Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0007976

Physical Location & Seq

Genomic Coordinates Reverse (-)

17241697 .. 17245856

Gene Structure 4160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g25750.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGAGACGATCCGTGATCTTCCTTCTCCTATTCGCTCCCCTCATCAGCTCTTTCGTCTCCGCCGATGACACCTCCCTCGCCAATCCCGACTCCGGCGGCGCCGCTCTTCAGCTCTTCAGCTCTCTCCTCCCGCCTGCACTGAATAATGGGGCGCTTCTAGTCACATTGGACGGGAAGGTGGTTTCGGTGAACCCGAAGACGATGGAGATCGAATGGGCCTTGTCCTCCGGTCCCCGGATTCATTCTTCCTATCGAAACGTTTCGTATTTCGACAACTGCAGGAGTGATGATCACTTTTTCGTTGACATTGGTGAAGACTGGGCGCTGTATCGTCACAGCAACAGCAAGGGGAAAAAGAAACTAGCGTCGAGTATTAGAGAGTATGTGGCGAGTACTCCGGTAGTTTCGGAGGATGGAGGAGTCACGTTGGGGTCGAAGAAGACTACTGTGTTTGCTGTTAATGCGGTGACCGGAGAAGTGATTCGTAGTTTTAGGTTGGGTGTTGATACTGCTTCCGCTAGTTTGGGTGTGGAACGCACTGGTGTTGAGGGCTTGGAAACATCTGGATTGGTGGTGCTTTATCTTGAGAGAACAGATTACATGCTGCAGCATTGTACAGCCGAGGGCAATCTTTTGTGGAAATTGGAAACTGCAGAGTTTGATGCTGATTTTCGATATCCTAAAATTGGAAATGGGCTTGGTCTAGAGAACAGGCTCATTGCTAACTCAACAGTGCCTTATCTGAAGAAGAAGCCCCTTGTCATCCGGGTTCCTTATCCTAGCTCGGTGGAATCTCGTTCTGTAATTGAGGGTCTAACTGGTGGGTATAATGGAGGCAAACCTCTCCCTCTGGAAGGTCCTCAGGACAATCTTCTGGCTCTGCCTTTTGAGAAAGGTCGTGTACCTCCTCACAACATCGAAGGCAAAGAAATGCTTGCTTTGCCGTCTCTTGAACTTGTGGACTCTAGGATCTTGGCTCTACCTGGTAGAGATGTTGGTAAACTGGACGTGAAAAGCTCAATGGTTGAATCTGTTACTAACTTCCCCATACAATCTCTTTTGGTATTATTTCTCACCCTGTTATCCATTCTGGGATACATCTTCCGCTCTCTGACTGGAAAACAACGTAAATTGAAAGTGGTGTCTGAGGATACAAAAGCGCAAGCAGTGGCTCCCAAAAAGAAGAAAGCTCGAAGATTGGGAAATAATAAGAAGAATAACAGTTATGAGAAAGATGCCGGAAATTTTTCGGATGGATATGGTGAATCTAATAGACCCGCACATGAAACAAAATTGCTCTTGTCGTCTTCTGATTTTGTTGATCGTGAGACTGAGGGACGTAGGATTGGCAAGTTACTTGTTTCCAGTAACGAAATTGCTAAGGGGAGTAACGGTACCATTGTTCTTGAGGGAATCTATGATGGTCGTCCCGTAGCTGTTAAACGCCTCGTGCGAACTCACCATGATGTGGCTTTGAAAGAGATTCAGAATCTTATTGCATCTGATCAGCATCCAAATATTGTTCGTTGGTATGGCGTGGAGCATGATCAAGATTTTGTTTATCTATCCTTGGAGCGTTGCTCATGTAGCTTGAATGACTTGATTTATTATTACTCGGAGTCAATTCAAGGCCAAATTATCAACAAGGACGAGGATCCTCACTATTTGGCCGAGTATCGCATTCAATTGCAGGCGATCATGGGAAAGAACAAGAATGTTGAATTGTGGAAGACAAATGGATACCCTTCACCCCAGATGCTAAAACTAATGAGTGATCTTGTTTCTGGACTTGCCCATTTGCATGAACTTGGAATTATACATCGGGATCTAAAACCTCAGAATGTTTTGATAATCAAGGGCAGATCGTTACGCGCTAAGCTTTCAGATATGGGTATCAGCAAACGCCTTCAAGGGGACAAGTCTTCCATTACCCAGCATGCTACTGGTTATGGGAGTTCAGGTTGGCAAGCACCCGAACAACTTCTTCATCAGCGGCAGACTCGTGCAGTAGATTTATTTAGTTTAGGTTGTCTCCTCTTTTTCTGTCTCACTGGGGGTAGACACCCTTATGGGGATAGTATCGAGCGTGATGTGAATATAGTGAACGATCGGAAAGACCTATTCTTGGTAGAGAATATACCAGAAGCAGTGGATCTTTTTACTCATCTATTGAATCCCAACCCTGACATGAGGCCAACAGCCGTGGATGTGTTGCATCATCCCTTTTTCTGGAATTCTGAGACGAGACTTTCATTTCTGCGTGATGCTAGTGATCGAGTTGAATTGGAGGATAGAGAGACTGCATCTCAACTCTTAAGTTCATTAGAAAGTACTGCATCAGTTGCTCTAAATGGAAAGTGGGATGAAAAGATGGAGCCTGCATTCCTCAATAACATTGGTCGCTACAGGCGTTACAAGTTTGACAGCATCCGTGACTTGCTGCGTGTAACAAGGAACAAGTTAAATCACTACAGAGAACTTCCCCAAGAAATCCAGGAATTATTGGGGACAGTTCCTGAGGGCTTCGACAGTTATTTTTCAAGTCGATTTCCGAAATTATTAATCGAGGTGTATAAAGTGTTGTACAAGTACTGCAAAGAGGAGGAATTTTTTCGCAAGTATATAAAAGGTAATCCGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006983 GO:0006984 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010467 GO:0010506 GO:0010508 GO:0012505 GO:0014070 GO:0016020 GO:0016070 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031984 GO:0033554 GO:0034263 GO:0034641 GO:0034976 GO:0035966 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071216 GO:0071704 GO:0090304 GO:0098542 GO:0098827 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04140 ko04141 ko04210 ko04932 ko05010 map04140 map04141 map04210 map04932 map05010

