Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0007976

Physical Location & Seq

Genomic Coordinates Reverse (-)

34067540 .. 34072095

Gene Structure 4556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG298800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGAGACGATCGGTGATCTTCCTTCTCCTGTTTGCTCCCTTGATCGGCTGTTTCGTCAAGTCTGGTTCAGCCGAGGAGACCTCCCTCGCCAACCCAGATTCCGCCGGCGGCGCTCTTCAGCTCTTCAGCTCTCTTCTGCCTCCTGCACTTAGGAATGATGCAGCGCTTTTGGTCACATTGGACGGCAAGGTTGTTTCTGTCAACCCCAAGACGATGGAGATTGAGTGGGCCTTGTCCTCTGGTTCCCGAATTCACTCTTCCTATCAGAACGTCTCTTATTTCAACAACTGCAGGAGTGATGATGATGATGATCACTCTTTCATTGATATTGGTGAAGACTGGGCCCTCTATCGTCACAGCAACACCAACAAGAAGAAGAAGAAACTGTCGTCGAGTATTAGAGAATATGTCGCAACTACTCCGCTAGTTTCCGAGGATGGAGGAGTCACATTGGGGTCAAAGATCACTAAAGTGTTTGCTGTTAATGCTGTGACCGGACAAGTAATACATAGTTTTAGGTTGGGTGATAATACTCCTTCAGCTACTTTAGGTATGGAACCCACCGGTGCCGAGGGGTTGGAAACATCTGGACTGGTGTTGTATCTCGAGAGAACAGATTACACACTGCAGCATTGCACAGTCAAGGGCGATCTTCTGTGGAAATTAGAAATTGCAGAGTTTGATGCTCACTTTCGATATCCTAAAATTGGAAATGGGCTTGGTCCAGGGGACAGGCTTATTGCTAACTCAACAGTGCCTTATCTGAAGGAGAAGCCTGTTGTCATTCGCGTTCCTTATCCTAATTCGGTGGAATCTCGTTCTGTAATTGACGGTCTAACTGATGGGTATTTTGGAGGCAAACCTCTCCCCCTTGAAGGTCCTCATAACGATCTTCTGGCACTGCCTTTTGACAAAGGTGCTGTACCTCCTCACAACAATGAAGGCAGAGAAATGCTTGCTTTGCCCTCTCTTGAATTTGTGGACTCTAGGATCTTGGCTCTCCCTAGTAGAGATGTTGGTAAACTGGACATCACAAGCTCAGTGGCTGAATCTATTACTAACTTCCCCATACAATCTCTTTTTGTATTTCTTCTCACCCTATTATCCATTCTGGGATATATCTTTCGTTTTCTGACTGGAAAACAGCGTAAACTGAAAGTTGTGGCTGAGGAAACTAAAGCGCAAGCAGGAGCTCCCAAAAAGAAGAAAACTCGAAGATTGGGAAATAATAAGAAGAATTTCAGTTATGAGAAAGACGCAAGAAATATGTCGTATGAATATAAGTTTGGTGAATCTAATGGACCTGCACATGGGGAAAGAAATGAAAAAAAATTGCTCTTGACCTCTTCTGATTTTATTGATCGTGACACCGAGGGACGTAGGATTGGCAAGTTACTTGTTTCCAGTAATGAAATTGCTAAGGGGAGTAACGGTACCATTGTACTTGAGGGTATCTATGATGGTCGTCCAGTAGCTGTTAAACGCCTTGTGCGAACTCATCATGATGTGGCTTTGAAAGAGATTCAGAATCTTATTGCGTCTGATCAGCATCCAAATATTGTCCGTTGGTATGGCGTGGAGCATGATCAAGATTTTGTCTATCTATCCTTGGAGCGCTGCTCATGTAGCTTAAATGACTTGATTTATTATTACTCAGAGTCTTCTCAAGGCCAAATTATCAACAAGGATGAGGATCCTCACTTTTTGGCCGAGTATCGCATTCAATTGCAGGCAATCATGGGAAAGAACAAGAATGTTGAATTGTGGAAGACAAATGGATACCCTTCACCCCAAATGTTAAAATTAATGAGTAAGTATTGTATAATGAGCAAGCTACTATGCATTCATTGCAAGATTTGTCTCGTATTCCCACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006983 GO:0006984 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010467 GO:0010506 GO:0010508 GO:0012505 GO:0014070 GO:0016020 GO:0016070 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031984 GO:0033554 GO:0034263 GO:0034641 GO:0034976 GO:0035966 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071216 GO:0071704 GO:0090304 GO:0098542 GO:0098827 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04140 ko04141 ko04210 ko04932 ko05010 map04140 map04141 map04210 map04932 map05010

