No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g30941 FvH4_5g02451 FvH4_5g17361 FvH4_5g17362 |
| rosa_chinensis | RchiOBHm_Chr1g0383661 RchiOBHm_Chr4g0407001 RchiOBHm_Chr5g0029671 |
| rosa_multiflora | Rmu_sc0000665.1_g000017 Rmu_sc0011574.1_g000005 Rmu_sc0011574.1_g000006 Rmu_ssc0000135.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00256940 Rroxscaffold_4G00289440 Rroxscaffold_7G00179290 |
| rosa_rugosa | Rorug04G0076400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 100 |
| AcsI | RAATTY | 3 cut(s) | 24, 111, 325 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 100 |
| AgeI | ACCGGT | 1 cut(s) | 97 |
| AgsI | TTSAA | 2 cut(s) | 142, 304 |
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| Alw26I | GTCTC | 3 cut(s) | 11, 77, 111 |
| ApoI | RAATTY | 3 cut(s) | 24, 111, 325 |
| AsiGI | ACCGGT | 1 cut(s) | 97 |
| AsuHPI | GGTGA | 1 cut(s) | 329 |
| BciVI | GTATCC | 1 cut(s) | 234 |
| BcoDI | GTCTC | 3 cut(s) | 11, 77, 111 |
| BfuI | GTATCC | 1 cut(s) | 234 |
| Bsa29I | ATCGAT | 1 cut(s) | 202 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 279 |
| BsaWI | WCCGGW | 1 cut(s) | 97 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 100 |
| Bse118I | RCCGGY | 1 cut(s) | 97 |
| BseCI | ATCGAT | 1 cut(s) | 202 |
| BseDI | CCNNGG | 1 cut(s) | 279 |
| BseGI | GGATG | 1 cut(s) | 49 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BshTI | ACCGGT | 1 cut(s) | 97 |
| BshVI | ATCGAT | 1 cut(s) | 202 |
| BsiSI | CCGG | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 100 |
| BsmAI | GTCTC | 3 cut(s) | 11, 77, 111 |
| BsmI | GAATGC | 1 cut(s) | 262 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| Bsp19I | CCATGG | 1 cut(s) | 279 |
| BspDI | ATCGAT | 1 cut(s) | 202 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BsrFI | RCCGGY | 1 cut(s) | 97 |
| BssAI | RCCGGY | 1 cut(s) | 97 |
| BssECI | CCNNGG | 1 cut(s) | 279 |
| BssT1I | CCWWGG | 1 cut(s) | 279 |
| Bst4CI | ACNGT | 1 cut(s) | 187 |
| Bst6I | CTCTTC | 2 cut(s) | 56, 315 |
| BstDSI | CCRYGG | 1 cut(s) | 279 |
| BstEII | GGTNACC | 1 cut(s) | 283 |
| BstF5I | GGATG | 1 cut(s) | 49 |
| BstMAI | GTCTC | 3 cut(s) | 11, 77, 111 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 163 |
| BstPI | GGTNACC | 1 cut(s) | 283 |
| Bsu15I | ATCGAT | 1 cut(s) | 202 |
| BsuI | GTATCC | 1 cut(s) | 234 |
| BsuTUI | ATCGAT | 1 cut(s) | 202 |
| BtgI | CCRYGG | 1 cut(s) | 279 |
| BtgZI | GCGATG | 1 cut(s) | 68 |
| BtsCI | GGATG | 1 cut(s) | 49 |
| Cfr10I | RCCGGY | 1 cut(s) | 97 |
| ClaI | ATCGAT | 1 cut(s) | 202 |
| CspAI | ACCGGT | 1 cut(s) | 97 |
| CviAII | CATG | 1 cut(s) | 280 |