Pfam Domains

Protein Families

PQQ Pkinase Ribonuc_2-5A

Protein Analysis

881

Amino Acids

98.63

Weight (kDa)

8.18

Isoelectric Point (pI)

39.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	456 - 737	8.1e-27	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	457 - 743	1.8e-37	Protein kinase domain
Ribonuc_2-5A	PF06479	749 - 874	1.6e-45	Ribonuclease 2-5A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24360 AT5G24360 AT5G24360
fragaria_vesca	FvH4_5g25750 FvH4_5g25750
malus_domestica	MD06G1007000.v1.1
prunus_persica	Prupe.5G008100_v2.0.a1 Prupe.5G008100_v2.0.a1 Prupe.5G008100_v2.0.a1
pyrus_communis	pycom02g08890 pycom06g00610
rosa_chinensis	RchiOBHm_Chr7g0216101
rosa_laevigata	RLG00000002594
rosa_multiflora	Rmu_co8312507.1_g000001 Rmu_sc0009767.1_g000002
rosa_roxburghii	Rroxscaffold_3G00243650
rosa_rugosa	Rorug07G0158900 Rorug07G0158900
rosa_samantha	Rh7AG295900 Rh7AG296000 Rh7BG288300 Rh7CG316300 Rh7DG298800
rosa_wichuraiana	Rw7G025170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1394
AccB1I	GGYRCC	2 cut(s)	98, 1394
AccB7I	CCANNNNNTGG	1 cut(s)	1468
AccBSI	CCGCTC	2 cut(s)	104, 1107
AccI	GTMKAC	1 cut(s)	2059
AccII	CGCG	1 cut(s)	1872
AciI	CCGC	9 cut(s)	60, 96, 102, 131, 464, 516, 1105, 1278, 1993
AclI	AACGTT	1 cut(s)	258
AclWI	GGATC	6 cut(s)	3, 977, 1649, 1662, 1833, 2160
AcoI	YGGCCR	1 cut(s)	1668
AcsI	RAATTY	3 cut(s)	1243, 2233, 2606
AcuI	CTGAAG	3 cut(s)	92, 100, 764
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	7 cut(s)	394, 616, 903, 1396, 2332, 2585, 2591
AfiI	CCNNNNNNNGG	9 cut(s)	92, 234, 686, 854, 1468, 1912, 2071, 2125, 2229
AflII	CTTAAG	1 cut(s)	2314
AjiI	CACGTC	1 cut(s)	1009
AjnI	CCWGG	2 cut(s)	982, 2493
AluBI	AGCT	9 cut(s)	48, 112, 120, 783, 1017, 1190, 1436, 1590, 1879
AluI	AGCT	9 cut(s)	48, 112, 120, 783, 1017, 1190, 1436, 1590, 1879
Alw26I	GTCTC	8 cut(s)	61, 951, 1322, 2036, 2051, 2234, 2239, 2291
AlwI	GGATC	6 cut(s)	3, 977, 1649, 1662, 1833, 2160
AlwNI	CAGNNNCTG	1 cut(s)	2516
AoxI	GGCC	4 cut(s)	216, 1630, 1668, 2192
ApeKI	GCWGC	3 cut(s)	604, 607, 2440
ApoI	RAATTY	3 cut(s)	1243, 2233, 2606
AseI	ATTAAT	1 cut(s)	2561
Asp700I	GAANNNNTTC	5 cut(s)	259, 480, 1246, 1980, 2610
Asp718I	GGTACC	1 cut(s)	1394