Pfam Domains

Protein Families

PQQ Pkinase Ribonuc_2-5A

Protein Analysis

625

Amino Acids

69.52

Weight (kDa)

8.18

Isoelectric Point (pI)

36.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	470 - 550	7.5e-06	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24360 AT5G24360 AT5G24360
fragaria_vesca	FvH4_5g25750 FvH4_5g25750
malus_domestica	MD06G1007000.v1.1
prunus_persica	Prupe.5G008100_v2.0.a1 Prupe.5G008100_v2.0.a1 Prupe.5G008100_v2.0.a1
pyrus_communis	pycom02g08890 pycom06g00610
rosa_chinensis	RchiOBHm_Chr7g0216101
rosa_laevigata	RLG00000002594
rosa_multiflora	Rmu_co8312507.1_g000001 Rmu_sc0009767.1_g000002
rosa_roxburghii	Rroxscaffold_3G00243650
rosa_rugosa	Rorug07G0158900 Rorug07G0158900
rosa_samantha	Rh7AG295900 Rh7AG296000 Rh7BG288300 Rh7CG316300 Rh7DG298800
rosa_wichuraiana	Rw7G025170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1312
Acc65I	GGTACC	1 cut(s)	1433
AccB1I	GGYRCC	2 cut(s)	566, 1433
AccII	CGCG	1 cut(s)	789
AciI	CCGC	3 cut(s)	102, 108, 422
AclWI	GGATC	3 cut(s)	998, 1688, 1701
AcoI	YGGCCR	1 cut(s)	1707
AcsI	RAATTY	3 cut(s)	249, 974, 1237
AcuI	CTGAAG	4 cut(s)	101, 109, 522, 785
AfaI	GTAC	3 cut(s)	924, 1435, 1443
AfeI	AGCGCT	2 cut(s)	165, 1616
AfiI	CCNNNNNNNGG	4 cut(s)	44, 707, 875, 1310
AgeI	ACCGGT	1 cut(s)	563
AgsI	TTSAA	6 cut(s)	283, 875, 974, 1516, 1724, 1760
AjnI	CCWGG	1 cut(s)	724
AjuI	GAANNNNNNNTTGG	2 cut(s)	1269, 1301
AleI	CACNNNNGTG	1 cut(s)	470
AluBI	AGCT	8 cut(s)	121, 129, 542, 1038, 1193, 1475, 1629, 1834
AluI	AGCT	8 cut(s)	121, 129, 542, 1038, 1193, 1475, 1629, 1834
Alw21I	GWGCWC	1 cut(s)	1195
Alw26I	GTCTC	3 cut(s)	71, 277, 1865
AlwI	GGATC	3 cut(s)	998, 1688, 1701
AlwNI	CAGNNNCTG	2 cut(s)	1046, 1475
Ama87I	CYCGRG	1 cut(s)	605
Aor51HI	AGCGCT	2 cut(s)	165, 1616
AoxI	GGCC	4 cut(s)	228, 342, 1669, 1707
ApaI	GGGCCC	1 cut(s)	346
ApeKI	GCWGC	3 cut(s)	161, 628, 1617
ApoI	RAATTY	3 cut(s)	249, 974, 1237
AseI	ATTAAT	1 cut(s)	1805
AsiGI	ACCGGT	1 cut(s)	563
Asp700I	GAANNNNTTC	1 cut(s)	1238
Asp718I	GGTACC	1 cut(s)	1433
AspLEI	GCGC	4 cut(s)	113, 166, 1183, 1617
AspS9I	GGNCC	6 cut(s)	228, 342, 343, 722, 878, 1301
AsuHPI	GGTGA	6 cut(s)	25, 344, 536, 1087, 1301, 1779
AvaI	CYCGRG	1 cut(s)	605
AvaII	GGWCC	3 cut(s)	722, 878, 1301