| CviJI | RGCY | 4 cut(s) | 92, 166, 192, 297 |
| CviKI_1 | RGCY | 4 cut(s) | 92, 166, 192, 297 |
| Eam1104I | CTCTTC | 2 cut(s) | 56, 315 |
| EarI | CTCTTC | 2 cut(s) | 56, 315 |
| Eco130I | CCWWGG | 1 cut(s) | 279 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| Eco91I | GGTNACC | 1 cut(s) | 283 |
| EcoO65I | GGTNACC | 1 cut(s) | 283 |
| EcoT14I | CCWWGG | 1 cut(s) | 279 |
| EcoT22I | ATGCAT | 1 cut(s) | 176 |
| ErhI | CCWWGG | 1 cut(s) | 279 |
| FaeI | CATG | 1 cut(s) | 283 |
| FaiI | YATR | 4 cut(s) | 147, 247, 249, 281 |
| FatI | CATG | 1 cut(s) | 279 |
| FokI | GGATG | 1 cut(s) | 56 |
| HapII | CCGG | 1 cut(s) | 98 |
| Hin1II | CATG | 1 cut(s) | 283 |
| HinfI | GANTC | 4 cut(s) | 70, 84, 104, 272 |
| HpaII | CCGG | 1 cut(s) | 98 |
| HphI | GGTGA | 1 cut(s) | 329 |
| Hpy188I | TCNGA | 1 cut(s) | 83 |
| Hpy188III | TCNNGA | 2 cut(s) | 116, 301 |
| HpyCH4III | ACNGT | 1 cut(s) | 187 |
| HpyCH4V | TGCA | 2 cut(s) | 174, 210 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 163 |
| Hsp92II | CATG | 1 cut(s) | 283 |
| LmnI | GCTCC | 1 cut(s) | 171 |
| LpnPI | CCDG | 1 cut(s) | 111 |
| MaeIII | GTNAC | 2 cut(s) | 5, 283 |
| MboII | GAAGA | 3 cut(s) | 70, 73, 332 |
| MluCI | AATT | 4 cut(s) | 24, 111, 255, 325 |
| MlyI | GAGTC | 3 cut(s) | 79, 113, 266 |
| MmeI | TCCRAC | 1 cut(s) | 47 |
| Mph1103I | ATGCAT | 1 cut(s) | 176 |
| MseI | TTAA | 1 cut(s) | 258 |
| MspI | CCGG | 1 cut(s) | 98 |
| Mva1269I | GAATGC | 1 cut(s) | 262 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 163 |
| NcoI | CCATGG | 1 cut(s) | 279 |
| NlaIII | CATG | 1 cut(s) | 283 |
| NmuCI | GTSAC | 1 cut(s) | 5 |
| NsiI | ATGCAT | 1 cut(s) | 176 |
| PctI | GAATGC | 1 cut(s) | 262 |
| PfeI | GAWTC | 1 cut(s) | 84 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 100 |
| PinAI | ACCGGT | 1 cut(s) | 97 |
| PleI | GAGTC | 3 cut(s) | 78, 112, 266 |
| PpsI | GAGTC | 3 cut(s) | 78, 112, 266 |
| PspEI | GGTNACC | 1 cut(s) | 283 |
| SaqAI | TTAA | 1 cut(s) | 258 |
| SchI | GAGTC | 3 cut(s) | 79, 113, 266 |
| SetI | ASST | 1 cut(s) | 168 |
| Sse9I | AATT | 4 cut(s) | 24, 111, 255, 325 |
| SspI | AATATT | 1 cut(s) | 313 |
| StyI | CCWWGG | 1 cut(s) | 279 |
| TaaI | ACNGT | 1 cut(s) | 187 |
| TaqI | TCGA | 1 cut(s) | 202 |
| TasI | AATT | 4 cut(s) | 24, 111, 255, 325 |
| TfiI | GAWTC | 1 cut(s) | 84 |
| Tru1I | TTAA | 1 cut(s) | 258 |
| Tru9I | TTAA | 1 cut(s) | 258 |
| TseFI | GTSAC | 1 cut(s) | 5 |
| Tsp45I | GTSAC | 1 cut(s) | 5 |
| TspDTI | ATGAA | 1 cut(s) | 71 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 100 |
| XapI | RAATTY | 3 cut(s) | 24, 111, 325 |
| Zsp2I | ATGCAT | 1 cut(s) | 176 |