AspLEI	GCGC	5 cut(s)	101, 154, 325, 1162, 1874
AspS9I	GGNCC	3 cut(s)	216, 230, 857
AsuC2I	CCSGG	2 cut(s)	235, 767
AsuHPI	GGTGA	7 cut(s)	199, 323, 478, 1066, 1274, 1451, 1740
AvaII	GGWCC	2 cut(s)	230, 857
AxyI	CCTNAGG	2 cut(s)	861, 2517
BaeI	ACNNNNGTAYC	2 cut(s)	1386, 1419
BamHI	GGATCC	1 cut(s)	1654
BanI	GGYRCC	2 cut(s)	98, 1394
BauI	CACGAG	2 cut(s)	1448, 2001
BbsI	GAAGAC	6 cut(s)	203, 321, 446, 1299, 1736, 1914
BbvI	GCAGC	3 cut(s)	591, 619, 2427
BccI	CCATC	5 cut(s)	196, 407, 1247, 1415, 2365
BceAI	ACGGC	2 cut(s)	928, 2186
BciT130I	CCWGG	2 cut(s)	984, 2495
BciVI	GTATCC	3 cut(s)	1088, 1144, 1733
BclI	TGATCA	3 cut(s)	289, 1504, 1546
BcnI	CCSGG	2 cut(s)	235, 767
BcoDI	GTCTC	8 cut(s)	61, 951, 1322, 2036, 2051, 2234, 2239, 2291
BfaI	CTAG	7 cut(s)	158, 362, 519, 704, 780, 966, 2268
BfmI	CTRYAG	5 cut(s)	277, 605, 651, 2404, 2470
BfoI	RGCGCY	3 cut(s)	102, 155, 326
BfrI	CTTAAG	1 cut(s)	2314
BfuI	GTATCC	3 cut(s)	1088, 1144, 1733
BisI	GCNGC	6 cut(s)	97, 102, 605, 608, 1994, 2441
BlpI	GCTNAGC	1 cut(s)	1875
BlsI	GCNGC	6 cut(s)	98, 103, 606, 609, 1995, 2442
BmcAI	AGTACT	3 cut(s)	394, 2332, 2591
Bme1390I	CCNGG	4 cut(s)	235, 767, 984, 2495
Bme18I	GGWCC	2 cut(s)	230, 857
BmgBI	CACGTC	1 cut(s)	1009
BmgT120I	GGNCC	3 cut(s)	216, 230, 857
BmiI	GGNNCC	7 cut(s)	100, 232, 771, 1173, 1396, 1656, 2376
BmrFI	CCNGG	4 cut(s)	235, 767, 984, 2495
BmrI	ACTGGG	2 cut(s)	328, 2061
BmuI	ACTGGG	2 cut(s)	328, 2061
BpiI	GAAGAC	6 cut(s)	203, 321, 446, 1299, 1736, 1914
BplI	GAGNNNNNCTC	2 cut(s)	1565, 1597
Bpu10I	CCTNAGC	1 cut(s)	1380
Bpu1102I	GCTNAGC	1 cut(s)	1875
BpuEI	CTTGAG	2 cut(s)	605, 1427
BpuMI	CCSGG	2 cut(s)	235, 767
BsaBI	GATNNNNATC	2 cut(s)	206, 1509
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	4 cut(s)	233, 621, 1569, 2202
BsaWI	WCCGGW	4 cut(s)	227, 397, 470, 2635
BsaXI	ACNNNNNCTCC	4 cut(s)	1378, 1408, 1945, 1975
Bsc4I	CCNNNNNNNGG	9 cut(s)	92, 234, 686, 854, 1468, 1912, 2071, 2125, 2229
Bse1I	ACTGG	8 cut(s)	323, 544, 823, 1008, 1120, 1365, 1948, 2056
Bse21I	CCTNAGG	2 cut(s)	861, 2517
Bse3DI	GCAATG	1 cut(s)	717
Bse8I	GATNNNNATC	2 cut(s)	206, 1509
BseBI	CCWGG	2 cut(s)	984, 2495
BseDI	CCNNGG	4 cut(s)	233, 621, 1569, 2202