BaeGI	GKGCMC	1 cut(s)	346
BaeI	ACNNNNGTAYC	2 cut(s)	1425, 1458
BamHI	GGATCC	1 cut(s)	1693
BanI	GGYRCC	2 cut(s)	566, 1433
BanII	GRGCYC	2 cut(s)	346, 1195
BbsI	GAAGAC	3 cut(s)	342, 1653, 1775
Bbv12I	GWGCWC	1 cut(s)	1195
BbvCI	CCTCAGC	1 cut(s)	1167
BbvI	GCAGC	3 cut(s)	173, 640, 1604
BccI	CCATC	4 cut(s)	208, 431, 836, 1454
BceAI	ACGGC	1 cut(s)	199
BciT130I	CCWGG	1 cut(s)	726
BciVI	GTATCC	1 cut(s)	1772
BclI	TGATCA	3 cut(s)	310, 1543, 1585
BcoDI	GTCTC	3 cut(s)	71, 277, 1865
BfaI	CTAG	3 cut(s)	425, 987, 1005
BfmI	CTRYAG	2 cut(s)	289, 626
BfoI	RGCGCY	3 cut(s)	114, 167, 1618
BfuAI	ACCTGC	1 cut(s)	1312
BfuI	GTATCC	1 cut(s)	1772
BisI	GCNGC	4 cut(s)	109, 162, 629, 1618
BlsI	GCNGC	4 cut(s)	110, 163, 630, 1619
Bme1390I	CCNGG	1 cut(s)	726
Bme18I	GGWCC	3 cut(s)	722, 878, 1301
BmeT110I	CYCGRG	1 cut(s)	605
BmgT120I	GGNCC	6 cut(s)	228, 342, 343, 722, 878, 1301
BmiI	GGNNCC	6 cut(s)	244, 344, 558, 568, 1435, 1695
BmrFI	CCNGG	1 cut(s)	726
BmrI	ACTGGG	1 cut(s)	349
BmsI	GCATC	3 cut(s)	148, 673, 1558
BmuI	ACTGGG	1 cut(s)	349
BpiI	GAAGAC	3 cut(s)	342, 1653, 1775
BplI	GAGNNNNNCTC	4 cut(s)	65, 97, 1604, 1636
Bpu10I	CCTNAGC	2 cut(s)	1167, 1419
BpuEI	CTTGAG	2 cut(s)	1466, 1650
BsaBI	GATNNNNATC	3 cut(s)	309, 1548, 1692
BsaI	GGTCTC	1 cut(s)	71
BsaJI	CCNNGG	6 cut(s)	72, 432, 570, 725, 1371, 1608
BsaWI	WCCGGW	2 cut(s)	494, 563
BsaXI	ACNNNNNCTCC	4 cut(s)	209, 239, 1417, 1447
Bsc4I	CCNNNNNNNGG	4 cut(s)	44, 707, 875, 1310
Bse118I	RCCGGY	2 cut(s)	104, 563
Bse1I	ACTGG	6 cut(s)	344, 597, 1029, 1141, 1404, 1469
Bse3DI	GCAATG	2 cut(s)	631, 1846
Bse8I	GATNNNNATC	3 cut(s)	309, 1548, 1692
BseBI	CCWGG	1 cut(s)	726
BseDI	CCNNGG	6 cut(s)	72, 432, 570, 725, 1371, 1608
BseGI	GGATG	3 cut(s)	442, 1549, 1693
BseJI	GATNNNNATC	3 cut(s)	309, 1548, 1692
BseLI	CCNNNNNNNGG	4 cut(s)	44, 707, 875, 1310
BseMI	GCAATG	2 cut(s)	631, 1846
BseMII	CTCAG	3 cut(s)	1053, 1158, 1668
BseNI	ACTGG	6 cut(s)	344, 597, 1029, 1141, 1404, 1469
BseRI	GAGGAG	3 cut(s)	89, 456, 918
BseSI	GKGCMC	1 cut(s)	346
BseXI	GCAGC	3 cut(s)	173, 640, 1604
BsgI	GTGCAG	2 cut(s)	129, 1290
Bsh1236I	CGCG	1 cut(s)	789
Bsh1285I	CGRYCG	1 cut(s)	11
BshFI	GGCC	4 cut(s)	230, 344, 1671, 1709
BshNI	GGYRCC	2 cut(s)	566, 1433
BshTI	ACCGGT	1 cut(s)	563
BsiEI	CGRYCG	1 cut(s)	11
BsiHKAI	GWGCWC	1 cut(s)	1195
