCC | 1 cut(s) | 1525 |
| NmeAIII | GCCGAG | 1 cut(s) | 1205 |
| NmuCI | GTSAC | 2 cut(s) | 1334, 1503 |
| NsiI | ATGCAT | 1 cut(s) | 795 |
| NspI | RCATGY | 5 cut(s) | 429, 589, 1199, 1517, 1596 |
| OliI | CACNNNNGTG | 1 cut(s) | 1514 |
| PagI | TCATGA | 1 cut(s) | 598 |
| PceI | AGGCCT | 1 cut(s) | 378 |
| PciI | ACATGT | 3 cut(s) | 425, 1513, 1592 |
| PciSI | GCTCTTC | 1 cut(s) | 1359 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 473 |
| PctI | GAATGC | 3 cut(s) | 73, 94, 584 |
| PdmI | GAANNNNTTC | 1 cut(s) | 654 |
| PfeI | GAWTC | 3 cut(s) | 371, 568, 1483 |
| Pfl23II | CGTACG | 1 cut(s) | 147 |
| PfoI | TCCNGGA | 1 cut(s) | 1272 |
| PkrI | GCNGC | 5 cut(s) | 1021, 1351, 1402, 1405, 1534 |
| PleI | GAGTC | 2 cut(s) | 929, 947 |
| PpsI | GAGTC | 2 cut(s) | 929, 947 |
| Ppu21I | YACGTR | 1 cut(s) | 610 |
| PpuMI | RGGWCCY | 1 cut(s) | 1276 |
| PscI | ACATGT | 3 cut(s) | 425, 1513, 1592 |
| PshBI | ATTAAT | 1 cut(s) | 744 |
| Psp5II | RGGWCCY | 1 cut(s) | 1276 |
| Psp6I | CCWGG | 2 cut(s) | 863, 1272 |
| PspFI | CCCAGC | 1 cut(s) | 750 |
| PspGI | CCWGG | 2 cut(s) | 863, 1272 |
| PspLI | CGTACG | 1 cut(s) | 147 |
| PspN4I | GGNNCC | 1 cut(s) | 1525 |
| PspPI | GGNCC | 2 cut(s) | 890, 1276 |
| PspPPI | RGGWCCY | 1 cut(s) | 1276 |
| PvuII | CAGCTG | 1 cut(s) | 247 |
| RsaI | GTAC | 9 cut(s) | 6, 149, 549, 612, 1164, 1525, 1597, 1615, 1637 |
| RsaNI | GTAC | 9 cut(s) | 5, 148, 548, 611, 1163, 1524, 1596, 1614, 1636 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1514 |
| SapI | GCTCTTC | 1 cut(s) | 1359 |
| SaqAI | TTAA | 2 cut(s) | 591, 744 |
| SatI | GCNGC | 5 cut(s) | 1020, 1350, 1401, 1404, 1533 |
| Sau3AI | GATC | 7 cut(s) | 442, 595, 880, 1045, 1434, 1492, 1579 |
| Sau96I | GGNCC | 2 cut(s) | 890, 1276 |
| ScaI | AGTACT | 1 cut(s) | 1164 |
| SchI | GAGTC | 2 cut(s) | 930, 948 |
| ScrFI | CCNGG | 2 cut(s) | 865, 1274 |
| SfaNI | GCATC | 4 cut(s) | 459, 634, 1238, 1630 |
| SinI | GGWCC | 1 cut(s) | 1276 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1514 |
| SmlI | CTYRAG | 3 cut(s) | 8, 325, 679 |
| SmoI | CTYRAG | 3 cut(s) | 8, 325, 679 |
| SseBI | AGGCCT | 1 cut(s) | 378 |
| SsiI | CCGC | 1 cut(s) | 647 |
| SspI | AATATT | 1 cut(s) | 1386 |
| SspMI | CTAG | 5 cut(s) | 315, 507, 855, 1520, 1602 |
| StuI | AGGCCT | 1 cut(s) | 378 |
| StyD4I | CCNGG | 2 cut(s) | 863, 1272 |
| TaaI | ACNGT | 2 cut(s) | 394, 409 |
| TaiI | ACGT | 2 cut(s) | 612, 1317 |
| TaqI | TCGA | 3 cut(s) | 207, 367, 1488 |
| TatI | WGTACW | 3 cut(s) | 1162, 1595, 1635 |
| TfiI | GAWTC | 3 cut(s) | 371, 568, 1483 |
| Tru1I | TTAA | 2 cut(s) | 591, 744 |
| Tru9I | TTAA | 2 cut(s) | 591, 744 |
| TscAI | CASTG | 2 cut(s) | 316, 414 |
| TseFI | GTSAC | 2 cut(s) | 1334, 1503 |
| TseI | GCWGC | 5 cut(s) | 1019, 1349, 1400, 1403, 1532 |
| Tsp45I | GTSAC | 2 cut(s) | 1334, 1503 |
| TspRI | CASTG | 2 cut(s) | 316, 414 |
| VpaK11BI | GGWCC | 1 cut(s) | 1276 |
| VspI | ATTAAT | 1 cut(s) | 744 |
| XapI | RAATTY | 6 cut(s) | 363, 653, 670, 694, 831, 1032 |
| XceI | RCATGY | 5 cut(s) | 429, 589, 1199, 1517, 1596 |
| XmiI | GTMKAC | 1 cut(s) | 339 |
| XmnI | GAANNNNTTC | 1 cut(s) | 654 |
| XspI | CTAG | 5 cut(s) | 315, 507, 855, 1520, 1602 |
| ZraI | GACGTC | 1 cut(s) | 1315 |
| ZrmI | AGTACT | 1 cut(s) | 1164 |
| Zsp2I | ATGCAT | 1 cut(s) | 795 |