RchiOBHm_Chr4g0407001

2Fe-2S iron-sulfur cluster binding domain

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
29063407 .. 29065111
1705 bp
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UTR
Exon/CDS
Intron
PRQ37827

Sequence Viewer

Length: 393 bp
ATGGCCTTCTGTTACTTACCAACTTGCTTCTCAATGGACAGAACAATATGCAAAACGTCGGTAGTAATCAGGGACCAATTCATCTTTTATATAGGAGACTTAACCCTCAAGAAGCTTCCCATTAAAGCTATCCATATCAGTTTAGGAGCCTGTGAAGGTTCACTTGCCTGTTCAATATGTCATGTGATTTTAATGGACGTGGAATATTACAACAAATTAGAAGACCCAACTGATGAGGAAAATGATATGTTGGACTTGGCATTTGGACTTACAGAAACGTCTCGTCTGGGTTGCCAAGTCATTGCAAGCCCTGAACTTGATGGAGTTCGTTTAGCTATTCCTGCTGCCACCCGAAATTTTGCTGTTGATGGCTATGTACCAAAACCACACTAG

Protein Analysis

130

Amino Acids

14.41

Weight (kDa)

4.88

Isoelectric Point (pI)

40.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 355
AfaI GTAC 1 cut(s) 378
AgsI TTSAA 1 cut(s) 174
AjiI CACGTC 1 cut(s) 199
AluBI AGCT 3 cut(s) 115, 128, 335
AluI AGCT 3 cut(s) 115, 128, 335
Alw26I GTCTC 2 cut(s) 90, 285
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 344
ApoI RAATTY 1 cut(s) 355
ArsI GACNNNNNNTTYG 2 cut(s) 245, 277
AspS9I GGNCC 1 cut(s) 73
AvaII GGWCC 1 cut(s) 73
BbsI GAAGAC 1 cut(s) 228
BbvI GCAGC 1 cut(s) 331
BccI CCATC 2 cut(s) 314, 362
BcoDI GTCTC 2 cut(s) 90, 285
BfaI CTAG 1 cut(s) 391
BisI GCNGC 1 cut(s) 345
BlsI GCNGC 1 cut(s) 346
Bme18I GGWCC 1 cut(s) 73
BmgBI CACGTC 1 cut(s) 199
BmgT120I GGNCC 1 cut(s) 73
BmiI GGNNCC 2 cut(s) 74, 148
BpiI GAAGAC 1 cut(s) 228
BpuEI CTTGAG 1 cut(s) 92
Bse3DI GCAATG 1 cut(s) 300
BseMI GCAATG 1 cut(s) 300
BseXI GCAGC 1 cut(s) 331
BshFI GGCC 1 cut(s) 5
BslFI GGGAC 1 cut(s) 86
BsmAI GTCTC 2 cut(s) 90, 285
BsmBI CGTCTC 1 cut(s) 285
BsmFI GGGAC 1 cut(s) 86
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspLI GGNNCC 2 cut(s) 74, 148
BsrDI GCAATG 1 cut(s) 300
BstC8I GCNNGC 1 cut(s) 307
BstMAI GTCTC 2 cut(s) 90, 285
BstMWI GCNNNNNNNGC 1 cut(s) 341
BstV1I GCAGC 1 cut(s) 331
BstV2I GAAGAC 1 cut(s) 228
BsuRI GGCC 1 cut(s) 5
BtrI CACGTC 1 cut(s) 199
Cac8I GCNNGC 1 cut(s) 307
Cfr13I GGNCC 1 cut(s) 73
Csp6I GTAC 1 cut(s) 377
CviAII CATG 1 cut(s) 182
CviJI RGCY 7 cut(s) 5, 115, 128, 149, 309, 335, 372
CviKI_1 RGCY 7 cut(s) 5, 115, 128, 149, 309, 335, 372
CviQI GTAC 1 cut(s) 377
Eco47I GGWCC 1 cut(s) 73
Esp3I CGTCTC 1 cut(s) 285
FaeI CATG 1 cut(s) 185
FaiI YATR 8 cut(s) 49, 90, 92, 135, 178, 183, 248, 375
FalI AAGNNNNNCTT 2 cut(s) 147, 179
FaqI GGGAC 1 cut(s) 86
FatI CATG 1 cut(s) 181
Fnu4HI GCNGC 1 cut(s) 345
Fsp4HI GCNGC 1 cut(s) 345
FspBI CTAG 1 cut(s) 391
GluI GCNGC 1 cut(s) 345
HaeIII GGCC 1 cut(s) 5
Hin1II CATG 1 cut(s) 185
HindIII AAGCTT 1 cut(s) 113
Hpy166II GTNNAC 1 cut(s) 161
Hpy188III TCNNGA 1 cut(s) 109
Hpy8I GTNNAC 1 cut(s) 161
Hpy99I CGWCG 1 cut(s) 61
HpyAV CCTTC 2 cut(s) 16, 149
HpyCH4IV ACGT 3 cut(s) 56, 198, 278
HpyCH4V TGCA 2 cut(s) 51, 305
HpyF10VI GCNNNNNNNGC 1 cut(s) 341
HpySE526I ACGT 3 cut(s) 56, 198, 278
Hsp92II CATG 1 cut(s) 185
LmnI GCTCC 1 cut(s) 146
LpnPI CCDG 6 cut(s) 55, 163, 181, 272, 324, 354
Lsp1109I GCAGC 1 cut(s) 331
MaeI CTAG 1 cut(s) 391
MaeII ACGT 3 cut(s) 56, 198, 278
MaeIII GTNAC 1 cut(s) 11
MboII GAAGA 1 cut(s) 233
MluCI AATT 3 cut(s) 77, 215, 355
MmeI TCCRAC 1 cut(s) 231
MnlI CCTC 2 cut(s) 116, 229
MseI TTAA 3 cut(s) 101, 123, 191
MwoI GCNNNNNNNGC 1 cut(s) 341
NlaIII CATG 1 cut(s) 185
NlaIV GGNNCC 2 cut(s) 74, 148
PkrI GCNGC 1 cut(s) 346
PspN4I GGNNCC 2 cut(s) 74, 148
PspPI GGNCC 1 cut(s) 73
RsaI GTAC 1 cut(s) 378
RsaNI GTAC 1 cut(s) 377
SaqAI TTAA 3 cut(s) 101, 123, 191
SatI GCNGC 1 cut(s) 345
Sau96I GGNCC 1 cut(s) 73
SetI ASST 7 cut(s) 59, 117, 130, 160, 201, 281, 337
SinI GGWCC 1 cut(s) 73
SmlI CTYRAG 1 cut(s) 107
SmoI CTYRAG 1 cut(s) 107
Sse9I AATT 3 cut(s) 77, 215, 355
SspI AATATT 1 cut(s) 206
SspMI CTAG 1 cut(s) 391
TaiI ACGT 3 cut(s) 59, 201, 281
TasI AATT 3 cut(s) 77, 215, 355
Tru1I TTAA 3 cut(s) 101, 123, 191
Tru9I TTAA 3 cut(s) 101, 123, 191
TseI GCWGC 1 cut(s) 344
TspDTI ATGAA 1 cut(s) 70
VpaK11BI GGWCC 1 cut(s) 73
XapI RAATTY 1 cut(s) 355
XspI CTAG 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.