BsiHKCI	CYCGRG	1 cut(s)	605
BsiSI	CCGG	3 cut(s)	105, 495, 564
BslFI	GGGAC	2 cut(s)	743, 1389
BslI	CCNNNNNNNGG	4 cut(s)	44, 707, 875, 1310
BsmAI	GTCTC	3 cut(s)	71, 277, 1865
BsmBI	CGTCTC	1 cut(s)	277
BsmFI	GGGAC	2 cut(s)	743, 1389
BsmI	GAATGC	2 cut(s)	1719, 1842
BsnI	GGCC	4 cut(s)	230, 344, 1671, 1709
Bso31I	GGTCTC	1 cut(s)	71
BsoBI	CYCGRG	1 cut(s)	605
Bsp120I	GGGCCC	1 cut(s)	342
Bsp1286I	GDGCHC	2 cut(s)	346, 1195
BspACI	CCGC	3 cut(s)	102, 108, 422
BspANI	GGCC	4 cut(s)	230, 344, 1671, 1709
BspCNI	CTCAG	3 cut(s)	1052, 1159, 1667
BspFNI	CGCG	1 cut(s)	789
BspHI	TCATGA	1 cut(s)	1501
BspLI	GGNNCC	6 cut(s)	244, 344, 558, 568, 1435, 1695
BspMAI	CTGCAG	2 cut(s)	293, 630
BspMI	ACCTGC	1 cut(s)	1312
BspPI	GGATC	3 cut(s)	998, 1688, 1701
BspQI	GCTCTTC	2 cut(s)	120, 128
BspT107I	GGYRCC	2 cut(s)	566, 1433
BspTNI	GGTCTC	1 cut(s)	71
BsrDI	GCAATG	2 cut(s)	631, 1846
BsrFI	RCCGGY	2 cut(s)	104, 563
BsrI	ACTGG	6 cut(s)	344, 597, 1029, 1141, 1404, 1469
BssAI	RCCGGY	2 cut(s)	104, 563
BssECI	CCNNGG	6 cut(s)	72, 432, 570, 725, 1371, 1608
BssT1I	CCWWGG	1 cut(s)	1608
Bst2UI	CCWGG	1 cut(s)	726
Bst4CI	ACNGT	6 cut(s)	387, 640, 754, 833, 1433, 1875
Bst6I	CTCTTC	5 cut(s)	120, 128, 138, 262, 1351
BstAPI	GCANNNNNTGC	1 cut(s)	1848
BstC8I	GCNNGC	5 cut(s)	106, 957, 1185, 1731, 1832
BstDEI	CTNAG	5 cut(s)	149, 1039, 1167, 1419, 1654
BstF5I	GGATG	3 cut(s)	442, 1549, 1693
BstFNI	CGCG	1 cut(s)	789
BstH2I	RGCGCY	3 cut(s)	114, 167, 1618
BstHHI	GCGC	4 cut(s)	113, 166, 1183, 1617
BstMAI	GTCTC	3 cut(s)	71, 277, 1865
BstMCI	CGRYCG	1 cut(s)	11
BstMWI	GCNNNNNNNGC	5 cut(s)	110, 485, 961, 1626, 1848
BstNI	CCWGG	1 cut(s)	726
BstSCI	CCNGG	1 cut(s)	724
BstSFI	CTRYAG	2 cut(s)	289, 626
BstSLI	GKGCMC	1 cut(s)	346
BstUI	CGCG	1 cut(s)	789
BstV1I	GCAGC	3 cut(s)	173, 640, 1604
BstV2I	GAAGAC	3 cut(s)	342, 1653, 1775
BstX2I	RGATCY	2 cut(s)	990, 1693
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstYI	RGATCY	2 cut(s)	990, 1693
BsuI	GTATCC	1 cut(s)	1772
BsuRI	GGCC	4 cut(s)	230, 344, 1671, 1709
BtsCI	GGATG	3 cut(s)	442, 1549, 1693
BtsI	GCAGTG	2 cut(s)	623, 899
BtsIMutI	CAGTG	5 cut(s)	623, 759, 899, 1047, 1871
BveI	ACCTGC	1 cut(s)	1312
Cac8I	GCNNGC	5 cut(s)	106, 957, 1185, 1731, 1832
CaiI	CAGNNNCTG	2 cut(s)	1046, 1475
