RchiOBHm_Chr5g0029671

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
23278535 .. 23279006
472 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30904

Sequence Viewer

Length: 126 bp
ATGCAACTGCAAACACGAACACTGAATATAGCCTTCTGTTACTTACCAACTTGCTTCTCAATGGACAGAACAATATGCAAAACGTCGGTAGTAATCAGGGACCAATTCATCTGTATATATAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

41

Amino Acids

4.82

Weight (kDa)

8.49

Isoelectric Point (pI)

27.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 1 cut(s) 123
AluI AGCT 1 cut(s) 123
AspS9I GGNCC 1 cut(s) 100
AvaII GGWCC 1 cut(s) 100
Bme18I GGWCC 1 cut(s) 100
BmgT120I GGNCC 1 cut(s) 100
BmiI GGNNCC 1 cut(s) 101
BslFI GGGAC 1 cut(s) 113
BsmFI GGGAC 1 cut(s) 113
BspLI GGNNCC 1 cut(s) 101
BtsIMutI CAGTG 1 cut(s) 20
Cfr13I GGNCC 1 cut(s) 100
CviJI RGCY 2 cut(s) 32, 123
CviKI_1 RGCY 2 cut(s) 32, 123
Eco47I GGWCC 1 cut(s) 100
FaiI YATR 5 cut(s) 29, 76, 116, 118, 120
FaqI GGGAC 1 cut(s) 113
FspEI CC 7 cut(s) 46, 47, 60, 71, 82, 83, 116
Hpy99I CGWCG 1 cut(s) 88
HpyAV CCTTC 1 cut(s) 43
HpyCH4IV ACGT 1 cut(s) 83
HpyCH4V TGCA 3 cut(s) 4, 10, 78
HpySE526I ACGT 1 cut(s) 83
LpnPI CCDG 1 cut(s) 82
MaeII ACGT 1 cut(s) 83
MaeIII GTNAC 1 cut(s) 38
MluCI AATT 1 cut(s) 104
NlaIV GGNNCC 1 cut(s) 101
PspN4I GGNNCC 1 cut(s) 101
PspPI GGNCC 1 cut(s) 100
Sau96I GGNCC 1 cut(s) 100
SetI ASST 2 cut(s) 86, 125
SgeI CNNG 3 cut(s) 27, 63, 109
SinI GGWCC 1 cut(s) 100
Sse9I AATT 1 cut(s) 104
TaiI ACGT 1 cut(s) 86
TasI AATT 1 cut(s) 104
TscAI CASTG 1 cut(s) 27
TspDTI ATGAA 1 cut(s) 97
TspRI CASTG 1 cut(s) 27
VpaK11BI GGWCC 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.