BseGI	GGATG	8 cut(s)	418, 762, 1258, 1510, 2212, 2218, 2368, 2427
BseJI	GATNNNNATC	2 cut(s)	206, 1509
BseLI	CCNNNNNNNGG	9 cut(s)	92, 234, 686, 854, 1468, 1912, 2071, 2125, 2229
BseMI	GCAATG	1 cut(s)	717
BseMII	CTCAG	6 cut(s)	875, 1137, 1323, 1850, 2229, 2508
BseNI	ACTGG	8 cut(s)	323, 544, 823, 1008, 1120, 1365, 1948, 2056
BseRI	GAGGAG	5 cut(s)	116, 432, 897, 2024, 2615
BseXI	GCAGC	3 cut(s)	591, 619, 2427
BseYI	CCCAGC	1 cut(s)	1932
BsgI	GTGCAG	2 cut(s)	120, 2025
Bsh1236I	CGCG	1 cut(s)	1872
Bsh1285I	CGRYCG	1 cut(s)	2110
BshFI	GGCC	4 cut(s)	218, 1632, 1670, 2194
BshNI	GGYRCC	2 cut(s)	98, 1394
BsiEI	CGRYCG	1 cut(s)	2110
BsiSI	CCGG	8 cut(s)	93, 228, 235, 398, 471, 766, 1239, 2636
BslFI	GGGAC	5 cut(s)	216, 1350, 1413, 1928, 2521
BslI	CCNNNNNNNGG	9 cut(s)	92, 234, 686, 854, 1468, 1912, 2071, 2125, 2229
BsmAI	GTCTC	8 cut(s)	61, 951, 1322, 2036, 2051, 2234, 2239, 2291
BsmBI	CGTCTC	3 cut(s)	61, 951, 2234
BsmFI	GGGAC	5 cut(s)	216, 1350, 1413, 1928, 2521
BsmI	GAATGC	2 cut(s)	1680, 2381
BsnI	GGCC	4 cut(s)	218, 1632, 1670, 2194
Bsp1407I	TGTACA	2 cut(s)	614, 2583
Bsp1720I	GCTNAGC	1 cut(s)	1875
BspACI	CCGC	9 cut(s)	60, 96, 102, 131, 464, 516, 1105, 1278, 1993
BspANI	GGCC	4 cut(s)	218, 1632, 1670, 2194
BspCNI	CTCAG	6 cut(s)	874, 1138, 1324, 1849, 2230, 2509
BspFNI	CGCG	1 cut(s)	1872
BspLI	GGNNCC	7 cut(s)	100, 232, 771, 1173, 1396, 1656, 2376
BspMAI	CTGCAG	3 cut(s)	281, 609, 655
BspPI	GGATC	6 cut(s)	3, 977, 1649, 1662, 1833, 2160
BspQI	GCTCTTC	2 cut(s)	111, 119
BspT107I	GGYRCC	2 cut(s)	98, 1394
BspTI	CTTAAG	1 cut(s)	2314
BsrBI	CCGCTC	2 cut(s)	104, 1107
BsrDI	GCAATG	1 cut(s)	717
BsrGI	TGTACA	2 cut(s)	614, 2583
BsrI	ACTGG	8 cut(s)	323, 544, 823, 1008, 1120, 1365, 1948, 2056
BssECI	CCNNGG	4 cut(s)	233, 621, 1569, 2202
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	2 cut(s)	1448, 2001
BssT1I	CCWWGG	1 cut(s)	1569
Bst2BI	CACGAG	2 cut(s)	1448, 2001
Bst2UI	CCWGG	2 cut(s)	984, 2495
Bst4CI	ACNGT	6 cut(s)	448, 733, 1223, 1394, 2512, 2531
Bst6I	CTCTTC	2 cut(s)	111, 119
BstACI	GRCGYC	1 cut(s)	99
BstAFI	CTTAAG	1 cut(s)	2314
BstAPI	GCANNNNNTGC	1 cut(s)	2342
BstAUI	TGTACA	2 cut(s)	614, 2583
BstC8I	GCNNGC	7 cut(s)	135, 936, 1164, 1692, 1938, 1968, 2379