CciI	TCATGA	1 cut(s)	1501
CfoI	GCGC	4 cut(s)	113, 166, 1183, 1617
Cfr10I	RCCGGY	2 cut(s)	104, 563
Cfr13I	GGNCC	6 cut(s)	228, 342, 343, 722, 878, 1301
CseI	GACGC	2 cut(s)	1265, 1527
Csp6I	GTAC	3 cut(s)	923, 1434, 1442
CspAI	ACCGGT	1 cut(s)	563
CspCI	CAANNNNNGTGG	2 cut(s)	1023, 1058
CviAII	CATG	5 cut(s)	1310, 1502, 1583, 1623, 1738
CviQI	GTAC	3 cut(s)	923, 1434, 1442
DdeI	CTNAG	5 cut(s)	149, 1039, 1167, 1419, 1654
EaeI	YGGCCR	1 cut(s)	1707
Eam1104I	CTCTTC	5 cut(s)	120, 128, 138, 262, 1351
EarI	CTCTTC	5 cut(s)	120, 128, 138, 262, 1351
EciI	GGCGGA	1 cut(s)	91
Ecl136II	GAGCTC	1 cut(s)	1193
Eco130I	CCWWGG	1 cut(s)	1608
Eco24I	GRGCYC	2 cut(s)	346, 1195
Eco31I	GGTCTC	1 cut(s)	71
Eco32I	GATATC	1 cut(s)	698
Eco47I	GGWCC	3 cut(s)	722, 878, 1301
Eco47III	AGCGCT	2 cut(s)	165, 1616
Eco53kI	GAGCTC	1 cut(s)	1193
Eco57I	CTGAAG	4 cut(s)	101, 109, 522, 785
Eco88I	CYCGRG	1 cut(s)	605
EcoICRI	GAGCTC	1 cut(s)	1193
EcoO109I	RGGNCCY	2 cut(s)	343, 878
EcoRI	GAATTC	1 cut(s)	249
EcoRII	CCWGG	1 cut(s)	724
EcoRV	GATATC	1 cut(s)	698
EcoT14I	CCWWGG	1 cut(s)	1608
EcoT22I	ATGCAT	1 cut(s)	1844
EcoT38I	GRGCYC	2 cut(s)	346, 1195
ErhI	CCWWGG	1 cut(s)	1608
Esp3I	CGTCTC	1 cut(s)	277
FaeI	CATG	5 cut(s)	1313, 1505, 1586, 1626, 1741
FaqI	GGGAC	2 cut(s)	743, 1389
FatI	CATG	5 cut(s)	1309, 1501, 1582, 1622, 1737
FbaI	TGATCA	3 cut(s)	310, 1543, 1585
Fnu4HI	GCNGC	4 cut(s)	109, 162, 629, 1618
FokI	GGATG	3 cut(s)	449, 1536, 1700
FriOI	GRGCYC	2 cut(s)	346, 1195
Fsp4HI	GCNGC	4 cut(s)	109, 162, 629, 1618
FspBI	CTAG	3 cut(s)	425, 987, 1005
GlaI	GCGC	4 cut(s)	112, 165, 1182, 1616
GluI	GCNGC	4 cut(s)	109, 162, 629, 1618
HaeII	RGCGCY	3 cut(s)	114, 167, 1618
HaeIII	GGCC	4 cut(s)	230, 344, 1671, 1709
HapII	CCGG	3 cut(s)	105, 495, 564
HgaI	GACGC	2 cut(s)	1265, 1527
HhaI	GCGC	4 cut(s)	113, 166, 1183, 1617
Hin1II	CATG	5 cut(s)	1313, 1505, 1586, 1626, 1741
Hin6I	GCGC	4 cut(s)	111, 164, 1181, 1615
HinP1I	GCGC	4 cut(s)	111, 164, 1181, 1615
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HinfI	GANTC	9 cut(s)	98, 444, 812, 983, 1049, 1292, 1522, 1528, 1658
HpaII	CCGG	3 cut(s)	105, 495, 564
HphI	GGTGA	6 cut(s)	25, 344, 536, 1087, 1301, 1779
Hpy166II	GTNNAC	4 cut(s)	202, 982, 1022, 1151
Hpy188I	TCNGA	8 cut(s)	267, 433, 765, 1134, 1351, 1527, 1543, 1657
Hpy188III	TCNNGA	9 cut(s)	246, 588, 605, 607, 971, 1339, 1364, 1502, 1589
Hpy8I	GTNNAC	4 cut(s)	202, 982, 1022, 1151
Hpy99I	CGWCG	1 cut(s)	394
HpyAV	CCTTC	6 cut(s)	32, 546, 760, 869, 935, 1794
HpyCH4III	ACNGT	6 cut(s)	387, 640, 754, 833, 1433, 1875
HpyCH4IV	ACGT	2 cut(s)	270, 1378
HpyF10VI	GCNNNNNNNGC	5 cut(s)	110, 485, 961, 1626, 1848
HpyF3I	CTNAG	5 cut(s)	149, 1039, 1167, 1419, 1654
HpySE526I	ACGT	2 cut(s)	270, 1378
Hsp92II	CATG	5 cut(s)	1313, 1505, 1586, 1626, 1741
HspAI	GCGC	4 cut(s)	111, 164, 1181, 1615
KpnI	GGTACC	1 cut(s)	1437
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	3 cut(s)	310, 1543, 1585
LguI	GCTCTTC	2 cut(s)	120, 128
LmnI	GCTCC	5 cut(s)	40, 1190, 1198, 1579, 1612
Lsp1109I	GCAGC	3 cut(s)	173, 640, 1604
LweI	GCATC	3 cut(s)	148, 673, 1558
MaeI	CTAG	3 cut(s)	425, 987, 1005
MaeII	ACGT	2 cut(s)	270, 1378
MaeIII	GTNAC	7 cut(s)	172, 353, 445, 490, 1364, 1392, 1427
MfeI	CAATTG	1 cut(s)	1724
MflI	RGATCY	2 cut(s)	990, 1693
MhlI	GDGCHC	2 cut(s)	346, 1195
MlyI	GAGTC	3 cut(s)	453, 977, 1667
MmeI	TCCRAC	1 cut(s)	558
Mph1103I	ATGCAT	1 cut(s)	1844
MreI	CGCCGGCG	1 cut(s)	104
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	1238
MseI	TTAA	5 cut(s)	483, 1479, 1631, 1799, 1805
MslI	CAYNNNNRTG	3 cut(s)	470, 936, 1503
MspI	CCGG	3 cut(s)	105, 495, 564
MspR9I	CCNGG	1 cut(s)	726
MunI	CAATTG	1 cut(s)	1724
Mva1269I	GAATGC	2 cut(s)	1719, 1842
MvaI	CCWGG	1 cut(s)	726
MvnI	CGCG	1 cut(s)	789
MwoI	GCNNNNNNNGC	5 cut(s)	110, 485, 961, 1626, 1848
NaeI	GCCGGC	1 cut(s)	106
NgoMIV	GCCGGC	1 cut(s)	104
NlaIII	CATG	5 cut(s)	1313, 1505, 1586, 1626, 1741
NlaIV	GGNNCC	6 cut(s)	244, 344, 558, 568, 1435, 1695
NmeAIII	GCCGAG	3 cut(s)	97, 595, 1735
NmuCI	GTSAC	5 cut(s)	172, 353, 445, 490, 1364
NsiI	ATGCAT	1 cut(s)	1844
OliI	CACNNNNGTG	1 cut(s)	470
PaeR7I	CTCGAG	1 cut(s)	605
PagI	TCATGA	1 cut(s)	1501
PciSI	GCTCTTC	2 cut(s)	120, 128
PcsI	WCGNNNNNNNCGW	2 cut(s)	51, 1489
PctI	GAATGC	2 cut(s)	1719, 1842
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	1 cut(s)	1238
PfeI	GAWTC	6 cut(s)	98, 812, 1049, 1292, 1522, 1528
PinAI	ACCGGT	1 cut(s)	563
PkrI	GCNGC	4 cut(s)	110, 163, 630, 1619
Ple19I	CGATCG	1 cut(s)	11
PleI	GAGTC	3 cut(s)	452, 977, 1666
PpsI	GAGTC	3 cut(s)	452, 977, 1666