BstDEI	CTNAG	8 cut(s)	861, 1146, 1332, 1380, 1836, 1875, 2238, 2517
BstDSI	CCRYGG	1 cut(s)	2202
BstEII	GGTNACC	1 cut(s)	466
BstENI	CCTNNNNNAGG	1 cut(s)	852
BstF5I	GGATG	8 cut(s)	418, 762, 1258, 1510, 2212, 2218, 2368, 2427
BstFNI	CGCG	1 cut(s)	1872
BstH2I	RGCGCY	3 cut(s)	102, 155, 326
BstHHI	GCGC	5 cut(s)	101, 154, 325, 1162, 1874
BstMAI	GTCTC	8 cut(s)	61, 951, 1322, 2036, 2051, 2234, 2239, 2291
BstMCI	CGRYCG	1 cut(s)	2110
BstMWI	GCNNNNNNNGC	4 cut(s)	461, 940, 1587, 2342
BstNI	CCWGG	2 cut(s)	984, 2495
BstNSI	RCATGY	2 cut(s)	604, 1940
BstPI	GGTNACC	1 cut(s)	466
BstSCI	CCNGG	4 cut(s)	233, 765, 982, 2493
BstSFI	CTRYAG	5 cut(s)	277, 605, 651, 2404, 2470
BstUI	CGCG	1 cut(s)	1872
BstV1I	GCAGC	3 cut(s)	591, 619, 2427
BstV2I	GAAGAC	6 cut(s)	203, 321, 446, 1299, 1736, 1914
BstX2I	RGATCY	4 cut(s)	969, 1654, 1825, 2152
BstYI	RGATCY	4 cut(s)	969, 1654, 1825, 2152
Bsu36I	CCTNAGG	2 cut(s)	861, 2517
BsuI	GTATCC	3 cut(s)	1088, 1144, 1733
BsuRI	GGCC	4 cut(s)	218, 1632, 1670, 2194
BtgI	CCRYGG	1 cut(s)	2202
BtrI	CACGTC	1 cut(s)	1009
BtsCI	GGATG	8 cut(s)	418, 762, 1258, 1510, 2212, 2218, 2368, 2427
BtsI	GCAGTG	2 cut(s)	1173, 2154
BtsIMutI	CAGTG	6 cut(s)	137, 537, 738, 1173, 2049, 2154
Cac8I	GCNNGC	7 cut(s)	135, 936, 1164, 1692, 1938, 1968, 2379
CaiI	CAGNNNCTG	1 cut(s)	2516
CfoI	GCGC	5 cut(s)	101, 154, 325, 1162, 1874
Cfr13I	GGNCC	3 cut(s)	216, 230, 857
CseI	GACGC	1 cut(s)	354
CsiI	ACCWGGT	1 cut(s)	982
Csp6I	GTAC	7 cut(s)	393, 615, 902, 1395, 2331, 2584, 2590
CspCI	CAANNNNNGTGG	2 cut(s)	2184, 2219
CviAII	CATG	9 cut(s)	601, 1283, 1463, 1544, 1584, 1699, 1802, 1937, 2188
CviQI	GTAC	7 cut(s)	393, 615, 902, 1395, 2331, 2584, 2590
DdeI	CTNAG	8 cut(s)	861, 1146, 1332, 1380, 1836, 1875, 2238, 2517
DinI	GGCGCC	1 cut(s)	100
EaeI	YGGCCR	1 cut(s)	1668
Eam1104I	CTCTTC	2 cut(s)	111, 119
EarI	CTCTTC	2 cut(s)	111, 119
EciI	GGCGGA	1 cut(s)	49
Eco130I	CCWWGG	1 cut(s)	1569
Eco32I	GATATC	1 cut(s)	677
Eco47I	GGWCC	2 cut(s)	230, 857
Eco57I	CTGAAG	3 cut(s)	92, 100, 764
Eco81I	CCTNAGG	2 cut(s)	861, 2517
Eco91I	GGTNACC	1 cut(s)	466
EcoNI	CCTNNNNNAGG	1 cut(s)	852
EcoO109I	RGGNCCY	1 cut(s)	857
EcoO65I	GGTNACC	1 cut(s)	466
EcoRI	GAATTC	1 cut(s)	2233
EcoRII	CCWGG	2 cut(s)	982, 2493
EcoRV	GATATC	1 cut(s)	677
EcoT14I	CCWWGG	1 cut(s)	1569
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	1 cut(s)	1569
Esp3I	CGTCTC	3 cut(s)	61, 951, 2234
FaeI	CATG	9 cut(s)	604, 1286, 1466, 1547, 1587, 1702, 1805, 1940, 2191
FalI	AAGNNNNNCTT	2 cut(s)	918, 950
FaqI	GGGAC	5 cut(s)	216, 1350, 1413, 1928, 2521
FatI	CATG	9 cut(s)	600, 1282, 1462, 1543, 1583, 1698, 1801, 1936, 2187
FauI	CCCGC	2 cut(s)	138, 1285
FbaI	TGATCA	3 cut(s)	289, 1504, 1546
FblI	GTMKAC	1 cut(s)	2059
Fnu4HI	GCNGC	6 cut(s)	97, 102, 605, 608, 1994, 2441
FokI	GGATG	8 cut(s)	425, 749, 1265, 1497, 2205, 2219, 2375, 2414
Fsp4HI	GCNGC	6 cut(s)	97, 102, 605, 608, 1994, 2441
FspBI	CTAG	7 cut(s)	158, 362, 519, 704, 780, 966, 2268
GlaI	GCGC	5 cut(s)	100, 153, 324, 1161, 1873
GluI	GCNGC	6 cut(s)	97, 102, 605, 608, 1994, 2441
GsaI	CCCAGC	1 cut(s)	1936
HaeII	RGCGCY	3 cut(s)	102, 155, 326
HaeIII	GGCC	4 cut(s)	218, 1632, 1670, 2194
HapII	CCGG	8 cut(s)	93, 228, 235, 398, 471, 766, 1239, 2636
HgaI	GACGC	1 cut(s)	354
HhaI	GCGC	5 cut(s)	101, 154, 325, 1162, 1874
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	9 cut(s)	604, 1286, 1466, 1547, 1587, 1702, 1805, 1940, 2191
Hin6I	GCGC	5 cut(s)	99, 152, 323, 1160, 1872
HinP1I	GCGC	5 cut(s)	99, 152, 323, 1160, 1872
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HindIII	AAGCTT	1 cut(s)	1877
HpaII	CCGG	8 cut(s)	93, 228, 235, 398, 471, 766, 1239, 2636
HphI	GGTGA	7 cut(s)	199, 323, 478, 1066, 1274, 1451, 1740
Hpy166II	GTNNAC	7 cut(s)	190, 304, 902, 961, 1001, 2060, 2104
Hpy8I	GTNNAC	7 cut(s)	190, 304, 902, 961, 1001, 2060, 2104
Hpy99I	CGWCG	1 cut(s)	370
HpyAV	CCTTC	6 cut(s)	32, 169, 848, 914, 1755, 1916
HpyCH4III	ACNGT	6 cut(s)	448, 733, 1223, 1394, 2512, 2531
HpyCH4IV	ACGT	5 cut(s)	258, 425, 1008, 1126, 1339
HpyF10VI	GCNNNNNNNGC	4 cut(s)	461, 940, 1587, 2342
HpyF3I	CTNAG	8 cut(s)	861, 1146, 1332, 1380, 1836, 1875, 2238, 2517
HpySE526I	ACGT	5 cut(s)	258, 425, 1008, 1126, 1339
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	9 cut(s)	604, 1286, 1466, 1547, 1587, 1702, 1805, 1940, 2191
HspAI	GCGC	5 cut(s)	99, 152, 323, 1160, 1872
KasI	GGCGCC	1 cut(s)	98
KpnI	GGTACC	1 cut(s)	1398
Ksp22I	TGATCA	3 cut(s)	289, 1504, 1546
LguI	GCTCTTC	2 cut(s)	111, 119