PpuMI	RGGWCCY	1 cut(s)	878
PshBI	ATTAAT	1 cut(s)	1805
Psp124BI	GAGCTC	1 cut(s)	1195
Psp5II	RGGWCCY	1 cut(s)	878
Psp6I	CCWGG	1 cut(s)	724
PspGI	CCWGG	1 cut(s)	724
PspN4I	GGNNCC	6 cut(s)	244, 344, 558, 568, 1435, 1695
PspOMI	GGGCCC	1 cut(s)	342
PspPI	GGNCC	6 cut(s)	228, 342, 343, 722, 878, 1301
PspPPI	RGGWCCY	1 cut(s)	878
PstI	CTGCAG	2 cut(s)	293, 630
PstNI	CAGNNNCTG	2 cut(s)	1046, 1475
PsuI	RGATCY	2 cut(s)	990, 1693
PvuI	CGATCG	1 cut(s)	11
RsaI	GTAC	3 cut(s)	924, 1435, 1443
RsaNI	GTAC	3 cut(s)	923, 1434, 1442
RseI	CAYNNNNRTG	3 cut(s)	470, 936, 1503
SacI	GAGCTC	1 cut(s)	1195
SapI	GCTCTTC	2 cut(s)	120, 128
SaqAI	TTAA	5 cut(s)	483, 1479, 1631, 1799, 1805
SatI	GCNGC	4 cut(s)	109, 162, 629, 1618
Sau96I	GGNCC	6 cut(s)	228, 342, 343, 722, 878, 1301
SchI	GAGTC	3 cut(s)	453, 977, 1667
ScrFI	CCNGG	1 cut(s)	726
SduI	GDGCHC	2 cut(s)	346, 1195
SfaNI	GCATC	3 cut(s)	148, 673, 1558
SfcI	CTRYAG	2 cut(s)	289, 626
Sfr274I	CTCGAG	1 cut(s)	605
SgrAI	CRCCGGYG	2 cut(s)	104, 563
SinI	GGWCC	3 cut(s)	722, 878, 1301
SlaI	CTCGAG	1 cut(s)	605
SmiMI	CAYNNNNRTG	3 cut(s)	470, 936, 1503
SmlI	CTYRAG	3 cut(s)	605, 1445, 1665
SmoI	CTYRAG	3 cut(s)	605, 1445, 1665
SsiI	CCGC	3 cut(s)	102, 108, 422
SspI	AATATT	1 cut(s)	1558
SspMI	CTAG	3 cut(s)	425, 987, 1005
SstI	GAGCTC	1 cut(s)	1195
StyD4I	CCNGG	1 cut(s)	724
StyI	CCWWGG	1 cut(s)	1608
TaaI	ACNGT	6 cut(s)	387, 640, 754, 833, 1433, 1875
TaiI	ACGT	2 cut(s)	273, 1381
TaqI	TCGA	4 cut(s)	392, 606, 694, 1213
TatI	WGTACW	1 cut(s)	1441
TauI	GCSGC	1 cut(s)	111
TfiI	GAWTC	6 cut(s)	98, 812, 1049, 1292, 1522, 1528
Tru1I	TTAA	5 cut(s)	483, 1479, 1631, 1799, 1805
Tru9I	TTAA	5 cut(s)	483, 1479, 1631, 1799, 1805
TscAI	CASTG	5 cut(s)	630, 759, 906, 1047, 1878
TseFI	GTSAC	5 cut(s)	172, 353, 445, 490, 1364
TseI	GCWGC	3 cut(s)	161, 628, 1617
Tsp45I	GTSAC	5 cut(s)	172, 353, 445, 490, 1364
TspDTI	ATGAA	6 cut(s)	310, 954, 1290, 1338, 1425, 1835
TspGWI	ACGGA	1 cut(s)	1553
TspRI	CASTG	5 cut(s)	630, 759, 906, 1047, 1878
VpaK11BI	GGWCC	3 cut(s)	722, 878, 1301
VspI	ATTAAT	1 cut(s)	1805
XapI	RAATTY	3 cut(s)	249, 974, 1237
XhoI	CTCGAG	1 cut(s)	605
XmnI	GAANNNNTTC	1 cut(s)	1238
XspI	CTAG	3 cut(s)	425, 987, 1005
Zsp2I	ATGCAT	1 cut(s)	1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.