LmnI	GCTCC	5 cut(s)	40, 1177, 1540, 1573, 2374
Lsp1109I	GCAGC	3 cut(s)	591, 619, 2427
MabI	ACCWGGT	1 cut(s)	982
MaeI	CTAG	7 cut(s)	158, 362, 519, 704, 780, 966, 2268
MaeII	ACGT	5 cut(s)	258, 425, 1008, 1126, 1339
MbiI	CCGCTC	2 cut(s)	104, 1107
MfeI	CAATTG	1 cut(s)	1685
MflI	RGATCY	4 cut(s)	969, 1654, 1825, 2152
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	5 cut(s)	83, 429, 956, 1628, 1993
MroXI	GAANNNNTTC	5 cut(s)	259, 480, 1246, 1980, 2610
MseI	TTAA	5 cut(s)	459, 1440, 2315, 2462, 2561
MslI	CAYNNNNRTG	3 cut(s)	1464, 1800, 2067
MspA1I	CMGCKG	1 cut(s)	1993
MspCI	CTTAAG	1 cut(s)	2314
MspI	CCGG	8 cut(s)	93, 228, 235, 398, 471, 766, 1239, 2636
MspR9I	CCNGG	4 cut(s)	235, 767, 984, 2495
MunI	CAATTG	1 cut(s)	1685
Mva1269I	GAATGC	2 cut(s)	1680, 2381
MvaI	CCWGG	2 cut(s)	984, 2495
MvnI	CGCG	1 cut(s)	1872
MwoI	GCNNNNNNNGC	4 cut(s)	461, 940, 1587, 2342
NarI	GGCGCC	1 cut(s)	99
NciI	CCSGG	2 cut(s)	235, 767
NlaIII	CATG	9 cut(s)	604, 1286, 1466, 1547, 1587, 1702, 1805, 1940, 2191
NlaIV	GGNNCC	7 cut(s)	100, 232, 771, 1173, 1396, 1656, 2376
NmeAIII	GCCGAG	2 cut(s)	646, 1696
NmuCI	GTSAC	5 cut(s)	160, 332, 421, 466, 2432
NspI	RCATGY	2 cut(s)	604, 1940
PaeI	GCATGC	1 cut(s)	1940
PciSI	GCTCTTC	2 cut(s)	111, 119
PcsI	WCGNNNNNNNCGW	6 cut(s)	60, 84, 191, 431, 1450, 2407
PctI	GAATGC	2 cut(s)	1680, 2381
PdmI	GAANNNNTTC	5 cut(s)	259, 480, 1246, 1980, 2610
PfeI	GAWTC	9 cut(s)	238, 481, 791, 1028, 1265, 1413, 1483, 1489, 2173
PflMI	CCANNNNNTGG	1 cut(s)	1468
PfoI	TCCNGGA	1 cut(s)	2493
PkrI	GCNGC	6 cut(s)	98, 103, 606, 609, 1995, 2442
Ple19I	CGATCG	1 cut(s)	2110
PleI	GAGTC	5 cut(s)	83, 428, 956, 1627, 1993
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	5 cut(s)	83, 428, 956, 1627, 1993
PpuMI	RGGWCCY	1 cut(s)	857
PshBI	ATTAAT	1 cut(s)	2561
Psp1406I	AACGTT	1 cut(s)	258
Psp5II	RGGWCCY	1 cut(s)	857
Psp6I	CCWGG	2 cut(s)	982, 2493
PspEI	GGTNACC	1 cut(s)	466
PspFI	CCCAGC	1 cut(s)	1932
PspGI	CCWGG	2 cut(s)	982, 2493
PspN4I	GGNNCC	7 cut(s)	100, 232, 771, 1173, 1396, 1656, 2376
PspPI	GGNCC	3 cut(s)	216, 230, 857
PspPPI	RGGWCCY	1 cut(s)	857
PstI	CTGCAG	3 cut(s)	281, 609, 655
PstNI	CAGNNNCTG	1 cut(s)	2516
PsuI	RGATCY	4 cut(s)	969, 1654, 1825, 2152
PvuI	CGATCG	1 cut(s)	2110
RsaI	GTAC	7 cut(s)	394, 616, 903, 1396, 2332, 2585, 2591
RsaNI	GTAC	7 cut(s)	393, 615, 902, 1395, 2331, 2584, 2590
RseI	CAYNNNNRTG	3 cut(s)	1464, 1800, 2067
SapI	GCTCTTC	2 cut(s)	111, 119
SaqAI	TTAA	5 cut(s)	459, 1440, 2315, 2462, 2561
SatI	GCNGC	6 cut(s)	97, 102, 605, 608, 1994, 2441
Sau96I	GGNCC	3 cut(s)	216, 230, 857
ScaI	AGTACT	3 cut(s)	394, 2332, 2591
SchI	GAGTC	5 cut(s)	83, 429, 956, 1628, 1993
ScrFI	CCNGG	4 cut(s)	235, 767, 984, 2495
SexAI	ACCWGGT	1 cut(s)	982
SfcI	CTRYAG	5 cut(s)	277, 605, 651, 2404, 2470
SfoI	GGCGCC	1 cut(s)	100
SinI	GGWCC	2 cut(s)	230, 857
SmiMI	CAYNNNNRTG	3 cut(s)	1464, 1800, 2067
SmlI	CTYRAG	3 cut(s)	584, 1406, 2314
SmoI	CTYRAG	3 cut(s)	584, 1406, 2314
SphI	GCATGC	1 cut(s)	1940
SsiI	CCGC	9 cut(s)	60, 96, 102, 131, 464, 516, 1105, 1278, 1993
SspDI	GGCGCC	1 cut(s)	98
SspI	AATATT	1 cut(s)	1519
SspMI	CTAG	7 cut(s)	158, 362, 519, 704, 780, 966, 2268
StyD4I	CCNGG	4 cut(s)	233, 765, 982, 2493
StyI	CCWWGG	1 cut(s)	1569
TaaI	ACNGT	6 cut(s)	448, 733, 1223, 1394, 2512, 2531
TaiI	ACGT	5 cut(s)	261, 428, 1011, 1129, 1342
TatI	WGTACW	5 cut(s)	392, 614, 2330, 2583, 2589
TauI	GCSGC	3 cut(s)	99, 104, 1996
TfiI	GAWTC	9 cut(s)	238, 481, 791, 1028, 1265, 1413, 1483, 1489, 2173
Tru1I	TTAA	5 cut(s)	459, 1440, 2315, 2462, 2561
Tru9I	TTAA	5 cut(s)	459, 1440, 2315, 2462, 2561
TscAI	CASTG	6 cut(s)	144, 544, 738, 1173, 2056, 2154
TseFI	GTSAC	5 cut(s)	160, 332, 421, 466, 2432
TseI	GCWGC	3 cut(s)	604, 607, 2440
Tsp45I	GTSAC	5 cut(s)	160, 332, 421, 466, 2432
TspDTI	ATGAA	7 cut(s)	230, 1299, 1818, 1976, 2241, 2310, 2379
TspGWI	ACGGA	1 cut(s)	2420
TspRI	CASTG	6 cut(s)	144, 544, 738, 1173, 2056, 2154
Van91I	CCANNNNNTGG	1 cut(s)	1468
Vha464I	CTTAAG	1 cut(s)	2314
VpaK11BI	GGWCC	2 cut(s)	230, 857
VspI	ATTAAT	1 cut(s)	2561
XagI	CCTNNNNNAGG	1 cut(s)	852
XapI	RAATTY	3 cut(s)	1243, 2233, 2606
XbaI	TCTAGA	1 cut(s)	703
XceI	RCATGY	2 cut(s)	604, 1940
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1940
XmiI	GTMKAC	1 cut(s)	2059
XmnI	GAANNNNTTC	5 cut(s)	259, 480, 1246, 1980, 2610
XspI	CTAG	7 cut(s)	158, 362, 519, 704, 780, 966, 2268
ZrmI	AGTACT	3 cut(s)	394, 2332, 2591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.